View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0682_high_17 (Length: 258)
Name: NF0682_high_17
Description: NF0682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0682_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5057217 - 5056982
Alignment:
| Q |
1 |
caactctccatgtaggacacttaagcagagtcactgctttggtacatgaactagaagtttcctataagtcctatgcacataataaagaagatagtgcaga |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5057217 |
caactctccatgtaggacacttaagcagagtcactgctttggtacatgaactagaagtttcctataagtcctatgcacataataaagaagatagtgcaga |
5057118 |
T |
|
| Q |
101 |
taaagaagataggtttaacctgtcaaaaacatcaaactcagctcagtgcagatgtaaattttaacagtttaacataaagagagaaagttgaaatcataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5057117 |
taaagaagataggtttaacctgtcaaaaacatcaaactcagctcagtgcagatgtaaattttaacagtttaacataaagagagaaagttgaaatcataaa |
5057018 |
T |
|
| Q |
201 |
aaacataatactaaacaaataaacttacttgatgat |
236 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
5057017 |
aaacataatactaaacaaataaacttacttgatgat |
5056982 |
T |
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