View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0682_low_39 (Length: 254)

Name: NF0682_low_39
Description: NF0682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0682_low_39
NF0682_low_39
[»] chr3 (36 HSPs)
chr3 (4-245)||(16638504-16638745)
chr3 (4-245)||(15345403-15345644)
chr3 (4-245)||(10008331-10008572)
chr3 (4-245)||(20059212-20059453)
chr3 (4-245)||(10908941-10909182)
chr3 (4-245)||(12889440-12889681)
chr3 (4-245)||(43165406-43165647)
chr3 (4-245)||(48428178-48428419)
chr3 (10-245)||(26790571-26790806)
chr3 (10-245)||(5422088-5422323)
chr3 (10-244)||(15713215-15713449)
chr3 (4-245)||(16753859-16754100)
chr3 (4-245)||(13255421-13255662)
chr3 (4-245)||(53382176-53382417)
chr3 (4-242)||(3688674-3688912)
chr3 (4-242)||(15586553-15586791)
chr3 (12-245)||(6603474-6603707)
chr3 (22-242)||(15399679-15399898)
chr3 (10-242)||(24185927-24186159)
chr3 (13-186)||(15358823-15358996)
chr3 (128-245)||(5110567-5110684)
chr3 (4-233)||(16804117-16804346)
chr3 (12-242)||(23414951-23415181)
chr3 (4-233)||(16694895-16695124)
chr3 (41-242)||(11861121-11861322)
chr3 (4-240)||(15065802-15066038)
chr3 (4-240)||(23079180-23079416)
chr3 (187-245)||(6596969-6597027)
chr3 (148-233)||(12501808-12501893)
chr3 (4-68)||(14873903-14873967)
chr3 (59-107)||(28757115-28757163)
chr3 (4-67)||(14578744-14578807)
chr3 (202-245)||(17497620-17497663)
chr3 (200-242)||(14873746-14873788)
chr3 (10-67)||(15262367-15262424)
chr3 (202-242)||(10408907-10408947)
[»] chr5 (28 HSPs)
chr5 (4-245)||(19773004-19773245)
chr5 (4-242)||(41773886-41774124)
chr5 (10-245)||(22329988-22330223)
chr5 (4-245)||(16359546-16359787)
chr5 (4-245)||(27521450-27521691)
chr5 (4-245)||(27613400-27613641)
chr5 (4-245)||(34569538-34569779)
chr5 (13-245)||(14996840-14997072)
chr5 (10-245)||(27682501-27682736)
chr5 (10-242)||(22137718-22137950)
chr5 (4-245)||(40711824-40712065)
chr5 (4-226)||(27665610-27665832)
chr5 (10-244)||(37288598-37288832)
chr5 (10-244)||(29473175-29473409)
chr5 (13-242)||(22350972-22351201)
chr5 (4-242)||(18782158-18782396)
chr5 (43-242)||(20803680-20803879)
chr5 (4-231)||(23461015-23461242)
chr5 (40-122)||(21882854-21882936)
chr5 (16-242)||(23526107-23526333)
chr5 (12-113)||(25429473-25429574)
chr5 (200-245)||(25429660-25429705)
chr5 (10-67)||(26736006-26736063)
chr5 (4-118)||(21332214-21332328)
chr5 (200-242)||(21883015-21883057)
chr5 (200-242)||(22505901-22505943)
chr5 (202-242)||(14884095-14884135)
chr5 (59-123)||(20345363-20345427)
[»] chr2 (28 HSPs)
chr2 (4-245)||(24712777-24713018)
chr2 (10-245)||(24265119-24265354)
chr2 (4-242)||(22322804-22323042)
chr2 (4-245)||(9338325-9338566)
chr2 (4-245)||(9486959-9487200)
chr2 (4-245)||(16983983-16984224)
chr2 (4-245)||(44383029-44383270)
chr2 (4-245)||(10871593-10871834)
chr2 (4-245)||(27374012-27374253)
chr2 (4-245)||(17001743-17001984)
chr2 (13-242)||(24874212-24874441)
chr2 (13-244)||(21139441-21139672)
chr2 (45-244)||(23116519-23116718)
chr2 (4-242)||(23205057-23205295)
chr2 (4-242)||(23676661-23676899)
chr2 (4-242)||(24704944-24705182)
chr2 (4-242)||(22462943-22463181)
chr2 (4-242)||(11351173-11351411)
chr2 (13-119)||(23105312-23105419)
chr2 (4-122)||(22742548-22742666)
chr2 (4-233)||(24657129-24657358)
chr2 (16-226)||(23028939-23029149)
chr2 (4-242)||(24678230-24678468)
chr2 (4-92)||(21322878-21322966)
chr2 (10-113)||(23065162-23065265)
chr2 (10-113)||(23074612-23074715)
chr2 (22-113)||(22733365-22733456)
chr2 (200-242)||(21320465-21320507)
[»] chr7 (18 HSPs)
chr7 (10-245)||(15157985-15158220)
chr7 (10-245)||(13689148-13689383)
chr7 (4-245)||(18180844-18181085)
chr7 (4-245)||(8710706-8710947)
chr7 (10-244)||(11234142-11234376)
chr7 (4-245)||(14335497-14335738)
chr7 (4-244)||(18587100-18587340)
chr7 (4-245)||(44788279-44788520)
chr7 (10-242)||(11550033-11550265)
chr7 (10-242)||(12690608-12690840)
chr7 (47-242)||(14957652-14957847)
chr7 (94-245)||(10873653-10873803)
chr7 (4-233)||(11984093-11984322)
chr7 (4-245)||(9591465-9591706)
chr7 (4-239)||(16726375-16726610)
chr7 (4-239)||(17703389-17703624)
chr7 (59-123)||(12459785-12459849)
chr7 (202-242)||(26115499-26115539)
[»] chr6 (25 HSPs)
chr6 (4-245)||(24292846-24293087)
chr6 (4-245)||(27205598-27205839)
chr6 (4-245)||(27243389-27243630)
chr6 (4-245)||(29589503-29589744)
chr6 (10-244)||(2871867-2872101)
chr6 (4-245)||(28312606-28312847)
chr6 (4-245)||(16574866-16575107)
chr6 (4-245)||(16620273-16620514)
chr6 (13-242)||(25115537-25115766)
chr6 (4-245)||(28260261-28260502)
chr6 (4-245)||(28285414-28285655)
chr6 (4-245)||(28339010-28339251)
chr6 (13-242)||(22829453-22829682)
chr6 (12-242)||(5836295-5836525)
chr6 (4-242)||(25756682-25756920)
chr6 (4-233)||(27559045-27559274)
chr6 (4-242)||(22436845-22437083)
chr6 (13-119)||(19867672-19867778)
chr6 (24-241)||(18405012-18405229)
chr6 (10-82)||(16924867-16924939)
chr6 (59-123)||(10466034-10466098)
chr6 (200-242)||(21764984-21765026)
chr6 (4-119)||(23081399-23081514)
chr6 (73-107)||(24367445-24367479)
chr6 (202-242)||(21474774-21474814)
[»] chr4 (23 HSPs)
chr4 (4-245)||(27714448-27714689)
chr4 (10-245)||(8050282-8050517)
chr4 (4-245)||(12479712-12479953)
chr4 (4-245)||(17091808-17092049)
chr4 (4-245)||(23958859-23959100)
chr4 (4-245)||(19775452-19775693)
chr4 (10-245)||(14300638-14300873)
chr4 (4-245)||(8389524-8389765)
chr4 (10-245)||(16233651-16233886)
chr4 (10-245)||(19635254-19635489)
chr4 (13-242)||(40476161-40476390)
chr4 (12-242)||(14683687-14683917)
chr4 (4-245)||(13513462-13513703)
chr4 (4-182)||(16250572-16250750)
chr4 (31-118)||(14162609-14162696)
chr4 (4-118)||(16219300-16219414)
chr4 (4-118)||(16222620-16222734)
chr4 (4-242)||(18604481-18604719)
chr4 (141-242)||(18224135-18224236)
chr4 (14-119)||(15144677-15144782)
chr4 (13-119)||(15820-15926)
chr4 (4-68)||(18224282-18224346)
chr4 (202-242)||(15073669-15073709)
[»] chr1 (23 HSPs)
chr1 (4-245)||(21833429-21833670)
chr1 (4-245)||(33388020-33388261)
chr1 (4-245)||(51330483-51330724)
chr1 (4-245)||(41350659-41350900)
chr1 (4-242)||(16347589-16347827)
chr1 (10-242)||(21842345-21842577)
chr1 (13-242)||(22400456-22400685)
chr1 (10-237)||(19109501-19109728)
chr1 (4-242)||(24784851-24785089)
chr1 (4-241)||(22435728-22435965)
chr1 (4-119)||(22496373-22496488)
chr1 (4-242)||(21228550-21228788)
chr1 (10-233)||(17042018-17042241)
chr1 (37-122)||(20081490-20081575)
chr1 (4-119)||(21176555-21176670)
chr1 (10-113)||(22401725-22401828)
chr1 (200-242)||(20074703-20074745)
chr1 (13-119)||(21752183-21752289)
chr1 (72-107)||(37680275-37680310)
chr1 (200-242)||(20081370-20081412)
chr1 (22-119)||(16379239-16379336)
chr1 (202-242)||(24096609-24096649)
chr1 (59-123)||(24096728-24096792)
[»] chr8 (21 HSPs)
chr8 (4-245)||(20015625-20015866)
chr8 (4-245)||(17671384-17671625)
chr8 (4-245)||(19481434-19481675)
chr8 (4-243)||(22117539-22117778)
chr8 (4-245)||(19115578-19115819)
chr8 (4-244)||(22126322-22126562)
chr8 (10-245)||(18859761-18859996)
chr8 (4-233)||(22031281-22031509)
chr8 (4-233)||(22043005-22043234)
chr8 (4-239)||(30310512-30310747)
chr8 (10-239)||(32603329-32603558)
chr8 (4-242)||(15536561-15536799)
chr8 (4-122)||(19981145-19981263)
chr8 (4-122)||(21164023-21164141)
chr8 (10-113)||(18881151-18881254)
chr8 (10-113)||(21391355-21391458)
chr8 (10-113)||(21780681-21780784)
chr8 (22-119)||(22523706-22523803)
chr8 (202-242)||(16268589-16268629)
chr8 (202-242)||(28984287-28984327)
chr8 (59-123)||(29300910-29300974)
[»] scaffold0055 (1 HSPs)
scaffold0055 (4-245)||(22388-22629)
[»] scaffold0052 (1 HSPs)
scaffold0052 (4-245)||(7377-7618)
[»] scaffold0044 (2 HSPs)
scaffold0044 (10-244)||(3571-3805)
scaffold0044 (4-242)||(17301-17539)
[»] scaffold0028 (3 HSPs)
scaffold0028 (4-242)||(11610-11848)
scaffold0028 (4-242)||(21138-21376)
scaffold0028 (4-239)||(55145-55380)
[»] scaffold0431 (1 HSPs)
scaffold0431 (13-242)||(10518-10747)
[»] scaffold0109 (2 HSPs)
scaffold0109 (13-242)||(41305-41534)
scaffold0109 (4-239)||(13052-13287)
[»] scaffold0789 (1 HSPs)
scaffold0789 (10-239)||(85-314)
[»] scaffold0259 (1 HSPs)
scaffold0259 (13-242)||(8408-8637)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-242)||(424455-424687)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-235)||(48806-49037)
[»] scaffold1881 (1 HSPs)
scaffold1881 (4-242)||(405-643)
[»] scaffold0550 (1 HSPs)
scaffold0550 (4-242)||(10083-10321)
[»] scaffold0177 (2 HSPs)
scaffold0177 (4-242)||(14966-15204)
scaffold0177 (10-242)||(11281-11513)
[»] scaffold0546 (1 HSPs)
scaffold0546 (4-239)||(20-255)
[»] scaffold0130 (1 HSPs)
scaffold0130 (4-239)||(7707-7942)
[»] scaffold0080 (5 HSPs)
scaffold0080 (4-239)||(10167-10401)
scaffold0080 (4-239)||(12822-13056)
scaffold0080 (4-242)||(32020-32258)
scaffold0080 (4-169)||(37486-37651)
scaffold0080 (22-119)||(54796-54893)
[»] scaffold0451 (1 HSPs)
scaffold0451 (4-242)||(13957-14195)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-233)||(171259-171488)
[»] scaffold0008 (2 HSPs)
scaffold0008 (14-230)||(1-217)
scaffold0008 (138-230)||(139547-139639)
[»] scaffold0079 (1 HSPs)
scaffold0079 (4-242)||(36639-36877)
[»] scaffold2059 (1 HSPs)
scaffold2059 (4-233)||(703-932)
[»] scaffold0009 (2 HSPs)
scaffold0009 (10-242)||(229777-230009)
scaffold0009 (205-242)||(251961-251998)
[»] scaffold0285 (1 HSPs)
scaffold0285 (4-242)||(5139-5377)
[»] scaffold0412 (1 HSPs)
scaffold0412 (4-233)||(15513-15742)
[»] scaffold0081 (2 HSPs)
scaffold0081 (4-242)||(21745-21983)
scaffold0081 (4-242)||(37169-37407)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-242)||(14565-14803)
[»] scaffold0993 (1 HSPs)
scaffold0993 (13-122)||(1132-1241)
[»] scaffold0289 (1 HSPs)
scaffold0289 (98-245)||(23-170)
[»] scaffold0358 (1 HSPs)
scaffold0358 (10-112)||(9094-9196)
[»] scaffold0278 (1 HSPs)
scaffold0278 (13-119)||(3701-3807)
[»] scaffold0273 (2 HSPs)
scaffold0273 (4-122)||(181-299)
scaffold0273 (200-242)||(377-419)
[»] scaffold0305 (1 HSPs)
scaffold0305 (10-231)||(3011-3232)
[»] scaffold0120 (3 HSPs)
scaffold0120 (13-110)||(14234-14331)
scaffold0120 (202-245)||(11602-11645)
scaffold0120 (22-110)||(11423-11510)
[»] scaffold0114 (1 HSPs)
scaffold0114 (4-244)||(17272-17512)
[»] scaffold0042 (1 HSPs)
scaffold0042 (4-136)||(36851-36983)
[»] scaffold0084 (1 HSPs)
scaffold0084 (10-113)||(8370-8473)
[»] scaffold0022 (3 HSPs)
scaffold0022 (4-119)||(41773-41888)
scaffold0022 (4-119)||(75493-75608)
scaffold0022 (14-119)||(34763-34868)
[»] scaffold0017 (2 HSPs)
scaffold0017 (31-122)||(194883-194974)
scaffold0017 (4-233)||(17000-17229)
[»] scaffold0198 (1 HSPs)
scaffold0198 (13-123)||(30437-30547)
[»] scaffold0023 (2 HSPs)
scaffold0023 (4-242)||(30499-30737)
scaffold0023 (73-119)||(43501-43547)
[»] scaffold0403 (1 HSPs)
scaffold0403 (10-119)||(15058-15167)
[»] scaffold0423 (1 HSPs)
scaffold0423 (4-119)||(2311-2426)
[»] scaffold0297 (2 HSPs)
scaffold0297 (4-119)||(7705-7820)
scaffold0297 (200-242)||(7582-7624)
[»] scaffold0819 (1 HSPs)
scaffold0819 (40-242)||(291-493)
[»] scaffold0501 (2 HSPs)
scaffold0501 (13-95)||(74-156)
scaffold0501 (200-242)||(261-303)
[»] scaffold0411 (1 HSPs)
scaffold0411 (10-119)||(8557-8667)
[»] scaffold0333 (1 HSPs)
scaffold0333 (13-119)||(18800-18906)
[»] scaffold0540 (1 HSPs)
scaffold0540 (10-119)||(10928-11037)
[»] scaffold0040 (1 HSPs)
scaffold0040 (4-113)||(110961-111070)
[»] scaffold0102 (1 HSPs)
scaffold0102 (14-122)||(50390-50498)
[»] scaffold0621 (2 HSPs)
scaffold0621 (37-119)||(191-273)
scaffold0621 (37-119)||(4608-4690)
[»] scaffold0410 (1 HSPs)
scaffold0410 (4-233)||(282-511)
[»] scaffold0324 (1 HSPs)
scaffold0324 (14-119)||(2140-2245)
[»] scaffold0218 (1 HSPs)
scaffold0218 (10-113)||(24766-24869)
[»] scaffold1459 (2 HSPs)
scaffold1459 (147-233)||(1026-1112)
scaffold1459 (4-62)||(1137-1195)
[»] scaffold0270 (2 HSPs)
scaffold0270 (4-118)||(7014-7128)
scaffold0270 (4-118)||(14144-14258)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-110)||(23590-23696)
scaffold0011 (69-122)||(153698-153751)
[»] scaffold0575 (1 HSPs)
scaffold0575 (4-113)||(7798-7907)
[»] scaffold0181 (1 HSPs)
scaffold0181 (4-233)||(28862-29091)
[»] scaffold1220 (1 HSPs)
scaffold1220 (130-242)||(3-115)
[»] scaffold0319 (1 HSPs)
scaffold0319 (10-110)||(1179-1279)
[»] scaffold0476 (1 HSPs)
scaffold0476 (37-119)||(10960-11042)
[»] scaffold0413 (1 HSPs)
scaffold0413 (13-111)||(3692-3790)
[»] scaffold0122 (1 HSPs)
scaffold0122 (24-110)||(40564-40650)
[»] scaffold0075 (1 HSPs)
scaffold0075 (13-119)||(55518-55624)
[»] scaffold0207 (1 HSPs)
scaffold0207 (71-119)||(4603-4651)
[»] scaffold1423 (1 HSPs)
scaffold1423 (202-245)||(300-343)
[»] scaffold0611 (1 HSPs)
scaffold0611 (202-245)||(9365-9408)
[»] scaffold0490 (1 HSPs)
scaffold0490 (10-113)||(38-141)
[»] scaffold0064 (1 HSPs)
scaffold0064 (40-119)||(69469-69548)
[»] scaffold1845 (1 HSPs)
scaffold1845 (200-242)||(1229-1271)
[»] scaffold0020 (1 HSPs)
scaffold0020 (202-244)||(176326-176368)
[»] scaffold0001 (1 HSPs)
scaffold0001 (200-242)||(514278-514320)
[»] scaffold0106 (1 HSPs)
scaffold0106 (202-239)||(34676-34713)
[»] scaffold1517 (1 HSPs)
scaffold1517 (59-123)||(1531-1595)
[»] scaffold0243 (1 HSPs)
scaffold0243 (37-113)||(23999-24075)
[»] scaffold0034 (1 HSPs)
scaffold0034 (201-233)||(122110-122142)
[»] scaffold0026 (1 HSPs)
scaffold0026 (202-242)||(51990-52030)


Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 16638504 - 16638745
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16638504 tcattttctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccgttgc 16638603  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  16638604 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccgggcacacttcttgatttcttcagggcagacgttgct 16638703  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16638704 cttgtggcctttctcaccacaattgaaacacacaatctctgc 16638745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 15345644 - 15345403
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15345644 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 15345545  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15345544 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 15345445  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  15345444 tttgtggcctttctcaccacaattgaaacacacaatctctgc 15345403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 10008331 - 10008572
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  10008331 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 10008430  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10008431 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 10008530  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  10008531 tttgtggcctttctcaccacaattgaaacacacaatctctgc 10008572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 20059453 - 20059212
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  20059453 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 20059354  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20059353 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 20059254  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  20059253 tttgtggcctttctcaccacaattgaaacacacaatctctgc 20059212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 10908941 - 10909182
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  10908941 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgggaactaatgtgaccctctccgttgc 10909040  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10909041 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 10909140  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  10909141 tttgtggcctttctcaccacaattgaaacacacaatctctgc 10909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 12889440 - 12889681
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12889440 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 12889539  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12889540 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 12889639  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12889640 cttgtggcctttctcaccacaattgaaacacacaatctctgc 12889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 43165406 - 43165647
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43165406 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 43165505  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  43165506 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 43165605  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43165606 cttgtggcctttctcaccacaattgaaacacacaatctctgc 43165647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 48428178 - 48428419
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48428178 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 48428277  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48428278 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 48428377  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  48428378 cttgtggcctttctcaccacaattgaaacacacaatctctgc 48428419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 26790806 - 26790571
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  26790806 tctgtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccgtcttaggctgagtacactgtgaactaatgtgaccctctccgttgcaattaa 26790707  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  26790706 agcacacaacgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggtagacgttgctcttgtg 26790607  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  26790606 gcctttctcaccacaattgaaacacacaatctctgc 26790571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 5422323 - 5422088
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  5422323 tctgtctgagtcccagtcaaagcgaaaaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccattgcaattaa 5422224  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||    
T  5422223 agcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttactcttgtg 5422124  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5422123 gcctttctcaccacaattgaagcacacaatctctgc 5422088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 15713449 - 15713215
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  15713449 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctaagtacactgtgaactaatgtgaccctctccattgcagttaa 15713350  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  15713349 aacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtg 15713250  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    |||||||||||||||||||||||||||||||||||    
T  15713249 gcctttctcaccacaattgaaacacacaatctctg 15713215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 16754100 - 16753859
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||    
T  16754100 tcattttctgtctgagtcccagtcaaagcgaaaaccctaccagtagtcggcgccctcttaggctgagtacattgagaactaatgtgaccctctccattgc 16754001  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||| || ||||    
T  16754000 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacccttcttaccacaccagacacacttcttgatttcctcaggacaggcgttgct 16753901  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  16753900 cttgtggcctttctcaccacaattgaagcacacaatctctgc 16753859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 13255421 - 13255662
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  13255421 tcattctctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccgttgc 13255520  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||  || ||||    
T  13255521 aattaaagcaaacaatgtctgtacggttgcaatcagctaccacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaagcgttgct 13255620  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  13255621 cttgtggcctttctcaccacaattgaagcacacaatctctgc 13255662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 53382417 - 53382176
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  53382417 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccctctgcattgc 53382318  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||||||| |||| ||||||||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  53382317 aattaaagcacacagtgtctgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacagacgttgct 53382218  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  53382217 cttgtggcctttctcgccacagttgaagcacacaatctctgc 53382176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 3688674 - 3688912
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  3688674 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcaccctcttaggctgagtacactgagaactaatgtgaccttctccattgc 3688773  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||||||||||||||| | |||||| |||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||| || ||||    
T  3688774 agttaaagcacacaatgtctgcacgattacaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgct 3688873  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  3688874 cttgtggcctttctcaccacaattgaagcacacaatctc 3688912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 15586791 - 15586553
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15586791 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 15586692  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||  ||| || ||||    
T  15586691 aattaaagcaaacaatgtctgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgct 15586592  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  15586591 cttgtggcctttctcaccacaattgaagcacacaatctc 15586553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 6603474 - 6603707
Alignment:
Q  12 tgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    |||||| |||||||||| ||| || || |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  6603474 tgtctgggtcccagtcaaagcgaaaaccctaccagtagtcggcgccctcttaggctgagtacactgagagctaatgtgaccctctccattgcaattaaag 6603573  T
Q  112 cacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggc 211  Q
    ||||||||||| ||||||||||||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||||||| ||| || ||||||||||||    
T  6603574 cacacaatgtctgtacgattgcaatcagctacaacatgatccttcttaccacaccggacacagttcttgatttcctcaggacaggcgttgctcttgtggc 6603673  T
Q  212 ctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||| ||||||||||||||    
T  6603674 ctttctcaccacaattgaagcacacaatctctgc 6603707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 242
Target Start/End: Complemental strand, 15399898 - 15399679
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgt 121  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  15399898 ccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaacta-tgtgaccctctccattgcagttaaaacacacaatgt 15399800  T
Q  122 ccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcacc 221  Q
    ||||||| ||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||    
T  15399799 ccgtacgcttgcattcggctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccacc 15399700  T
Q  222 acaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||    
T  15399699 acaattgaaacacacaatctc 15399679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 24185927 - 24186159
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| ||||    
T  24185927 tctgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcttcattgcagttaa 24186026  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | |||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||| || ||||| |||||  |||| |||||    
T  24186027 aacacacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtg 24186126  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| |||||||||||||||||||||||||    
T  24186127 gcctttcacaccacaattgaaacacacaatctc 24186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 15358823 - 15358996
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    ||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| |    
T  15358823 gtctgcgtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccattgcagttaaaac 15358922  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcc 186  Q
    |||||||||| ||||| ||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15358923 acacaatgtctgtacgcttgcattcggctacaatatgacctttcttgccacaccggacacacttcttgatttcc 15358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 128 - 245
Target Start/End: Complemental strand, 5110684 - 5110567
Alignment:
Q  128 gattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaatt 227  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  5110684 gattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttaatttcctcagggcagacgttgcttttgtggcctttctcaccacaatt 5110585  T
Q  228 gaaacacacaatctctgc 245  Q
    ||||||||||||||||||    
T  5110584 gaaacacacaatctctgc 5110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 16804346 - 16804117
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||  ||||||||| |||| ||| ||||| |||| | ||||||||||  | || || |||| ||| ||||| ||| ||||      
T  16804346 tcattctctgtctgagtaccatccagagcaaaaactcgacccgtagtaggcgacttcttaggctgcttgcattgggaaccaatatgaccctcttcattaa 16804247  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| |||||||| ||||||||||||||||||||||||||| |||||||| || ||||| || ||  ||||    
T  16804246 aattgaagcacacaatatcatttcgcttgcaatcagctacaatatgacctttcttgccacaccggacacatttcttgatctcttcaggacaaacattgct 16804147  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  16804146 cttgtggcctttctcaccacaattgaaaca 16804117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 23415181 - 23414951
Alignment:
Q  12 tgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    ||||||||| |||| ||||||||| |||| ||| ||||| ||| |||||||||||||  | || || |||| ||| ||||| ||| | |||||||| |||    
T  23415181 tgtctgagtaccagccagagcaaaaactcgacccgtagtaggcaccctcttaggctgcttgcattgggaaccaatatgaccctcttcgttgcaattgaag 23415082  T
Q  112 cacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggc 211  Q
    |||||||| ||  | || ||||||| |||||||| |||||| |||||| ||||||||||||| |||||||| || | ||| || ||  | ||||||||||    
T  23415081 cacacaatatcatttcgcttgcaatcagctacaatatgacccttcttgtcacaccggacacatttcttgatctctttaggacaaacattactcttgtggc 23414982  T
Q  212 ctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| ||| | |||||||| ||||||||    
T  23414981 ctttctcgccatagttgaaacagacaatctc 23414951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 16694895 - 16695124
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||| ||||| |||| |||||  || |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| |||| |    
T  16694895 tcattctctgtatgagtaccagccagagttaaaactcgacctgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcattac 16694994  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||||||  | || ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| ||| | || || ||  | ||    
T  16694995 agttgaagcacacaatgtcatttcgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctccaccggacaaacattact 16695094  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    |||| |||||||||| ||||||||||||||    
T  16695095 cttgcggcctttctcgccacaattgaaaca 16695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 242
Target Start/End: Original strand, 11861121 - 11861322
Alignment:
Q  41 taccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtccgtacgattgcaataagc 140  Q
    ||||||||||||||||||||||||||||  | ||||| |||| ||| ||||| ||| | ||| |||| ||||||||||| ||  || | ||||||| |||    
T  11861121 taccagtagtcggcgccctcttaggctgcttgcactgagaaccaatatgaccctcttccttggaattgaagcacacaatatcactatgcttgcaatcagc 11861220  T
Q  141 tacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatc 240  Q
    || |  |||||| ||||| ||||||| || ||| ||||| |  ||||| || || ||  |||||||||||||||||||||||||||||||| | ||||||    
T  11861221 taaagtatgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatc 11861320  T
Q  241 tc 242  Q
    ||    
T  11861321 tc 11861322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 15065802 - 15066038
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| |||||| || ||||| |||||||||||| ||||||||||  | ||||| |||| ||| ||||| ||| | ||||    
T  15065802 tcattctcggtctgagtaccagtcaaagcaaaaaccctacctgtagtcggcgccttcttaggctgcttgcactgagaaccaatatgaccctcttctttgc 15065901  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||| ||||||| ||  || | ||||||| || ||   ||||||| ||||| |||||||||| |||  | || |  || || || || ||  ||||    
T  15065902 aattgaagaacacaatatcattatgcttgcaatcagttaatgcatgacccttcttaccacaccggaaacatctttttacctcttctggacaaacattgct 15066001  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatc 240  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  15066002 cttgtggcctttctcaccacaattaaaacagacaatc 15066038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 23079416 - 23079180
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    |||||||| |||||||| ||||||| ||| || ||||||||||||||||||||| |||||||||  ||||||||||||| ||| ||||||| | | ||      
T  23079416 tcattttcggtctgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctttgtacactgtgaaccaatatgaccttgttctttag 23079317  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    || |||| |||||||||||| || | || || | |||||   ||||| | ||||| ||| | || | |||  |||| |  ||| | || || ||  ||||    
T  23079316 aactaaaacacacaatgtccttatgcttacactcagctagtgcatgaaccttcttaccatagcgaaaacatctctttacctcccccggacaaacattgct 23079217  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatc 240  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  23079216 cttgtggcctttctcaccacaattaaaacaaacaatc 23079180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 6596969 - 6597027
Alignment:
Q  187 tcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  6596969 tcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgc 6597027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 12501808 - 12501893
Alignment:
Q  148 tgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaaca 233  Q
    ||||| |||||||||||||||| ||| ||||| |  |||||||| || ||  ||||||||||||||||||| ||||||||||||||    
T  12501808 tgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaattgaaaca 12501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 14873967 - 14873903
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctg 68  Q
    ||||| || |||||||| ||||||| ||| || ||||||||| ||||||||||| ||||||||||    
T  14873967 tcattctcggtctgagtaccagtcaaagcgaaaactctaccaatagtcggcgccttcttaggctg 14873903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 28757115 - 28757163
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaatt 107  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||    
T  28757115 tcttcggctcaggacactgtgaactaatatgaccttctccattgcaatt 28757163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 14578807 - 14578744
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggct 67  Q
    ||||| || |||||||| ||||||| |||||| ||||||||||||||| ||||| |||| ||||    
T  14578807 tcattctcagtctgagtaccagtcaaagcaaaaactctaccagtagtctgcgccttcttcggct 14578744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 17497620 - 17497663
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  17497620 ctcttgtggcctttctcaccacaagtaaaacagacaatctctgc 17497663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 14873788 - 14873746
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||    
T  14873788 tgctcttatggcctttctcaccacaattaaaacagacaatctc 14873746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 15262367 - 15262424
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggct 67  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||| ||||| | |||||||    
T  15262367 tctgtctgagtaccagtcaaagcaaaaactctcccagtagtctgcgcctttttaggct 15262424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 10408907 - 10408947
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  10408907 ctcttgtggcctttctcaccacatttgtaacaaacaatctc 10408947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 19773004 - 19773245
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19773004 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 19773103  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19773104 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 19773203  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  19773204 tttgtggcctttctcaccacaattgaaacacacaatctctgc 19773245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 41773886 - 41774124
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41773886 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 41773985  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41773986 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 41774085  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
     ||||||||||||||||||||||||||||||||||||||    
T  41774086 tttgtggcctttctcaccacaattgaaacacacaatctc 41774124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 22330223 - 22329988
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  22330223 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgcgaccctctccattgcagttaa 22330124  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  22330123 aacacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 22330024  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  22330023 gcctttctcaccacaattgaaacacacaatctctgc 22329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 16359546 - 16359787
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16359546 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 16359645  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16359646 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 16359745  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16359746 cttgtggcctttctcaccacaattgaaacacacaatctctgc 16359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 27521450 - 27521691
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27521450 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 27521549  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27521550 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgatctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 27521649  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  27521650 tttgtggcctttctcaccacaattgaaacacacaatctctgc 27521691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 27613400 - 27613641
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  27613400 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgagcctctccattgc 27613499  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  27613500 aattaaagcacacaatgtccgtacgattgcaatcagctaccacatgacctttcttgccacaccggacacacttcttgatttcttcagggcagacattgct 27613599  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  27613600 cttgtggcccttctcaccacaattgaaacacacaatctctgc 27613641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 34569538 - 34569779
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34569538 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 34569637  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  34569638 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 34569737  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34569738 cttgtggcctttctcaccacaattgaaacacacaatctctgc 34569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 14997072 - 14996840
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    ||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  14997072 gtctgcgtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgcaattaaagc 14996973  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  14996972 acacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcc 14996873  T
Q  213 tttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||||||||||||    
T  14996872 tttctcaccacaattgaaacacacaatctctgc 14996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 27682736 - 27682501
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  27682736 tctgtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggatgagtacactgtgaactaatgtgaccctctccgttgcaattaa 27682637  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27682636 agcacacaacgtccgtacgattgcaatcagctacagcatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 27682537  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  27682536 gcctttctcaccacaattgaaacacacaatctctgc 27682501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 22137718 - 22137950
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22137718 tctgtctgagtaccagtcaaagcaaagactctaccagtattcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcaattaa 22137817  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||    
T  22137818 aacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtg 22137917  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| |||||||||||||||||||||||||    
T  22137918 gcctttcccaccacaattgaaacacacaatctc 22137950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 40711824 - 40712065
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40711824 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 40711923  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||| |||| ||||| ||||||||||| |||||||||||||||||||| ||| || ||||    
T  40711924 aattaaagcacacaatgtctgtacgattgcaatcagccaccacacgacccttcttaccacaccggacgcacttcttgatttcctcaggacaggcgttgct 40712023  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  40712024 cttgtggcctttctcaccacaattgaagcacacaatctctgc 40712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 27665832 - 27665610
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27665832 tcattctctgtctgagtcccagtcaaagcgaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 27665733  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  27665732 aattaaagcacacaatgtctgtatgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgct 27665633  T
Q  204 cttgtggcctttctcaccacaat 226  Q
    |||||||||||||||||||||||    
T  27665632 cttgtggcctttctcaccacaat 27665610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 37288832 - 37288598
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  37288832 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaa 37288733  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | ||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  37288732 aacacacaatgtccgtacgcttgcattcagctacaatgtgaactttcttgccacaccggacacacttcttgatttcttcagggcagacgttgcttttgtg 37288633  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||| |||||||||||||||||||||||||||    
T  37288632 gcctttcccaccacaattgaaacacacaatctctg 37288598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 29473409 - 29473175
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  29473409 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaa 29473310  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||||  |||| |||||    
T  29473309 aacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacatcgaacacacttcttgatttcttcagggcagacattgcttttgtg 29473210  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||| |||||||||||||||||||||||||||    
T  29473209 gcctttcccaccacaattgaaacacacaatctctg 29473175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 22350972 - 22351201
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |    
T  22350972 gtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggatgagtacactgtgaactaatgtgaccctctccattgcagttaaaac 22351071  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||  |||| ||||||||    
T  22351072 acacaatgttcgtacgcttgcattaagctacaatatgacctttcttgccacaccggacacacttcttcatttcttcggggcagacattgcttttgtggcc 22351171  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| ||||||| |||||||||||||||||    
T  22351172 tttcccaccacagttgaaacacacaatctc 22351201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 18782158 - 18782396
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||| | ||| |||| |    
T  18782158 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaacctcttcattac 18782257  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||| || || ||  |||| ||||||| |||||||| |||||| |||||||||||||||||||| || ||||| || ||||| || ||  | ||    
T  18782258 aattgaagcatacgatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccggacacattttttgatctcttcaggacaaacattact 18782357  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  18782358 cttgtggcctttctcgccacagttgaaacaaacaatctc 18782396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 20803680 - 20803879
Alignment:
Q  43 ccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtccgtacgattgcaataagcta 142  Q
    ||||||||| || |||||||||||||  | ||||| |||| ||| ||||  ||| | |||| ||| ||||||||||| ||  || | ||||| | |||||    
T  20803680 ccagtagtcagcaccctcttaggctgcttgcactgagaaccaatatgactctcttccttgccattgaagcacacaatatcactatgcttgcagtcagcta 20803779  T
Q  143 caacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
     |  |||||| ||||||||||||| || ||| ||||| |  ||||||||||| ||  | ||||||||||||||||||||| |||||||||| ||||||||    
T  20803780 aagtatgacccttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataattgaaacagacaatctc 20803879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 23461015 - 23461242
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||| ||| ||||||| |||||| ||||||||||||||||||||| ||||||| ||  | ||||| |||| ||| | ||| ||| | ||||    
T  23461015 tcattctcggtctaagtaccagtcaaagcaaaaactctaccagtagtcggcgccttcttaggttgtttgcactgggaaccaatattaccctcttccttgc 23461114  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||  || |||||||| ||   | | ||||| | ||||| |  |||||  |||||||||||||||| ||| ||||| |  ||||| || || ||  ||||    
T  23461115 aatcgaaacacacaatatcaccatgcttgcattcagctaaagtatgactcttcttgccacaccggaaacatttcttcacctcctctggacaaacattgct 23461214  T
Q  204 cttgtggcctttctcaccacaattgaaa 231  Q
    ||||||||||||||||||||||||||||    
T  23461215 cttgtggcctttctcaccacaattgaaa 23461242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 21882854 - 21882936
Alignment:
Q  40 ctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtc 122  Q
    ||||||||||||||| || ||||||||||  ||||||| |||| ||||||||||||| |||| ||||| ||||||||||||||    
T  21882854 ctaccagtagtcggcaccttcttaggctgcttacactgagaaccaatgtgaccttcttcattacaattgaagcacacaatgtc 21882936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 23526107 - 23526333
Alignment:
Q  16 tgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcaca 115  Q
    ||||| ||| ||| ||| || ||||||||||||||||||||| ||||||||||  | ||||| |||| ||| ||||| ||| |||||||||| |||||||    
T  23526107 tgagtaccaatcaaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatatgaccctcttcattgcaattgaagcaca 23526206  T
Q  116 caatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggccttt 215  Q
    |||| ||  |||| |||||||  ||||   ||||||| ||||| ||||| | || |||  | || |  ||   ||| ||  |  ||||||||||||||||    
T  23526207 caatatcattacggttgcaattggctaatgcatgacccttcttaccacatctgaaacatctttttacctctctaggacaagcattgctcttgtggccttt 23526306  T
Q  216 ctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||| ||||| ||||||||    
T  23526307 ctcaccacaattaaaacagacaatctc 23526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 25429473 - 25429574
Alignment:
Q  12 tgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    |||||| || ||||||| |||||| ||||||||||||| ||||||| |||||||||   | || ||||||| ||||||||| ||| |||| ||||| |||    
T  25429473 tgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcattgtgaaccaatgtgaccctcttcattacaattgaag 25429572  T
Q  112 ca 113  Q
    ||    
T  25429573 ca 25429574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 25429660 - 25429705
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||||| | ||||| |||||||||||    
T  25429660 tgctcttgtggcctttctcaccacaagtaaaacagacaatctctgc 25429705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 26736063 - 26736006
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggct 67  Q
    ||||||||||| ||||||| |||||| ||||||| ||||||| ||||| |||||||||    
T  26736063 tctgtctgagtaccagtcaaagcaaaaactctactagtagtctgcgccttcttaggct 26736006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 21332328 - 21332214
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||| ||||||| ||||||| |||||| ||||| ||||||||| || || |||||||||   | || || |||| |||||||||||   ||||||    
T  21332328 tcattctctatctgagtaccagtcaaagcaaaaactctcccagtagtctgcaccttcttaggcttcttgcattgcgaaccaatgtgacctttctcattgc 21332229  T
Q  104 aattaaagcacacaa 118  Q
    |||| || |||||||    
T  21332228 aattgaaacacacaa 21332214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 21883015 - 21883057
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||    
T  21883015 tgctcttgtggcctttctcgccacaattaaaacagacaatctc 21883057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 22505901 - 22505943
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||    
T  22505901 tgctcttgtggcctttctcaccacacttgtaacaaacaatctc 22505943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 14884135 - 14884095
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  14884135 ctcttgtggcctttctcaccacacttgtaacaaacaatctc 14884095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 20345363 - 20345427
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| |||| || ||||||||||||||| |||||||| |||||||| ||  |||| |||||||||    
T  20345363 tcttcggctcaggacactgtgaactaatatgaccttccccattgcagttgtagcagacaatgtcc 20345427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 24712777 - 24713018
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24712777 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 24712876  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24712877 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 24712976  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  24712977 tttgtggcctttctcaccacaattgaaacacacaatctctgc 24713018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 24265119 - 24265354
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  24265119 tctgtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgcaattaa 24265218  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  24265219 agcacacaacgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 24265318  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  24265319 gcctttctcaccacaattgaaacacacaatctctgc 24265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 22323042 - 22322804
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22323042 tcattctctgtctgagtcccagtcaaagcaaagatcctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 22322943  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22322942 aattaaagcacacaatgtctgtacgattgcaatcagctataacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 22322843  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
     ||||||||||||||||||||||||||||||||||||||    
T  22322842 tttgtggcctttctcaccacaattgaaacacacaatctc 22322804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 9338325 - 9338566
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9338325 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 9338424  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9338425 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 9338524  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9338525 cttgtggcctttctcaccacaattgaaacacacaatctctgc 9338566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 9486959 - 9487200
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9486959 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 9487058  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9487059 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 9487158  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9487159 cttgtggcctttctcaccacaattgaaacacacaatctctgc 9487200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 16983983 - 16984224
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16983983 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 16984082  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16984083 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 16984182  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16984183 cttgtggcctttctcaccacaattgaaacacacaatctctgc 16984224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 44383270 - 44383029
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44383270 tcattctctgtctgagtcccagtcaaagcaaagaccctacccgtagtcagcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 44383171  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||    
T  44383170 aattaaagcacacaacgtccgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcattgct 44383071  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  44383070 cttgtggcctttctcaccacaattgaagcacacaatctctgc 44383029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 10871593 - 10871834
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  10871593 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgggtacactatgaactaatgtgaccctctccgttgc 10871692  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10871693 aattaaagcaaacaatgtctgtgcgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 10871792  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||| ||||||    
T  10871793 tttgtggcctttctcaccacaattgaaacacacaagctctgc 10871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 27374012 - 27374253
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27374012 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 27374111  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  27374112 aattaaagcaaacaatgtctgtacgattgcaatcagctaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 27374211  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  27374212 cttgtggcctttctcaccacaattgaagcacacaatctctgc 27374253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 17001743 - 17001984
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  17001743 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccgttgc 17001842  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  17001843 aattaaagcaaacaatgtctgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 17001942  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  17001943 cttgtggcctttctcgccacaattgaagcacacaatctctgc 17001984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 24874441 - 24874212
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |    
T  24874441 gtctgagtaccagtcaaagcaaagaccctaccagtagtcagcgccctcttaggctgagtacactgtgaactaatttgaccctctccattgcagttaaaac 24874342  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||||| ||| |||||||  |||| ||||||||    
T  24874341 acacaatgtccgtacgcttgcaatcagctacaatatgacctttcttgccacaccggacacatttcttaatttcttcatggcagacattgcttttgtggcc 24874242  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| ||||||| |||||||||||||||||    
T  24874241 tttcccaccacagttgaaacacacaatctc 24874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 21139672 - 21139441
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |    
T  21139672 gtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctattaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaac 21139573  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||||||||||   ||| ||||||| |||||||| |||||| |||||||||||||||||||  |||||||| || ||| | |||||  |||| ||||||||    
T  21139572 acacaatgtcttcacgcttgcaatcagctacaatatgacccttcttgccacaccggacacggttcttgatctcttcacgacagacattgcttttgtggcc 21139473  T
Q  213 tttctcaccacaattgaaacacacaatctctg 244  Q
    |||  |||||||||||||||||||||||||||    
T  21139472 ttttccaccacaattgaaacacacaatctctg 21139441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 244
Target Start/End: Complemental strand, 23116718 - 23116519
Alignment:
Q  45 agtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtccgtacgattgcaataagctaca 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||| || | ||||||| ||||||     
T  23116718 agtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcattgcagttaaaacacacaatgtccttatgcttgcaatcagctacg 23116619  T
Q  145 acatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatctctg 244  Q
    | ||||||  |||||| |||||||||||| |||||||| || ||||| || ||  | ||||||||||||||| | ||||| |||||||| ||||||||||    
T  23116618 atatgacccctcttgctacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctg 23116519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 23205057 - 23205295
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||||||||| ||| |||| |    
T  23205057 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatgtgaccctcttcattac 23205156  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | |  ||||||| |||||||| |||||| |||||||||||| ||||||| |||||||| || ||||| || ||  | ||    
T  23205157 aattgaagcacacaatatcatttctcttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattact 23205256  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  23205257 cttgtggcctttctcgccacagttgaaacaaacaatctc 23205295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 23676661 - 23676899
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||||||||| ||| |||| |    
T  23676661 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatgtgaccctcttcattac 23676760  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | |  ||||||| |||||||| |||||| |||||||||||| ||||||| |||||||| || ||||| || ||  | ||    
T  23676761 aattgaagcacacaatatcatttctcttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattact 23676860  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  23676861 cttgtggcctttctcgccacagttgaaacaaacaatctc 23676899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 24705182 - 24704944
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||| || |||| ||||||||||||| ||||||||||  | ||||| ||||  |||||||| ||| |||| |    
T  24705182 tcattctctgtctgagtaccagtcaaagcaaaaaccctactagtagtcggcgccttcttaggctgcttgcactgagaacctatgtgaccctcttcattac 24705083  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||||||  |||| ||||||| ||||| |   ||||| |||||||||||| ||| ||| ||||| |  |||||||| || ||  ||||    
T  24705082 aattgaagcacacaatgtcattacgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgct 24704983  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  24704982 cttgtggcctttctcaccacaattgaaacagataatctc 24704944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 22463181 - 22462943
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| |||  |||| ||||||||||| |||||  | || || |||| ||| ||||| ||| | ||||    
T  22463181 tcattctctgtctgagtaccagccagagcaaaaactcgacccatagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcgttgc 22463082  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| ||||||| |||||| | |||||| |||||||||||| ||||||| |||||||| || ||||| || ||  | ||    
T  22463081 aattgaagcacacaatatcattacgcttgcaatcagctacgatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattact 22462982  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  22462981 cttgtggcctttctcaccacagttgaaacaaacaatctc 22462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 11351411 - 11351173
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || |||| ||||||||| || ||||||||||||||| |||||||||||||  |  |||| |||| ||||||||| ||| | ||||    
T  11351411 tcattctctgtctgtgtaccagccagagcaaaaaccctaccagtagtcggcaccctcttaggctgcttggactgagaaccaatgtgaccctcttccttgc 11351312  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||    |||||| ||||||||||||| || ||| ||||  |  ||||  || || ||  ||||    
T  11351311 aattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacctcctttggacaaacattgct 11351212  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  11351211 cttgtggcctttctcaccacaattgaaacagacaatctc 11351173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 23105419 - 23105312
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgacct-tctccattgcaattaaag 111  Q
    ||||| || ||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||| ||| |||||||||| |||    
T  23105419 gtctgtgtaccagtcaaagcaaaaactctaccagtagtcggcgccttcttaggctgcttacactgtgaaccaatgtgacctctcttcattgcaattgaag 23105320  T
Q  112 cacacaat 119  Q
    ||||||||    
T  23105319 cacacaat 23105312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 22742666 - 22742548
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || ||| ||||||||||||||||| ||||||||||  ||||||| |||| ||||||||| ||| ||||||    
T  22742666 tcattctcggtctgagtaccagtcaaagcgaaaactttaccagtagtcggcgccttcttaggctgcttacactgcgaaccaatgtgaccctcttcattgc 22742567  T
Q  104 aattaaagcacacaatgtc 122  Q
    |||| ||||||||||||||    
T  22742566 aattgaagcacacaatgtc 22742548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 24657358 - 24657129
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||  | ||||    
T  24657358 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcctctttgc 24657259  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
     |||||| ||||| || ||   | | ||||||| |||||     ||||| |||||||||||||||| ||||||||| |  |||||||| || ||  | ||    
T  24657258 cattaaaacacacgatatcaccatgtttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtact 24657159  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  24657158 cttgtggcctttctcaccacaattgaaaca 24657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 23029149 - 23028939
Alignment:
Q  16 tgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcaca 115  Q
    ||||| ||||||| ||| || ||||||||||||||||||||| ||||||| ||  | ||||| |||| ||||||||| ||| |||||||||| |||||||    
T  23029149 tgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggttgcttgcactgagaaccaatgtgaccctcttcattgcaattgaagcaca 23029050  T
Q  116 caatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggccttt 215  Q
    |||| ||  || | ||||||| |||||   ||||||| ||||| ||||| |||| |||  |||| |  ||  |||| ||  |  ||||||||||||||||    
T  23029049 caatatcattatgtttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctccaggacaagcattgctcttgtggccttt 23028950  T
Q  216 ctcaccacaat 226  Q
    |||||||||||    
T  23028949 ctcaccacaat 23028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 24678230 - 24678468
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || ||||||| ||| || ||||||||||||||||||||| ||||||||||  | ||||| ||||  |||||||  ||| || |||    
T  24678230 tcattctctgtctgtgtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaacctatgtgactctcttcaatgc 24678329  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||||||  |||| ||||| | |||||   ||||||| ||||| ||||| |||| |||  |||| |  ||  | || ||  |  ||||    
T  24678330 aattgaagcacacaatgtcattacgcttgcactcagctagtgcatgacccttcttaccacaacggaaacatctcttaacctctcccggacaagcattgct 24678429  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| || || ||||||||    
T  24678430 cttgtggcctttctcaccacaattaaagcagacaatctc 24678468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 21322966 - 21322878
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgacc 92  Q
    ||||| || |||||||| || ||||  ||||| |||||||||||||| |||||| ||||||| || ||||| ||||||| |||||||||    
T  21322966 tcattctcggtctgagtaccggtcaatgcaaaaactctaccagtagttggcgccttcttaggttgcgtacattgtgaaccaatgtgacc 21322878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 23065162 - 23065265
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||| | || ||| ||||| ||||||||||||||| |||||||||   | |||||||||| ||||||||| ||| |||| ||||| |    
T  23065162 tctgtctgtgtaccagtgaaagaaaaaactctgccagtagtcggcgccttcttaggctttttgcactgtgaaccaatgtgaccctcttcattacaattga 23065261  T
Q  110 agca 113  Q
    ||||    
T  23065262 agca 23065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 23074612 - 23074715
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||| | || ||| ||||| ||||||||||||||| |||||||||   | |||||||||| ||||||||| ||| |||| ||||| |    
T  23074612 tctgtctgtgtaccagtgaaagaaaaaactctgccagtagtcggcgccttcttaggctttttgcactgtgaaccaatgtgaccctcttcattacaattga 23074711  T
Q  110 agca 113  Q
    ||||    
T  23074712 agca 23074715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 22733456 - 22733365
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| || ||| |||||||||||||||||| || ||||||| |   | |||||||||| ||||||||| ||| |||| ||||| |||||    
T  22733456 ccagtcaaagtaaaaactctaccagtagtcggcaccttcttaggtttcttgcactgtgaaccaatgtgaccctcttcattacaattgaagca 22733365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 21320507 - 21320465
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||    
T  21320507 tgctcttgtggcctttctcgccacaattaaaacagacaatctc 21320465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 15158220 - 15157985
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  15158220 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgcaattaa 15158121  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  15158120 agcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 15158021  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  15158020 gcctttctcaccacaattgaaacacacaatctctgc 15157985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 13689148 - 13689383
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  13689148 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctatccgttgcaattaa 13689247  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  13689248 agcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 13689347  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  13689348 gcctttctcaccacaattgaaacacacaatctctgc 13689383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 18180844 - 18181085
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18180844 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 18180943  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  18180944 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgct 18181043  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     | |||||||||||| ||||||||||||||||||||||||||    
T  18181044 ttcgtggcctttctcgccacaattgaaacacacaatctctgc 18181085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 8710706 - 8710947
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||    
T  8710706 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctttccgttgc 8710805  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  8710806 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 8710905  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  8710906 tttgtggcctttctcaccacaattgaaacacacaatctctgc 8710947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 11234376 - 11234142
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11234376 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaa 11234277  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  11234276 aacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtg 11234177  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||| |||||||||||||||||||||||||||    
T  11234176 gcctttcccaccacaattgaaacacacaatctctg 11234142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 14335497 - 14335738
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  14335497 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 14335596  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  14335597 aattaaagcaaacaatgtctgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 14335696  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  14335697 cttgtggcctttctcaccacaattgaagcacacaatctctgc 14335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 18587340 - 18587100
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  18587340 tcattctctgtctgagtcccagtcaaagcaaagaccctactagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 18587241  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||||||||||||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  18587240 aattaaagcaaacaatgtccgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 18587141  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  18587140 cttgtggcctttctcaccacaattgaagcacacaatctctg 18587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 44788520 - 44788279
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  44788520 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctaagtacactgtgaactaatgtgaccctctccgttgc 44788421  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  44788420 aattaaagcaaacaatgtctgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 44788321  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  44788320 cttgtggcctttctcgccacaattgaagcacacaatctctgc 44788279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 11550265 - 11550033
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||| ||||    
T  11550265 tctgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatatgtccctctccattgcagttaa 11550166  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | |||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||| ||||||||||||||| || ||||| |||||  |||| |||||    
T  11550165 aacacacaatgtccttacgcttgcaatcaactacaatatgacccttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtg 11550066  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| |||||||||||||||||||||||||    
T  11550065 gcctttcacaccacaattgaaacacacaatctc 11550033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 12690608 - 12690840
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| ||||    
T  12690608 tctgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcttcattgcagttaa 12690707  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |  ||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||| || ||||| |||||  |||| |||||    
T  12690708 aatacacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtg 12690807  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    | ||||| |||||||||||||||||||||||||    
T  12690808 gactttcacaccacaattgaaacacacaatctc 12690840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 47 - 242
Target Start/End: Original strand, 14957652 - 14957847
Alignment:
Q  47 tagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtccgtacgattgcaataagctacaac 146  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||||| |||| ||||||| ||||||||     
T  14957652 tagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcttcattgcagttaaaacacacaatgtccttacgcttgcaatcagctacaat 14957751  T
Q  147 atgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||| ||||||||||||||||||||||||||||| || ||||| |||||  |||| |||||||||||| |||||||||||||||||||||||||    
T  14957752 atgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccacaattgaaacacacaatctc 14957847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 10873653 - 10873803
Alignment:
Q  94 tctccattgcaattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggc 193  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| |    
T  10873653 tctccatt-caattaaagcacacaatgtctgtacgattgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggac 10873751  T
Q  194 agacgatgctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    || || ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  10873752 aggcgttgctcttgtggtctttctcaccacaattgaagcacacaatctctgc 10873803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 11984093 - 11984322
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||| ||||||| |||| |||| |||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||| |||||     
T  11984093 tcattctctatctgagtaccagccagaccaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattga 11984192  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| || ||||  || ||  ||||    
T  11984193 aattgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcagtacaaacattgct 11984292  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  11984293 cttgtggcctttctcaccacaattgaaaca 11984322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 9591465 - 9591706
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| ||| ||||||| |||||  | || || |||| ||| ||||| ||| |||| |    
T  9591465 tcattctctgtctgagtaccagccagagcaaaaactcgacctgtagtaggctccctcttcggctgcttgcattgggaaccaatatgaccctcttcattac 9591564  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| ||||| || |||||| |||||||||||||||||||| |||||||| || ||||| || ||  ||||    
T  9591565 aattgaagcacacaatatcatttcgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgct 9591664  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  9591665 cttgtggcctttctcgccacagttgaaacagacaatctctgc 9591706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 16726610 - 16726375
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| || |||||| |||| |||  |||| |||| |||||| |||||  | || || |||| ||||||||| ||| |||| |    
T  16726610 tcattctctgtctgagtaccagccaaagcaaaaactcgacccatagtaggcgacctcttcggctgcttgcattgggaaccaatgtgaccctcttcattac 16726511  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||| ||||||| |||||||| |||||| || |||||||| |||||||| |||||||| || ||||| || ||  | ||    
T  16726510 agttgaagcacacaatatcattacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatctcttcaggacaaacattact 16726411  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||||| |||||||| |||||    
T  16726410 cttgtggcctttcccgccacagttgaaacaaacaat 16726375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 17703624 - 17703389
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| || |||||| |||| |||  |||| |||| |||||| |||||  | || || |||| ||||||||| ||| |||| |    
T  17703624 tcattctctgtctgagtaccagccaaagcaaaaactcgacccatagtaggcgacctcttcggctgcttgcattgggaaccaatgtgaccctcttcattac 17703525  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||| ||||||| |||||||| |||||| || |||||||| |||||||| |||||||| || ||||| || ||  | ||    
T  17703524 agttgaagcacacaatatcattacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatctcttcaggacaaacattact 17703425  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||||| |||||||| |||||    
T  17703424 cttgtggcctttcccgccacagttgaaacaaacaat 17703389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 12459785 - 12459849
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||| ||| |||| |||||||||    
T  12459785 tcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtcc 12459849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 26115539 - 26115499
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  26115539 ctcttgtggcctttctcaccacacttgtaacaaacaatctc 26115499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 24293087 - 24292846
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24293087 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 24292988  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  24292987 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgct 24292888  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  24292887 cttgtggcctttctcgccacaattgaaacacacaatctctgc 24292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 27205598 - 27205839
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  27205598 tcattctctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatatgaccctctccattgc 27205697  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  27205698 aattgaagcacacaatgtccgaacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgct 27205797  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27205798 cttgtggcctttctcaccacaattgaaacacacaatctctgc 27205839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 27243630 - 27243389
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  27243630 tcattctctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatatgaccctctccattgc 27243531  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  27243530 aattgaagcacacaatgtccgaacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgct 27243431  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27243430 cttgtggcctttctcaccacaattgaaacacacaatctctgc 27243389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 29589744 - 29589503
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29589744 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 29589645  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  29589644 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 29589545  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29589544 cttgtggcctttctcaccacaattgaaacacacaatctctgc 29589503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 2872101 - 2871867
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2872101 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggtgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcaattaa 2872002  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  2872001 agcacacaatgtccgtacaattgcagtcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtg 2871902  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||| |||||||||||||||||||||||||||    
T  2871901 gcctttcccaccacaattgaaacacacaatctctg 2871867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 28312606 - 28312847
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  28312606 tcattttctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccttctccattgc 28312705  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||| |  ||| || ||||    
T  28312706 aattaaagcacacaatgtctgtacgattgcaatcagctactacatgacctttcttgccacaccgggcacacttcttgatttcctcggaacaggcgttgct 28312805  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  28312806 cttgtggcctttctcaccacaattgaagcacacaatctctgc 28312847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 16574866 - 16575107
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  16574866 tcattctctgtctgagtccccgtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 16574965  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  16574966 aattaaagcaaacaatgtctgtacgattgcaatcagccaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 16575065  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  16575066 cttgtggcctttctcaccacaattgaagcacacaatctctgc 16575107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 16620514 - 16620273
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  16620514 tcattctctgtctgagtccccgtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 16620415  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  16620414 aattaaagcaaacaatgtctgtacgattgcaatcagccaccacatgacctttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 16620315  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  16620314 cttgtggcctttctcaccacaattgaagcacacaatctctgc 16620273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 25115537 - 25115766
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |    
T  25115537 gtctgagtaccagtcaaggcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaac 25115636  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||    
T  25115637 acacaatatccgtacgattgcaatcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacattgcttttgtggcc 25115736  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| |||||||||||||||||||||||||    
T  25115737 tttcccaccacaattgaaacacacaatctc 25115766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 28260502 - 28260261
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  28260502 tcattctctgtctgagtctcagtcaaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgc 28260403  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | |||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| || || ||| || ||||    
T  28260402 agttaaagcacacaatgtccgtgcgattgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgct 28260303  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  28260302 cttgtggcctttcccaccacaattgaagcacacaatctctgc 28260261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 28285414 - 28285655
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  28285414 tcattctctgtctgagtctcagtcaaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgc 28285513  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | |||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| || || ||| || ||||    
T  28285514 agttaaagcacacaatgtccgtgcgattgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgct 28285613  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  28285614 cttgtggcctttcccaccacaattgaagcacacaatctctgc 28285655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 28339251 - 28339010
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  28339251 tcattctctgtctgagtctcagtcaaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgc 28339152  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | |||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| || || ||| || ||||    
T  28339151 agttaaagcacacaatgtccgtgcgattgcaatcagctacaacatgacctctcttaccacaccggacacacttcttgatttcttcgggacaggcgttgct 28339052  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  28339051 cttgtggcctttcccaccacaattgaagcacacaatctctgc 28339010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 22829682 - 22829453
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |    
T  22829682 gtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacacggtgaactaatgtgaccctctccattgcagttaaaac 22829583  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| || ||||| |||||  |||| ||||||||    
T  22829582 acacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtggcc 22829483  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||  |||||||||||||||||||||||||    
T  22829482 ttttccaccacaattgaaacacacaatctc 22829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 5836525 - 5836295
Alignment:
Q  12 tgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||     
T  5836525 tgtctgagtaccagtcaaagcaaaaactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcgttgcagttaaaa 5836426  T
Q  112 cacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggc 211  Q
    |||||||||||| |||| |||||||  ||||||| |||||| |||||||||||||||||||| |||||||| || || || || ||  |||| | |||||    
T  5836425 cacacaatgtccttacgcttgcaatcggctacaatatgacccttcttgccacaccggacacatttcttgatctcttctggacaaacattgctttcgtggc 5836326  T
Q  212 ctttctcaccacaattgaaacacacaatctc 242  Q
    ||||| ||||||| |||||||||||||||||    
T  5836325 ctttcccaccacagttgaaacacacaatctc 5836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 25756920 - 25756682
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||  ||||||    
T  25756920 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggctgtttgcattgggaaccaatatgaccctcctcattgc 25756821  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| ||||||| |||||| | |||||| |||||||| ||||||||||| ||||| || || || ||  | ||  |||     
T  25756820 aattgaagcacacaatatcattacgcttgcaatcagctactatatgacccttcttgccgcaccggacacatttctttatctcttctggaaaaacattgca 25756721  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  25756720 cttgtggcctttctcaccacaattaaaacagacaatctc 25756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 27559274 - 27559045
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||  |||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||  | ||||    
T  27559274 tcattctctgtctgagtaccagctagagcaaaaactcaacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcctctttgc 27559175  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||| ||||| | | | ||||| | |||||     ||||| |||||||||||||||| ||||||||| |  |||||||| || ||  | ||    
T  27559174 aattaaagcacacgatgtcagcatgcttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtact 27559075  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  27559074 cttgtggcctttctcaccacaattgaaaca 27559045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 22436845 - 22437083
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| |||| |    
T  22436845 tcattctcggtctgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccatcttcattac 22436944  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||||||  |||| ||||| | |||||   ||||||| ||||| ||||| |||| |||  |||| |  ||  | || ||  |  ||||    
T  22436945 aattgaagcacacaatgtcattacgtttgcactcagctagtgcatgacccttcttaccacatcggaaacatctctttacctcacccggacaagcattgct 22437044  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| || || ||||||||    
T  22437045 cttgtggcctttctcaccacaattaaagcagacaatctc 22437083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 19867672 - 19867778
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||| || ||||||| ||||||||||||| ||||||||||  ||||||| |||| ||||||||| ||| |||||||||| ||||    
T  19867672 gtctgagtaccagtcaaagcgaaaactctactagtagtcggcgccttcttaggctgcttacactgcgaaccaatgtgaccctcttcattgcaattgaagc 19867771  T
Q  113 acacaat 119  Q
    |||||||    
T  19867772 acacaat 19867778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 241
Target Start/End: Complemental strand, 18405229 - 18405012
Alignment:
Q  24 agtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    ||||| |||||| |||||||||||||||| |||| |||||||||   | ||||| |||| ||||||||||||| |||||||||| ||||| || || |||    
T  18405229 agtcaaagcaaaaactctaccagtagtcgacgccttcttaggcttcttgcactgagaaccaatgtgaccttcttcattgcaattgaagcatactatatcc 18405130  T
Q  124 gtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccac 223  Q
      | | ||||| | |||||   ||||||| ||||| ||||| || | |||| |||| |  ||| |||| ||  |  | ||||||||||||||||||||||    
T  18405129 tcatgtttgcactcagctagtgcatgacccttcttaccacagcgaaaacacctcttaacatccccaggacaagcattactcttgtggcctttctcaccac 18405030  T
Q  224 aattgaaacacacaatct 241  Q
    || ||||||| |||||||    
T  18405029 aagtgaaacagacaatct 18405012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 16924939 - 16924867
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaac 82  Q
    |||||||| || || |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16924939 tctgtctgtgtacccgtcaaagcaaaaactctaccagtagtcggcgccttcttaggctgagtacactgtgaac 16924867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 10466098 - 10466034
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||| ||| |||| |||||||||    
T  10466098 tcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtcc 10466034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 21764984 - 21765026
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  21764984 tgctcttgtggcctttctcaccacaattgaaacagacaatctc 21765026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 23081399 - 23081514
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||  |||||| |||||| ||||| ||||||||| ||||| |||||||||   |  |||| |||| |||||||||||   ||||||    
T  23081399 tcattctctgtctgagtatcagtcaaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgtactgcgaaccaatgtgacctttctcattgc 23081498  T
Q  104 aattaaagcacacaat 119  Q
    |||| || ||||||||    
T  23081499 aattgaaacacacaat 23081514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 107
Target Start/End: Original strand, 24367445 - 24367479
Alignment:
Q  73 cactgtgaactaatgtgaccttctccattgcaatt 107  Q
    |||||||||||||| ||||||||||||||||||||    
T  24367445 cactgtgaactaatatgaccttctccattgcaatt 24367479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 21474774 - 21474814
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  21474774 ctcttgtggcctttttcaccacacttgaaacaaacaatctc 21474814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 27714448 - 27714689
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  27714448 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttagactgagtacactgtgaactaatgtgaccctctccattgc 27714547  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  27714548 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgct 27714647  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  27714648 cttgtggcctttctcaccacaattgaagcacacaatctctgc 27714689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 8050517 - 8050282
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8050517 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcaattaa 8050418  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  8050417 agcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacgttgctcttgtg 8050318  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||| ||||||||||||||||||||||||||||||||    
T  8050317 gcccttctcaccacaattgaaacacacaatctctgc 8050282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 12479712 - 12479953
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  12479712 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 12479811  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12479812 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 12479911  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  12479912 cttatggcctttctcaccacaattgaaacacacaatctctgc 12479953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 17092049 - 17091808
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17092049 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 17091950  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  17091949 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcagggcagacgttgct 17091850  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17091849 cttgtggcctttctcaccacaattgaaacacacaatctctgc 17091808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 23958859 - 23959100
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23958859 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 23958958  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  23958959 aattaaagcacacaatatctgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgct 23959058  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  23959059 cttgtggcctttctcaccacaattgaagcacacaatctctgc 23959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 19775693 - 19775452
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19775693 tcattctctgtctgagtcccagtcaaagcgaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 19775594  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  19775593 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgct 19775494  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19775493 cttgtggcctttctcaccacaattgaatcacacaatctctgc 19775452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 14300873 - 14300638
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  14300873 tctgtctgagtaccagtcaaagcaaagactctacctgtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccgttgcaattaa 14300774  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||    
T  14300773 agcaaacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcaaggcagacgttgcttttgtg 14300674  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  14300673 gcctttctcaccacaattgaaacacacaatctctgc 14300638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 8389524 - 8389765
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8389524 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgggtacactgtgaactaatgtgaccctctccattgc 8389623  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||    
T  8389624 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgct 8389723  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  8389724 cttgtggcctttctcaccacaattgaagcacacaatctctgc 8389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 16233886 - 16233651
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16233886 tctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgcaattaa 16233787  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||| |||||||| ||||| ||||||| ||| || |||||||| ||||| |||||||||||||||||||||||||||||||| ||| || ||||||||||    
T  16233786 agcaaacaatgtctgtacggttgcaatcagccaccacatgacccttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtg 16233687  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||  |||||||||||||    
T  16233686 gcctttctcaccacaattgaagtacacaatctctgc 16233651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 19635254 - 19635489
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  19635254 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccttcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaa 19635353  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||  |||| |||||    
T  19635354 aacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtg 19635453  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19635454 gcctttcccaccacaattgaaacacacaatctctgc 19635489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 40476161 - 40476390
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    ||||| || ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| |    
T  40476161 gtctgcgtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggccgagtacactgtgaactaatgtgaccctctccgttgcagttaaaac 40476260  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||| |||| ||||||||    
T  40476261 acacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacactgaacacacttcttgatttcttcagggcagacgttgcttttgtggcc 40476360  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| |||||||||||||||||||||||||    
T  40476361 tttcccaccacaattgaaacacacaatctc 40476390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 14683687 - 14683917
Alignment:
Q  12 tgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| || || ||| ||||||| |||||     
T  14683687 tgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatatgtccctcttcattgcagttaaaa 14683786  T
Q  112 cacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggc 211  Q
    |||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||| || ||||| |||||   ||| |||||||    
T  14683787 cacacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacatagcttttgtggc 14683886  T
Q  212 ctttctcaccacaattgaaacacacaatctc 242  Q
    ||||| |||||||||||||||||||||||||    
T  14683887 ctttcccaccacaattgaaacacacaatctc 14683917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 13513462 - 13513703
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||||||||| ||| |||||||||||||  | || || |||| ||| ||||| ||| |||| |    
T  13513462 tcattctctgtctgagtaccagccagagcaaaaactcgaccagtagtaggcaccctcttaggctgcttgcattgggaaccaatatgaccctcttcattac 13513561  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| ||||| || |||||| |||||||||||||||||||| |||||||| || ||||| || ||  ||||    
T  13513562 aattgaagcacacaatatcatttcgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgct 13513661  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  13513662 cttgtggcctttctcgccacagttgaaacagacaatctctgc 13513703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 16250750 - 16250572
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||| | |||  | || || ||||  || ||||| ||| |||| |    
T  16250750 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttcgactgcttgcattgggaacctatatgaccctcttcattac 16250651  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgat 182  Q
    |||| ||||||||||| ||  |||| ||||||| | |||||| |||||| |||||||||||||||||||| ||||||||    
T  16250650 aattgaagcacacaatatcattacgcttgcaatcaactacaatatgacccttcttgccacaccggacacatttcttgat 16250572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 14162609 - 14162696
Alignment:
Q  31 gcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaa 118  Q
    ||||| ||||||||||||||| ||||| ||||||||||  | ||||| |||| ||||||||||||  |||||||||||||||||||||    
T  14162609 gcaaaaactctaccagtagtctgcgccttcttaggctgtttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaa 14162696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 16219300 - 16219414
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||||||  ||| |||||   | || || |||| ||| ||||||||| ||||||    
T  16219300 tcattttctgtctaagtaccagtcaaagcaaaaactctcccagtagtcggcgctttctcaggcttcttgcattgcgaaccaatatgaccttcttcattgc 16219399  T
Q  104 aattaaagcacacaa 118  Q
    |||||||||||||||    
T  16219400 aattaaagcacacaa 16219414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 16222620 - 16222734
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||||||  ||| |||||   | || || |||| ||| ||||||||| ||||||    
T  16222620 tcattttctgtctaagtaccagtcaaagcaaaaactctcccagtagtcggcgctttctcaggcttcttgcattgcgaaccaatatgaccttcttcattgc 16222719  T
Q  104 aattaaagcacacaa 118  Q
    |||||||||||||||    
T  16222720 aattaaagcacacaa 16222734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 18604719 - 18604481
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||| ||||||| |||| ||||||||| |||| ||  ||||| ||| ||||||| ||| |  | || || |||| ||| ||||| ||  | || |    
T  18604719 tcattctctctctgagtaccagccagagcaaaaactcgacttgtagtaggctccctcttcggccgcttgcattgggaaccaatatgaccctcctcgttac 18604620  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| |||||||| | |||| || ||||||||||||||||| |||||||| || ||||| || ||  | ||    
T  18604619 aattgaagcacacaatatcatttcgcttgcaatcagctacaataagaccctttttgccacaccggacacatttcttgatctcttcaggacaaacattact 18604520  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| ||||| || ||||| | ||||||    
T  18604519 cttgtggcctttctcgccacagttaaaacaaataatctc 18604481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 18224236 - 18224135
Alignment:
Q  141 tacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaatc 240  Q
    ||||| |||||| |||||||||||||||||||| |||||||| || ||||| || ||  | | ||||||||||||||| ||||| |||||||| ||||||    
T  18224236 tacaatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattacacttgtggcctttctcgccacagttgaaacaaacaatc 18224137  T
Q  241 tc 242  Q
    ||    
T  18224136 tc 18224135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 15144782 - 15144677
Alignment:
Q  14 tctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| ||||||| ||| || || |||||||||||||||||| |||||||| |  ||||||| |||| ||||||||| ||| |||| || || |||||    
T  15144782 tctgagtaccagtcaaagcgaaaaccctaccagtagtcggcgccttcttaggcagcttacactgcgaaccaatgtgaccctcttcattacagttgaagca 15144683  T
Q  114 cacaat 119  Q
    ||||||    
T  15144682 cacaat 15144677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 15926 - 15820
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  ||||| ||||| ||||||||| ||||| ||||| |||   | || |||||||| || ||||||||  ||||||| |||||||    
T  15926 gtctgagtaccagtcaatgcaaaaactctcccagtagtctgcgccttcttaagcttcttgcattgtgaacttatatgaccttcctcattgcagttaaagc 15827  T
Q  113 acacaat 119  Q
    |||||||    
T  15826 acacaat 15820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 18224346 - 18224282
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctg 68  Q
    ||||| ||||||| ||| |||| ||||||||| |||| ||| ||||| |||||||||||||||||    
T  18224346 tcattctctgtctaagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggctg 18224282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 15073669 - 15073709
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  15073669 ctcttgtggcctttttcaccacacttgaaacagacaatctc 15073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 21833429 - 21833670
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  21833429 tcattctctgtctgagtcccagtcaaagcaaagaccctacgagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 21833528  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21833529 aattaaagcacacaatgtccgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 21833628  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  21833629 tttgtggcctttctcaccacaattgaaacacacaatctctgc 21833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 33388261 - 33388020
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33388261 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 33388162  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  33388161 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctccgggcaaacgttgct 33388062  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  33388061 tttgtggcctttctcaccacaattgaaacacacaatctctgc 33388020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 51330724 - 51330483
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  51330724 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccgttgc 51330625  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51330624 aattaaagcaaacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 51330525  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     ||||||||| |||| ||||||||||||||||||||||||||    
T  51330524 tttgtggcctctctctccacaattgaaacacacaatctctgc 51330483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 41350900 - 41350659
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  41350900 tcattctctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattac 41350801  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| | ||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||| || ||||    
T  41350800 aattaaagcacacaatgtctgcacgattgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgct 41350701  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  41350700 cttgtggcctttctcaccacaattgaagcacacaatctctgc 41350659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 16347827 - 16347589
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16347827 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattgc 16347728  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||||||||||||||| | |||||| |||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||| || ||||    
T  16347727 agttaaagcacacaatgtctgcacgattacaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgct 16347628  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16347627 cttgtggcctttctcaccacaattgaagcacacaatctc 16347589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 21842345 - 21842577
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  21842345 tctgtctgcgtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccattgcagttaa 21842444  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| |  ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||    
T  21842445 aacacacaatgtccgtacgcttgcattcggctacaatatgacctttcttgccacatcggacacacttcttgatttcctcagggcagacattgcttttgtg 21842544  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| |||||||||||||||||||||||||    
T  21842545 gcctttcccaccacaattgaaacacacaatctc 21842577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 22400456 - 22400685
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |    
T  22400456 gtctgagtaccagtcaatgcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaac 22400555  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    |||| ||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||  | || || |||||    
T  22400556 acacgatgtccgtacgcttgcaatccgctacaatatgacccttcttgccacaccggacacacttcttgatctcttcagggcagacattacttttatggcc 22400655  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| | |||||||||||||||||||||||    
T  22400656 tttccctccacaattgaaacacacaatctc 22400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 19109501 - 19109728
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  19109501 tctgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcattgcagttaa 19109600  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | |||||||||||| |||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||| || ||||| |||||  |||| | |||    
T  19109601 aacacacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacaccggacacacttcttgatctcttcaggacagacattgctttagtg 19109700  T
Q  210 gcctttctcaccacaattgaaacacaca 237  Q
     |||||| ||| |||||||||| |||||    
T  19109701 acctttcacacaacaattgaaaaacaca 19109728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 24785089 - 24784851
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||| || |||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| ||||||    
T  24785089 tcattctctgtctgagtaccagtcaaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattgc 24784990  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| || |||||||| ||  |||| ||||| | ||||||   |||||| ||||||||||||||| |||| ||||| || ||||| || || ||  ||||    
T  24784989 aattgaaacacacaatatcattacgcttgcagtcagctaccgtatgacccttcttgccacaccgggcacatttctttatctcctctggacaaacattgct 24784890  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  24784889 cttgtggcctttctcaccataattgaaacagacaatctc 24784851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 22435965 - 22435728
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||  || |||| ||||||||| || |||||||||||||||||||||||||| ||  | ||||| |||| ||||||||| ||| | ||||    
T  22435965 tcattctctgtctctgtaccagccagagcaaaaaccctaccagtagtcggcgccctcttaggttgcttgcactgagaaccaatgtgaccctcttccttgc 22435866  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||    |||||| ||||||||||| |||| ||| ||||| |  ||||| || || ||  ||||    
T  22435865 aattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacatcggaaacatttctttacctcctctggacaaacattgct 22435766  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatct 241  Q
    |||||||||||||||||||||||||||| | |||||||    
T  22435765 cttgtggcctttctcaccacaattgaaatagacaatct 22435728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 22496488 - 22496373
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||| ||| ||||||    
T  22496488 tcattctcggtctgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctgcttacactgcgaactaatgtgaccctcttcattgc 22496389  T
Q  104 aattaaagcacacaat 119  Q
    |||| |||||||||||    
T  22496388 aattgaagcacacaat 22496373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 21228788 - 21228550
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| |||| || |||||| |||| ||| || || |||||||||||||||||  | || || |||| ||| ||||| ||| |||| |    
T  21228788 tcattctccgtctgagtaccagccaaagcaaaaactcgacccgttgtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattac 21228689  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| ||||||||  ||||| ||||||||||||| |||||| |||||||| ||  || | || ||  | ||    
T  21228688 aattgaagcacacaatatcatttcgcttgcaatcagctacaatttgacccttcttgccacacctgacacatttcttgatctctacaagacaaacattact 21228589  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  21228588 cttgtggcctttctcgccacagttgaaacaaacaatctc 21228550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 17042241 - 17042018
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||  || ||||| |||| ||| ||||| |||| |||||| |||||  | ||||| ||||| || ||||| ||| |||| ||||| |    
T  17042241 tctgtctgagtaccagctagtgcaaaaactcgacccgtagtaggcgtcctcttcggctgcttgcactgggaacttatatgaccctcttcattacaattga 17042142  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||||||||| ||  | |  ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| || |||||  | ||  | ||||||||    
T  17042141 agcacacaatatcatttctcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcaggataaacattactcttgtg 17042042  T
Q  210 gcctttctcaccacaattgaaaca 233  Q
    ||||||| | ||||| ||||||||    
T  17042041 gcctttcccgccacagttgaaaca 17042018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 20081575 - 20081490
Alignment:
Q  37 actctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtc 122  Q
    ||||||||||||||||||||| |||||||| | |||||||| |||| ||||||||||||| |||||||||| ||||||||||||||    
T  20081575 actctaccagtagtcggcgccttcttaggccgcgtacactgcgaaccaatgtgaccttcttcattgcaattgaagcacacaatgtc 20081490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 21176555 - 21176670
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| |||||||||||||| | | ||||| |||| ||||||||||||  | || || |||| ||| ||||| ||| ||||||    
T  21176555 tcattctctgtctgagtaccagccagagcaaagactcgatccgtagtaggcgtcctcttaggctgcttgcattgggaaccaatatgaccctcttcattgc 21176654  T
Q  104 aattaaagcacacaat 119  Q
    |||| |||||||||||    
T  21176655 aattgaagcacacaat 21176670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 22401725 - 22401828
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||||||| ||||||| |||||||||   | ||||| |||| ||||||||| ||| |||| ||||| |    
T  22401725 tctgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgcgaaccaatgtgaccctcttcattacaattga 22401824  T
Q  110 agca 113  Q
    ||||    
T  22401825 agca 22401828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 20074745 - 20074703
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  20074745 tgctcttgtggcctttctcaccacacttgtaacacacaatctc 20074703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 21752183 - 21752289
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| | |||||  ||||| ||||||||||||||| || || |||||||||   | |||||||||| ||||||||||||  | |||||||| || |    
T  21752183 gtctgagtactagtcaatgcaaaaactctaccagtagtctgcaccttcttaggcttcttgcactgtgaaccaatgtgaccttcctcgttgcaattgaaac 21752282  T
Q  113 acacaat 119  Q
    |||||||    
T  21752283 acacaat 21752289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 37680275 - 37680310
Alignment:
Q  72 acactgtgaactaatgtgaccttctccattgcaatt 107  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37680275 acactgtgaactaatatgaccttctccattgcaatt 37680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 20081412 - 20081370
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  20081412 tgctcttgtggcctttctcaccacaattaaagcagacaatctc 20081370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 16379239 - 16379336
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||| |||||| ||||||||||||||| | ||| |||| ||||   |||| || |||  ||||||||| ||| |||||||||| || ||||||||    
T  16379239 ccagtcaaagcaaacactctaccagtagtctgagccttctttggcttcttacattgcgaaacaatgtgaccctcttcattgcaattgaaacacacaat 16379336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 24096649 - 24096609
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  24096649 ctcttgtggcctttttcaccacacttgaaacaaacaatctc 24096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 24096792 - 24096728
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| |||||||||||||||||||| || ||||||||| | ||||| ||  |||| |||||||||    
T  24096792 tcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtcc 24096728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 20015866 - 20015625
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20015866 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 20015767  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||    
T  20015766 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccgaacacacttcttgatttcctcagggcagacgttact 20015667  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  20015666 cttgtggcccttctcaccacaattgaaacacacaatctctgc 20015625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 17671625 - 17671384
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17671625 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagttggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 17671526  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||    
T  17671525 aattaaagcacacaatgtctgtacgattgcaatcagctacaacatgacctttcttgccacaccagacacacttcttgatttcctccgggcagacattgct 17671426  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  17671425 tttgtggcctttctcaccacaattgaaacacacaatctctgc 17671384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 19481675 - 19481434
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  19481675 tcattctctgtctgagtcccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattac 19481576  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| | ||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||| || ||||    
T  19481575 aattaaagcacacaatgtctgcacgattgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgct 19481476  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19481475 cttgtggcctttctcaccacaattgaagcacacaatctctgc 19481434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 22117778 - 22117539
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22117778 tcattctctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 22117679  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  22117678 agttaaaacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgct 22117579  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctct 243  Q
     |||||||||||| |||||| |||||||||||||||||||    
T  22117578 tttgtggcctttcccaccacgattgaaacacacaatctct 22117539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 19115578 - 19115819
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19115578 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctctttggctgagtacactgtgaactaatgtgaccctctccattgc 19115677  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||||||||| ||||||||||||| ||| || |||||||| ||||| ||||||||||| |||||||||||||||||||| ||| || ||||    
T  19115678 aattaaagcacacaatgtctgtacgattgcaatcagccaccacatgacccttcttaccacaccggacgcacttcttgatttcctcaggacaggcgttgct 19115777  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||    
T  19115778 cttgtggcctttctcgccacaattgaagcacacaacctctgc 19115819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 22126562 - 22126322
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22126562 tcattctctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgactttctccattgc 22126463  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| ||||||||||| ||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||    
T  22126462 agttaaaacacacaatgtctgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcaaggaagacgttgct 22126363  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctg 244  Q
     |||||||||||| |||||||||||||||||||||||||||    
T  22126362 tttgtggcctttcccaccacaattgaaacacacaatctctg 22126322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 18859761 - 18859996
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18859761 tctgtctgagtaccactcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcaattaa 18859860  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||| ||||| ||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||  |||| |||||    
T  18859861 aacacacaatgtctgtacgcttgcattcagctacaatatgacctttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtg 18859960  T
Q  210 gcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18859961 gcctttcccaccacaattgaaacacacaatctctgc 18859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 22031281 - 22031509
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| || |||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||||||| |||| |    
T  22031281 tcattctctgtctgagtaccagccatagcaaaaactcgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccttcttcattac 22031380  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| ||||||| |||||||| |||||| |||||||||||||||||||| ||||| || || | ||| || ||  ||||    
T  22031381 aattgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttctttatctctttaggacaaacattgct 22031480  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||| |||||||| |||||||||||||||||    
T  22031481 cttatggccttt-tcaccacaattgaaaca 22031509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 22043005 - 22043234
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||||||  ||| ||||||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||| |||| |    
T  22043005 tcattctctgtctgagtagcagccagagcaaaaactcgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattac 22043104  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||| ||||||| |||||||| |||||| |||||||||||||| ||||| |||||||| || || || || ||  | ||    
T  22043105 agttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccgaacacatttcttgatctcttctggacaaacattact 22043204  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  22043205 cttgtggcctttctcaccacaattgaaaca 22043234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 30310747 - 30310512
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||  |||||||| |||| ||| ||||| |||||| |||| |||||  |||| || |||| ||| ||||| ||| | ||||    
T  30310747 tcattctctgtctgagtaccagctagagcaaaaactcgacccgtagtaggcgccttcttcggctgcttacattgggaaccaatatgaccctcttcgttgc 30310648  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| |||||||| |||||| ||||||||||||| |||||| |||||||| || ||||| || ||  | ||    
T  30310647 aattgaagcacacaatatcatttcgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattact 30310548  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||||| ||||| |||||||| |||||    
T  30310547 cttgtggcctttctcgccacagttgaaacaaacaat 30310512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 32603329 - 32603558
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| |||| ||||||||| |||| ||| ||||| |||| |||||| |||||  | ||||| ||||  || ||||| ||| |||| ||||| |    
T  32603329 tctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgtcctcttcggctgcttgcactgggaacctatatgaccctcttcattacaattga 32603428  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||||| ||| ||  | |  ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| || ||| | || ||  | ||||||||    
T  32603429 agcacagaatatcatttctcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtg 32603528  T
Q  210 gcctttctcaccacaattgaaacacacaat 239  Q
    ||||||| ||||||| |||||||| |||||    
T  32603529 gcctttcccaccacagttgaaacaaacaat 32603558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 15536561 - 15536799
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||  |||||||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| |||| |    
T  15536561 tcattctctgtctgagtaccagcaagagcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcattac 15536660  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||| | ||  | || ||||||| |||||||| |||||| || ||||||||||||||||| |||||||| || | ||| || ||  | ||    
T  15536661 aattgaagcacacagtatcatttcgcttgcaatcagctacaatatgaccctttttgccacaccggacacatttcttgatctctttaggacaaacattact 15536760  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||  || |||||||| ||||| | ||||||    
T  15536761 cttgtggccttcttcgccacaattaaaacaaataatctc 15536799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 19981145 - 19981263
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||  || ||||||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| |||| |    
T  19981145 tcattctcggtctgagtaccagtcaaagtgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattac 19981244  T
Q  104 aattaaagcacacaatgtc 122  Q
    |||| ||||||||||||||    
T  19981245 aattgaagcacacaatgtc 19981263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 21164141 - 21164023
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || |||||||||||||| |||||| ||||||| ||  | || || |||| ||||||||| ||| ||||||    
T  21164141 tcattctcggtctgagtaccagtcaaagcgaaaactctaccagtagttggcgccttcttaggttgcttgcattgagaaccaatgtgaccctcttcattgc 21164042  T
Q  104 aattaaagcacacaatgtc 122  Q
    |||| ||||||||||||||    
T  21164041 aattgaagcacacaatgtc 21164023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 18881254 - 18881151
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||||||| ||||||| |||||||||   | |||||||||| ||||||||| ||| |||| ||||| |    
T  18881254 tctgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattacaattga 18881155  T
Q  110 agca 113  Q
    ||||    
T  18881154 agca 18881151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 21391458 - 21391355
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||| |||||||||   | |||| ||||| ||||||||| ||| |||| ||||| |    
T  21391458 tctgtctgtgtaccagtcaaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattga 21391359  T
Q  110 agca 113  Q
    ||||    
T  21391358 agca 21391355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 21780784 - 21780681
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| ||||||||| |||||||||||||||||| |||||||||   | |||| ||||| ||||||||| ||| |||| ||||| |    
T  21780784 tctgtctgtgtaccagtcaaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattga 21780685  T
Q  110 agca 113  Q
    ||||    
T  21780684 agca 21780681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 22523706 - 22523803
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||| |||||||||||| ||| ||||  ||||| |||||||||   | || || |||| ||||||||||||  |||||||||| |||||||||||    
T  22523706 ccagtcaaagcaaagactctcccaatagtttgcgccttcttaggcttcttgcattgcgaaccaatgtgaccttcctcattgcaattgaagcacacaat 22523803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 16268629 - 16268589
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  16268629 ctcttgtggcctttctcaccacacttgtaacaaacaatctc 16268589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 28984287 - 28984327
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| ||| |||| ||||||||    
T  28984287 ctcttgtggcctttctcaccacacttgtaacaaacaatctc 28984327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 29300974 - 29300910
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| |||||||||||||| ||||| || ||||||||| ||||||| ||| || | |||||||||    
T  29300974 tcttcggctgagtacactgagaactgatatgaccttcttcattgcagttatagtagacaatgtcc 29300910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 22388 - 22629
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22388 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 22487  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  22488 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcggggcagacgttgct 22587  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22588 cttgtggcctttctcaccacaattgaaacacacaatctctgc 22629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 7377 - 7618
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7377 tcattctctgtctgagtcccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 7476  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  7477 aattaaagcaaacaatgtctgtacggttgcaatcagctacaacatgacccttcttaccacaccggacacacttcttgatttcctcggggcagacgttgct 7576  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7577 cttgtggcctttctcaccacaattgaaacacacaatctctgc 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 3571 - 3805
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3571 tctgtctgagtaccagtcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcaattaa 3670  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||| | |||||||| | |||||||||| |||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  3671 aacacacaatgtccgtacgcttgcattcagctacaataggacctttcttaccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtg 3770  T
Q  210 gcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||| |||||||||||||||||||||||||||    
T  3771 gcctttcccaccacaattgaaacacacaatctctg 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 17301 - 17539
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| |||||||||||||| ||  | || || |||| ||| ||||| ||| ||||||    
T  17301 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttaggttgtttgcattgggaaccaatatgaccctcttcattgc 17400  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| |   ||| |||||| | |||||| || ||||||||||||||||| ||||| || || || || || ||  | ||    
T  17401 aattgaagcacacaatatcattacgctaaaaatcagctactatatgacccttattgccacaccggacacatttctttatctcttctggacaaacattact 17500  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17501 cttgtggcctttctcaccacaattgaaacagacaatctc 17539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 11610 - 11848
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||| || ||| ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11610 tcattctccgtctgcgtaccattcaaagcaaagaccctaccagtagtcggcaccctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 11709  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| ||||||||||||||||| ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11710 agttaaaacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgcgacaccggacacacttcttgatttcctcagggcagacgttgct 11809  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
     |||||||||||| |||||||||||||||||||||||||    
T  11810 tttgtggcctttcccaccacaattgaaacacacaatctc 11848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 21138 - 21376
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||| || ||| ||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21138 tcattctccgtctgcgtaccattcaaagcaaagaccctactagtagtcggcgtcctcttaggctgagtacactgtgaactaatgtgaccctctccattgc 21237  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| ||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21238 agttaaaacacacaatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgttgct 21337  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
     |||||||||||| |||||||||||||||||||||||||    
T  21338 tttgtggcctttcccaccacaattgaaacacacaatctc 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 55145 - 55380
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || || ||| ||||||    
T  55145 tcattctccgtctgagttccagtcaaagcaaagaccctaccagtagttggcgccctcttaggctgagtacactgagaactaatatgtccctcttcattgc 55244  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| || |||||||||  ||| ||||||| || ||| | |||||| |||||||||||||||||||||||||| ||||| ||||| ||  |  ||||    
T  55245 agttaaaacatacaatgtcctgacgcttgcaatcagatactatatgacccttcttgccacaccggacacacttcttaatttcttcaggacaaccattgct 55344  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||  ||||||| ||||| ||||||||    
T  55345 cttgtggccttttccaccacagttgaagcacacaat 55380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 10518 - 10747
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    ||||| || ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |    
T  10518 gtctgcgtaccagtcaaaacaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctttccattgcagttaaaac 10617  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||| |||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  10618 acataatgtccgtacgcttgcattcagctacaatatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcc 10717  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| |||||||||||||||||||||||||    
T  10718 tttcccaccacaattgaaacacacaatctc 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 150; Significance: 2e-79; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 41305 - 41534
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |    
T  41305 gtctgagtaccagtcaaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaac 41404  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    |||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||| | || ||||| || ||  |||| ||||||||    
T  41405 acacaatgtccgtacgcttgcaatcagctacaatatgacccttcttgccacaccagacacacttcttgctctcttcaggacaaacattgcttttgtggcc 41504  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    |||| |||||||||||||||||||||||||    
T  41505 tttcccaccacaattgaaacacacaatctc 41534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 13287 - 13052
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| |||  |||| ||||||||||||||||| || || || |||| ||||||||| ||| |||| |    
T  13287 tcattctctgtctgagtaccagccagagcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgcgaaccaatgtgaccctcttcattac 13188  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||| ||||||| |||||||| |||||| ||||| ||||||| |||||| |||||||| || ||||| || ||  | ||    
T  13187 agttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattact 13088  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||||| |||||||| |||||    
T  13087 cttgtggcctttcccgccacagttgaaacaaacaat 13052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 85 - 314
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  85 tctgtctgagtaccaatcaaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaa 184  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||| ||||| || || ||||| || ||  |||| |||||    
T  185 aacacacaatgtccgtacgcttgcaatcagctacaaaatgacccttcttgccacaccggacacatttcttaatctcttcaggacaaacattgcttttgtg 284  T
Q  210 gcctttctcaccacaattgaaacacacaat 239  Q
    ||||||| ||||| ||||||||||||||||    
T  285 gcctttcccaccataattgaaacacacaat 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 8408 - 8637
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| |||||  || ||||||||||||||||||||||||||||||||||||||||||||||| || || ||  ||||| | ||||| |    
T  8408 gtctgagtaccagtcaaagcaataaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcatcattgtagttaaaac 8507  T
Q  113 acacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcc 212  Q
    ||||||||||| |||| ||||||| |||||||| |||||| |||||||||||| |||||||||||||||| || ||||| |||||  |||| ||||||||    
T  8508 acacaatgtccttacgcttgcaatcagctacaatatgacccttcttgccacactggacacacttcttgatctcttcaggacagacattgcttttgtggcc 8607  T
Q  213 tttctcaccacaattgaaacacacaatctc 242  Q
    | || |||||||||||||||||||||||||    
T  8608 tctcccaccacaattgaaacacacaatctc 8637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 424455 - 424687
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| | ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  424455 tctgtctgagtacaagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactgatgtgaccctcttcattgcagttaa 424554  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | ||||||||||||  ||| ||||||| |||||||| |||||| ||||||||||| |||||||| ||||| || || ||||| || ||  |||| |||||    
T  424555 aacacacaatgtcctcacgcttgcaatcagctacaatatgacccttcttgccacatcggacacatttcttaatctcttcaggacaaacattgcttttgtg 424654  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||| ||||||| ||||| |||||||||||    
T  424655 gcctttcacaccacagttgaagcacacaatctc 424687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 48806 - 49037
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| |||||||| || || ||| ||||||    
T  48806 tcattctccgtctgagtcccagtcaaaggaaagaccctaccagtagtcggcgccctcttaggctgagtacactgagaactaatttgtccctcttcattgc 48905  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | ||||| || ||||||||   ||| ||||||| |||||| | |||||| |||||||||||  ||||||||||||| ||||| ||||| ||  |  ||||    
T  48906 agttaaaacatacaatgtcttgacgcttgcaatcagctactatatgacccttcttgccacattggacacacttcttaatttcttcaggacaaccattgct 49005  T
Q  204 cttgtggcctttctcaccacaattgaaacaca 235  Q
    ||||||||||||| ||||| | ||||||||||    
T  49006 cttgtggcctttcccaccatagttgaaacaca 49037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 643 - 405
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||| ||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| ||||      
T  643 tcattctctgtctgagtaccagccagagaaaaaactcgacccgtagtaggcgccctctttggctgcttgcattgggaaccaatatgaccctcttcattaa 544  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| | |||||| |||||| |||||||||||||||||||| |||||||| |||||||| || ||  ||||    
T  543 aattgaagcacacaatatcatttcgcttgcaatcatctacaatatgacccttcttgccacaccggacacatttcttgatctcctcaggacaaacattgct 444  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  443 cttgtggcctttctcgccacaattgaaacaaacaatctc 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 10321 - 10083
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| |||| || || |||||| ||||||||||||||||||||||||||||||||  | ||||| |||| ||||||||| ||| | ||||    
T  10321 tcattctctgtctgtgtcctagccaaagcaaaaactctaccagtagtcggcgccctcttaggctgcttgcactgagaaccaatgtgaccctcttccttgc 10222  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | || |||| |||||    |||||| |||||||||||||||| ||| ||||| |  |||||  | || ||  ||||    
T  10221 aattgaagcacacaatatcactatgcttacaatcagctaatgtatgacccttcttgccacaccggaaacatttctttacctcctctagacaaacattgct 10122  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10121 cttgtggcctttctcaccacaattgaaacagacaatctc 10083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 15204 - 14966
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| | || ||||||||||||  | || || |||| ||| ||||| ||| ||||||    
T  15204 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtagacgtcctcttaggctgcttgcattgggaaccaatatgaccctcttcattgc 15105  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| || |||||||| ||  |||| ||||||| |||||| | |||||| |||||||||||||||||||| ||||| || || || || || ||  ||||    
T  15104 aattgaatcacacaatatcattacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgct 15005  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  15004 cttgtggcctttctcaccacaattaaaacagacaatctc 14966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 11513 - 11281
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| |||| ||||||||| |||| ||| ||||| | || ||||||||||||  | || || |||| ||| ||||| ||| |||||||||| |    
T  11513 tctgtctgagtaccagccagagcaaaaactcgacccgtagtagacgtcctcttaggctgcttgcattgggaaccaatatgaccctcttcattgcaattga 11414  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    | |||||||| ||  |||| ||||||| |||||| | |||||| |||||||||||||||||||| ||||| || || || || || ||  ||||||||||    
T  11413 atcacacaatatcattacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtg 11314  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||| ||||| ||||||||    
T  11313 gcctttctcaccacaattaaaacagacaatctc 11281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 20 - 255
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| |||  |||| ||||||||||||||||| || || || |||| ||||||||| ||| |||| |    
T  20 tcattctctgtctgagtaccagccagagcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgcgaaccaatgtgaccctcttcattac 119  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||| ||||||| |||||||| |||||| ||||| ||||||| |||||| |||||||| || ||||| || ||  | ||    
T  120 agttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattact 219  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||||| |||||||| |||||    
T  220 cttgtggcctttcccgccacagttgaaacaaacaat 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 7942 - 7707
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||||||||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||||||||| ||| |||| |    
T  7942 tcattttctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatgtgaccctcttcattac 7843  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || ||||||||||| ||  |||  ||||||| ||||| || |||||| |||||||||||||||||||| |||||||| || ||||| || ||  | ||    
T  7842 agttgaagcacacaatatcattacttttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattact 7743  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||||| |||||||| |||||    
T  7742 cttgtggcctttcccgccacagttgaaacaaacaat 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 10401 - 10167
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| |||  |||| ||||||||||||||||| || || ||||||| |||||||||| || |||| |    
T  10401 tcattctctgtctgagtaccagccagagcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgtgaaccaatgtgacct-cttcattac 10303  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||||| |||||| ||||| |||||||||||||| |||||||| || ||||| || ||  | ||    
T  10302 aattgaagcacacaatatcattatgcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattact 10203  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||| | |||||||| |||||    
T  10202 cttgtggcctttcccgccatagttgaaacaaacaat 10167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 13056 - 12822
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| |||  |||| ||||||||||||||||| || || ||||||| |||||||||| || |||| |    
T  13056 tcattctctgtctgagtaccagccagagcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgtgaaccaatgtgacct-cttcattac 12958  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||||| |||||| ||||| |||||||||||||| |||||||| || ||||| || ||  | ||    
T  12957 aattgaagcacacaatatcattatgcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattact 12858  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||| | ||| | |||||||| |||||    
T  12857 cttgtggcctttcccgccatagttgaaacaaacaat 12822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 32020 - 32258
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || ||||||| |||||| || |||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| | ||||    
T  32020 tcattctctgtctgtgtaccagtcaaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcgttgc 32119  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
     ||  || |||||||| ||  || | ||||||| |||||   ||||||  ||||| |||||||||| |||  | || |  ||  |||| ||  |  ||||    
T  32120 gatcgaaacacacaatatcattatgtttgcaatcagctaatgcatgactcttcttaccacaccggaaacatctttttacctctccaggacaagcattgct 32219  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||| |||||||| ||||| ||||||||    
T  32220 cttgtggcctttctcgccacaattaaaacagacaatctc 32258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 37486 - 37651
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || ||||||| |||||| || |||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| | ||||    
T  37486 tcattctctgtctgtgtaccagtcaaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcgttgc 37585  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccgga 169  Q
     ||  || |||||||| ||  || | ||||||| |||||   ||||||  ||||| ||||||||||    
T  37586 gatcgaaacacacaatatcattatgtttgcaatcagctaatgcatgactcttcttaccacaccgga 37651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 54796 - 54893
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||| |||||| ||||||| ||||| ||||||| |||||||||   ||||||  |||| ||||||||| ||| ||||||||||||| ||||||||    
T  54796 ccagtcaaagcaaatactctactagtagccggcgccttcttaggcttcttacactacgaaccaatgtgaccctcttcattgcaattaaaacacacaat 54893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 14195 - 13957
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| || |||||| |||  ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||| ||||||    
T  14195 tcattctctgtctgagtaccagccatagcaaaaacttgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattgc 14096  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  |||| ||||||| |||||| | | |||| ||||||||||||| |||||| ||||| || || || || || ||  ||||    
T  14095 aattgaagcacacaatatcattacgcttgcaatcagctactatacgacccttcttgccacacctgacacatttctttatctcttctggacaaacattgct 13996  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  13995 cttgtggcctttctcaccacaattaaaacagacaatctc 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 171259 - 171488
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||| ||||| || || || ||||  || ||||| ||| |||| |    
T  171259 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctcttcggctgcgtgcattgggaaccgatatgaccctcttcattac 171358  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || |||||| |||| ||  |||| ||||||| |||||||| ||||||||||||||||||||| ||||| |||||||| ||  |||| || ||  | ||    
T  171359 agttgaagcacgcaatatcattacgcttgcaatcagctacaatatgacctttcttgccacaccgaacacatttcttgatctctacaggacaaacattact 171458  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||| ||||    
T  171459 cttgtggcctttctcaccacaattgtaaca 171488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 1 - 217
Alignment:
Q  14 tctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| |||| || |||||| |||| ||| ||||| |||||||||||||||||  | || || |||| ||| ||||| ||| |||| ||||| |||||    
T  1 tctgagtaccagccaaagcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagca 100  T
Q  114 cacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcct 213  Q
    |||||| ||  | || ||||||| ||||||||||||||| ||||| |||||||||||||| |||||||| ||  |||| || ||  | ||||||||||||    
T  101 cacaatatcatttcgcttgcaatcagctacaacatgacccttcttaccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcct 200  T
Q  214 ttctcaccacaattgaa 230  Q
    |||||||||||||||||    
T  201 ttctcaccacaattgaa 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 139639 - 139547
Alignment:
Q  138 agctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaa 230  Q
    |||||||| |||||| |||||||||||||||||||| |||||||| ||  |||| || ||  | |||||||||||||||||||||||||||||    
T  139639 agctacaatatgacccttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaattgaa 139547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 36639 - 36877
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||| || |||| || |||||| |||||||||||||||||||||||||||  |||  | || || |||| ||| ||||| ||| | ||||    
T  36639 tcattctcggtctgtgtaccagccaaagcaaaaactctaccagtagtcggcgccctcttaaactgcttgcattgagaaccaatatgaccctcttccttgc 36738  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||||||||||||||| ||  |||| ||||||| |||||    |||||| |||||||||||||||| ||| ||||| |  ||||| || || ||  ||||    
T  36739 aattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctggacaaacattgct 36838  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||||| || |||||    
T  36839 cttgtggcctttctcaccacaattgaaacagacgatctc 36877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 932 - 703
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||  ||||||||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| | || |    
T  932 tcattctctgtctgagtaccatccagagcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcgttac 833  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  | || ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| ||  |||| || ||  | ||    
T  832 aattgaagcacacaatatcatttcgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctctacaggacaaacattact 733  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||| ||||||||||||||||||||||    
T  732 cttgtggtctttctcaccacaattgaaaca 703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 230009 - 229777
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||||||| |||| ||||||||| | ||  || ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| | |||||||| |    
T  230009 tctgtctgagtaccagccagagcaaaaattcgtcccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcgttgcaattga 229910  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    |||||||||| ||  || | ||||||| |||||  | |||||| |||||||||||||||||||| ||||| || || || || || ||  ||||||||||    
T  229909 agcacacaatatcattaagcttgcaatcagctattatatgacccttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtg 229810  T
Q  210 gcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||||||    
T  229809 gcctttctcaccacaattgaaacaaacaatctc 229777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 251961 - 251998
Alignment:
Q  205 ttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  251961 ttgtggcctttttcaccacacttgaaacacacaatctc 251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 5139 - 5377
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || |||| ||||||||| |||| ||| ||||| || |||||||| |||||  | || || |||| ||| ||||| ||| ||||||    
T  5139 tcattctctgtctgggtaccagccagagcaaaaactcgacccgtagtaggtgccctcttcggctgcttgcattgggaaccaatatgaccctcttcattgc 5238  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| || |||||||| ||  | || ||||||| |||||||| |||||| ||||||||||||| |||||| |||||||| || ||||| || ||  | ||    
T  5239 aattgaaccacacaatatcatttcgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattact 5338  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||| ||||| ||||| ||||| |||||||| ||||||||    
T  5339 cttatggcccttctcgccacagttgaaacaaacaatctc 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 15742 - 15513
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||| || |||| || |||||| |||||||||||||| |||||||||||||||||  | ||||| ||||  || ||||| ||  ||||||    
T  15742 tcattctcggtctgtgtaccagccaaagcaaaaactctaccagtagttggcgccctcttaggctgcttgcactgagaaccgatatgaccctcatcattgc 15643  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||||||  |  | ||||||| |||||    |||||| |||||||||||||||| |||||||||    ||||| || || |   ||||    
T  15642 aattgaagcacacaatgtcattgtgcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgct 15543  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  15542 cttgtggcctttctcaccacaattgaaaca 15513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 21745 - 21983
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| |||||| | ||||||||||||||||||| ||||||||||  | ||||  |||| ||||||||| ||| ||||||    
T  21745 tcattctcggtctgagtaccagtcaaagcaaaaagtctaccagtagtcggcgccttcttaggctgcttgcactaagaaccaatgtgaccctcttcattgc 21844  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||   ||||||| ||||| ||||| |||| |||  |||| || ||   ||| ||  |  || |    
T  21845 aattgaagcacacaatatcattatggttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgat 21944  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  21945 cttgtggcctttctcaccacaattaaaacagacaatctc 21983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 37169 - 37407
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| |||||| | ||||||||||||||||||| ||||||||||  | ||||  |||| ||||||||| ||| ||||||    
T  37169 tcattctcggtctgagtaccagtcaaagcaaaaagtctaccagtagtcggcgccttcttaggctgcttgcactaagaaccaatgtgaccctcttcattgc 37268  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||||||||| ||  || | ||||||| |||||   ||||||| ||||| ||||| |||| |||  |||| || ||   ||| ||  |  || |    
T  37269 aattgaagcacacaatatcattatggttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgat 37368  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  37369 cttgtggcctttctcaccacaattaaaacagacaatctc 37407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 242
Target Start/End: Original strand, 14565 - 14803
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||| |||  ||| ||||||||| |||| ||| ||||| ||||||||||| |||||  | || || |||| ||| ||||| ||| |||| |    
T  14565 tcattctctgtctaagtatcagccagagcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcattac 14664  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| ||||| || || ||  |||| ||||||| |||||||| |||||  |||||||||||||||||||| |||||||| || ||| | || ||  | ||    
T  14665 aattgaagcatacgatatcattacgcttgcaatcagctacaatatgactcttcttgccacaccggacacatttcttgatctcttcaagacaaacattact 14764  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||| ||||| ||||| |||||||| ||||||||    
T  14765 cttgtggccattctcgccacacttgaaacaaacaatctc 14803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 1132 - 1241
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||| |||||||||   |||||||||||| ||||||||| ||   ||||||||||||||    
T  1132 gtctgagtaccagtcaaagcaaaaactctaccagtagtcggcgccttcttaggcttcttacactgtgaaccaatgtgaccctcctaattgcaattaaagc 1231  T
Q  113 acacaatgtc 122  Q
    ||||||||||    
T  1232 acacaatgtc 1241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 23 - 170
Alignment:
Q  98 cattgcaattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagac 197  Q
    |||||||||| ||||||||||||||  |||| ||||||| | |||    ||||||||||||||||| ||| | ||  ||||| |  |||||||| || ||    
T  23 cattgcaattgaagcacacaatgtcattacgcttgcaatcaactaatgtatgacctttcttgccacgccgaaaacttttcttcacctcctcaggacaaac 122  T
Q  198 gatgctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
      |||||||||||||||||||||||||||||||||| |||||||||||    
T  123 attgctcttgtggcctttctcaccacaattgaaacagacaatctctgc 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 9094 - 9196
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||||||| ||||||| ||||||||||  |||||||||||| ||||||||| ||| ||||||| ||||    
T  9094 tctgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggctgcttacactgtgaaccaatgtgaccctcttcattgcagttaa 9193  T
Q  110 agc 112  Q
    |||    
T  9194 agc 9196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 3701 - 3807
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  ||||| ||||||||||||||| ||||| |||||||||   | |||||||||| ||||||||||||  |||||||||||||||    
T  3701 gtctgagtaccagtcaatgcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgtgaaccaatgtgaccttcctcattgcaattaaagc 3800  T
Q  113 acacaat 119  Q
    |||||||    
T  3801 acacaat 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 181 - 299
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||  | ||||| |||| ||||||||| ||| |||| |    
T  181 tcattctcggtctgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattac 280  T
Q  104 aattaaagcacacaatgtc 122  Q
    |||| ||||||||||||||    
T  281 aattgaagcacacaatgtc 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 377 - 419
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  377 tgctcttgtggcctttctcaccacaattaaaacaaacaatctc 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 231
Target Start/End: Original strand, 3011 - 3232
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    ||||||| ||| |||| ||||||||| |||| ||| ||||| |||||||| ||||||||  | || || |||| ||| ||||| ||  | ||||||||||    
T  3011 tctgtctaagtaccagccagagcaaaaactcgacccgtagtaggcgccctattaggctgcttgcattgggaaccaatatgaccctcctctttgcaattaa 3110  T
Q  110 agcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtg 209  Q
    ||||||| ||||| | | | ||||||| |||||     ||||| |||||||||||||||| ||||||||  |  |||||||| ||  |  | ||||||||    
T  3111 agcacacgatgtcagcatgtttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtg 3210  T
Q  210 gcctttctcaccacaattgaaa 231  Q
    ||||||||||||||||||||||    
T  3211 gcctttctcaccacaattgaaa 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 14234 - 14331
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaa 110  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||   | |||||||||| ||||||||| ||| |||||||||||||    
T  14234 gtctgagtaccagtcagagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcaattaaa 14331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 11602 - 11645
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  11602 ctcttgtggcctttctcaccacaagtaaaacagacaatctctgc 11645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 11423 - 11510
Alignment:
Q  22 ccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaa 110  Q
    ||||||| |||||| ||||||||||||| |||| || |||||||||   | ||||| |||| |||||| || ||| |||||||||||||    
T  11423 ccagtcaaagcaaaaactctaccagtagccggcaccttcttaggcttcttgcactgggaaccaatgtg-ccctcttcattgcaattaaa 11510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 17512 - 17272
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    |||||||||||||| || ||||| | |||||| |||||||||||||||||||||  ||||||||   | |||||||||| ||||||||| ||| ||||||    
T  17512 tcattttctgtctgtgtaccagttaaagcaaacactctaccagtagtcggcgcctgcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgc 17413  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | |||||||| ||||| ||   | | ||||| | |||||   ||||||| ||||| ||||| |||| |||  ||||| | ||| |||| ||  |  | ||    
T  17412 agttaaagcatacaatatcatcatgtttgcactcagctagtgcatgacccttcttcccacatcggaaacatctcttggtatccccaggacaagcattact 17313  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctctg 244  Q
    ||||||||| ||||||||||||   ||||| ||||||||||    
T  17312 cttgtggcccttctcaccacaagaaaaacaaacaatctctg 17272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 36983 - 36851
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| | ||||| |||||| ||||||||||||||||||||| ||||||| ||  | ||||  |||| ||||||||| ||| ||||||    
T  36983 tcattctcggtctgagtactagtcaaagcaaaaactctaccagtagtcggcgccttcttaggttgcttgcactaagaaccaatgtgaccctcttcattgc 36884  T
Q  104 aattaaagcacacaatgtccgtacgattgcaat 136  Q
    |||| ||||||||||||||  |||| |||||||    
T  36883 aattgaagcacacaatgtcattacggttgcaat 36851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 8370 - 8473
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||||||| ||||||| |||||||||   | |||||||||| ||||||||||||| ||| ||||||||    
T  8370 tctgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttccactgtgaaccaatgtgaccttcttcatcgcaattaa 8469  T
Q  110 agca 113  Q
    ||||    
T  8470 agca 8473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 41773 - 41888
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||||||  |||||| |||||| ||||||||||||||| ||||| |||||||||   | ||||| |||| ||||||||||||  ||||||    
T  41773 tcattctcagtctgagtagcagtcaaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgc 41872  T
Q  104 aattaaagcacacaat 119  Q
    ||||||||||||||||    
T  41873 aattaaagcacacaat 41888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 75493 - 75608
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||||||  |||||| |||||| ||||||||||||||| ||||| |||||||||   | ||||| |||| ||||||||||||  ||||||    
T  75493 tcattctcagtctgagtagcagtcaaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgc 75592  T
Q  104 aattaaagcacacaat 119  Q
    ||||||||||||||||    
T  75593 aattaaagcacacaat 75608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 34868 - 34763
Alignment:
Q  14 tctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| ||||||| ||| || || |||||||||||||||||| |||||||| |  ||||||| |||| ||||||||| ||| |||| || || |||||    
T  34868 tctgagtaccagtcaaagcgaaaaccctaccagtagtcggcgccttcttaggcagcttacactgcgaaccaatgtgaccctcttcattacagttgaagca 34769  T
Q  114 cacaat 119  Q
    ||||||    
T  34768 cacaat 34763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 194974 - 194883
Alignment:
Q  31 gcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtc 122  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||  |||| ||||||||| ||   ||||||||||||||||||||||||    
T  194974 gcaaaaactctaccagtagtcggcgccttcttaggctgcgtacactacgaaccaatgtgaccctccttattgcaattaaagcacacaatgtc 194883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 17229 - 17000
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||  |||| ||| |||||||| |||||||||||||||||||||||  ||||||| || | ||| ||||| ||| | ||||    
T  17229 tcattctctgtctgagtaccagctagagaaaaaactctacccgtagtcggcgccctcttaggctgcttacactgggacccaatatgaccctcttctttgc 17130  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || || ||||| || ||   | | ||||| | |||||     ||||| ||||||||||||| || ||| ||||| |  ||||| || || ||  ||||    
T  17129 agttgaaacacacgatatcaccatgcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgct 17030  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  17029 cttgtggcctttctcaccacaattgaaaca 17000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 30437 - 30547
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||| |||||||||  ||||||||||||| ||| ||||||||  | | ||| ||||| |    
T  30437 gtctgagtaccagtcaaagcgaaaactctaccagtagtcggcgccttcttaggctccgtacactgtgaaccaatatgaccttcctcttcgcagttaaaac 30536  T
Q  113 acacaatgtcc 123  Q
    |||||||||||    
T  30537 acacaatgtcc 30547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 30737 - 30499
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || ||||||| ||||||||||||| ||||||  ||  | ||||| |||| ||||| ||| ||| ||||||    
T  30737 tcattctcagtctgagtaccagtcaaagcgaaaactctactagtagtcggcgccttcttagattgcttgcactgagaaccaatgtaaccctcttcattgc 30638  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    |||| |||||||||| |||  || | ||||||| |||||   ||||||| ||||| ||||| |||| |||  |||| |  ||  | || ||  |  ||||    
T  30637 aattgaagcacacaaggtcattatgtttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctcctggacaagcattgct 30538  T
Q  204 cttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  30537 cttgtggcctttctcaccacaattaaaacagacaatctc 30499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 43547 - 43501
Alignment:
Q  73 cactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    |||||||||| |||||||||||   ||||||||||||||||||||||    
T  43547 cactgtgaaccaatgtgacctttctcattgcaattaaagcacacaat 43501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 15058 - 15167
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||||||||||||||||| || |||| |||||||||   | |||||||||| ||||||||| ||| ||||||| ||||    
T  15058 tctgtctgtgtaccagtcaaagcaaagactctaccagtagccgacgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcagttaa 15157  T
Q  110 agcacacaat 119  Q
    |||| |||||    
T  15158 agcatacaat 15167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 2426 - 2311
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| |||||||| || |||||||||||||| ||||||||||||| |||| || |||||||||   |||||| ||||| ||||||||| ||| |||||     
T  2426 tcattctctgtctgtgtaccagtcagagcaaaaactctaccagtagccggcaccttcttaggctacttacactatgaaccaatgtgaccctcttcattgt 2327  T
Q  104 aattaaagcacacaat 119  Q
    | |||||||| |||||    
T  2326 agttaaagcatacaat 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 7820 - 7705
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||||||| ||| || || |||||||||||||||||| ||||||||||  | ||| | |||| ||||||||| ||| ||||||    
T  7820 tcattctcggtctgagtaccagtcaaagcgaaaaccctaccagtagtcggcgccttcttaggctgcttgcaccgagaaccaatgtgaccctcttcattgc 7721  T
Q  104 aattaaagcacacaat 119  Q
    |||| |||||||||||    
T  7720 aattgaagcacacaat 7705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 7624 - 7582
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  7624 tgctcttgtggcctttctcaccacaattaaagcagacaatctc 7582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 291 - 493
Alignment:
Q  40 ctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtccgtacgattgcaataag 139  Q
    |||||||||||||||||| ||||||||||  | ||||| |||||||| ||||| ||| | |||||||| ||||||||||| ||  || | ||||||| ||    
T  291 ctaccagtagtcggcgccttcttaggctgcttgcactgagaactaatatgaccctcttctttgcaattgaagcacacaatatcattatgcttgcaatcag 390  T
Q  140 ctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaacacacaat 239  Q
    |||   ||||||| ||||| |||||| ||| |||  | || |  || |  ||  | ||  |||||||||||||||||||||||||||| ||||| |||||    
T  391 ctaatgcatgacccttcttaccacactggaaacatctttttacctctttcggaaaaacattgctcttgtggcctttctcaccacaattaaaacagacaat 490  T
Q  240 ctc 242  Q
    |||    
T  491 ctc 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 74 - 156
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttc 95  Q
    |||||||| ||||||| ||| || |||||||||||||||||| || |||||||||  ||||||||||||||||| ||||||||    
T  74 gtctgagtaccagtcaaagcgaaaactctaccagtagtcggcaccttcttaggcttcgtacactgtgaactaatatgaccttc 156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 261 - 303
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  261 tgctcttgtggcctttctcaccacaattaaagcagacaatctc 303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 8557 - 8667
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggc-tgagtacactgtgaactaatgtgaccttctccattgcaatta 108  Q
    |||||||| || ||||||| |||||| ||||||||||||||||||||| |||||||| |   | |||||||||| ||||||||| ||| ||||||| |||    
T  8557 tctgtctgtgtaccagtcaaagcaaacactctaccagtagtcggcgccttcttaggctttcttgcactgtgaaccaatgtgaccctcttcattgcagtta 8656  T
Q  109 aagcacacaat 119  Q
    ||||| |||||    
T  8657 aagcatacaat 8667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 18800 - 18906
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  ||||| ||||||||| ||||| ||||| |||||||||   ||||| | |||| ||||||||||||  |||||||||||||||    
T  18800 gtctgagtaccagtcaatgcaaaaactctaccaatagtctgcgccttcttaggcttcttacacagcgaaccaatgtgaccttcctcattgcaattaaagc 18899  T
Q  113 acacaat 119  Q
    |||||||    
T  18900 acacaat 18906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 11037 - 10928
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||||||| ||||||| |||||||||   | |||||||||| ||||||||| ||| ||||| | ||||    
T  11037 tctgtctgtgtaccagtcaaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgtagttaa 10938  T
Q  110 agcacacaat 119  Q
    |||| |||||    
T  10937 agcatacaat 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 111070 - 110961
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || ||||||||  |||||| |||||| ||||||||||||||| ||||| |||||||||   | ||||| |||| ||||||||||||  ||||||    
T  111070 tcattctcagtctgagtttcagtcaaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgc 110971  T
Q  104 aattaaagca 113  Q
    ||||||||||    
T  110970 aattaaagca 110961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 50498 - 50390
Alignment:
Q  14 tctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| |||||||  ||||| ||||| ||||||||||||||| | |||||||  ||||| ||||||| ||| ||||| ||| |||| ||||| |||||    
T  50498 tctgagtaccagtcaacgcaaaaactcttccagtagtcggcgcctttttaggcttcgtacattgtgaaccaatatgaccctcttcattacaattgaagca 50399  T
Q  114 cacaatgtc 122  Q
    |||||||||    
T  50398 cacaatgtc 50390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 191 - 273
Alignment:
Q  37 actctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||||||||| | ||||| |||||||||   ||||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  191 actctaccagtagcctgcgccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaat 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 4608 - 4690
Alignment:
Q  37 actctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||||||||| | ||||| |||||||||   ||||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  4608 actctaccagtagcctgcgccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaat 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 282 - 511
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||| ||| ||| |||| ||||||||| |||| ||| | ||| |||||| ||||||||||  | || || |||| ||| ||||| ||  | ||||    
T  282 tcattctctttctaagtaccagccagagcaaaaactcgacccgcagtaggcgccttcttaggctgcttgcattgggaaccaatatgaccctcctctttgc 381  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    ||||||||||||| ||||| | | | ||||||| | |||     ||||| |||||||||||||||| ||||| ||| |  |||||| | ||  |  | ||    
T  382 aattaaagcacacgatgtcagcatgcttgcaatcaactaatgtgtgacccttcttgccacaccggaaacactccttcacctcctcacgacaagcagtact 481  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||||||||||||||||||    
T  482 cttgtggcctttctcaccacaattgaaaca 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 2140 - 2245
Alignment:
Q  14 tctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||||| | |||||  ||||| ||||||||||||||| ||||  |||||||||   | |||||||||| ||||||||||||  ||||||||||||| ||    
T  2140 tctgagtactagtcaatgcaaaaactctaccagtagtctgcgcattcttaggcttcttgcactgtgaaccaatgtgaccttcctcattgcaattaaaaca 2239  T
Q  114 cacaat 119  Q
    ||||||    
T  2240 cacaat 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 24869 - 24766
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||| ||||||||||||| |||||||||   | |||||||||| ||||||||  ||  ||||||| ||||    
T  24869 tctgtctgtgtaccagtcaaagcaaaaactctacaagtagtcggcgccttcttaggcttcttgcactgtgaaccaatgtgacgctcctcattgcagttaa 24770  T
Q  110 agca 113  Q
    ||||    
T  24769 agca 24766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 1112 - 1026
Alignment:
Q  147 atgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattgaaaca 233  Q
    |||||| |||||||||||||||| ||| ||||| |  ||||| || || || ||||||||| |||||||||| ||||||||||||||    
T  1112 atgacccttcttgccacaccggaaacatttctttacctcctctggacaaacaatgctcttgcggcctttctcgccacaattgaaaca 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1195 - 1137
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctctt 62  Q
    ||||| |||||||| || ||||  |||||||| || |||||||||||||||||||||||    
T  1195 tcattctctgtctgtgtaccagctagagcaaaaaccctaccagtagtcggcgccctctt 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 7014 - 7128
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||| ||||| ||||||||| | ||| |||||||||   |||| || |||| ||| ||||||||  ||||||    
T  7014 tcattctctgtctgagtaccagtcaaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgc 7113  T
Q  104 aattaaagcacacaa 118  Q
    |||| || |||||||    
T  7114 aattgaaacacacaa 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 14144 - 14258
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||| ||||| ||||||||| | ||| |||||||||   |||| || |||| ||| ||||||||  ||||||    
T  14144 tcattctctgtctgagtaccagtcaaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgc 14243  T
Q  104 aattaaagcacacaa 118  Q
    |||| || |||||||    
T  14244 aattgaaacacacaa 14258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 23696 - 23590
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| ||||||| |||||| ||||| ||||||||| ||||| |||||||||   |||| || |||| ||| ||||||||  ||||||    
T  23696 tcattctctgtctgagtaccagtcaaagcaaaaactctcccagtagtctgcgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgc 23597  T
Q  104 aattaaa 110  Q
    | |||||    
T  23596 agttaaa 23590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 153698 - 153751
Alignment:
Q  69 agtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtc 122  Q
    ||||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||    
T  153698 agtacactgcgaactaatgtgaccttcctcattgcagttatagcaaacaatgtc 153751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 7798 - 7907
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| || |||||||| ||| ||| |||||| ||||||| ||||||| | ||| |||||||||   | ||||| |||| ||||||||||||  ||||||    
T  7798 tcattctcagtctgagtaccaatcaaagcaaaaactctactagtagtctgtgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgc 7897  T
Q  104 aattaaagca 113  Q
    ||||||||||    
T  7898 aattaaagca 7907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 29091 - 28862
Alignment:
Q  4 tcattttctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgc 103  Q
    ||||| ||||||||||| |||| ||||||||| |||| ||| ||||| ||||||||||| || ||  | || || |||| ||| ||||| ||| | ||||    
T  29091 tcattctctgtctgagtaccagccagagcaaaaactcgacccgtagtaggcgccctctttggttgcttgcattgggaaccaatatgaccctctactttgc 28992  T
Q  104 aattaaagcacacaatgtccgtacgattgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgct 203  Q
    | || || ||| |||| ||   | | ||||| | |||||     ||||| |||||||||||||||| ||| ||||| |  |||| ||| || ||  ||||    
T  28991 agttgaaacacgcaatatcaccatgcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgct 28892  T
Q  204 cttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||| ||||||||||||||    
T  28891 cttgtggcctttctcgccacaattgaaaca 28862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 3 - 115
Alignment:
Q  130 ttgcaataagctacaacatgacctttcttgccacaccggacacacttcttgatttcctcagggcagacgatgctcttgtggcctttctcaccacaattga 229  Q
    ||||||| ||||| |  |||||| |||||||||||||||| ||| ||||| |  ||||  || || ||  |||| ||||||||||||||||||||| |||    
T  3 ttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaatga 102  T
Q  230 aacacacaatctc 242  Q
    |||| ||||||||    
T  103 aacagacaatctc 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 1179 - 1279
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || ||||||| |||||| ||||||||| ||||||||||| |||||||||   | |||  ||||| ||||||||| ||| ||||||| ||||    
T  1179 tctgtctgtgtaccagtcaaagcaaaaactctaccattagtcggcgccttcttaggcttcatgcacaatgaaccaatgtgaccctcttcattgcagttaa 1278  T
Q  110 a 110  Q
    |    
T  1279 a 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 10960 - 11042
Alignment:
Q  37 actctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||| ||||||  || || |||||||||   ||||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  10960 actctactagtagtatgcaccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaat 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 3692 - 3790
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaag 111  Q
    |||||| | |||||||  ||||| ||||||| ||||||| ||||| |||||||||   | ||||| |||| ||||||||||||  ||||||||||||||    
T  3692 gtctgaataccagtcaatgcaaaaactctacaagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaag 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 40650 - 40564
Alignment:
Q  24 agtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaa 110  Q
    ||||| |||||| ||||||||||||| || | || |||||||||   | |||||||||| ||||||||| ||| |||||||||||||    
T  40650 agtcaaagcaaaaactctaccagtagccgacaccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcaattaaa 40564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 55624 - 55518
Alignment:
Q  13 gtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagc 112  Q
    |||||||| |||||||  ||||| ||||| ||||||||| ||||| ||||| |||   | || |||||||| || ||||||||  ||||||| |||||||    
T  55624 gtctgagtaccagtcaatgcaaaaactctcccagtagtctgcgccttcttaagcttcttgcattgtgaacttatatgaccttcctcattgcagttaaagc 55525  T
Q  113 acacaat 119  Q
    |||||||    
T  55524 acacaat 55518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 4651 - 4603
Alignment:
Q  71 tacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||||||||    
T  4651 tacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaat 4603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 343 - 300
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  343 ctcttgtggcctttctcaccacaagtaaaacagacaatctctgc 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 9408 - 9365
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctctgc 245  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  9408 ctcttgtggcctttctcaccacaagtaaaacagacaatctctgc 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 38 - 141
Alignment:
Q  10 tctgtctgagtcccagtcagagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaa 109  Q
    |||||||| || | ||||| |||||| ||| ||||||||||||||| | |||||||||   | ||||| |||| ||||||||| ||| |||| ||||| |    
T  38 tctgtctgtgtactagtcaaagcaaatactataccagtagtcggcgtcttcttaggcttcttgcactgggaaccaatgtgaccatcttcattacaattga 137  T
Q  110 agca 113  Q
    ||||    
T  138 agca 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 69548 - 69469
Alignment:
Q  40 ctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaat 119  Q
    ||||||||||||||| || |||||||||   | ||||| |||| ||||||||| ||| | |||||||| |||||||||||    
T  69548 ctaccagtagtcggcaccttcttaggctacttgcactgagaaccaatgtgaccctcttctttgcaattgaagcacacaat 69469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 1271 - 1229
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||    
T  1271 tgctcttgtggcctttctcaccacacttgtaacaaacaatctc 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 176326 - 176368
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctctg 244  Q
    |||||||||||||| |||||||| |||||||| ||||||||||    
T  176326 ctcttgtggcctttttcaccacacttgaaacagacaatctctg 176368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 514320 - 514278
Alignment:
Q  200 tgctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||    
T  514320 tgctcttgtggcctttctcaccacacttgtaacaaacaatctc 514278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 34676 - 34713
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaat 239  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  34676 ctcttgtggcctttctcaccacacttgaaacaaacaat 34713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 1595 - 1531
Alignment:
Q  59 tcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagcacacaatgtcc 123  Q
    |||| |||||||||||||| ||||| || ||||||||| ||||||| ||  |||| |||||||||    
T  1595 tcttcggctgagtacactgcgaactgatatgaccttcttcattgcagttgtagcaaacaatgtcc 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 24075 - 23999
Alignment:
Q  37 actctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccattgcaattaaagca 113  Q
    ||||| ||||||||| ||||| |||||||||   | || || |||| ||||||||||||  ||||||||||||||||    
T  24075 actctcccagtagtctgcgccttcttaggcttcttgcattgcgaaccaatgtgaccttcctcattgcaattaaagca 23999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 122142 - 122110
Alignment:
Q  201 gctcttgtggcctttctcaccacaattgaaaca 233  Q
    ||||||||||||||| |||||||||||||||||    
T  122142 gctcttgtggcctttttcaccacaattgaaaca 122110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 51990 - 52030
Alignment:
Q  202 ctcttgtggcctttctcaccacaattgaaacacacaatctc 242  Q
    ||||||||||||||||||||||| |||||||| | ||||||    
T  51990 ctcttgtggcctttctcaccacacttgaaacagataatctc 52030  T

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