View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0683_high_6 (Length: 518)

Name: NF0683_high_6
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0683_high_6
NF0683_high_6
[»] chr6 (5 HSPs)
chr6 (47-490)||(6911577-6912012)
chr6 (3-34)||(53853-53884)
chr6 (3-34)||(364530-364561)
chr6 (1-34)||(22050268-22050301)
chr6 (2-34)||(17601121-17601153)
[»] scaffold0242 (2 HSPs)
scaffold0242 (107-468)||(15206-15571)
scaffold0242 (107-468)||(24041-24406)
[»] scaffold0024 (2 HSPs)
scaffold0024 (295-490)||(157981-158174)
scaffold0024 (123-196)||(158214-158287)
[»] chr4 (12 HSPs)
chr4 (1-39)||(44069254-44069292)
chr4 (1-39)||(9834503-9834541)
chr4 (1-34)||(354189-354222)
chr4 (1-34)||(5374338-5374371)
chr4 (1-34)||(19093141-19093174)
chr4 (1-34)||(22828389-22828422)
chr4 (1-34)||(35231913-35231946)
chr4 (1-34)||(44013901-44013934)
chr4 (1-34)||(44217929-44217962)
chr4 (5-34)||(47251640-47251669)
chr4 (2-34)||(38009754-38009786)
chr4 (2-34)||(56576092-56576124)
[»] chr1 (10 HSPs)
chr1 (1-39)||(38648677-38648715)
chr1 (2-34)||(48264760-48264792)
chr1 (1-39)||(12231050-12231088)
chr1 (1-39)||(43500726-43500764)
chr1 (1-34)||(13566899-13566932)
chr1 (1-34)||(29830973-29831006)
chr1 (1-34)||(31487763-31487796)
chr1 (1-34)||(35531279-35531312)
chr1 (1-30)||(48508353-48508382)
chr1 (1-38)||(52649709-52649746)
[»] chr8 (11 HSPs)
chr8 (1-34)||(25703565-25703598)
chr8 (1-34)||(25812736-25812769)
chr8 (1-32)||(21651735-21651766)
chr8 (1-31)||(16656920-16656950)
chr8 (2-39)||(3305288-3305325)
chr8 (1-34)||(8453223-8453256)
chr8 (1-34)||(15596564-15596597)
chr8 (1-34)||(18291683-18291716)
chr8 (1-34)||(18842749-18842782)
chr8 (1-34)||(35052273-35052306)
chr8 (1-34)||(41308116-41308149)
[»] chr5 (11 HSPs)
chr5 (1-32)||(4098533-4098564)
chr5 (1-31)||(10359222-10359252)
chr5 (1-39)||(38910475-38910513)
chr5 (5-34)||(1087917-1087946)
chr5 (1-34)||(2673962-2673995)
chr5 (1-34)||(4175464-4175497)
chr5 (1-34)||(4985159-4985192)
chr5 (1-34)||(9127335-9127368)
chr5 (5-34)||(10889172-10889201)
chr5 (1-34)||(16124244-16124277)
chr5 (1-29)||(4688810-4688838)
[»] chr7 (4 HSPs)
chr7 (1-39)||(33174027-33174065)
chr7 (1-34)||(5732063-5732096)
chr7 (1-34)||(17896481-17896514)
chr7 (1-34)||(36922460-36922493)
[»] chr3 (6 HSPs)
chr3 (1-39)||(45101346-45101384)
chr3 (1-31)||(47069853-47069883)
chr3 (1-34)||(29698211-29698244)
chr3 (1-34)||(33491132-33491165)
chr3 (5-34)||(35458497-35458526)
chr3 (1-34)||(43554609-43554642)
[»] chr2 (11 HSPs)
chr2 (1-31)||(14308613-14308643)
chr2 (1-39)||(30264587-30264625)
chr2 (1-34)||(3376267-3376300)
chr2 (1-34)||(10812419-10812452)
chr2 (1-34)||(11222306-11222339)
chr2 (1-34)||(15182991-15183024)
chr2 (1-34)||(19594570-19594603)
chr2 (1-34)||(35158341-35158374)
chr2 (1-34)||(36375793-36375826)
chr2 (1-34)||(44360653-44360686)
chr2 (3-39)||(1259614-1259650)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-34)||(8374-8407)


Alignment Details
Target: chr6 (Bit Score: 390; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 47 - 490
Target Start/End: Original strand, 6911577 - 6912012
Alignment:
Q  47 tgttgatttaaaaacattttacctcaacacttggtcaaaatctgcatccttactaatactatttgaaaagttacaaaaaataaaattaaccagctacaaa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||    
T  6911577 tgttgatttaaaaacattttacctcaacacttggtcaaaatctgcatccttact------atttgaaaagttacaaaaaataaaattaaccagctacaaa 6911670  T
Q  147 ttgtaactaattgcattgaagcctaaggattcttgtctttatcaccaaaacactgtaacttaggacactttcaatacatgttaaaaccttaaattatccc 246  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6911671 ttgtaactaattgcattgaaacctaaggattcttgtctttatcaccaaaacactggaacttaggacactttcaatacatgttaaaaccttaaattatccc 6911770  T
Q  247 tggcagattactagtatgtaattgataatatctgtcaaacaactaaactgaagtcagttttggtaaccaatctctctcctagaagaaatgtacttagtga 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  6911771 tggcagattactagtatgtaattgataatatctgtcaaacaactaaactgaagtcagttttggtaaccaa--tctctcctagaggaaatgtacttagtga 6911868  T
Q  347 cctcatccttctgctcagctccataaacgaaccatttttcatcaacttcaacaacatcttcatcatggatcttcacatctgaatgttgatacgtattagt 446  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6911869 cctcatccttctgctcagctccataaacaaaccatttttcatcaacttcaacaacatcttcatcatggatcttcacatctgaatgttgatacatattagt 6911968  T
Q  447 aaacatgctagagcctaaatctcaaaggtatcattcacagaagt 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6911969 aaacatgctagagcctaaatctcaaaggtatcattcacagaagt 6912012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 34
Target Start/End: Original strand, 53853 - 53884
Alignment:
Q  3 tcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||||    
T  53853 tcaaaatgtgacaattaaaaagaaacggaggt 53884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 364561 - 364530
Alignment:
Q  3 tcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||||    
T  364561 tcaaaatgtgacaattaaaaagaaacggaggt 364530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22050268 - 22050301
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  22050268 tgtcaaaatgtgacaattaaaaaggaacggaggt 22050301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 17601153 - 17601121
Alignment:
Q  2 gtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||| |||||    
T  17601153 gtcaaaatgtgacaattaaaaagaaacagaggt 17601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 240; Significance: 1e-133; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 107 - 468
Target Start/End: Original strand, 15206 - 15571
Alignment:
Q  107 atttgaaaagttacaaaaaataaaattaaccagctacaaattgtaactaattgcattgaag-------cctaaggattcttgtctttatcaccaaaacac 199  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  15206 atttgaaaagttacgaaaattaaaattaaccagctacaaattgtaactaattgcattgaaatttgaaacctaaggattcttgtctttatcaccaaaacac 15305  T
Q  200 tgtaacttaggacactttcaatacatgttaaaaccttaaattatccctggcagattactagtatgtaattgataatatctgtcaaacaactaaactgaag 299  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||  |||    
T  15306 tggaacttaggacacttttaatacatgttaaaaccttaaattatccctt-cagattactagtatgtaattggtaatatctctcaaacaactaaacaaaag 15404  T
Q  300 tcagttttggtaaccaatctctctcctagaagaaatgtacttagtgacctcatccttctgctcagctccataaacgaaccatttttcatcaacttcaaca 399  Q
    | || ||||||||||||||||  ||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15405 ttagctttggtaaccaatctc--tcctagaggaattgtacttattgacctcatccttctgcacagctccataaacaaaccatttttcatcaacttcaaca 15502  T
Q  400 acatcttcatcatggatcttcacatctgaatgttgatacgtattagtaaacatgctagagcctaaatct 468  Q
     ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  15503 gcatcttcatcatggatcttcaaatctgtatgttgatatgtattagtaaacatgctagagcctaaatct 15571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 107 - 468
Target Start/End: Original strand, 24041 - 24406
Alignment:
Q  107 atttgaaaagttacaaaaaataaaattaaccagctacaaattgtaactaattgcattgaag-------cctaaggattcttgtctttatcaccaaaacac 199  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  24041 atttgaaaagttacgaaaattaaaattaaccagctacaaattgtaactaattgcattgaaatttgaaacctaaggattcttgtctttatcaccaaaacac 24140  T
Q  200 tgtaacttaggacactttcaatacatgttaaaaccttaaattatccctggcagattactagtatgtaattgataatatctgtcaaacaactaaactgaag 299  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||  |||    
T  24141 tggaacttaggacacttttaatacatgttaaaaccttaaattatccctt-cagattactagtatgtaattggtaatatctctcaaacaactaaacaaaag 24239  T
Q  300 tcagttttggtaaccaatctctctcctagaagaaatgtacttagtgacctcatccttctgctcagctccataaacgaaccatttttcatcaacttcaaca 399  Q
    | || ||||||||||||||||  ||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  24240 ttagctttggtaaccaatctc--tcctagaggaattgtacttattgacctcatccttctgcacagctccataaacaaaccatttttcatcaacttcaaca 24337  T
Q  400 acatcttcatcatggatcttcacatctgaatgttgatacgtattagtaaacatgctagagcctaaatct 468  Q
     ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  24338 gcatcttcatcatggatcttcaaatctgtatgttgatatgtattagtaaacatgctagagcctaaatct 24406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 295 - 490
Target Start/End: Complemental strand, 158174 - 157981
Alignment:
Q  295 tgaagtcagttttggtaaccaatctctctcctagaagaaatgtacttagtgacctcatccttctgctcagctccataaacgaaccatttttcatcaactt 394  Q
    ||||||||| ||||||||||||| ||||  ||||| |||||||||||| | ||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  158174 tgaagtcagctttggtaaccaatgtctc--ctagaggaaatgtacttattaacctcgtccttctgttcagctccataaacaaaccatttttcatcaactt 158077  T
Q  395 caacaacatcttcatcatggatcttcacatctgaatgttgatacgtattagtaaacatgctagagcctaaatctcaaaggtatcattcacagaagt 490  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||| | |||||||| ||||||||| ||| ||||    
T  158076 caacaccatcttcatcatggatcttcaaatctgtatgttgatatgtattagtaaacatgctatagcttgaatctcaatggtatcattgacaaaagt 157981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 158287 - 158214
Alignment:
Q  123 aaaataaaattaaccagctacaaattgtaactaattgcattgaagcctaaggattcttgtctttatcaccaaaa 196  Q
    |||||||||  |||||||||||||| |||||||||| ||||||| | |||||| |||||||| |||||||||||    
T  158287 aaaataaaagaaaccagctacaaatggtaactaattacattgaaacttaaggagtcttgtctctatcaccaaaa 158214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44069254 - 44069292
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  44069254 tgtcaaaatgtgacaattaaaaagaaacggaggtagtag 44069292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9834503 - 9834541
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  9834503 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 9834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 354189 - 354222
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  354189 tgtcaaaatgtgacaattaaaaaggaacggaggt 354222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5374371 - 5374338
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  5374371 tgtcaaaatatgacaattaaaaagaaacggaggt 5374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19093174 - 19093141
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  19093174 tgtcaaaatgtgacaattaaaaaggaacggaggt 19093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22828422 - 22828389
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  22828422 tgtcaaaatgtgacaattaaaaaggaacggaggt 22828389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35231913 - 35231946
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  35231913 tgtcaaaatgtgacaattaaaaaggaacggaggt 35231946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44013934 - 44013901
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  44013934 tgtcaaaatgtgacaattaaaaaggaacggaggt 44013901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44217929 - 44217962
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  44217929 tgtcaaaatgtgacaattaaaaaggaacggaggt 44217962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 47251640 - 47251669
Alignment:
Q  5 aaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||    
T  47251640 aaaatgtgacaattaaaaagaaacggaggt 47251669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 38009786 - 38009754
Alignment:
Q  2 gtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||| |||||||||    
T  38009786 gtcaaaatgtgacaattaaaaaggaacggaggt 38009754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 56576124 - 56576092
Alignment:
Q  2 gtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||| |||||||||    
T  56576124 gtcaaaatgtgacaattaaaaaggaacggaggt 56576092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38648677 - 38648715
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  38648677 tgtcaaaatgtgacaattaaaaagaaacggaggtagtag 38648715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 48264792 - 48264760
Alignment:
Q  2 gtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||||||||||||    
T  48264792 gtcaaaatgtgacaattaaaaagaaacggaggt 48264760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12231088 - 12231050
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  12231088 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 12231050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43500726 - 43500764
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  43500726 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 43500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13566899 - 13566932
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  13566899 tgtcaaaatgtgacaattaaaaaggaacggaggt 13566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29830973 - 29831006
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  29830973 tgtcaaaatgtgacaattaaaaaggaacggaggt 29831006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31487796 - 31487763
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  31487796 tgtcaaaatgtgacaattaaaaaggaacggaggt 31487763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35531312 - 35531279
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  35531312 tgtcaaaatgtgacaattaaaaaggaacggaggt 35531279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 48508353 - 48508382
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacgg 30  Q
    ||||||||||||||||||||||||||||||    
T  48508353 tgtcaaaatgtgacaattaaaaagaaacgg 48508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52649746 - 52649709
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggta 38  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  52649746 tgtcaaaaagtgacaattaaaaaggaacggaggtggta 52649709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25703598 - 25703565
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25703598 tgtcaaaatgtgacaattaaaaagaaacggaggt 25703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25812769 - 25812736
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25812769 tgtcaaaatgtgacaattaaaaagaaacggaggt 25812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21651766 - 21651735
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggag 32  Q
    ||||||||||||||||||||||||||||||||    
T  21651766 tgtcaaaatgtgacaattaaaaagaaacggag 21651735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 16656920 - 16656950
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  16656920 tgtcaaaatgtgacaattaaaaagaaacgga 16656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 3305325 - 3305288
Alignment:
Q  2 gtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  3305325 gtcaaaatgtgacaattgaaaagaaacggagggggtag 3305288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8453256 - 8453223
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  8453256 tgtcaaaatgtgacaattaaaaaggaacggaggt 8453223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15596564 - 15596597
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  15596564 tgtcaaaatgtgacaattaaaaaggaacggaggt 15596597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18291683 - 18291716
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  18291683 tgtcaaaatgtgacaattaaaaaggaacggaggt 18291716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18842749 - 18842782
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  18842749 tgtcaaaatgtgacaattaaaaaggaacggaggt 18842782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35052273 - 35052306
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  35052273 tgtcaaaatgtgacaattaaaaaggaacggaggt 35052306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41308116 - 41308149
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  41308116 tgtcaaaatatgacaattaaaaagaaacggaggt 41308149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4098533 - 4098564
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggag 32  Q
    ||||||||||||||||||||||||||||||||    
T  4098533 tgtcaaaatgtgacaattaaaaagaaacggag 4098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10359252 - 10359222
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  10359252 tgtcaaaatgtgacaattaaaaagaaacgga 10359222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38910475 - 38910513
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  38910475 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 38910513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 1087946 - 1087917
Alignment:
Q  5 aaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||    
T  1087946 aaaatgtgacaattaaaaagaaacggaggt 1087917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2673995 - 2673962
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  2673995 tgtcaaaatgtgacaattaaaaaggaacggaggt 2673962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4175497 - 4175464
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  4175497 tgtcaaaatgtgacaattaaaaaggaacggaggt 4175464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4985192 - 4985159
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  4985192 tgtcaaaatgtgacaattaaaaaggaacggaggt 4985159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9127368 - 9127335
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  9127368 tgtcaaaatgtgacaattaaaaaggaacggaggt 9127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 10889201 - 10889172
Alignment:
Q  5 aaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||    
T  10889201 aaaatgtgacaattaaaaagaaacggaggt 10889172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16124277 - 16124244
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  16124277 tgtcaaaatgtgacaattaaaaaggaacggaggt 16124244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 4688838 - 4688810
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacg 29  Q
    |||||||||||||||||||||||||||||    
T  4688838 tgtcaaaatgtgacaattaaaaagaaacg 4688810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33174027 - 33174065
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  33174027 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 33174065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5732096 - 5732063
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5732096 tgtcaaaatgtgacaattaaaaaggaacggaggt 5732063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17896514 - 17896481
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  17896514 tgtcaaaatgtgacaattaaaaaggaacggaggt 17896481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36922460 - 36922493
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  36922460 tgtcaaaatgtgacaattaaaaaggaacggaggt 36922493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000005; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45101384 - 45101346
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  45101384 tgtcaaaatgtgacaattaaaaaggaacggaggtagtag 45101346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 47069883 - 47069853
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  47069883 tgtcaaaatgtgacaattaaaaagaaacgga 47069853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29698211 - 29698244
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  29698211 tgtcaaaatgtgacaattaaaaaggaacggaggt 29698244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33491165 - 33491132
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  33491165 tgtcaaaatgtgacaattaaaaaggaacggaggt 33491132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 35458526 - 35458497
Alignment:
Q  5 aaaatgtgacaattaaaaagaaacggaggt 34  Q
    ||||||||||||||||||||||||||||||    
T  35458526 aaaatgtgacaattaaaaagaaacggaggt 35458497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43554609 - 43554642
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  43554609 tgtcaaaatgtgacaattaaaaagtaacggaggt 43554642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 14308613 - 14308643
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacgga 31  Q
    |||||||||||||||||||||||||||||||    
T  14308613 tgtcaaaatgtgacaattaaaaagaaacgga 14308643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30264625 - 30264587
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  30264625 tgtcaaaatgtgacaattaaaaaggaacggaggaggtag 30264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3376300 - 3376267
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  3376300 tgtcaaaatgtgacaattaaaaaggaacggaggt 3376267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10812419 - 10812452
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  10812419 tgtcaaaatgtgacaattaaaaaggaacggaggt 10812452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11222339 - 11222306
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  11222339 tgtcaaaatgtgacaattaaaaaggaacggaggt 11222306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15183024 - 15182991
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  15183024 tgtcaaaatgtgacaattaaaaaggaacggaggt 15182991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19594570 - 19594603
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  19594570 tgtcaaaatgtgacaattaaaaagtaacggaggt 19594603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35158374 - 35158341
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||| |||||||||||||||||||||||||    
T  35158374 tgtcaaaaagtgacaattaaaaagaaacggaggt 35158341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36375793 - 36375826
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  36375793 tgtcaaaatgtgacaattaaaaaggaacggaggt 36375826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44360653 - 44360686
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  44360653 tgtcaaaatgtgacaattaaaaaggaacggaggt 44360686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 1259650 - 1259614
Alignment:
Q  3 tcaaaatgtgacaattaaaaagaaacggaggtggtag 39  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  1259650 tcaaaatgtaacaattaaaaagaaacggaggtagtag 1259614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8374 - 8407
Alignment:
Q  1 tgtcaaaatgtgacaattaaaaagaaacggaggt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  8374 tgtcaaaatgtgacaattaaaaaggaacggaggt 8407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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