View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0683_low_12 (Length: 464)

Name: NF0683_low_12
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0683_low_12
NF0683_low_12
[»] chr4 (77 HSPs)
chr4 (9-442)||(39194044-39194473)
chr4 (9-118)||(51736974-51737083)
chr4 (9-118)||(35064109-35064217)
chr4 (17-104)||(25644499-25644586)
chr4 (9-118)||(18359993-18360102)
chr4 (9-118)||(36602826-36602935)
chr4 (14-118)||(50033157-50033261)
chr4 (9-116)||(3901161-3901268)
chr4 (19-102)||(6922976-6923059)
chr4 (9-104)||(28166406-28166501)
chr4 (9-104)||(46803764-46803859)
chr4 (9-118)||(19652276-19652385)
chr4 (8-104)||(20678622-20678718)
chr4 (9-104)||(3442378-3442473)
chr4 (125-228)||(3982728-3982831)
chr4 (17-104)||(19525748-19525835)
chr4 (9-104)||(26205738-26205833)
chr4 (119-228)||(10981948-10982057)
chr4 (22-118)||(50035681-50035777)
chr4 (9-104)||(4264266-4264361)
chr4 (9-104)||(5735403-5735498)
chr4 (9-104)||(7738853-7738948)
chr4 (9-104)||(19170573-19170668)
chr4 (9-104)||(28152123-28152218)
chr4 (9-116)||(37688055-37688162)
chr4 (9-104)||(45198374-45198469)
chr4 (9-104)||(47579418-47579513)
chr4 (9-104)||(49768577-49768672)
chr4 (24-93)||(18881306-18881375)
chr4 (9-118)||(39260152-39260261)
chr4 (22-118)||(4209504-4209600)
chr4 (9-104)||(3443421-3443516)
chr4 (14-116)||(19631445-19631548)
chr4 (9-104)||(46212384-46212479)
chr4 (8-118)||(23603667-23603777)
chr4 (12-110)||(47278305-47278403)
chr4 (9-118)||(19633869-19633978)
chr4 (9-114)||(39195514-39195619)
chr4 (9-117)||(23256067-23256175)
chr4 (125-217)||(40978980-40979072)
chr4 (22-118)||(55997256-55997352)
chr4 (9-104)||(1377164-1377258)
chr4 (9-104)||(5744117-5744212)
chr4 (9-116)||(21858941-21859048)
chr4 (9-116)||(21914804-21914911)
chr4 (9-91)||(1613152-1613234)
chr4 (16-118)||(5123177-5123279)
chr4 (9-104)||(6494720-6494817)
chr4 (24-102)||(37164052-37164130)
chr4 (125-215)||(47253367-47253457)
chr4 (8-118)||(53987713-53987823)
chr4 (15-116)||(10181126-10181226)
chr4 (14-83)||(14958136-14958205)
chr4 (9-66)||(50971591-50971648)
chr4 (125-176)||(19809791-19809842)
chr4 (44-118)||(48336648-48336722)
chr4 (9-118)||(27982568-27982677)
chr4 (9-118)||(42185294-42185403)
chr4 (9-53)||(42187064-42187108)
chr4 (139-229)||(2674471-2674561)
chr4 (19-118)||(29844268-29844367)
chr4 (9-80)||(31152719-31152790)
chr4 (9-104)||(39786391-39786486)
chr4 (9-80)||(43047445-43047516)
chr4 (9-80)||(43447223-43447294)
chr4 (14-80)||(4271953-4272019)
chr4 (9-79)||(24505570-24505640)
chr4 (42-104)||(55190600-55190662)
chr4 (9-110)||(27976598-27976699)
chr4 (9-98)||(28914408-28914497)
chr4 (435-464)||(39194496-39194525)
chr4 (42-98)||(10304972-10305028)
chr4 (8-96)||(37667707-37667795)
chr4 (15-91)||(39260399-39260475)
chr4 (24-80)||(47834093-47834149)
chr4 (14-118)||(50684940-50685044)
chr4 (22-102)||(55291108-55291188)
[»] chr1 (60 HSPs)
chr1 (14-118)||(38737398-38737502)
chr1 (17-104)||(16265173-16265260)
chr1 (17-104)||(16266302-16266389)
chr1 (9-118)||(21034549-21034658)
chr1 (17-104)||(3898605-3898692)
chr1 (17-104)||(24982491-24982578)
chr1 (9-104)||(25531910-25532005)
chr1 (9-110)||(3529308-3529409)
chr1 (9-118)||(37281224-37281333)
chr1 (9-104)||(42708632-42708727)
chr1 (17-104)||(43680210-43680297)
chr1 (9-104)||(50876496-50876591)
chr1 (22-104)||(26441779-26441861)
chr1 (14-114)||(29161980-29162080)
chr1 (9-104)||(30529084-30529179)
chr1 (9-104)||(52379121-52379216)
chr1 (14-104)||(23569708-23569798)
chr1 (14-111)||(50481413-50481510)
chr1 (14-118)||(4605136-4605240)
chr1 (9-93)||(39354309-39354393)
chr1 (9-104)||(38458862-38458957)
chr1 (9-104)||(50539392-50539487)
chr1 (14-104)||(48264845-48264935)
chr1 (23-116)||(47222361-47222454)
chr1 (15-104)||(48219676-48219765)
chr1 (9-104)||(16751487-16751582)
chr1 (9-104)||(32988383-32988478)
chr1 (9-104)||(49805286-49805381)
chr1 (14-110)||(48376285-48376378)
chr1 (9-104)||(1849832-1849928)
chr1 (9-93)||(27990760-27990844)
chr1 (22-118)||(32968133-32968229)
chr1 (9-104)||(14075866-14075960)
chr1 (15-101)||(23330590-23330677)
chr1 (126-176)||(8019039-8019089)
chr1 (125-170)||(2140904-2140949)
chr1 (11-116)||(26543890-26543995)
chr1 (9-110)||(31971415-31971516)
chr1 (9-80)||(6017388-6017459)
chr1 (9-80)||(7075269-7075340)
chr1 (9-80)||(10100452-10100523)
chr1 (15-118)||(49903630-49903733)
chr1 (9-79)||(5117373-5117443)
chr1 (129-215)||(5459620-5459706)
chr1 (9-75)||(32565878-32565944)
chr1 (9-80)||(40058906-40058979)
chr1 (8-93)||(51924908-51924994)
chr1 (9-80)||(52688587-52688660)
chr1 (14-118)||(3277623-3277728)
chr1 (25-118)||(31932133-31932226)
chr1 (9-118)||(41501627-41501736)
chr1 (14-118)||(2612019-2612123)
chr1 (9-69)||(5606330-5606390)
chr1 (9-69)||(5945834-5945894)
chr1 (9-81)||(23391391-23391463)
chr1 (125-217)||(34273177-34273268)
chr1 (14-118)||(38786890-38786994)
chr1 (9-69)||(44741412-44741472)
chr1 (9-69)||(50295875-50295935)
chr1 (9-69)||(52749350-52749410)
[»] chr5 (61 HSPs)
chr5 (9-104)||(22613743-22613838)
chr5 (17-104)||(16048225-16048312)
chr5 (9-104)||(37516277-37516372)
chr5 (17-104)||(39405904-39405991)
chr5 (17-104)||(4299867-4299954)
chr5 (9-118)||(37843595-37843704)
chr5 (9-118)||(39036542-39036651)
chr5 (9-110)||(41411185-41411286)
chr5 (17-104)||(970278-970365)
chr5 (9-104)||(23988709-23988804)
chr5 (9-104)||(40512714-40512809)
chr5 (9-104)||(42148439-42148534)
chr5 (125-215)||(8939001-8939091)
chr5 (9-110)||(1830787-1830888)
chr5 (9-102)||(2864086-2864179)
chr5 (17-118)||(14475250-14475351)
chr5 (15-104)||(30779780-30779869)
chr5 (9-118)||(35290418-35290527)
chr5 (9-104)||(5212956-5213051)
chr5 (9-100)||(19868724-19868815)
chr5 (9-104)||(29627400-29627495)
chr5 (9-104)||(39894913-39895008)
chr5 (25-111)||(19087643-19087729)
chr5 (125-215)||(27083149-27083239)
chr5 (9-118)||(4924858-4924967)
chr5 (15-104)||(32002048-32002137)
chr5 (9-110)||(40316254-40316355)
chr5 (125-228)||(29278935-29279038)
chr5 (9-104)||(38698095-38698190)
chr5 (125-217)||(20025373-20025465)
chr5 (19-118)||(25563642-25563741)
chr5 (9-104)||(35448031-35448126)
chr5 (9-104)||(43517094-43517189)
chr5 (9-77)||(5985000-5985068)
chr5 (21-77)||(24520349-24520405)
chr5 (9-88)||(27477673-27477752)
chr5 (9-104)||(32334672-32334767)
chr5 (9-104)||(5364552-5364651)
chr5 (126-215)||(26994517-26994606)
chr5 (42-104)||(43067386-43067448)
chr5 (184-229)||(19990968-19991013)
chr5 (20-85)||(28142981-28143046)
chr5 (9-80)||(1098233-1098304)
chr5 (9-116)||(9936823-9936930)
chr5 (9-80)||(13548271-13548342)
chr5 (9-80)||(20022918-20022989)
chr5 (9-80)||(20040350-20040421)
chr5 (9-80)||(30211676-30211747)
chr5 (9-96)||(31191112-31191199)
chr5 (9-96)||(40316860-40316947)
chr5 (9-80)||(41263064-41263135)
chr5 (9-96)||(41410594-41410681)
chr5 (127-173)||(7449883-7449929)
chr5 (9-95)||(21961359-21961445)
chr5 (15-81)||(35641826-35641892)
chr5 (8-96)||(2805839-2805928)
chr5 (9-66)||(19889785-19889842)
chr5 (9-118)||(34169849-34169958)
chr5 (24-80)||(1781095-1781151)
chr5 (9-69)||(19344634-19344694)
chr5 (127-201)||(24546433-24546509)
[»] chr3 (71 HSPs)
chr3 (9-118)||(36665150-36665259)
chr3 (17-116)||(32951158-32951257)
chr3 (9-116)||(37833032-37833139)
chr3 (17-104)||(17053004-17053091)
chr3 (9-118)||(5030009-5030119)
chr3 (8-102)||(51062521-51062615)
chr3 (9-110)||(35717883-35717984)
chr3 (9-104)||(7459854-7459949)
chr3 (9-116)||(29728120-29728227)
chr3 (9-104)||(43137983-43138078)
chr3 (9-118)||(48690185-48690294)
chr3 (8-104)||(52668520-52668616)
chr3 (9-104)||(1327444-1327539)
chr3 (9-104)||(8559039-8559134)
chr3 (9-104)||(18659184-18659279)
chr3 (9-104)||(21907128-21907223)
chr3 (9-104)||(38492183-38492278)
chr3 (9-104)||(38833795-38833890)
chr3 (9-104)||(54840162-54840257)
chr3 (14-116)||(48143900-48144002)
chr3 (9-118)||(7671333-7671442)
chr3 (9-118)||(15503155-15503264)
chr3 (15-104)||(32285210-32285299)
chr3 (9-104)||(10571178-10571273)
chr3 (9-118)||(3547440-3547550)
chr3 (14-118)||(49057993-49058097)
chr3 (9-104)||(25097221-25097316)
chr3 (9-104)||(45167431-45167526)
chr3 (12-83)||(3086276-3086347)
chr3 (9-96)||(36179066-36179153)
chr3 (9-116)||(54673910-54674017)
chr3 (42-104)||(4238528-4238590)
chr3 (9-118)||(46483682-46483789)
chr3 (9-118)||(10819373-10819482)
chr3 (9-118)||(47638187-47638296)
chr3 (8-118)||(53066505-53066611)
chr3 (142-201)||(1770933-1770993)
chr3 (10-93)||(8440511-8440595)
chr3 (17-69)||(10435274-10435326)
chr3 (22-118)||(18971494-18971590)
chr3 (14-118)||(28958934-28959038)
chr3 (9-93)||(39099008-39099092)
chr3 (9-69)||(46866412-46866472)
chr3 (8-80)||(48927731-48927803)
chr3 (24-96)||(50673719-50673791)
chr3 (9-80)||(9484654-9484725)
chr3 (9-80)||(12948098-12948169)
chr3 (26-81)||(23631539-23631594)
chr3 (9-52)||(27849083-27849126)
chr3 (9-80)||(29455638-29455709)
chr3 (9-80)||(29793308-29793379)
chr3 (9-80)||(34263634-34263705)
chr3 (9-80)||(34555209-34555280)
chr3 (9-80)||(49076356-49076427)
chr3 (14-69)||(53274930-53274985)
chr3 (19-93)||(21271897-21271971)
chr3 (125-174)||(30429852-30429902)
chr3 (14-80)||(42098562-42098628)
chr3 (42-80)||(47069464-47069502)
chr3 (20-90)||(54684609-54684679)
chr3 (9-97)||(45093853-45093939)
chr3 (33-118)||(46818343-46818428)
chr3 (33-118)||(50888365-50888450)
chr3 (9-69)||(901018-901078)
chr3 (42-118)||(1778191-1778267)
chr3 (14-93)||(8437157-8437237)
chr3 (24-96)||(18013415-18013487)
chr3 (9-109)||(33462734-33462834)
chr3 (9-69)||(34669677-34669737)
chr3 (9-69)||(47340014-47340074)
chr3 (9-69)||(52094024-52094084)
[»] chr7 (61 HSPs)
chr7 (17-104)||(37231597-37231684)
chr7 (9-110)||(18795168-18795269)
chr7 (9-118)||(44389306-44389415)
chr7 (9-118)||(48531454-48531563)
chr7 (17-104)||(35500781-35500868)
chr7 (9-104)||(36819828-36819923)
chr7 (9-104)||(47713536-47713631)
chr7 (9-104)||(2400417-2400512)
chr7 (17-104)||(10464149-10464236)
chr7 (9-104)||(36859242-36859337)
chr7 (9-104)||(44479755-44479850)
chr7 (9-104)||(47081112-47081207)
chr7 (9-115)||(46657765-46657871)
chr7 (9-104)||(21392150-21392245)
chr7 (9-104)||(31466392-31466487)
chr7 (15-110)||(31497737-31497827)
chr7 (9-104)||(32618976-32619071)
chr7 (17-104)||(36643302-36643389)
chr7 (9-104)||(36905658-36905753)
chr7 (9-104)||(42834326-42834421)
chr7 (14-104)||(31110762-31110852)
chr7 (9-118)||(47538055-47538164)
chr7 (9-93)||(42086683-42086767)
chr7 (8-95)||(4088770-4088857)
chr7 (9-104)||(4612121-4612216)
chr7 (14-104)||(23474003-23474093)
chr7 (22-104)||(28185445-28185527)
chr7 (9-104)||(19072901-19072996)
chr7 (9-104)||(37950979-37951074)
chr7 (22-116)||(33613358-33613451)
chr7 (19-104)||(34478042-34478130)
chr7 (9-69)||(38198613-38198673)
chr7 (9-92)||(42493563-42493646)
chr7 (9-79)||(35265756-35265826)
chr7 (9-102)||(7460991-7461084)
chr7 (9-66)||(29770546-29770603)
chr7 (9-98)||(31496580-31496669)
chr7 (9-118)||(38353533-38353642)
chr7 (42-118)||(7314313-7314389)
chr7 (125-229)||(16203812-16203916)
chr7 (20-80)||(28016173-28016233)
chr7 (8-96)||(30462155-30462243)
chr7 (9-69)||(38498749-38498809)
chr7 (9-80)||(9173271-9173342)
chr7 (186-229)||(16204442-16204485)
chr7 (9-80)||(16807081-16807152)
chr7 (9-80)||(38069109-38069180)
chr7 (21-96)||(39982159-39982234)
chr7 (9-114)||(2450817-2450923)
chr7 (9-79)||(3124081-3124151)
chr7 (127-169)||(12004737-12004779)
chr7 (14-96)||(23348398-23348480)
chr7 (9-118)||(23734189-23734299)
chr7 (9-83)||(14201509-14201585)
chr7 (15-80)||(26651150-26651215)
chr7 (8-110)||(46074380-46074484)
chr7 (128-168)||(2226735-2226775)
chr7 (22-102)||(9821231-9821311)
chr7 (22-102)||(10723156-10723236)
chr7 (14-70)||(26190305-26190361)
chr7 (22-118)||(40348552-40348648)
[»] chr8 (63 HSPs)
chr8 (9-118)||(20167597-20167706)
chr8 (14-118)||(10658114-10658218)
chr8 (17-104)||(18809416-18809503)
chr8 (9-104)||(43066258-43066353)
chr8 (9-111)||(886096-886198)
chr8 (9-104)||(23248984-23249079)
chr8 (9-104)||(29791074-29791169)
chr8 (9-104)||(30290056-30290151)
chr8 (9-104)||(30380662-30380757)
chr8 (17-104)||(31127839-31127926)
chr8 (9-102)||(13138168-13138261)
chr8 (125-229)||(13754848-13754952)
chr8 (14-118)||(14522517-14522620)
chr8 (22-118)||(44123815-44123911)
chr8 (9-104)||(3293135-3293230)
chr8 (9-118)||(6470977-6471086)
chr8 (10-118)||(3383542-3383649)
chr8 (22-118)||(45253891-45253987)
chr8 (9-104)||(1580799-1580894)
chr8 (9-92)||(2805522-2805605)
chr8 (9-104)||(8350914-8351009)
chr8 (14-93)||(25256470-25256549)
chr8 (9-104)||(38845739-38845834)
chr8 (9-104)||(45081944-45082039)
chr8 (14-104)||(37710036-37710126)
chr8 (9-118)||(6470634-6470743)
chr8 (9-118)||(25173689-25173798)
chr8 (9-104)||(2986457-2986552)
chr8 (127-229)||(13765081-13765183)
chr8 (19-93)||(13888572-13888646)
chr8 (23-116)||(12893674-12893767)
chr8 (14-118)||(1156515-1156619)
chr8 (8-88)||(11854656-11854736)
chr8 (14-102)||(14847346-14847434)
chr8 (9-104)||(38739789-38739884)
chr8 (9-104)||(39361257-39361352)
chr8 (9-104)||(40013783-40013878)
chr8 (127-177)||(8844662-8844712)
chr8 (9-67)||(25118857-25118915)
chr8 (9-110)||(7431251-7431352)
chr8 (9-118)||(23764469-23764578)
chr8 (9-102)||(27301898-27301991)
chr8 (24-96)||(25009186-25009258)
chr8 (9-69)||(42786030-42786090)
chr8 (43-118)||(11988731-11988806)
chr8 (9-96)||(21132860-21132947)
chr8 (9-52)||(23248909-23248952)
chr8 (9-96)||(23437745-23437832)
chr8 (9-80)||(30464490-30464561)
chr8 (9-91)||(761597-761679)
chr8 (8-118)||(4960171-4960281)
chr8 (14-80)||(14378623-14378689)
chr8 (15-80)||(20671314-20671379)
chr8 (15-80)||(25691535-25691600)
chr8 (15-76)||(26627964-26628025)
chr8 (129-201)||(26916822-26916895)
chr8 (15-80)||(30653418-30653483)
chr8 (8-93)||(35584105-35584190)
chr8 (8-80)||(1645337-1645409)
chr8 (24-80)||(3466341-3466397)
chr8 (9-69)||(5777486-5777546)
chr8 (42-118)||(29360901-29360977)
chr8 (9-77)||(38036790-38036858)
[»] chr6 (46 HSPs)
chr6 (9-118)||(13206973-13207082)
chr6 (9-104)||(20662093-20662188)
chr6 (17-104)||(25163304-25163391)
chr6 (9-116)||(33121674-33121781)
chr6 (125-228)||(34572892-34572995)
chr6 (16-118)||(16696036-16696138)
chr6 (26-118)||(31708913-31709005)
chr6 (9-104)||(8796181-8796276)
chr6 (9-104)||(18992035-18992130)
chr6 (9-104)||(24150873-24150968)
chr6 (9-104)||(30237299-30237394)
chr6 (9-83)||(29986213-29986287)
chr6 (15-118)||(19068791-19068894)
chr6 (9-104)||(25435543-25435638)
chr6 (14-118)||(4890070-4890174)
chr6 (9-104)||(643465-643560)
chr6 (9-104)||(7097907-7098002)
chr6 (9-104)||(11114697-11114792)
chr6 (9-104)||(22020408-22020503)
chr6 (9-83)||(24693193-24693267)
chr6 (9-102)||(32541416-32541509)
chr6 (9-69)||(19788647-19788707)
chr6 (125-173)||(22692182-22692230)
chr6 (9-80)||(995621-995692)
chr6 (9-96)||(2397812-2397899)
chr6 (9-80)||(2656609-2656680)
chr6 (9-80)||(2667264-2667335)
chr6 (139-229)||(11087606-11087696)
chr6 (9-104)||(31854950-31855045)
chr6 (9-102)||(9022876-9022969)
chr6 (139-228)||(34187398-34187487)
chr6 (186-229)||(14268582-14268625)
chr6 (9-96)||(16969420-16969507)
chr6 (9-80)||(24825223-24825294)
chr6 (9-80)||(30699319-30699390)
chr6 (24-118)||(10109365-10109459)
chr6 (14-80)||(24798490-24798556)
chr6 (9-98)||(2141608-2141697)
chr6 (15-80)||(16661547-16661612)
chr6 (9-102)||(17179337-17179428)
chr6 (9-69)||(6142446-6142506)
chr6 (126-170)||(15104236-15104280)
chr6 (128-156)||(15480311-15480339)
chr6 (9-81)||(16434600-16434672)
chr6 (9-69)||(19762340-19762400)
chr6 (9-69)||(29514965-29515025)
[»] chr2 (55 HSPs)
chr2 (9-104)||(20517550-20517645)
chr2 (9-104)||(39418054-39418149)
chr2 (9-119)||(4083339-4083449)
chr2 (125-215)||(45258063-45258153)
chr2 (14-111)||(43925101-43925198)
chr2 (22-118)||(332419-332515)
chr2 (9-104)||(3987266-3987361)
chr2 (9-116)||(7442913-7443020)
chr2 (9-104)||(30708860-30708955)
chr2 (9-104)||(36198985-36199080)
chr2 (9-104)||(44283313-44283408)
chr2 (9-118)||(9877103-9877212)
chr2 (9-118)||(13399125-13399234)
chr2 (9-118)||(18733945-18734054)
chr2 (14-102)||(1110429-1110517)
chr2 (14-118)||(24282980-24283084)
chr2 (9-104)||(18718371-18718466)
chr2 (15-90)||(38137579-38137654)
chr2 (17-104)||(40598269-40598356)
chr2 (9-104)||(42038655-42038750)
chr2 (127-215)||(45715087-45715175)
chr2 (9-104)||(14372209-14372304)
chr2 (9-104)||(14707569-14707663)
chr2 (9-104)||(23671508-23671603)
chr2 (9-104)||(40425283-40425378)
chr2 (9-116)||(41172779-41172886)
chr2 (9-116)||(41463539-41463646)
chr2 (9-111)||(42020230-42020333)
chr2 (14-120)||(7106415-7106521)
chr2 (9-80)||(12209047-12209118)
chr2 (9-104)||(16941845-16941940)
chr2 (9-104)||(17012510-17012605)
chr2 (9-104)||(27559707-27559802)
chr2 (9-104)||(34827044-34827139)
chr2 (9-104)||(44330516-44330611)
chr2 (9-118)||(38963651-38963760)
chr2 (9-66)||(4045982-4046040)
chr2 (22-104)||(32775937-32776019)
chr2 (9-118)||(25762214-25762323)
chr2 (9-109)||(4045262-4045362)
chr2 (9-93)||(43409417-43409501)
chr2 (9-80)||(7724545-7724616)
chr2 (9-80)||(8373492-8373563)
chr2 (9-80)||(38963853-38963924)
chr2 (9-80)||(41436890-41436961)
chr2 (9-91)||(27668005-27668087)
chr2 (15-80)||(2831765-2831830)
chr2 (9-118)||(15177389-15177498)
chr2 (126-175)||(17626990-17627039)
chr2 (126-175)||(17658050-17658099)
chr2 (126-175)||(17672062-17672111)
chr2 (9-118)||(25766464-25766573)
chr2 (9-69)||(4137478-4137538)
chr2 (9-69)||(10333512-10333572)
chr2 (9-69)||(45036432-45036492)
[»] scaffold0459 (1 HSPs)
scaffold0459 (9-104)||(12884-12979)
[»] scaffold0366 (2 HSPs)
scaffold0366 (9-104)||(10525-10620)
scaffold0366 (9-104)||(14191-14286)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-104)||(44142-44237)
[»] scaffold0027 (1 HSPs)
scaffold0027 (9-93)||(117453-117537)
[»] scaffold0604 (1 HSPs)
scaffold0604 (16-80)||(1253-1317)
[»] scaffold0007 (1 HSPs)
scaffold0007 (9-104)||(15250-15345)
[»] scaffold0051 (1 HSPs)
scaffold0051 (14-104)||(41251-41341)
[»] scaffold0340 (1 HSPs)
scaffold0340 (46-118)||(14507-14579)
[»] scaffold0204 (1 HSPs)
scaffold0204 (44-118)||(24170-24244)
[»] scaffold0034 (1 HSPs)
scaffold0034 (129-171)||(18426-18468)
[»] scaffold0074 (1 HSPs)
scaffold0074 (9-69)||(45196-45256)
[»] scaffold0221 (1 HSPs)
scaffold0221 (9-80)||(5434-5505)
[»] scaffold0001 (1 HSPs)
scaffold0001 (9-80)||(184024-184095)
[»] scaffold0360 (1 HSPs)
scaffold0360 (125-229)||(14012-14116)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-69)||(145638-145696)
[»] scaffold0111 (1 HSPs)
scaffold0111 (58-118)||(38252-38312)


Alignment Details
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 9 - 442
Target Start/End: Original strand, 39194044 - 39194473
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  39194044 gagacgaatccaacaacatcttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaa 39194143  T
Q  109 tagatcatcttacattagggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggtta 208  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  39194144 taggtcatcttacattagggtgaaactaagtcacccttatataggtgcacgtgagaataaccgtctccgaaatatgtggcgtgtgattagggagcggtta 39194243  T
Q  209 gaggacatgggtatggtgatcattgcacaaaagcgtactcaaatgtgatgtgatgcattgtttgttattgacgtgttcttccaagtgttgtgccttagtg 308  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||| | ||||    |||||||||||||||||||||||||||| ||||||||||    
T  39194244 gaggacacgggtatggtgatcgttgcacaaaagtgtactcaaatgtgatgcggtgca----ttgttattgacgtgttcttccaagtgttctgccttagtg 39194339  T
Q  309 tggtagacatttagttcacgtgtcgctatggaattgaccttctaatcagtccataataaagcttaacannnnnnncgcttaaaatgactttctttttggt 408  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| | || |||||||||||       |||||||||||||||||||| ||||    
T  39194340 tggtagacatttagttcacgtgtcgctatgaaattgaccttctaatcggtctagaacaaagcttaacatttttttcgcttaaaatgactttctttgtggt 39194439  T
Q  409 ataccaacttagacattatttttcatcaacatat 442  Q
    ||||||||||||||||||||||||||||||||||    
T  39194440 ataccaacttagacattatttttcatcaacatat 39194473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 51737083 - 51736974
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||| |||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||| ||||||||||||||| |||||||||| |||    
T  51737083 gagacgaattcaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaaa 51736984  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  51736983 tagatcatct 51736974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 35064109 - 35064217
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||| |||||| |||||| |||||||| |||    
T  35064109 gagacgaatcaaacaacatcttacatgataatgtttatatttgtatattagta-aaaaatacagtcaaagtatgttaagttaatattatatattgtcaaa 35064207  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  35064208 taggtcatct 35064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 25644499 - 25644586
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  25644499 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 25644586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 18360102 - 18359993
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||||||||||| | ||||||||| | ||||||||| |||||||||| ||     
T  18360102 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaac 18360003  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  18360002 taggtcatct 18359993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 36602826 - 36602935
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||||||||||| | ||||||||| | ||||||||| |||||||||| ||     
T  36602826 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaac 36602925  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  36602926 taggtcatct 36602935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 50033157 - 50033261
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| ||||||||||| ||||||| || |||||| |    
T  50033157 gaatctaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggt 50033256  T
Q  114 catct 118  Q
    |||||    
T  50033257 catct 50033261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 3901268 - 3901161
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || ||||||| ||     
T  3901268 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaac 3901169  T
Q  109 tagatcat 116  Q
    ||||||||    
T  3901168 tagatcat 3901161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 6923059 - 6922976
Alignment:
Q  19 caacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||    
T  6923059 caacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatatt 6922976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 28166406 - 28166501
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| || |||||||    
T  28166406 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgt 28166501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 46803764 - 46803859
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| || |||||||    
T  46803764 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgt 46803859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 19652385 - 19652276
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||| |||||||||||||||||||| | ||| ||||| || || |||||||||||| ||||||||||| | ||||||||| |||||||||| ||     
T  19652385 gagacgaattcaacaacatcttacatgatattatttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaac 19652286  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  19652285 tagatcatct 19652276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 20678718 - 20678622
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  20678718 tgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 20678622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 3442473 - 3442378
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  3442473 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 3442378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 3982728 - 3982831
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatgg 224  Q
    |||||||||||||||||||||| |||||| | | ||| ||||||||| |||||| |||||| |||||||||||||||| | |||||||||  | ||||||    
T  3982728 agggtgaagctaagtcacccttctataggcgtgtgtgggaataaccgcctccaagatatgcagcgtgtgattagggagtgattagaggacgcgtgtatgg 3982827  T
Q  225 tgat 228  Q
    ||||    
T  3982828 tgat 3982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 19525835 - 19525748
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| ||||||||||  ||||||||||    
T  19525835 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgt 19525748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 26205833 - 26205738
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  26205833 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 26205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 10981948 - 10982057
Alignment:
Q  119 tacattagggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgg 218  Q
    |||||| ||| ||| |||||||||||||||||||  | | ||||||||||||| ||||   ||||||||| ||||||||||||||||||||||||||       
T  10981948 tacattggggagaaactaagtcacccttatatagacgtgtgtgagaataaccgcctccgggatatgcggcttgtgattagggagcggttagaggacacat 10982047  T
Q  219 gtatggtgat 228  Q
    ||||||||||    
T  10982048 gtatggtgat 10982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 50035681 - 50035777
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||  || ||||||| ||||||||| | |||||||||| |||||| ||||||    
T  50035681 caacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatct 50035777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 4264266 - 4264361
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  4264266 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 4264361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 5735403 - 5735498
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  5735403 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 5735498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 7738948 - 7738853
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  7738948 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 7738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 19170668 - 19170573
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||  | ||||||||| | ||||||||    
T  19170668 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgt 19170573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 28152123 - 28152218
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||||| ||||||||| || |||||||    
T  28152123 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 28152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 37688162 - 37688055
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| || |||||| |  ||||||| ||     
T  37688162 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaac 37688063  T
Q  109 tagatcat 116  Q
    ||||||||    
T  37688062 tagatcat 37688055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 45198469 - 45198374
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||  ||   ||||||||||||||||||||| ||||||||||    
T  45198469 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgt 45198374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 47579418 - 47579513
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||||| ||||||||| || |||||||    
T  47579418 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 47579513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 49768577 - 49768672
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||||| ||||||||| || |||||||    
T  49768577 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 49768672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 18881306 - 18881375
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||||||| |||||| | ||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  18881306 acatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtatattaagtcaata 18881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 39260261 - 39260152
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||| |||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||| | ||||||||| |||||||||| ||     
T  39260261 gagacgaattcaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaac 39260162  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  39260161 taggtcatct 39260152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 4209504 - 4209600
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | || |||||| |||||||||| || ||| ||||||    
T  4209504 caacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtcatct 4209600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 3443516 - 3443421
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| |  ||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  3443516 gagacgaatccaacaacatcttacatgatattacttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 3443421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 19631445 - 19631548
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtag-aaaaatacagtcaaagtatattaagtcaatattgtatattgttaaataga 112  Q
    ||||||||||||||||||||||||| | |||||||||||| || || || |||||||  |||||||||| ||||||| ||| |||||||| | ||||||     
T  19631445 gaatccaacaacatcttacatgatattatttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaatagg 19631544  T
Q  113 tcat 116  Q
    ||||    
T  19631545 tcat 19631548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 46212479 - 46212384
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  46212479 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 46212384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 23603777 - 23603667
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    ||||| ||||||||||||| ||||||||||| | ||| ||||| || || ||||||||||||   ||||||||| | ||||||||| |||||||||| ||    
T  23603777 tgagacgaatccaacaacaacttacatgatattatttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaa 23603678  T
Q  108 atagatcatct 118  Q
     ||| ||||||    
T  23603677 ctaggtcatct 23603667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 47278403 - 47278305
Alignment:
Q  12 atgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaata 110  Q
    ||||||||||||  ||||||||| ||| | |||||||||||| ||   ||||||||||   ||||||||||||||||||||| || |||||||||||||    
T  47278403 atgaatccaacattatcttacataatattatttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaataatgcatattgttaaata 47278305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 19633978 - 19633869
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||| ||||| || || ||||||||||||  |||||||||  | ||||||||| | |||||||| ||     
T  19633978 gagacgaatccaacaacatcttacatgatattatttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaac 19633879  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  19633878 taggtcatct 19633869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 39195619 - 39195514
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||| |||||| | ||||||||||| ||| |||| |||||||  |||||||||| | | ||||| | |||| ||||| |||    
T  39195619 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaactgtaaattgtcaaa 39195520  T
Q  109 tagatc 114  Q
    ||||||    
T  39195519 tagatc 39195514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 23256067 - 23256175
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||| ||| | ||||| |||||| || ||||||||| ||  ||| |||||| | || |||||| |||||||||| ||     
T  23256067 gagacgaatccaacaacatcttacattatattatttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaac 23256166  T
Q  109 tagatcatc 117  Q
    |||||||||    
T  23256167 tagatcatc 23256175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 40979072 - 40978980
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatg 217  Q
    ||||||||| |||||||||||||| || | | ||| |||||||||| |||||  ||||||| || ||||||||||||  ||||||||||||||    
T  40979072 agggtgaagttaagtcacccttatctaagcgtgcgcgagaataaccatctccggaatatgcagcatgtgattagggaatggttagaggacatg 40978980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 55997256 - 55997352
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | ||||| |||||| || ||||||||||||  ||||||  |||||||||||||| | |||||| | |||||| ||||||    
T  55997256 caacatcttacatgatattatttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaataatatatattatcaaataggtcatct 55997352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 1377164 - 1377258
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||| |||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  1377164 gagacgaatccaacaacatcttacatgatattatttatatttgtgaattagtataaaagta-tgtcaaagtatgtcaagtcaataatgtatattgt 1377258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 5744212 - 5744117
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||| | ||||||||||    
T  5744212 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgt 5744117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 21859048 - 21858941
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| |   ||||| |||| || ||||||||| ||  |||||||||||| ||||||||| |  ||||||| ||     
T  21859048 gagacgaatccaacaacatcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaac 21858949  T
Q  109 tagatcat 116  Q
    ||||||||    
T  21858948 tagatcat 21858941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 21914911 - 21914804
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| |   ||||| |||| || ||||||||| ||  |||||||||||| ||||||||| |  ||||||| ||     
T  21914911 gagacgaatccaacaacatcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaac 21914812  T
Q  109 tagatcat 116  Q
    ||||||||    
T  21914811 tagatcat 21914804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 1613152 - 1613234
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaa 91  Q
    |||||||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| |||| |||||    
T  1613152 gagatgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaa 1613234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 5123279 - 5123177
Alignment:
Q  16 atccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatca 115  Q
    |||||||||||||||||||  || | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| |||||||||| || ||| |||    
T  5123279 atccaacaacatcttacatcttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtca 5123180  T
Q  116 tct 118  Q
    |||    
T  5123179 tct 5123177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 6494720 - 6494817
Alignment:
Q  9 gagatgaatccaacaacatcttacatga--taatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||   || | |||||||||||| || |||| |||| ||  |||||||||| ||||||||||| ||||||||||    
T  6494720 gagacgaatccaacaacatcttacatgtagtattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgt 6494817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 37164130 - 37164052
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||||||| |||||| | ||||||||||| ||| |||||||||||| ||||||||||  ||| ||||| ||||||||||    
T  37164130 acatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatatt 37164052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 47253367 - 47253457
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||    | ||||| |||||||||| ||||  ||||||||||    
T  47253367 agggtgaagctaagtcacccttatataggcgcgcatgataataactgtctccgggttttgcggtgtgtgattagagagcaattagaggaca 47253457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 53987713 - 53987823
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    ||||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||  ||| || ||||||| | ||| ||||    
T  53987713 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaatattgcacatttttaa 53987812  T
Q  108 atagatcatct 118  Q
    || ||||||||    
T  53987813 atggatcatct 53987823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 10181126 - 10181226
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatc 114  Q
    ||||||||||||||||| | |||| | ||||||||||| ||| |||||||||||   |||||| ||| ||||||||||| || | ||||| |||||||||    
T  10181126 aatccaacaacatcttatacgata-tatttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattgtcaaatagatc 10181224  T
Q  115 at 116  Q
    ||    
T  10181225 at 10181226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 14958136 - 14958205
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatat 83  Q
    |||||||||||||||||| |||||| | ||||| ||||| ||| ||||||||||||  ||||||||||||    
T  14958136 gaatccaacaacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatat 14958205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 50971591 - 50971648
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaa 66  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||||||||    
T  50971591 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaa 50971648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 19809791 - 19809842
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctcc 176  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||| ||||||    
T  19809791 agggtgaaactaagtcacccttacataggcgcgcgtgagaataactgtctcc 19809842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 48336648 - 48336722
Alignment:
Q  44 tatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||| ||| ||||||||||||| |||||| ||| ||||||||||| || | ||| |||||||| ||||||    
T  48336648 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatct 48336722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 27982677 - 27982568
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||| ||| |||||| | ||||||||||| | | |||||||||||| ||||| ||| | ||| ||||||| || | ||||| ||     
T  27982677 gagacgaatccaacaacatattatatgatactatttatctttgtattttagtagaaaaatatagtcagagtgtgttaggtcaataatgcacattgtcaac 27982578  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  27982577 taggtcatct 27982568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 42185403 - 42185294
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| |||||||| ||| |||||| | ||||||||||| ||| ||||||||||||  |||||| || |||| ||||| |||| | ||| | |||    
T  42185403 gagacgaatctaacaacattttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaaattaggtcaaaattgcaaattttcaaa 42185304  T
Q  109 tagatcatct 118  Q
    | ||||||||    
T  42185303 tggatcatct 42185294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 42187108 - 42187064
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtg 53  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||    
T  42187108 gagacgaatccaacaacatcttacatgatattatttatctttgtg 42187064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 2674561 - 2674471
Alignment:
Q  139 tcacccttatataggtgcgcgt-gagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatggtgatc 229  Q
    ||||||||||||| | |||||| ||| ||||||||||||  | | ||||||||||||||||||| | ||||||||||| | ||| |||||||    
T  2674561 tcacccttatataagcgcgcgttgagcataaccgtctccggattttgcggcgtgtgattaggga-cagttagaggacacgtgtagggtgatc 2674471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 29844268 - 29844367
Alignment:
Q  19 caacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||| || ||| | ||||||||| | ||| | ||||||||||| || ||||||| |||  |||||| || ||||| | |||||||||||||    
T  29844268 caacaacatcttatataatattatttatctttatatattaatagaaaaatacggttaaagtatcttagatcaataatgcatattttgaaatagatcatct 29844367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 31152790 - 31152719
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  31152790 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 31152719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 39786486 - 39786391
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | || | ||||||| || |||| |||| ||  |||||||||| | || |||||| | ||||||||    
T  39786486 gagacgaatccaacaacatcttacatgatattattaaactttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgt 39786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 43047516 - 43047445
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  43047516 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 43047445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 43447294 - 43447223
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  43447294 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 43447223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 4271953 - 4272019
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||| |||||||| |||||| | ||||||||| | ||| | |||||||||||||||||||||    
T  4271953 gaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaatacagtcaaagta 4272019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 24505640 - 24505570
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagt 79  Q
    |||| ||||| ||| |||||||| |||||  | ||||||||||| ||| ||| ||||||||||||||||||    
T  24505640 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaagt 24505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 55190662 - 55190600
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  55190662 tttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 55190600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 27976699 - 27976598
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| |||||||||| | |||||| | ||||||||||| ||| | || |||||||   ||||| |||||||  |||||||||||| |||| |||    
T  27976699 gagacgaatcaaacaacatctaatatgatattatttatctttgtatattaataaaaaaatatgatcaaaatatattagatcaatattgtatcttgtcaaa 27976600  T
Q  109 ta 110  Q
    ||    
T  27976599 ta 27976598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 28914497 - 28914408
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgta 98  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||| | ||| ||||||||||||  |||||||||  ||| ||||| ||||||    
T  28914497 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgta 28914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 464
Target Start/End: Original strand, 39194496 - 39194525
Alignment:
Q  435 caacatattttatttttattaatcatgttt 464  Q
    ||||||||||||||||||||||||||||||    
T  39194496 caacatattttatttttattaatcatgttt 39194525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 10304972 - 10305028
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgta 98  Q
    ||||||||| | ||| |||| ||||||||||||||||||||| | ||||| ||||||    
T  10304972 tttatctttatatattagtataaaaatacagtcaaagtatatcatgtcaaaattgta 10305028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37667707 - 37667795
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    ||||| ||||| ||| ||||||||  ||||| | ||||||||||| ||| | ||||||||||  ||||||||| |||| ||||| ||||    
T  37667707 tgagacgaatctaacgacatcttatttgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattg 37667795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 39260475 - 39260399
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaa 91  Q
    |||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||| || |||| |||||    
T  39260475 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaaataaattaggtcaa 39260399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 47834093 - 47834149
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  47834093 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 47834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 50685044 - 50684940
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||| |||||||| |||||| | ||||||||| | ||| ||||||||||||   ||||||||  |||  |||| |||| ||||| ||||||||||    
T  50685044 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaagtaagttagatcaaaattgcatatttttaaatagat 50684945  T
Q  114 catct 118  Q
     ||||    
T  50684944 tatct 50684940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 55291188 - 55291108
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||||||||| || ||| | ||||||||||| ||| |||| ||||||| |||||||  |||| | ||||| ||||||||||    
T  55291188 caacatcttatataatattatttatctttgtatattagtacaaaaatatagtcaaaacatatcaggtcaaaattgtatatt 55291108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 38737502 - 38737398
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||||| |||||| || ||||||||||||| || ||||| ||||||||    
T  38737502 gaatcaaacaacatcttacatgataatgtttatctttatatattagtagaaaaatacaatcaaagaatgttaagtcaatattatacattgtcaaatagat 38737403  T
Q  114 catct 118  Q
    |||||    
T  38737402 catct 38737398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 16265173 - 16265260
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  16265173 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 16265260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 16266302 - 16266389
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  16266302 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 16266389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 21034658 - 21034549
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||| ||||||||| | ||||||||||||  | |||||||||||| | ||||||||| ||||||||||| |||||||||| |||    
T  21034658 gagaggaatccaacaacatcctacatgatattatttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaa 21034559  T
Q  109 tagatcatct 118  Q
    ||||| ||||    
T  21034558 tagattatct 21034549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 3898692 - 3898605
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||| ||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  3898692 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 3898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 24982491 - 24982578
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| | ||||||||    
T  24982491 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgt 24982578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 25531910 - 25532005
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| ||||||||||    
T  25531910 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgt 25532005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 3529308 - 3529409
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||||||  |||||||||| ||||||||||| | |||||||| |||    
T  3529308 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaa 3529407  T
Q  109 ta 110  Q
    ||    
T  3529408 ta 3529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 37281224 - 37281333
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| | |||||||| ||     
T  37281224 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaac 37281323  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  37281324 tagatcatct 37281333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 42708632 - 42708727
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  42708632 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 42708727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 43680210 - 43680297
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| | |||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  43680210 tccaacaacatcttataagatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 43680297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 50876496 - 50876591
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  50876496 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 50876591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 26441779 - 26441861
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||| |||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  26441779 caacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 26441861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 29161980 - 29162080
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||| | ||||||||| |||||||||| || |||||    
T  29161980 gaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaactagat 29162079  T
Q  114 c 114  Q
    |    
T  29162080 c 29162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 30529179 - 30529084
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||| ||| | ||||||||| ||||||||||    
T  30529179 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgt 30529084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 52379121 - 52379216
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  52379121 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 52379216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 23569798 - 23569708
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||  | ||||||||| | ||||||||    
T  23569798 gaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgt 23569708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 50481413 - 50481510
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatag 111  Q
    |||||||||||||||||||||| || | |||| ||||||| || |||||||||| |  |||||||||| ||| ||||||| |||||||||| ||||||    
T  50481413 gaatccaacaacatcttacatggtattatttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaatag 50481510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 4605136 - 4605240
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||||||||| ||||||||||||| | |||||||||||| || | ||| ||||||  | |||||||| | ||||||||| |||||||||| |||||| |    
T  4605136 gaatccaacaatatcttacatgatattatttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggt 4605235  T
Q  114 catct 118  Q
    |||||    
T  4605236 catct 4605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 39354393 - 39354309
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||| ||||| |||||||||    
T  39354393 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaata 39354309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38458862 - 38458957
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||| ||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  38458862 gagacgaatccaacaacaccttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 38458957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 50539392 - 50539487
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||  ||||||||||    
T  50539392 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgt 50539487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 48264935 - 48264845
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||  |||||||||||| || |||||| || |||||||    
T  48264935 gaatccaacaacatcttacatgatattatttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgt 48264845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 47222361 - 47222454
Alignment:
Q  23 aacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcat 116  Q
    ||||||||| |||||| | |||||||||||| || |||| |||||||  |||||||||| ||||||||||| |||||||| | |||||| ||||    
T  47222361 aacatcttaaatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcat 47222454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 48219765 - 48219676
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||||| | |||||||||||| || | ||||||| ||  ||||| |||||| ||||||||| || |||||||    
T  48219765 aatccaacaacatcttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgt 48219676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 16751582 - 16751487
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||  |||| ||||||||||| | |||||||||||| || |||| |||||||  |||||| ||| ||||||||||| ||||||||||    
T  16751582 gagacgaatccactaacaacttacatgatattatttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgt 16751487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 32988478 - 32988383
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||| ||| | ||||||||| ||||||||||    
T  32988478 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgt 32988383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 49805381 - 49805286
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||  |||||   |||||||||| | ||||||| | ||||||||||    
T  49805381 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgt 49805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 48376285 - 48376378
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaata 110  Q
    ||||||||||||||||||||||||| | | ||||||||||   || |||||||| |   ||||||||| ||||||||||| |||||||||| |||||    
T  48376285 gaatccaacaacatcttacatgatattatctatctttgtg---aattagaaaaacatgttcaaagtatcttaagtcaataatgtatattgtcaaata 48376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 1849832 - 1849928
Alignment:
Q  9 gagatgaatccaacaacatcttacatgata-atgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||||||||||  | ||||| |||||| || ||||||||| |   |||||||||| | ||||||||| ||||||||||    
T  1849832 gagacgaatccaacaacatcttacatgatacttatttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 1849928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 27990844 - 27990760
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| |||| |||||||||||||||||||  | ||||| ||||| ||| ||||||||||||  |||||||||| ||| |||||||    
T  27990844 gagacgaattcaacaacatcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaata 27990760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 32968229 - 32968133
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||||| |||||| | ||||||||||| ||| |||| ||||||||||||||| ||| | |  |||| |||||||||||| ||| || ||||||    
T  32968229 caacatcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaaacaggtcatct 32968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 14075866 - 14075960
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||| |||||||||||||||| ||| | ||||| |||||| || ||||||||||||  || ||| ||| ||||||||||| ||||||||||    
T  14075866 gagacgaattcaacaacatcttacat-atattatttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgt 14075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 23330590 - 23330677
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagt-atattaagtcaatattgtatat 101  Q
    |||||||||||||||||||||||| | ||||| |||||| || || | ||||| |  |||||||| || |||||||||||||||||||    
T  23330590 aatccaacaacatcttacatgatattatttatgtttgtgaattagcataaaaacattgtcaaagtaatgttaagtcaatattgtatat 23330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 8019039 - 8019089
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctcc 176  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||||||||    
T  8019039 gggtgaagctatgtcacccttatataggcgtgtgtgagaataaccgtctcc 8019089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 2140949 - 2140904
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataacc 170  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  2140949 agggtgaagctaagtcacccttataaagacgcgcgtgagaataacc 2140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 26543995 - 26543890
Alignment:
Q  11 gatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaata 110  Q
    |||||||| ||| |||||||| || ||| | ||||||||||| ||| ||||||||||||  |||||||||  ||| ||||| |||||| ||| | ||| |    
T  26543995 gatgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgtacattttcaaaca 26543896  T
Q  111 gatcat 116  Q
    ||||||    
T  26543895 gatcat 26543890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 31971516 - 31971415
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||| |||||| | |||||||||||  || ||||||||||||   ||||| ||| |||| | |||| | |||||||| |||    
T  31971516 gagacgaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaaa 31971417  T
Q  109 ta 110  Q
    ||    
T  31971416 ta 31971415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 6017388 - 6017459
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  6017388 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 6017459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 7075269 - 7075340
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  7075269 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 7075340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 10100452 - 10100523
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  10100452 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 10100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 49903630 - 49903733
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatc 114  Q
    |||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||   |||||||| |||| ||||| |||  | ||| |||||| ||||    
T  49903630 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaggtcaaaatttcacatttttaaatggatc 49903729  T
Q  115 atct 118  Q
    ||||    
T  49903730 atct 49903733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 5117373 - 5117443
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagt 79  Q
    |||| ||||| ||| |||||||| |||||  | ||||||||||| ||| ||| ||||||||||||||||||    
T  5117373 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaagt 5117443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 5459706 - 5459620
Alignment:
Q  129 tgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    ||||| ||||||| ||| | ||||  ||||||||||||||||||| ||    | ||||||||||||||||||||| |||| ||||||    
T  5459706 tgaagttaagtcagcctaacatagacgcgcgtgagaataaccgtcaccgtgttttgcggcgtgtgattagggagcagttaaaggaca 5459620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 32565878 - 32565944
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtca 75  Q
    |||| |||||||| |||||||||||||||| | |||||||||||| || | || |||||||| ||||    
T  32565878 gagacgaatccaaaaacatcttacatgatattatttatctttgtgaattactaaaaaaatacggtca 32565944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 40058906 - 40058979
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtata--agtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||||  ||||||||||||| |||||||||    
T  40058906 gagacgaatctaacgacatcttatatgatattatttatctttgtatatattagtagaaaaatacggtcaaagta 40058979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 51924908 - 51924994
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagt-agaaaaatacagtcaaagtatattaagtcaata 93  Q
    ||||| |||||||||||||||||| |||||| | ||||||||||| |||  || | |||||||| |||||| ||| ||| |||||||    
T  51924908 tgagacgaatccaacaacatcttatatgatattatttatctttgtatattggtaaaaaaaatacggtcaaaatatgttaggtcaata 51924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 52688660 - 52688587
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataa--gtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |  ||||||||||||||||||||||    
T  52688660 gagacgaatctaacgacatcttatatgatattatttatctttgtatattatagtagaaaaatacagtcaaagta 52688587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 3277623 - 3277728
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaataca-gtcaaagtatattaagtcaatattgtatattgttaaataga 112  Q
    |||| ||||||||||||| || ||| | ||||||||| | ||| |||||||||||| | ||||||||||||||  |||||| || | | | | |||||||    
T  3277623 gaatacaacaacatcttatattatattatttatctttatatattagtagaaaaatataggtcaaagtatattagatcaatagtgcaaaatatcaaataga 3277722  T
Q  113 tcatct 118  Q
    ||||||    
T  3277723 tcatct 3277728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 31932133 - 31932226
Alignment:
Q  25 catcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||| |||||| | ||||| ||||| ||| ||||||||||||  ||||||||| | || ||||| |||| | ||| | |||||||||||||    
T  31932133 catcttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatct 31932226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 41501736 - 41501627
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||| | |||| || ||||| ||  ||   ||||||||| | || |||||| |||||||||| ||     
T  41501736 gagacgaatccaacaacatcttacatgatattatttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaac 41501637  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  41501636 taggtcatct 41501627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 2612019 - 2612123
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    |||||||| ||||| ||| || ||| | ||||||||| | ||| |||| ||||||||||||||| ||| ||| ||||||| |  | ||||| ||||||||    
T  2612019 gaatccaataacattttatattatattatttatctttttatattagtaaaaaaatacagtcaaaatatgttaggtcaataatcaacattgtcaaatagat 2612118  T
Q  114 catct 118  Q
     ||||    
T  2612119 tatct 2612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 5606330 - 5606390
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  5606330 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5606390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 5945894 - 5945834
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  5945894 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 23391391 - 23391463
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtat 81  Q
    ||||||||||||||||| ||||| |||||| | |||||  || | ||| |||| |||||||| ||||||||||    
T  23391391 gagatgaatccaacaacttcttatatgatattatttattattatatattagtataaaaatacggtcaaagtat 23391463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 34273177 - 34273268
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatg 217  Q
    |||||||||| | ||| |||||||||||||| || || ||||||||| |||||   | ||||||||| | ||| ||| |||||||||||||||    
T  34273177 agggtgaagcaatgtcgcccttatataggtgtgcttgggaataaccgcctccaggttttgcggcgtgcggtta-ggaacggttagaggacatg 34273268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 38786890 - 38786994
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| |||||||||||| |||||| | ||||||||||| ||| ||| ||||||||   ||||||||  |||  |||| |||| ||||| | |||| |||    
T  38786890 gaatctaacaacatcttatatgatattatttatctttgtatattagttgaaaaatatgatcaaagtaagttatatcaaaattgcatattttcaaatggat 38786989  T
Q  114 catct 118  Q
    |||||    
T  38786990 catct 38786994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 44741472 - 44741412
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  44741472 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 44741412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 50295875 - 50295935
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| |||||||||||| |||||| | ||||||||||| ||| || |||||||||    
T  50295875 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagcagaaaaata 50295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 52749410 - 52749350
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  52749410 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 52749350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 22613838 - 22613743
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||| |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  22613838 gagatgattccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 22613743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 16048225 - 16048312
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  16048225 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 16048312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 37516277 - 37516372
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| ||||||||||    
T  37516277 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgt 37516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 39405904 - 39405991
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  39405904 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 39405991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 4299954 - 4299867
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| |||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  4299954 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 4299867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 37843704 - 37843595
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||| |||||||| || ||||||||||||  |||||||||| | ||||||||| |||||||||| ||     
T  37843704 gagacgaatccaacaacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaag 37843605  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  37843604 taggtcatct 37843595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 39036542 - 39036651
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  ||||||||||   ||||||||| |||||||||| ||     
T  39036542 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaac 39036641  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  39036642 taggtcatct 39036651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 41411286 - 41411185
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||  ||||||||||| | |||||||| |||    
T  41411286 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaa 41411187  T
Q  109 ta 110  Q
    ||    
T  41411186 ta 41411185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 970278 - 970365
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| |||||| | |||||||||||| || ||||||||||||  ||||||||||||||||| |||| ||||||||||    
T  970278 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgt 970365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 23988709 - 23988804
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  23988709 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 23988804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 40512809 - 40512714
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| || ||||||||||| | || |||||| ||||||||||    
T  40512809 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgt 40512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 42148439 - 42148534
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  42148439 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 42148534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 8939001 - 8939091
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    ||||||||||||||||||| |||||||| |  | ||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||    
T  8939001 agggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatgcggcgtgtgattagggagcggttagaggaca 8939091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 1830787 - 1830888
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||||||  |||||||||  ||||||||||| | |||||||| |||    
T  1830787 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaa 1830886  T
Q  109 ta 110  Q
    ||    
T  1830887 ta 1830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 2864086 - 2864179
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || ||||||||||||  || ||||||| ||||||||||| ||||||||    
T  2864086 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatatt 2864179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 14475351 - 14475250
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcat 116  Q
    |||||||||||||||||||||| | ||| |||||||| || ||||||||||||  |||||||||| | ||||||||| |||||||||| || ||| ||||    
T  14475351 tccaacaacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 14475252  T
Q  117 ct 118  Q
    ||    
T  14475251 ct 14475250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 30779869 - 30779780
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||||| | |||||||||||  || |||||||||||| | ||||||| |||||| |||||| ||||||||||    
T  30779869 aatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgt 30779780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 35290418 - 35290527
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||| ||| | |||||||||||| || ||||||||||||  ||||||||||   ||||||||| |||||||||| ||     
T  35290418 gagacgaatccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaac 35290517  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  35290518 taggtcatct 35290527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 5213051 - 5212956
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  5213051 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 5212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 19868815 - 19868724
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtata 100  Q
    |||| |||||||| |||||||||||||||| | |||||||||||| || ||||||||||||   ||||||||| ||||||||||| ||||||    
T  19868815 gagacgaatccaataacatcttacatgatattatttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaataatgtata 19868724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 29627400 - 29627495
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| || ||||||||||| | ||||||||  ||||||||||    
T  29627400 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgt 29627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 39894913 - 39895008
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  39894913 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 39895008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 19087729 - 19087643
Alignment:
Q  25 catcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatag 111  Q
    ||||| |||||||| | |||||||||||| || ||||||||||||  ||||||||||||||| |||||| |||||||||| ||||||    
T  19087729 catctaacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaaatag 19087643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 27083239 - 27083149
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    ||||||||| ||||||||||||  ||||| ||||||||||||||| |||||||   | |||||||||||||||| |||| |||||||||||    
T  27083239 agggtgaagttaagtcacccttgcataggcgcgcgtgagaataactgtctccaggttttgcggcgtgtgattagagagcagttagaggaca 27083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 4924967 - 4924858
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| | |||||||| ||     
T  4924967 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaat 4924868  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  4924867 taggtcatct 4924858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 32002137 - 32002048
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  32002137 aatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 32002048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 40316254 - 40316355
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||||||  |||||| ||  ||||||||||| | |||||||| |||    
T  40316254 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaaa 40316353  T
Q  109 ta 110  Q
    ||    
T  40316354 ta 40316355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 29279038 - 29278935
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatgg 224  Q
    ||||| ||| ||||||||||||||||||| | |  |||||||||||| |||    |||||  ||||||||||||||||||||||||||||||| |||||     
T  29279038 agggtaaagttaagtcacccttatataggcgtgtctgagaataaccgcctctgggatatggagcgtgtgattagggagcggttagaggacatgtgtatga 29278939  T
Q  225 tgat 228  Q
    ||||    
T  29278938 tgat 29278935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38698095 - 38698190
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | || ||||||||  || |||| |||||||  |||||||||||| ||||||||| || |||||||    
T  38698095 gagacgaatccaacaacatcttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgt 38698190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 20025373 - 20025465
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatg 217  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||||||    | || || |||||||||||||| ||||| ||| ||||    
T  20025373 agggtgaagctaggtcacccttatacaggcgcgcgtgagaataaccgtctccgggttttgtggtgtgtgattagggagtggttataggtcatg 20025465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 25563642 - 25563741
Alignment:
Q  19 caacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||||||   |||||||||||| || ||||||||||||   ||||||||| |||| |||||| |||| ||||| || ||| ||||||    
T  25563642 caacaacatcttacatgatataatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtcatct 25563741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 35448126 - 35448031
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||| ||| || | |||||||||||| || |||| |||| ||  |||||||||||| ||||||||| || |||||||    
T  35448126 gagacgaatccaacaacatcttagatgttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 35448031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 43517189 - 43517094
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||| |||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||| | ||||||||| | ||||||||    
T  43517189 gagacgaatccaataacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgt 43517094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 5985068 - 5985000
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaa 77  Q
    |||| ||||||||||| |||||| |||||| | ||||||||||| ||| ||||||||||||| ||||||    
T  5985068 gagacgaatccaacaatatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaa 5985000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 24520349 - 24520405
Alignment:
Q  21 acaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaa 77  Q
    |||||||||||||||||| ||||||||||| || || |||||||||||| |||||||    
T  24520349 acaacatcttacatgatattgtttatctttatgaattagtagaaaaatatagtcaaa 24520405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 27477673 - 27477752
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagt 88  Q
    |||| ||||||||| |||| ||| |||||| | ||||||||||| ||| |||| |||||||| |||||||||| ||||||    
T  27477673 gagacgaatccaacgacatattatatgatattatttatctttgtatattagtaaaaaaatacggtcaaagtatgttaagt 27477752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 32334767 - 32334672
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || |||| |||| |   |||||||||| | || |||||| ||||||||||    
T  32334767 gagacgaatccaacaacatcttacatgatattatttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgt 32334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 5364552 - 5364651
Alignment:
Q  9 gagatgaatccaacaacatcttacatg----ataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||    ||| | |||||||||||| || ||||||||| ||  |||||| ||| | ||||||||| ||||||||||    
T  5364552 gagacgaatccaacaacatcttacatgcatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgt 5364651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 26994606 - 26994517
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcg-tgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    ||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |  | ||||||||||||||||||| || ||||||||||    
T  26994606 gggtgaagcaaggtcacccttatataggcgcgcgttgagagtaaccgtcttcgagttttgcggcgtgtgattaggga-cgattagaggaca 26994517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 43067386 - 43067448
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||  || ||||||||||||  ||||||||||||||| |||||| ||||||||||    
T  43067386 tttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgt 43067448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 19991013 - 19990968
Alignment:
Q  184 gcggcgtgtgattagggagcggttagaggacatgggtatggtgatc 229  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19991013 gcggcgtgtgattagggagcggttagaagacatgtgtagggtgatc 19990968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 28143046 - 28142981
Alignment:
Q  20 aacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatatta 85  Q
    |||||||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| ||||    
T  28143046 aacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaatta 28142981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 1098304 - 1098233
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  1098304 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 1098233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 9936823 - 9936930
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||| || ||||  |||| |||| | ||| |||||    
T  9936823 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataaattagatcaaaattgcacatttttaaa 9936922  T
Q  109 tagatcat 116  Q
    || |||||    
T  9936923 tatatcat 9936930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 13548342 - 13548271
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  13548342 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 13548271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 20022989 - 20022918
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  20022989 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20022918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 20040350 - 20040421
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  20040350 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 30211676 - 30211747
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  30211676 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 30211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 31191112 - 31191199
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| | ||||||||||  ||||||||| |||| ||||| ||||    
T  31191112 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattg 31191199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 40316947 - 40316860
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||| ||||| |||| ||||| ||||    
T  40316947 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaattg 40316860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 41263064 - 41263135
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  41263064 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 41263135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 41410594 - 41410681
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||| ||||| |||| ||||| ||||    
T  41410594 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaattg 41410681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 7449883 - 7449929
Alignment:
Q  127 ggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtc 173  Q
    ||||||||||||||||||||||||| | | | |||||||||||||||    
T  7449883 ggtgaagctaagtcacccttatatatgcgtgtgtgagaataaccgtc 7449929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 21961359 - 21961445
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatatt 95  Q
    |||| ||||||||||||||||||  ||||| | ||||| ||| | ||| |||||| |||||  |||||||||| | |||||||||||    
T  21961359 gagacgaatccaacaacatcttaattgatattatttatttttatatattagtagataaatatggtcaaagtatgtcaagtcaatatt 21961445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 35641892 - 35641826
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtat 81  Q
    ||||||||||||| ||| |||||| | ||||||||| | ||| ||||||||||||  ||||||||||    
T  35641892 aatccaacaacattttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtat 35641826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 2805928 - 2805839
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaa-tacagtcaaagtatattaagtcaatattg 96  Q
    ||||| ||||| ||| ||||| || |||||| | ||||||||||| ||| |||| ||||| ||||||||||||| |||| ||||| ||||    
T  2805928 tgagacgaatctaacgacatcatatatgatattatttatctttgtatattagtaaaaaaaatacagtcaaagtaaattaggtcaaaattg 2805839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 19889785 - 19889842
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaa 66  Q
    |||| |||||||||||| |||||||||||| | |||||||||||| || | |||||||    
T  19889785 gagacgaatccaacaacgtcttacatgatattatttatctttgtgaattattagaaaa 19889842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 34169958 - 34169849
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||| |||||||| |||||| | ||||||| ||| ||| ||||||||||||  ||||||||| | ||  |||| |||| | ||| | |||    
T  34169958 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaaactagatcaaaattgcaaattttcaaa 34169859  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  34169858 tagatcatct 34169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 1781095 - 1781151
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  1781095 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 1781151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 19344634 - 19344694
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  19344634 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 19344694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 24546433 - 24546509
Alignment:
Q  127 ggtgaagctaagt-cacccttatataggtgcgcgtgaga-ataaccgtctccaaaatatgcggcgtgtgattaggga 201  Q
    |||||||| |||| |||||||||||||| |||||| ||  ||||||||||||    |||||||||||||||||||||    
T  24546433 ggtgaagcaaagttcacccttatataggcgcgcgttagccataaccgtctccgggttatgcggcgtgtgattaggga 24546509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 36665150 - 36665259
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||||||||||||||| |||||||||| || | |||||||||||| || |||||||||||| ||||||||||| |||||| |||| |||||||||| |||    
T  36665150 gagatgaatccaacaatatcttacatggtattatttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaa 36665249  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  36665250 taggtcatct 36665259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 32951257 - 32951158
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcat 116  Q
    ||||||||||||||| |||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| |||||||||| || ||||||||    
T  32951257 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcat 32951158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 37833032 - 37833139
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| || ||||||||||     
T  37833032 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaac 37833131  T
Q  109 tagatcat 116  Q
    ||| ||||    
T  37833132 taggtcat 37833139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 17053004 - 17053091
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  ||||||||||||||| |||||| ||||||||||    
T  17053004 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgt 17053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 5030119 - 5030009
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatg-tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    |||| |||||||||||||||||| ||||||||  ||||||||||| ||| ||||||||| ||| |||||||||||||||||||||| || | ||| ||||    
T  5030119 gagacgaatccaacaacatcttatatgataattatttatctttgtatattagtagaaaagtacggtcaaagtatattaagtcaataatgcacatttttaa 5030020  T
Q  108 atagatcatct 118  Q
    |||| ||||||    
T  5030019 ataggtcatct 5030009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 51062521 - 51062615
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | ||||||||| ||||||||    
T  51062521 tgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatatt 51062615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 35717984 - 35717883
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||| ||| | |||||||||||| || ||||||||||||  |||||| ||| ||||||||||| |||||||||| |||    
T  35717984 gagacgaatccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaaa 35717885  T
Q  109 ta 110  Q
    ||    
T  35717884 ta 35717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 7459949 - 7459854
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  7459949 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 7459854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 29728227 - 29728120
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||| ||| | ||||||||| |||||||||| ||     
T  29728227 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaac 29728128  T
Q  109 tagatcat 116  Q
    ||||||||    
T  29728127 tagatcat 29728120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 43137983 - 43138078
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  43137983 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 43138078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 48690185 - 48690294
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||| |||||| | ||||||||||| ||| ||||||||||||  || ||| ||| | ||||||||| || | |||||||||    
T  48690185 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaatattgttaaaatatgtcaagtcaatagtgcaaattgttaaa 48690284  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  48690285 tagatcatct 48690294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 52668616 - 52668520
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||| |||| |||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  52668616 tgagacgaattcaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 52668520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 1327444 - 1327539
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  1327444 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 1327539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 8559134 - 8559039
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||  ||  |||||||||||| ||||||||| || |||||||    
T  8559134 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgt 8559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 18659184 - 18659279
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  18659184 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 18659279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 21907128 - 21907223
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  21907128 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 21907223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38492183 - 38492278
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||| |||||||||| | |||||||||||  || ||||||||||||  |||||||||| |||| |||||| ||||||||||    
T  38492183 gagacgaatccaacaacattttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgt 38492278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38833795 - 38833890
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||| ||| | ||||||||| ||||||||||    
T  38833795 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgt 38833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 54840257 - 54840162
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||||| ||||||||||    
T  54840257 gagatgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 54840162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 48143900 - 48144002
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    |||| |||||||||||||||||||| | |||||||||||  || ||||||||||||  |||||| ||||||| ||||||| | |||||||| |||||| |    
T  48143900 gaattcaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaataggt 48143999  T
Q  114 cat 116  Q
    |||    
T  48144000 cat 48144002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 7671442 - 7671333
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||  | | ||||||||||  ||||||  || ||||||||||||||| | |||| |||    
T  7671442 gagacgaatccaacaacatcttacatgatattatttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaatattgttttttgtcaaa 7671343  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  7671342 taggtcatct 7671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 15503155 - 15503264
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||| ||| | ||| ||||| |  || ||||||||||||   ||||||||||||||||||||| |||||||| | ||     
T  15503155 gagacgaatccaacaacatcttacataatattatttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaac 15503254  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  15503255 tagatcatct 15503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 32285299 - 32285210
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||| | ||||||||| ||||||||||    
T  32285299 aatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgt 32285210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 10571273 - 10571178
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||  || |||| |||||||  |||||||||| | ||||||||| ||||||||||    
T  10571273 gagaagaatccaacaacatcttacttgatattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 10571178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 3547550 - 3547440
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaa-tacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    |||| ||||||||||||||||||||| ||| | |||||| ||||| |  |||| ||||| ||  |||||||||| ||||||||||| |||||||||| ||    
T  3547550 gagacgaatccaacaacatcttacattatattatttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 3547451  T
Q  108 atagatcatct 118  Q
    |||| ||||||    
T  3547450 ataggtcatct 3547440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 49057993 - 49058097
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||||||||||||||||||| | |||||||||||| || ||||||||||||   ||||||||  | ||||||||| | |||||||| ||| || |    
T  49057993 gaatctaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaaagaggt 49058092  T
Q  114 catct 118  Q
    |||||    
T  49058093 catct 49058097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 25097316 - 25097221
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||| |||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | |||||||   ||||||||||    
T  25097316 gagacgaatcctacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgt 25097221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 45167431 - 45167526
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||| ||| | ||||||||| ||||||||||    
T  45167431 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgt 45167526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 3086276 - 3086347
Alignment:
Q  12 atgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatat 83  Q
    ||||||||||||| |||||| |||||| | ||||||||||| ||| |||| |||||||  ||||||||||||    
T  3086276 atgaatccaacaatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtatat 3086347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 36179066 - 36179153
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||   |||||||| |||||||||| ||||    
T  36179066 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaagtcaaaattg 36179153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 54673910 - 54674017
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||| |||||| | |||||||||||  || ||||||||||||   ||||||||  | || |||||| | |||||||| |||    
T  54673910 gagaagaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaaa 54674009  T
Q  109 tagatcat 116  Q
     |||||||    
T  54674010 cagatcat 54674017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 4238590 - 4238528
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||| || ||| ||||||||  ||||||||||||||||| |||| ||||||||||    
T  4238590 tttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgt 4238528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 46483682 - 46483789
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||| ||||||||| ||| | |||||||||||| || ||||||||| ||  |||  ||||| | || |||||| |||||||||| ||     
T  46483682 gagacgaatccaacaaaatcttacataatattatttatctttgtgaattagtagaaaagtatggtc--agtatgtcaaatcaataatgtatattgtcaac 46483779  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  46483780 tagatcatct 46483789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 10819373 - 10819482
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||| || |||||||| |||||| | ||||||| ||| ||| ||||||||||||| | |||||||| ||| || |||| || ||||| | |||    
T  10819373 gagacgaatccgacgacatcttatatgatattatttatctgtgtatattagtagaaaaatactgccaaagtatgttaggtaaatagtgcatattttcaaa 10819472  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  10819473 taggtcatct 10819482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 47638187 - 47638296
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| || ||||||| | |||||| | |||||||||||| || ||||||||| ||  |||||||||| | || |||||| |||||||||| ||     
T  47638187 gagacgaatcaaataacatctcatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaat 47638286  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  47638287 taggtcatct 47638296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 53066505 - 53066611
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    ||||| ||||||||||||||||||    ||| | |||||||||||| || ||||||||| ||   ||||||||| | ||||||||| | |||||||| ||    
T  53066505 tgagacgaatccaacaacatctta----atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaa 53066600  T
Q  108 atagatcatct 118  Q
     ||||||||||    
T  53066601 ctagatcatct 53066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 1770933 - 1770993
Alignment:
Q  142 cccttatataggtgcgcgt-gagaataaccgtctccaaaatatgcggcgtgtgattaggga 201  Q
    ||||||||||||||||||| | | |||||||||||| || |||||||||| ||||||||||    
T  1770933 cccttatataggtgcgcgttgtgcataaccgtctccgaattatgcggcgtatgattaggga 1770993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 8440595 - 8440511
Alignment:
Q  10 agatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtaga-aaaatacagtcaaagtatattaagtcaata 93  Q
    |||||||||||||||||||||| |||||| | ||||||||||| ||| |||| | |||||| ||| || |||| ||| |||||||    
T  8440595 agatgaatccaacaacatcttatatgatattatttatctttgtatattagtaaagaaaatatagttaaggtatgttaggtcaata 8440511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 10435274 - 10435326
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||||||||||||||||| ||| | |||||||||||| || ||||||||||||    
T  10435274 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaata 10435326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 18971494 - 18971590
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||||| |||||| | ||||| ||| | ||| |||||||||||| ||||||| |||||||| |||| | || | |||||| ||||| ||||||    
T  18971494 caacatcttatatgatattatttatttttatatattagtagaaaaatatagtcaaaatatattaattcaacaatgcacattgtttaataggtcatct 18971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 28958934 - 28959038
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||| |||||||| |||||| | ||||||||| | ||| ||||||||||||  |||||||||   || ||||| |||| | ||| ||||||||||    
T  28958934 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagat 28959033  T
Q  114 catct 118  Q
    |||||    
T  28959034 catct 28959038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 39099092 - 39099008
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| ||||| |||||||||| | |||||| | ||||||||||| ||| | |||||||||| ||||||||| ||| || ||||||    
T  39099092 gagacgaatctaacaacatctaatatgatattatttatctttgtatattaatagaaaaatatagtcaaagtttatcaattcaata 39099008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 46866472 - 46866412
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| |||||||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  46866472 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 46866412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 48927731 - 48927803
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  48927731 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 48927803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 50673791 - 50673719
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||  ||||||||| ||||    
T  50673791 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattg 50673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 9484725 - 9484654
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  9484725 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 9484654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 12948169 - 12948098
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  12948169 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 12948098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 23631539 - 23631594
Alignment:
Q  26 atcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtat 81  Q
    |||||| |||||| | ||||||||||| ||| ||||||||||||| ||||||||||    
T  23631539 atcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtat 23631594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 27849083 - 27849126
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgt 52  Q
    |||| ||||||||||||||||||||||||| | |||||||||||    
T  27849083 gagacgaatccaacaacatcttacatgatattatttatctttgt 27849126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 29455638 - 29455709
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  29455638 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 29455709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 29793308 - 29793379
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  29793308 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 29793379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 34263634 - 34263705
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  34263634 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 34263705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 34555280 - 34555209
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  34555280 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 34555209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 49076356 - 49076427
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  49076356 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 49076427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 53274930 - 53274985
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    ||||| |||||||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  53274930 gaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 53274985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 21271971 - 21271897
Alignment:
Q  19 caacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| |||||||| |||||||| |||||||| || ||| |||| || |||||  ||||||||| |||||||||||    
T  21271971 caacgacatcttatatgataatatttatcttcgtatattagtataacaatacgatcaaagtatgttaagtcaata 21271897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 30429902 - 30429852
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgc-gtgagaataaccgtct 174  Q
    |||||||||||||||||| |||||||||| |||| |||| |||||||||||    
T  30429902 agggtgaagctaagtcactcttatataggcgcgctgtgaaaataaccgtct 30429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 42098562 - 42098628
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  42098562 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 42098628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 47069502 - 47069464
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  47069502 tttatctttgtatatcagtagaaaaatacagtcaaagta 47069464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 54684609 - 54684679
Alignment:
Q  20 aacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtca 90  Q
    |||||||||||| || ||| | ||||||||||| ||| ||||||||||||| |||||| ||| || |||||    
T  54684609 aacaacatcttatataatattatttatctttgtatattagtagaaaaatacggtcaaaatatgtttagtca 54684679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 45093853 - 45093939
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgt 97  Q
    |||| |||||||| || |||||||||||| ||  ||||| ||||| || ||||||||||||   ||||| ||| |||||||||||||||    
T  45093853 gagacgaatccaataatatcttacatgattat--ttatcgttgtgaattagtagaaaaatatgatcaaaatatgttaagtcaatattgt 45093939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 46818343 - 46818428
Alignment:
Q  33 atgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||| | ||||||||||| ||| ||||| |||| | |||||||||| ||||  |||| |||||| ||| |||||| ||||||||    
T  46818343 atgatattatttatctttgtatattagtagtaaaagagagtcaaagtaaattagatcaaaattgtacatttttaaatggatcatct 46818428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 50888450 - 50888365
Alignment:
Q  33 atgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||| | ||||||||||| ||| || ||||||||| ||||||| ||| ||  ||||||| || ||||| | |||||||||||||    
T  50888450 atgatattatttatctttgtatattagcagaaaaatatagtcaaattatgtttggtcaatagtgcatattttcaaatagatcatct 50888365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 901018 - 901078
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  901018 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 901078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 1778267 - 1778191
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||| | |||  |||||||||||   |||||||||||||| |||||| || | ||||| |||||||||||||    
T  1778267 tttatctttatatatttgtagaaaaatatgatcaaagtatattaaatcaatagtgcacattgtcaaatagatcatct 1778191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 8437237 - 8437157
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagt-agaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||||||| ||||||||| |||||| | ||||||||||| ||| ||| | ||||||| |||||| |||| ||| |||||||    
T  8437237 gaatccaaaaacatcttatatgatattatttatctttgtatattagtaaaaaaaatatagtcaatgtatgttaggtcaata 8437157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 18013415 - 18013487
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||||||| |||||| | ||||||||||| ||| ||||||||||||   |||||||| |||| ||||| ||||    
T  18013415 acatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattatgtcaaaattg 18013487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 33462834 - 33462734
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| |||||||| ||| |||||| | ||||||||||| ||| ||||||||| || ||| ||||||  |||  |||| |||||| ||| |||||    
T  33462834 gagacgaatctaacaacattttatatgatattatttatctttgtatattagtagaaaagtatagttaaagtaagttagatcaaaattgtacatttttaaa 33462735  T
Q  109 t 109  Q
    |    
T  33462734 t 33462734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 34669737 - 34669677
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  34669737 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 34669677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 47340014 - 47340074
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||||||||| ||| |||||||| |||||| | ||||||||| | ||| ||||||||||||    
T  47340014 gagatgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 47340074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 52094024 - 52094084
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  52094024 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 52094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 37231684 - 37231597
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  37231684 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 37231597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 18795269 - 18795168
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| ||||||||||| | |||||||| |||    
T  18795269 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaaa 18795170  T
Q  109 ta 110  Q
    ||    
T  18795169 ta 18795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 44389415 - 44389306
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||| |||||| || ||||||||||||   ||||| ||| ||||||||||| |||||||||| |||    
T  44389415 gagacgaatccaacaacatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaa 44389316  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  44389315 tagatcatct 44389306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 48531454 - 48531563
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | ||||||||| |||||||||| ||     
T  48531454 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaac 48531553  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  48531554 taggtcatct 48531563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 35500868 - 35500781
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | ||||||||| || || |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  35500868 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgt 35500781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 36819828 - 36819923
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| || |||||||    
T  36819828 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgt 36819923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 47713631 - 47713536
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | ||||||||| ||||||||||    
T  47713631 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 47713536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 2400417 - 2400512
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  2400417 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgt 2400512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 10464236 - 10464149
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| |||||| | ||||||||| || || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  10464236 tccaacaacatcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 10464149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 36859337 - 36859242
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| || |||||| || |||||||    
T  36859337 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgt 36859242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 44479850 - 44479755
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  44479850 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 44479755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 47081112 - 47081207
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  47081112 gagacgaatccaacaacatcttacatgatattatttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 47081207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 46657765 - 46657871
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || | ||||||||||  ||||||| || ||||||||||| ||||| |||| |||    
T  46657765 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaaa 46657864  T
Q  109 tagatca 115  Q
    |||||||    
T  46657865 tagatca 46657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 21392150 - 21392245
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||| ||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | |||| |||| ||||||||||    
T  21392150 gagacgaatctaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgt 21392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 31466487 - 31466392
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  31466487 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 31466392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 31497827 - 31497737
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaata 110  Q
    ||||||||||||||||||||||||     |||||||||| || ||||||||||||  |||||| ||||||||||||||| |||||||||| |||||    
T  31497827 aatccaacaacatcttacatgata-----tatctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaaata 31497737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 32619071 - 32618976
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||||| ||||||||| || |||||||    
T  32619071 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgt 32618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 36643302 - 36643389
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| |||||| | |||||||||||| || ||| ||||||||  ||||||||||||||| |||||| ||||||||||    
T  36643302 tccaacaacatcttatatgatattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgt 36643389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 36905658 - 36905753
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| || ||||||||||| | ||||||||  ||||||||||    
T  36905658 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgt 36905753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 42834421 - 42834326
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| || |||||| || |||||||    
T  42834421 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgt 42834326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 31110762 - 31110852
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | |||||||||||| || |||| |||| || ||||||||||| | ||||||||  ||||||||||    
T  31110762 gaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgt 31110852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 47538055 - 47538164
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  ||||| |||| | ||||| ||| |||||||||| ||     
T  47538055 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaac 47538154  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  47538155 taggtcatct 47538164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 42086767 - 42086683
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||| ||||| |||||||||    
T  42086767 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaata 42086683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 4088770 - 4088857
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatatt 95  Q
    ||||| ||||| ||| |||||||| |||||| | ||||||||||| ||| | ||||||||||||||||||||| |||| |||||||||    
T  4088770 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacagtcaaagtaaattatgtcaatatt 4088857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 4612216 - 4612121
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||||| ||||||||||    
T  4612216 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 4612121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 23474093 - 23474003
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | |||||||||||  || ||||| ||| ||  |||||||||| | ||||||||| ||||||||||    
T  23474093 gaatccaacaacatcttacatgatattatttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgt 23474003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 28185527 - 28185445
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  28185527 caacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 28185445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 19072901 - 19072996
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||| ||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | || |||||| ||||||||||    
T  19072901 gagacgaatccagcaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 19072996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 37951074 - 37950979
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||   ||||| ||||| ||||||||| || |||||||    
T  37951074 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgt 37950979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 33613358 - 33613451
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcat 116  Q
    ||||||||||||||||| | ||||| |||||| || |||| |||||||  |||||| ||||||||||||||| ||||||| || ||||| |||||    
T  33613358 caacatcttacatgatattatttatttttgtgaattagtaaaaaaatatggtcaaa-tatattaagtcaataatgtatatggtcaaataaatcat 33613451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 34478130 - 34478042
Alignment:
Q  19 caacaacatcttacatgataatgtt---tatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||| | ||   |||||||||| || ||||||||||||  |||||||||| |||| |||||| ||||||||||    
T  34478130 caacaacatcttacatgatagtattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgt 34478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 38198613 - 38198673
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| |||||||||||||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  38198613 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 38198673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 42493646 - 42493563
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaat 92  Q
    |||| |||| ||||||| | |||||||||| | ||||||||||| ||| ||||||||||||  |||||||||| ||| ||||||    
T  42493646 gagacgaattcaacaacgttttacatgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaat 42493563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 35265756 - 35265826
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagt 79  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||||||||||| |||||||||    
T  35265756 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagt 35265826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 7460991 - 7461084
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||||||| |||||||| |||||| | ||||||||| | ||| |||  ||||||||||||||| |||||||  |||||| || |||||    
T  7460991 gagacgaatccaacgacatcttatatgatattatttatctttttatattagtgaaaaaatacagtcaaaatatattatatcaataatgaatatt 7461084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29770603 - 29770546
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaa 66  Q
    |||| ||||||||||||||||| ||||||| | |||||||||||| || |||||||||    
T  29770603 gagaagaatccaacaacatcttccatgatattatttatctttgtgaattagtagaaaa 29770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 31496580 - 31496669
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgta 98  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| | ||||||||||| |||||||||  ||| ||||| ||||||    
T  31496580 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaattgta 31496669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 38353533 - 38353642
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||||||||||| | ||||| || ||||  |||| ||| || ||| |||||    
T  38353533 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatataatcaaactaaattagatcaaaattataaatttttaaa 38353632  T
Q  109 tagatcatct 118  Q
    | ||||||||    
T  38353633 tggatcatct 38353642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 7314313 - 7314389
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||| ||| ||||||||||||  |||||||||| ||| ||||||| || | ||| | |||||||||||||    
T  7314313 tttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatagtgcaaattctcaaatagatcatct 7314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 16203812 - 16203916
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatgg 224  Q
    |||||||||  |||||||||||||||||| || || |   ||||||||||||    |  | |||||||||||||||||||||||||||||| | ||| ||    
T  16203812 agggtgaagaaaagtcacccttatataggagctcgcgttgataaccgtctccgtgtttcgtggcgtgtgattagggagcggttagaggacacgtgtaggg 16203911  T
Q  225 tgatc 229  Q
    |||||    
T  16203912 tgatc 16203916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 28016233 - 28016173
Alignment:
Q  20 aacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||||||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  28016233 aacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 28016173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 30462155 - 30462243
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    ||||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||| |||||||  |||||||||  ||||||||| ||||    
T  30462155 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaattg 30462243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 38498749 - 38498809
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||||||||||||||||||||||  ||||| | ||||| ||||| ||| ||||||||||||    
T  38498749 gagatgaatccaacaacatcttatttgatattatttatttttgtatattagtagaaaaata 38498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 9173271 - 9173342
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  9173271 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 9173342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 16204442 - 16204485
Alignment:
Q  186 ggcgtgtgattagggagcggttagaggacatgggtatggtgatc 229  Q
    |||||||||||||||||||||||||||||| | ||| |||||||    
T  16204442 ggcgtgtgattagggagcggttagaggacacgtgtagggtgatc 16204485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 16807081 - 16807152
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  16807081 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 16807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 38069180 - 38069109
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  38069180 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 38069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 39982234 - 39982159
Alignment:
Q  21 acaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||||||||||| |||||   ||||||||||| ||| ||||||||||| |||||||| |||  || ||||||||||    
T  39982234 acaacatcttacgtgatataatttatctttgtatattagtagaaaaatgcagtcaaaatatgctaggtcaatattg 39982159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 2450817 - 2450923
Alignment:
Q  9 gagatgaatccaacaacatcttacatgata-atgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    |||| ||||||||||||||||||||| |||  | |||||||||||| || | ||||||||||  || ||| ||| |||| | ||||  ||||||||||||    
T  2450817 gagacgaatccaacaacatcttacataatatttttttatctttgtgaattaatagaaaaatatggttaaaatatgttaaattaataaagtatattgttaa 2450916  T
Q  108 atagatc 114  Q
    | |||||    
T  2450917 agagatc 2450923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 3124081 - 3124151
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagt 79  Q
    |||| ||||| ||| |||| ||| |||||| | ||||| ||||| ||| ||||||||||||||||||||||    
T  3124081 gagacgaatctaacgacattttatatgatattatttatttttgtatattagtagaaaaatacagtcaaagt 3124151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 12004779 - 12004737
Alignment:
Q  127 ggtgaagctaagtcacccttatataggtgcgcgtgagaataac 169  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  12004779 ggtgaagctaagtcacccttatataggcgtgtgtgagaataac 12004737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23348480 - 23348398
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||||||||||||| ||| |||||  | ||||||||||| ||| |||| |||||||  |||||||||| |||  |||||||||    
T  23348480 gaatccaacaacattttatatgatgttatttatctttgtatattagtaaaaaaatatggtcaaagtatgttagttcaatattg 23348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 23734299 - 23734189
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtat-attaagtcaatattgtatattgttaa 107  Q
    |||| |||| |||| | |||||| |||||| | |||||||| || ||| |||||||||||| ||||||| |||  ||||||||||| || ||||| | ||    
T  23734299 gagacgaattcaacgatatcttatatgatattatttatcttcgtatattagtagaaaaatatagtcaaaatatgtttaagtcaatagtgcatattttcaa 23734200  T
Q  108 atagatcatct 118  Q
    ||| |||||||    
T  23734199 ataaatcatct 23734189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 14201509 - 14201585
Alignment:
Q  9 gagatgaatccaacaacatcttacatgat--aatgtttatctttgtgtataagtagaaaaatacagtcaaagtatat 83  Q
    |||| |||||||||||||||||| |||||  | | ||||||||||| ||| ||||||||||||  |||||| |||||    
T  14201509 gagacgaatccaacaacatcttatatgatgtattatttatctttgtatattagtagaaaaataatgtcaaaatatat 14201585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 26651150 - 26651215
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  26651150 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 26651215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 46074484 - 46074380
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagt--agaaaaatacagtcaaagtatattaagtcaatattgtatattgtt 105  Q
    |||| ||||||||||||||||||| |||||| | ||||||||| | ||| |||  | |||||||||||||| |||| | | ||||||| || | |||||     
T  46074484 tgaggtgaatccaacaacatcttatatgatattatttatctttatatattagtaaaaaaaaatacagtcaacgtatgtcaggtcaataatgcacattgtc 46074385  T
Q  106 aaata 110  Q
    |||||    
T  46074384 aaata 46074380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 2226735 - 2226775
Alignment:
Q  128 gtgaagctaagtcacccttatataggtgcgcgtgagaataa 168  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  2226735 gtgaagctaagtcacctttatataggtgtgcgtaagaataa 2226775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 9821231 - 9821311
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||||||||| |||||| | ||||||||| | ||| |||| |||||||   ||||||| ||| |||||| |||||||||||    
T  9821231 caacatcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaagtttatcaagtcagtattgtatatt 9821311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 10723156 - 10723236
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||||||||| |||||| | ||||||||| | ||| |||| |||||||   ||||||| ||| |||||| |||||||||||    
T  10723156 caacatcttatatgatattatttatctttatatattagtaaaaaaatatgatcaaagtttatcaagtcagtattgtatatt 10723236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 26190305 - 26190361
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatac 70  Q
    ||||||||| |||||||| |||| | | ||||||||||| ||| |||||||||||||    
T  26190305 gaatccaacgacatcttatatgaaattatttatctttgtatattagtagaaaaatac 26190361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 40348552 - 40348648
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||| ||| | | ||||| | || | ||||||||| || ||||||    
T  40348552 caacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattgttaaacaggtcatct 40348648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 20167706 - 20167597
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||| |||||| || ||||||||||||   ||||| ||| ||||||||||| |||||||||| |||    
T  20167706 gagacgaatccaacaacatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaaa 20167607  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  20167606 tagatcatct 20167597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 10658114 - 10658218
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||||||||||||||||||| ||| | ||||| |||||  || ||||||||||||  |||||||||| ||||||||||| |||||||||| ||||||||    
T  10658114 gaatccaacaacatcttacataatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaatagat 10658213  T
Q  114 catct 118  Q
    |||||    
T  10658214 catct 10658218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 18809416 - 18809503
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||| |||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  18809416 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 18809503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 43066258 - 43066353
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| ||||||||||    
T  43066258 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgt 43066353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 886198 - 886096
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||| |||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| |||||| |||| |||||||||| |||    
T  886198 gagacgaatccgacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaaa 886099  T
Q  109 tag 111  Q
    |||    
T  886098 tag 886096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 23248984 - 23249079
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  23248984 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 23249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 29791074 - 29791169
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  29791074 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 29791169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30290056 - 30290151
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  30290056 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 30290151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30380662 - 30380757
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  30380662 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 30380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 31127926 - 31127839
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || ||||||||||||   ||||||||||||||||||||| | ||||||||    
T  31127926 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgt 31127839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 13138261 - 13138168
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||| ||| | ||||||||| ||||||||    
T  13138261 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatatt 13138168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 13754848 - 13754952
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatgg 224  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||| |  | | |||||||||||||||| || ||||||||||| ||| | ||||    
T  13754848 agggtgaagctaagtcactcttatataggcacgcatgagaataaccgtcttcggattttgcggcgtgtgattagtgaacggttagaggaaatgtgaatgg 13754947  T
Q  225 tgatc 229  Q
    |||||    
T  13754948 tgatc 13754952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 14522517 - 14522620
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||||| ||||||||| |||||||||| || ||| |    
T  14522517 gaatccaacaacatcttacatgatattttttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggt 14522615  T
Q  114 catct 118  Q
    |||||    
T  14522616 catct 14522620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 44123815 - 44123911
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||  || ||||||| ||||||||| | |||||||||| |||||| ||||||    
T  44123815 caacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatct 44123911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 3293230 - 3293135
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | ||||||||| ||||||||||    
T  3293230 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 3293135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 6470977 - 6471086
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||   ||||||||| | ||||||||| |||||||||| ||     
T  6470977 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaac 6471076  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  6471077 taggtcatct 6471086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 3383542 - 3383649
Alignment:
Q  10 agatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaat 109  Q
    ||||||||||||||||||||| ||||||| | |||||||||||| || |||  |||||||   ||| ||||||||||||||||| | |||||||| ||||    
T  3383542 agatgaatccaacaacatctt-catgatattatttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaaat 3383640  T
Q  110 agatcatct 118  Q
    | |||||||    
T  3383641 atatcatct 3383649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 45253891 - 45253987
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | ||| |||||||| || ||||||||||||  |||||||||| | ||||||||| |||||||||| || ||| ||||||    
T  45253891 caacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatct 45253987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 1580894 - 1580799
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | || |||||| ||||||||||    
T  1580894 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgt 1580799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 2805605 - 2805522
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaat 92  Q
    |||| ||||||||||||||||||||||||| | ||| |||||||| || ||||||||| ||  |||||||||||| ||||||||    
T  2805605 gagacgaatccaacaacatcttacatgatattatttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaat 2805522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 8351009 - 8350914
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||| |  || | ||||||||||  |||||||||| | ||||||||| ||||||||||    
T  8351009 gagacgaatccaacaacatcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 8350914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 25256470 - 25256549
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    ||||||||||||||||||||||||| | |||||||||||  || ||||||||||||   ||||||||| |||||||||||    
T  25256470 gaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaata 25256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38845739 - 38845834
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| ||||||   |||||||||| | ||||||| | ||||||||||    
T  38845739 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgt 38845834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 45081944 - 45082039
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  ||| |||||||| || |||||| || |||||||    
T  45081944 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgt 45082039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 37710036 - 37710126
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||||| ||||||||||    
T  37710036 gaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 37710126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 6470743 - 6470634
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||| ||  |||||| ||| | || |||||| |||||||||| ||     
T  6470743 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaac 6470644  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  6470643 taggtcatct 6470634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 25173798 - 25173689
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||  ||||||  |||||||||||| ||| | |||||||| |  |||||| ||||||||||||||| || | ||||| |||    
T  25173798 gagacgaatccaacaacatcttgtatgatatcgtttatctttgtatattaatagaaaaacattgtcaaaatatattaagtcaatagtgcacattgtcaaa 25173699  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  25173698 taggtcatct 25173689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 2986457 - 2986552
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | || ||||||||  || ||||||||| ||  |||||| ||| | ||||||||| ||||||||||    
T  2986457 gagacgaatccaacaacatcttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgt 2986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 13765081 - 13765183
Alignment:
Q  127 ggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatggtg 226  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||| | |  | |||||  |||||||| ||| |||| |||| ||| | ||||||||    
T  13765081 ggtgaagctaagtcacccttaaataagcgcgcgtgagaataaccgtcttcgagttttgcggtctgtgattaaggaacggtaagagaacacgtgtatggtg 13765180  T
Q  227 atc 229  Q
    |||    
T  13765181 atc 13765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 13888572 - 13888646
Alignment:
Q  19 caacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| |||||||| |||||| | ||||||||||| ||| ||||||||||||| |||||||||| |||| ||||||    
T  13888572 caacgacatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtatgttaaatcaata 13888646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 12893674 - 12893767
Alignment:
Q  23 aacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcat 116  Q
    |||||||||||||||| | |||||||||||  ||   ||||||||||  |||||||||| ||||||||||| || ||||||| |||||| ||||    
T  12893674 aacatcttacatgatattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcat 12893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 1156515 - 1156619
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||||| |||||| |||||| | ||||| ||| | ||| |||||||||||||||||||||||| |||  |||||| | || ||| ||||||| ||    
T  1156515 gaatctaacaatatcttatatgatattatttatttttatatatcagtagaaaaatacagtcaaagtatgttagatcaataatataaatttttaaataaat 1156614  T
Q  114 catct 118  Q
    |||||    
T  1156615 catct 1156619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 11854656 - 11854736
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagt 88  Q
    ||||| || ||||||||||||||||| |||| | |||||||||||| || ||||||||||||  || || |||||||||||    
T  11854656 tgagacgattccaacaacatcttacaggatattatttatctttgtgaattagtagaaaaatatggttaaggtatattaagt 11854736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 14847346 - 14847434
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    ||||||||||| |||||| || ||| | |||||||||||| || ||||||||||||  |||||||||| | |||| |||| ||||||||    
T  14847346 gaatccaacaatatcttaaataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaataatgtatatt 14847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 38739789 - 38739884
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | || |||||| | ||||||||    
T  38739789 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgt 38739884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 39361257 - 39361352
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || | ||||||| ||   ||||||||||| || |||||| || |||||||    
T  39361257 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgt 39361352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 40013783 - 40013878
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||| |||||||||||||||||||| | ||||| |||||| || | || |||| ||  |||||||||| | ||||||||| ||||||||||    
T  40013783 gagacgaattcaacaacatcttacatgatattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 40013878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 8844662 - 8844712
Alignment:
Q  127 ggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctcca 177  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||||    
T  8844662 ggtgaagctaagtcacccttttataggtgtttgtgagaataaccgtctcca 8844712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 25118915 - 25118857
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaa 67  Q
    |||||||||||||| |||||||| |||||| | ||||||||||| ||| ||||||||||    
T  25118915 gagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaa 25118857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 7431251 - 7431352
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| |||||||||||| |||||| | ||||||||||| ||| |||||||||||   |||||| ||| |||  |||||| | || |||||||||    
T  7431251 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgttagatcaatagtatacattgttaaa 7431350  T
Q  109 ta 110  Q
    ||    
T  7431351 ta 7431352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 23764578 - 23764469
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||| |||||||||||||||||||| | ||| |||||||| || | ||||||||||   ||||| ||||| || | |||| |||||||||| ||     
T  23764578 gagacgaattcaacaacatcttacatgatattatttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaac 23764479  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  23764478 taggtcatct 23764469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 27301991 - 27301898
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| ||||  |||| |||| |||||    
T  27301991 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaagtaaattatatcaaaattgaatatt 27301898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 25009258 - 25009186
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| |||| ||||| ||||    
T  25009258 acatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattg 25009186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 42786030 - 42786090
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| |||||||||||||||||| |||||| | ||||||||||| ||| | ||||||||||    
T  42786030 gagacgaatccaacaacatcttatatgatattatttatctttgtatattaatagaaaaata 42786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 11988806 - 11988731
Alignment:
Q  43 ttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||||| ||| ||||||||| ||| |||||| ||| ||||||||||| |||| ||| | |||||| ||||||    
T  11988806 ttatctttgtatattagtagaaaactacggtcaaaatatgttaagtcaataatgtacattttcaaataggtcatct 11988731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 21132860 - 21132947
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||| ||||||| ||| ||||||||||||  |||||||||  ||||||||| ||||    
T  21132860 gagacgaatctaacgacatcttatatgatattatttttctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattg 21132947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 23248909 - 23248952
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgt 52  Q
    |||| ||||||||||||||||||||||||| | |||||||||||    
T  23248909 gagacgaatccaacaacatcttacatgatattatttatctttgt 23248952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 23437745 - 23437832
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||| | |||| ||||| ||||    
T  23437745 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagcaaattaggtcaaaattg 23437832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 30464561 - 30464490
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  30464561 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 30464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 761679 - 761597
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaa 91  Q
    |||| ||||| |||||||||||| |||||| | ||||  ||||| ||| ||||||||||||  ||||||||| |||| |||||    
T  761679 gagacgaatctaacaacatcttatatgatattatttaaatttgtatattagtagaaaaatatggtcaaagtaaattaggtcaa 761597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 4960281 - 4960171
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaa 107  Q
    ||||| ||||| ||| |||||||| |||||| | ||||||| ||| ||| ||||||||||||  |||||||||   || ||||| |||| | ||| | ||    
T  4960281 tgagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaa 4960182  T
Q  108 atagatcatct 118  Q
    |||||||||||    
T  4960181 atagatcatct 4960171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 14378623 - 14378689
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||| |||||||| |||||| | ||||||||| | ||| |||||||||||| ||||||||||    
T  14378623 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatagtcaaagta 14378689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 20671379 - 20671314
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| |||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  20671379 aatctaacaatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 25691535 - 25691600
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  25691535 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 25691600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 26628025 - 26627964
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaa 76  Q
    |||||||||| |||||| |||||| | ||||||||||| ||| | |||||||||| ||||||    
T  26628025 aatccaacaatatcttatatgatattatttatctttgtatattaatagaaaaatatagtcaa 26627964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 26916895 - 26916822
Alignment:
Q  129 tgaagctaagtcacccttatataggtgcgcgt-gagaataaccgtctccaaaatatgcggcgtgtgattaggga 201  Q
    |||||| | ||| |||||||||||| |||||| ||||||||||| |||||   | |||||||||||||||||||    
T  26916895 tgaagcaatgtcgcccttatataggcgcgcgttgagaataaccgcctccaggttttgcggcgtgtgattaggga 26916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 30653483 - 30653418
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  30653483 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 30653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 35584105 - 35584190
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    ||||| ||||| ||||| |||||| |||||| | ||||||||||| ||| | ||||||||||   ||||| ||||||| |||||||    
T  35584105 tgagacgaatctaacaatatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaaatatattaggtcaata 35584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 1645337 - 1645409
Alignment:
Q  8 tgagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||||| ||| | |||||| |||||| | ||||| ||||| ||| ||||||||||||| |||||||||    
T  1645337 tgagacgaatctaacgatatcttatatgatattatttatttttgtatattagtagaaaaatacggtcaaagta 1645409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 3466397 - 3466341
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||||||| |||||| | ||||||||||| ||| |||||||||||| | ||||||||    
T  3466397 acatcttatatgatattatttatctttgtatattagtagaaaaataaaatcaaagta 3466341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 5777486 - 5777546
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  5777486 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 29360901 - 29360977
Alignment:
Q  42 tttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||| | ||| ||||||||||||| ||||||| || ||| || |||| |||| ||| |||||||| ||||||    
T  29360901 tttatctttatatattagtagaaaaatacggtcaaagcatgttaggttaataatgtacatttttaaataggtcatct 29360977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 38036790 - 38036858
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaa 77  Q
    |||| ||||| |||||||||||| |||||  | ||||||||||| ||| ||| ||||||||| ||||||    
T  38036790 gagacgaatctaacaacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaa 38036858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 13207082 - 13206973
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  ||||||| || |||||||||||  ||||||||| |||    
T  13207082 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaa 13206983  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  13206982 taggtcatct 13206973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 20662188 - 20662093
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  20662188 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 20662093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 25163304 - 25163391
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||| |||||| |||||| | |||||||||||| || ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  25163304 tccaacaatatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgt 25163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 33121674 - 33121781
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | ||||||||| || || ||||||||||||  ||||||||| || ||||||||| | |||||||| |||    
T  33121674 gagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaaa 33121773  T
Q  109 tagatcat 116  Q
     |||||||    
T  33121774 cagatcat 33121781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 34572995 - 34572892
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatgg 224  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||| | ||||||  ||||||| ||||||||||||||| | |||||||||| | ||| ||    
T  34572995 agggtgaagttaagtcacccttatataggcgcgtgtgagaataatcatctccatgatatgcgacgtgtgattagggagtgattagaggacacgtgtaggg 34572896  T
Q  225 tgat 228  Q
    ||||    
T  34572895 tgat 34572892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 16696138 - 16696036
Alignment:
Q  16 atccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatca 115  Q
    ||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| | ||||||||  |||||||||| || ||| |||    
T  16696138 atccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtca 16696039  T
Q  116 tct 118  Q
    |||    
T  16696038 tct 16696036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 31709005 - 31708913
Alignment:
Q  26 atcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||| |||||| | ||||||||||| ||| ||||||||||||| ||||||||| |||||||||| |||| | ||| |||||||||||||||    
T  31709005 atcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtaaattaagtcaaaattgcacatttttaaatagatcatct 31708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 8796181 - 8796276
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||| ||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| ||||||||||| ||||||||||    
T  8796181 gagacgaatccaacaatatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgt 8796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 18992035 - 18992130
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  18992035 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 18992130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 24150873 - 24150968
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || | ||||||| ||  |||||||||||| ||||||||| || |||||||    
T  24150873 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 24150968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30237299 - 30237394
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||| || ||||||||| ||| |||||||||||||| || ||||||||||||  |||||||||| | ||||||||| ||||||||||    
T  30237299 gagacgaatccaataatatcttacattatattgtttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 30237394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 29986287 - 29986213
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatat 83  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  ||||||||||||    
T  29986287 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatat 29986213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 19068894 - 19068791
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatc 114  Q
    |||| ||||||||||||||||||| |  || |||||||| || ||||||||||||  |||||||||| |||| |||||| || || |||| |||||||||    
T  19068894 aatctaacaacatcttacatgatattacttctctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatc 19068795  T
Q  115 atct 118  Q
    ||||    
T  19068794 atct 19068791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 25435543 - 25435638
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||||||| | || |||||| ||||||||||    
T  25435543 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgt 25435638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 4890070 - 4890174
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| |||| ||||| |||| | ||| |||||| |||    
T  4890070 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggat 4890169  T
Q  114 catct 118  Q
    |||||    
T  4890170 catct 4890174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 643560 - 643465
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||  | |||| |||| ||  |||||||||| | ||||||||  ||||||||||    
T  643560 gagacgaatccaacaacatcttacatgatattatttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgt 643465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 7098002 - 7097907
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||| ||||||||||||||| | ||||||||| || || |||| |||| ||  |||||||||| ||||||||||| | ||||||||    
T  7098002 gagacgaatccaactacatcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgt 7097907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 11114697 - 11114792
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  |||||| ||| | || |||||| ||||||||||    
T  11114697 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgt 11114792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 22020408 - 22020503
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   || ||||||| | ||||||||| ||||||||||    
T  22020408 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgt 22020503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 24693267 - 24693193
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatat 83  Q
    ||||||||||||| ||||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||| |||||    
T  24693267 gagatgaatccaaaaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatat 24693193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 32541416 - 32541509
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| |||| ||||| |||| |||||    
T  32541416 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatatt 32541509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 19788707 - 19788647
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||||||||||||||||||||||| | ||||| ||||| ||| ||||||||||||    
T  19788707 gagacgaatccaacaacatcttacatgatattatttatatttgtatattagtagaaaaata 19788647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 22692182 - 22692230
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtc 173  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  22692182 agggtgaagctaagtcacctttatataggtgtgtgtgagaataaccgtc 22692230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 995692 - 995621
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||||||||||| ||||||||||    
T  995692 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagta 995621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 2397899 - 2397812
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  ||||||||| |||| ||||| ||||    
T  2397899 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattg 2397812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 2656609 - 2656680
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||||||||||| ||||||||||    
T  2656609 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagta 2656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 2667264 - 2667335
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||||||||||| ||||||||||    
T  2667264 gagacgaatctaacgacatcttatatgatattatttatctttgtttattagtagaaaaatatagtcaaagta 2667335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 11087606 - 11087696
Alignment:
Q  139 tcacccttatataggtgcgcg-tgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatggtgatc 229  Q
    ||||||||||||||||||||| |||| ||||| ||||||  | |||||||||||| |||| ||| ||||||||||||| | ||| |||||||    
T  11087606 tcacccttatataggtgcgcgttgagcataactgtctccggattatgcggcgtgtaattaagga-cggttagaggacacgtgtagggtgatc 11087696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 31854950 - 31855045
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || | || |||| |   |||||||||| | |||||||||  |||||||||    
T  31854950 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgt 31855045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 9022969 - 9022876
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||| ||| |||||||| |||||| | ||||| ||||| ||| ||||||||||||  |||||||||| ||| ||||| |||| |||||    
T  9022969 gagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatatt 9022876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 34187398 - 34187487
Alignment:
Q  139 tcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatggtgat 228  Q
    |||||||||||||||    |||||||||||||||||||   |||||| ||||||||||||||| |  |||||||||| | | ||||||||    
T  34187398 tcacccttatataggcatacgtgagaataaccgtctccgggatatgcagcgtgtgattagggatcaattagaggacacgtgcatggtgat 34187487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 14268582 - 14268625
Alignment:
Q  186 ggcgtgtgattagggagcggttagaggacatgggtatggtgatc 229  Q
    |||||||||||||||||||||||||||||| | ||| |||||||    
T  14268582 ggcgtgtgattagggagcggttagaggacacgtgtaaggtgatc 14268625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 16969507 - 16969420
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattg 96  Q
    |||| ||||| ||| |||| ||| |||||| | ||||| ||||| ||| ||||||||||||  ||||||||| |||||||||| ||||    
T  16969507 gagacgaatctaacgacattttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaattaagtcaaaattg 16969420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 24825294 - 24825223
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  24825294 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 24825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 30699390 - 30699319
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  30699390 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 30699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 10109365 - 10109459
Alignment:
Q  24 acatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||| || ||| | ||||| ||||| ||| |||||||||||| ||||||||||  ||| ||||| |||| | ||| |||||| ||||||||    
T  10109365 acatcttatataatattatttatttttgtatattagtagaaaaataaagtcaaagtaagttaggtcaaaattgcacatttttaaatggatcatct 10109459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 24798490 - 24798556
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  24798490 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 24798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 2141697 - 2141608
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgta 98  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||   ||||||||  ||| ||||| ||||||    
T  2141697 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgta 2141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 16661547 - 16661612
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||| |||||||| |||||| | ||||||||| | ||| ||||||||||||| |||||||||    
T  16661547 aatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatacggtcaaagta 16661612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 17179337 - 17179428
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    |||| ||||||||| |||||||| || ||| | ||||||||||| ||| ||||| |||||||||||||| ||| ||  ||||||| ||||||||    
T  17179337 gagacgaatccaacgacatcttatataatattatttatctttgtatattagtag-aaaatacagtcaaaatatgtt-tgtcaatagtgtatatt 17179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 6142446 - 6142506
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  6142446 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 6142506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 15104280 - 15104236
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcgtgagaataacc 170  Q
    ||||||||||||| |||||||||||||| | | ||||||||||||    
T  15104280 gggtgaagctaagccacccttatataggcgtgtgtgagaataacc 15104236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 15480339 - 15480311
Alignment:
Q  128 gtgaagctaagtcacccttatataggtgc 156  Q
    |||||||||||||||||||||||||||||    
T  15480339 gtgaagctaagtcacccttatataggtgc 15480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 16434672 - 16434600
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtat 81  Q
    |||| |||| ||||||||| ||| |||||| | ||||||||||| ||| ||| ||||||||  ||||||||||    
T  16434672 gagacgaattcaacaacattttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtat 16434600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 19762400 - 19762340
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||||||||| ||||||||||||| | ||||| ||||| ||| |||| |||||||    
T  19762400 gagacgaatccaacaaaatcttacatgatattatttatatttgtatattagtaaaaaaata 19762340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 29514965 - 29515025
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  29514965 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 29515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 20517550 - 20517645
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| ||||||||| || |||||||    
T  20517550 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgt 20517645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 39418149 - 39418054
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||||||||||  ||||||||||| | ||||||||| ||||||||||    
T  39418149 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgt 39418054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 4083339 - 4083449
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||| || |||||||||| | ||||||||||||  | ||||||||||||  |||||||||| | ||||||||| |||||||||| |||    
T  4083339 gagacgaatccaacaatattttacatgatattatttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaaa 4083438  T
Q  109 tagatcatctt 119  Q
    |||||||||||    
T  4083439 tagatcatctt 4083449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 45258153 - 45258063
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    |||||||||| ||||||||||||||||||| | |||||  |||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  45258153 agggtgaagcaaagtcacccttatataggtcctcgtgacgataaccgtctccgagttttgcggcgtgtgattagggagcggttagaggaca 45258063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 43925198 - 43925101
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatag 111  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||   ||||||||| ||||||||||| |||||||| | ||||||    
T  43925198 gaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaatag 43925101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 332419 - 332515
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||||||| | |||||||||||| || |||| ||||||| | ||||||||| ||||||||||| |||||||||| |||||||| ||||    
T  332419 caacatcttacatgatattatttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaaatagattatct 332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 3987361 - 3987266
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| |||| |||| || |||||||    
T  3987361 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgt 3987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 7443020 - 7442913
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| |||||||||| ||     
T  7443020 gagacgaatccaacaacatcttacatgatattttttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaac 7442921  T
Q  109 tagatcat 116  Q
    ||||||||    
T  7442920 tagatcat 7442913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30708860 - 30708955
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||||||  |||||| ||||| ||||||||| ||||||||||    
T  30708860 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgt 30708955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 36199080 - 36198985
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||| |||||||||||| || |||||| || |||||||    
T  36199080 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgt 36198985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 44283408 - 44283313
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  44283408 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 44283313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 9877212 - 9877103
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || |||| |||||||  |||||||||| | ||||||||| |||||||||| ||     
T  9877212 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaat 9877113  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  9877112 taggtcatct 9877103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 13399234 - 13399125
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||| ||||||||||| | |||||||||||  || ||||||||||||  || |||| || ||||||||||| |||||||||| ||     
T  13399234 gagacgaatccaacaacagcttacatgatattatttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaac 13399135  T
Q  109 tagatcatct 118  Q
    ||||||||||    
T  13399134 tagatcatct 13399125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 18734054 - 18733945
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||||||||||||||||| | | |||||||| || ||| |||||||||||||| ||||| ||| ||||||||||||| || ||||| |||    
T  18734054 gagacgaatcaaacaacatcttacatgaaattttttatcttcgtatattagtagaaaaatacaatcaaaatatgttaagtcaatattatacattgtcaaa 18733955  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  18733954 taggtcatct 18733945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 1110429 - 1110517
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatatt 102  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| |||| |||||| ||| ||||    
T  1110429 gaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtttatt 1110517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 24283084 - 24282980
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    ||||||||||||||||||||||||| | |||||||||||| || |||| ||||||| ||||||| ||| | || |||||| | |||||||| || |||||    
T  24283084 gaatccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagat 24282985  T
Q  114 catct 118  Q
    |||||    
T  24282984 catct 24282980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 18718371 - 18718466
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||   ||||||||||| ||||||||| || |||||||    
T  18718371 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 18718466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 38137654 - 38137579
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtca 90  Q
    |||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||| ||||||||    
T  38137654 aatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtca 38137579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 40598269 - 40598356
Alignment:
Q  17 tccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||||||||||||||||||||| | |||||||||||| || | ||||||||||  ||||||||||||||| | |||| ||||||||||    
T  40598269 tccaacaacatcttacatgatattatttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgt 40598356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 42038655 - 42038750
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  42038655 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 42038750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 45715087 - 45715175
Alignment:
Q  127 ggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggaca 215  Q
    |||||||||||||||||||| |||| |  |||||||||||||| |||||  | ||||| ||||||||||||| |||| |||||||||||    
T  45715087 ggtgaagctaagtcacccttgtataagcacgcgtgagaataactgtctctgagatatgtggcgtgtgattagagagcagttagaggaca 45715175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 14372209 - 14372304
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||||||| || | ||||| |||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  14372209 gagacgaatccaacaacatcttacatgttattatttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 14372304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 14707663 - 14707569
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  ||||||||| || ||||||||| || |||||||    
T  14707663 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagta-tgtcaaagtacatcaagtcaataatgcatattgt 14707569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 23671508 - 23671603
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| |||||||||||||||||| |||||| | |||||||||||| || ||||||||| ||  |||||||||||  ||||||||| || |||||||    
T  23671508 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgt 23671603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 40425378 - 40425283
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||| | || ||||||||| ||  |||||||||||| || |||||| || |||||||    
T  40425378 gagacgaatccaacaacatcttacatgatattatttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgt 40425283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 41172886 - 41172779
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||||||||||||||   |||||||||||| || | ||||||| ||   ||||||||||| ||||||||| || ||||||| ||     
T  41172886 gagacgaatccaacaacatcttacatgatatcatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaac 41172787  T
Q  109 tagatcat 116  Q
    ||||||||    
T  41172786 tagatcat 41172779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 41463646 - 41463539
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || |||||||||||   || ||||||| | || |||||| |||||||||| ||     
T  41463646 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaac 41463547  T
Q  109 tagatcat 116  Q
    ||||||||    
T  41463546 tagatcat 41463539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 42020333 - 42020230
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtc-aaagtatattaagtcaatattgtatattgttaa 107  Q
    |||| ||||||||||||||||||||||||| | ||||| |||||| || ||||||| ||||  ||| ||||||| |||| |||||| |||||||||| ||    
T  42020333 gagacgaatccaacaacatcttacatgatattatttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaa 42020234  T
Q  108 atag 111  Q
    ||||    
T  42020233 atag 42020230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 7106415 - 7106521
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagat 113  Q
    |||||||||||||| |||||||||| | |||||||||||| || ||||||||||||   | | ||||| |||| |||||||||| | |||| ||| ||||    
T  7106415 gaatccaacaacattttacatgatattatttatctttgtgaattagtagaaaaatatgattagagtatgttaactcaatattgttttttgtcaaagagat 7106514  T
Q  114 catctta 120  Q
    |||||||    
T  7106515 catctta 7106521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 12209118 - 12209047
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||||||||||||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  12209118 gagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 12209047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 16941940 - 16941845
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||| ||| | || ||||||||| || ||||||||| ||   ||||||||||| ||||||||| || |||||||    
T  16941940 gagacgaatccaacaacatcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 16941845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 17012605 - 17012510
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||| ||| | || ||||||||| || ||||||||| ||   ||||||||||| ||||||||| || |||||||    
T  17012605 gagacgaatccaacaacatcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgt 17012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 27559707 - 27559802
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||| | ||||||||||    
T  27559707 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgt 27559802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 34827044 - 34827139
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   |||||||||| | ||||||||| | ||||||||    
T  34827044 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgt 34827139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 44330516 - 44330611
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || |||| |||| |   || ||||||| | ||||||||| ||||||||||    
T  44330516 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgt 44330611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 38963651 - 38963760
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||||| ||||||||| ||| | |||||||||||| || ||||||||||||   ||||||||  | ||||||||| | |||||||| ||     
T  38963651 gagacgaatccaacaatatcttacataatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaag 38963750  T
Q  109 tagatcatct 118  Q
     |||||||||    
T  38963751 cagatcatct 38963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 4045982 - 4046040
Alignment:
Q  9 gagatgaatccaacaacatcttacatgata-atgtttatctttgtgtataagtagaaaa 66  Q
    |||| ||||||||||||||||||||||||| || |||||||||||| || |||||||||    
T  4045982 gagacgaatccaacaacatcttacatgatatatttttatctttgtgaattagtagaaaa 4046040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 32776019 - 32775937
Alignment:
Q  22 caacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||| ||||||| | ||| |||| ||| || ||||||||||||  |||||||||| | ||||||||| ||||||||||    
T  32776019 caacatctttcatgatattatttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgt 32775937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 25762323 - 25762214
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||  |||||||| |||||| | ||||||||||| ||| | ||||||||||  ||| |||||||||| ||||||| || | ||| | |||    
T  25762323 gagacgaatccaatgacatcttatatgatattatttatctttgtatattaatagaaaaatagggtcgaagtatattaggtcaatagtgcacattttcaaa 25762224  T
Q  109 tagatcatct 118  Q
     |||||||||    
T  25762223 cagatcatct 25762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 4045362 - 4045262
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| |||||||||||||| |||||||||| | |||||||||||  || |||| ||||||   |||||| ||| | ||||||| | |||||||||| |||    
T  4045362 gagacgaatccaacaacattttacatgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaa 4045263  T
Q  109 t 109  Q
    |    
T  4045262 t 4045262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 43409417 - 43409501
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| ||||||||||| |||||  |||||| | ||||||||||| ||| | ||||||||||  |||||||||||| | |||||||    
T  43409417 gagacgaatccaacaatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaata 43409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 7724545 - 7724616
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  7724545 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 7724616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 8373563 - 8373492
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  8373563 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 8373492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 38963924 - 38963853
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  38963924 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 38963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 41436961 - 41436890
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  41436961 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 41436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 27668087 - 27668005
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaa 91  Q
    |||| |||||||||||||| ||| |||||| | ||||||||||  ||| | ||||||||||  |||||||||| | |||||||    
T  27668087 gagacgaatccaacaacattttatatgatattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaa 27668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 2831830 - 2831765
Alignment:
Q  15 aatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||| ||||||||||||||| | ||||| ||||| ||| ||||||||||||  |||||||||    
T  2831830 aatctaacgacatcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagta 2831765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 15177498 - 15177389
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| |||| |||||||  |||||||||  |||| | || |||||| ||| | |||    
T  15177498 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaaattaaaattgtacattttcaaa 15177399  T
Q  109 tagatcatct 118  Q
    ||| ||||||    
T  15177398 taggtcatct 15177389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 17626990 - 17627039
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctc 175  Q
    |||||||||||||||||||||| ||||| | |  ||||||||||||||||    
T  17626990 gggtgaagctaagtcacccttaaataggcgtgtatgagaataaccgtctc 17627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 17658050 - 17658099
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctc 175  Q
    |||||||||||||||||||||| ||||| | |  ||||||||||||||||    
T  17658050 gggtgaagctaagtcacccttaaataggcgtgtatgagaataaccgtctc 17658099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 17672062 - 17672111
Alignment:
Q  126 gggtgaagctaagtcacccttatataggtgcgcgtgagaataaccgtctc 175  Q
    |||||||||||||||||||||| ||||| | |  ||||||||||||||||    
T  17672062 gggtgaagctaagtcacccttaaataggcgtgtatgagaataaccgtctc 17672111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 25766573 - 25766464
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaa 108  Q
    |||| ||||||||  |||||||| |||||| | ||||||||||| ||| | || |||||||  ||| |||||||||| ||||||| || | ||| | |||    
T  25766573 gagacgaatccaatgacatcttatatgatattatttatctttgtatattaataaaaaaatatggtcgaagtatattaggtcaatagtgcacattttcaaa 25766474  T
Q  109 tagatcatct 118  Q
     |||||||||    
T  25766473 cagatcatct 25766464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 4137538 - 4137478
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  4137538 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 4137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 10333512 - 10333572
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  10333512 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 10333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 45036492 - 45036432
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  45036492 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 45036432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 12884 - 12979
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  12884 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 12979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 10525 - 10620
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  10525 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 10620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 14191 - 14286
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||||| ||  |||||||||| | ||||||||| ||||||||||    
T  14191 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgt 14286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 44237 - 44142
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||  |||||||||||| ||||||||| || |||||||    
T  44237 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgt 44142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 117453 - 117537
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaata 93  Q
    |||| |||| |||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||||| |||||||||    
T  117453 gagacgaattcaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaata 117537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1253 - 1317
Alignment:
Q  16 atccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    ||||||||||||||||||||||| | |||||||||||| || ||||||||||||  |||||||||    
T  1253 atccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagta 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 15345 - 15250
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    |||| ||||||||||||||||||||||||| | |||||||||||  || ||||||  | ||  |||||||||| | ||||||||| ||||||||||    
T  15345 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgt 15250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 41341 - 41251
Alignment:
Q  14 gaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgt 104  Q
    ||||||||||||||||||||||||| | |||||||||||| || |||| |||| ||  || ||||||| | |||||||||  |||||||||    
T  41341 gaatccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgt 41251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 14507 - 14579
Alignment:
Q  46 tctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    |||||||| || |||||||||||| ||||||||||||| || |||||| |||||||||| || ||| ||||||    
T  14507 tctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtcatct 14579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 24170 - 24244
Alignment:
Q  44 tatctttgtgtataagtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||| ||| ||||||||||||| |||||| ||| ||||||||||| || | ||| |||||||| ||||||    
T  24170 tatctttgtatattagtagaaaaatacggtcaaaatatgttaagtcaatagtgcacatttttaaataggtcatct 24244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 18468 - 18426
Alignment:
Q  129 tgaagctaagtcacccttatataggtgcgcgtgagaataaccg 171  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  18468 tgaagctaagtcacccttatataggtgtgtgtgagaataaccg 18426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 45256 - 45196
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| |||||| ||||||| ||| |||||| | ||||||||||| ||||||||||||||||    
T  45256 gagacgaatcctacaacatgttatatgatattatttatctttgtatataagtagaaaaata 45196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 5505 - 5434
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  5505 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 184095 - 184024
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaatacagtcaaagta 80  Q
    |||| ||||| ||| |||||||| |||||| | ||||||||||| ||| ||||||||||||  |||||||||    
T  184095 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 184024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 14012 - 14116
Alignment:
Q  125 agggtgaagctaagtcacccttatataggtgcgc-gtgagaataaccgtctccaaaatatgcggcgtgtgattagggagcggttagaggacatgggtatg 223  Q
    |||||||||| |  ||||||||||||||||| ||  || ||||||||| |||||   | ||||| ||||||||||||| | ||||||||||| | |||||    
T  14012 agggtgaagcaagatcacccttatataggtgtgcattgggaataaccgcctccaggttttgcggtgtgtgattaggga-ccgttagaggacacgcgtatg 14110  T
Q  224 gtgatc 229  Q
    ||||||    
T  14111 gtgatc 14116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 145696 - 145638
Alignment:
Q  9 gagatgaatccaacaacatcttacatgataatgtttatctttgtgtataagtagaaaaata 69  Q
    |||| ||||||||||||||||||  ||||| | ||||||||||| ||| ||||||||||||    
T  145696 gagacgaatccaacaacatctta--tgatattatttatctttgtatattagtagaaaaata 145638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 38312 - 38252
Alignment:
Q  58 agtagaaaaatacagtcaaagtatattaagtcaatattgtatattgttaaatagatcatct 118  Q
    ||||||||||||  |||||||||| |||| |||| | |||||||||| |||||| ||||||    
T  38312 agtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaaataggtcatct 38252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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