View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0683_low_2 (Length: 633)

Name: NF0683_low_2
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0683_low_2
NF0683_low_2
[»] chr8 (38 HSPs)
chr8 (9-348)||(28391208-28391547)
chr8 (349-606)||(37430076-37430341)
chr8 (352-547)||(13534609-13534809)
chr8 (352-547)||(13624149-13624349)
chr8 (349-543)||(45475801-45476001)
chr8 (349-547)||(2952137-2952344)
chr8 (349-543)||(23606548-23606748)
chr8 (347-547)||(30883309-30883517)
chr8 (349-547)||(41879161-41879364)
chr8 (349-543)||(23798179-23798380)
chr8 (349-547)||(3048435-3048640)
chr8 (349-543)||(10917375-10917575)
chr8 (349-543)||(42600766-42600967)
chr8 (125-290)||(28411795-28411960)
chr8 (360-547)||(5860671-5860867)
chr8 (125-256)||(28383150-28383281)
chr8 (347-420)||(20003726-20003799)
chr8 (530-606)||(20003839-20003916)
chr8 (438-528)||(15167423-15167519)
chr8 (438-528)||(8646205-8646300)
chr8 (364-528)||(41677106-41677278)
chr8 (438-528)||(39332413-39332509)
chr8 (369-487)||(5973046-5973164)
chr8 (438-528)||(8102911-8103007)
chr8 (438-528)||(11290183-11290279)
chr8 (370-494)||(30674343-30674467)
chr8 (567-606)||(2952473-2952512)
chr8 (567-606)||(3048774-3048813)
chr8 (567-606)||(5860996-5861035)
chr8 (452-528)||(5942695-5942777)
chr8 (567-606)||(30883136-30883175)
chr8 (438-528)||(7944530-7944626)
chr8 (438-472)||(9108554-9108588)
chr8 (430-521)||(34789862-34789959)
chr8 (438-472)||(34868185-34868219)
chr8 (349-394)||(33963268-33963313)
chr8 (438-494)||(23941099-23941155)
chr8 (438-486)||(34048713-34048761)
[»] chr1 (41 HSPs)
chr1 (349-606)||(14146231-14146495)
chr1 (366-606)||(41697072-41697319)
chr1 (349-606)||(6771722-6771989)
chr1 (355-606)||(16139986-16140244)
chr1 (349-606)||(3406349-3406614)
chr1 (349-606)||(3440206-3440471)
chr1 (349-547)||(44655732-44655936)
chr1 (352-544)||(50881424-50881621)
chr1 (349-543)||(23185422-23185622)
chr1 (349-543)||(4971536-4971736)
chr1 (349-547)||(5316671-5316875)
chr1 (349-543)||(5027544-5027746)
chr1 (349-543)||(17168951-17169151)
chr1 (349-543)||(19955712-19955912)
chr1 (348-543)||(9172939-9173141)
chr1 (348-543)||(9180921-9181123)
chr1 (348-495)||(6889660-6889806)
chr1 (348-495)||(6891506-6891652)
chr1 (349-543)||(40501707-40501908)
chr1 (349-547)||(27906646-27906839)
chr1 (348-543)||(1366796-1366996)
chr1 (352-543)||(13913401-13913600)
chr1 (349-472)||(22865378-22865502)
chr1 (349-494)||(21740852-21741000)
chr1 (349-543)||(51607358-51607558)
chr1 (438-540)||(27559635-27559743)
chr1 (512-606)||(6888495-6888590)
chr1 (355-420)||(34247151-34247216)
chr1 (438-492)||(17322630-17322684)
chr1 (444-528)||(26803958-26804045)
chr1 (438-528)||(38547043-38547139)
chr1 (496-543)||(44895647-44895694)
chr1 (349-408)||(52127460-52127519)
chr1 (438-528)||(45758504-45758600)
chr1 (567-606)||(27906949-27906988)
chr1 (567-606)||(44655565-44655604)
chr1 (439-521)||(38853539-38853627)
chr1 (438-527)||(33170770-33170865)
chr1 (365-417)||(44895775-44895827)
chr1 (438-495)||(6221727-6221783)
chr1 (566-606)||(10912094-10912134)
[»] chr5 (41 HSPs)
chr5 (348-606)||(15480005-15480269)
chr5 (349-606)||(36187795-36188059)
chr5 (347-606)||(19523119-19523386)
chr5 (354-551)||(2274866-2275070)
chr5 (349-544)||(27078994-27079197)
chr5 (349-543)||(38869279-38869479)
chr5 (348-543)||(16198708-16198910)
chr5 (357-547)||(34756289-34756486)
chr5 (349-547)||(16591990-16592194)
chr5 (346-492)||(31194525-31194671)
chr5 (349-526)||(22986473-22986657)
chr5 (352-544)||(30854312-30854511)
chr5 (349-543)||(9364275-9364476)
chr5 (350-543)||(28822253-28822458)
chr5 (349-543)||(16799240-16799443)
chr5 (349-543)||(27924066-27924267)
chr5 (357-543)||(40389461-40389652)
chr5 (349-543)||(7670908-7671118)
chr5 (363-494)||(7338038-7338170)
chr5 (349-495)||(31881348-31881496)
chr5 (393-526)||(23284022-23284161)
chr5 (348-420)||(23283942-23284014)
chr5 (438-528)||(2412087-2412183)
chr5 (438-528)||(2530902-2530998)
chr5 (438-528)||(14318390-14318486)
chr5 (438-524)||(36868881-36868973)
chr5 (348-494)||(26718864-26719010)
chr5 (348-494)||(26988608-26988754)
chr5 (438-528)||(1366531-1366627)
chr5 (438-487)||(22648741-22648790)
chr5 (438-530)||(10407458-10407556)
chr5 (567-606)||(34756615-34756654)
chr5 (573-606)||(31881597-31881630)
chr5 (438-487)||(33037826-33037875)
chr5 (438-486)||(24395786-24395834)
chr5 (438-472)||(606215-606249)
chr5 (572-606)||(22987473-22987507)
chr5 (438-487)||(2024647-2024696)
chr5 (441-474)||(22875001-22875034)
chr5 (573-606)||(30853292-30853325)
chr5 (438-487)||(34425949-34425998)
[»] chr4 (63 HSPs)
chr4 (353-606)||(1105457-1105717)
chr4 (349-606)||(5128758-5129023)
chr4 (349-606)||(37514584-37514848)
chr4 (349-570)||(32915346-32915575)
chr4 (348-543)||(34027568-34027769)
chr4 (353-547)||(47128972-47129172)
chr4 (349-538)||(54780771-54780968)
chr4 (348-547)||(34768491-34768696)
chr4 (349-547)||(10978885-10979092)
chr4 (363-539)||(43455463-43455645)
chr4 (348-535)||(2790658-2790851)
chr4 (349-543)||(32128573-32128774)
chr4 (361-547)||(38209520-38209713)
chr4 (349-547)||(48209225-48209436)
chr4 (349-543)||(16845010-16845210)
chr4 (349-547)||(10428116-10428327)
chr4 (349-543)||(19498493-19498691)
chr4 (349-494)||(17679444-17679589)
chr4 (349-543)||(37777140-37777341)
chr4 (352-543)||(35779248-35779443)
chr4 (349-543)||(54083160-54083360)
chr4 (349-547)||(55255254-55255447)
chr4 (345-488)||(16922241-16922386)
chr4 (349-543)||(40089505-40089714)
chr4 (439-547)||(13460192-13460306)
chr4 (360-543)||(35465096-35465284)
chr4 (349-543)||(16882313-16882513)
chr4 (355-543)||(38352189-38352373)
chr4 (352-494)||(51964752-51964897)
chr4 (349-484)||(23508427-23508564)
chr4 (349-495)||(9578575-9578729)
chr4 (349-419)||(24969716-24969786)
chr4 (430-494)||(51691914-51691978)
chr4 (496-547)||(23509869-23509920)
chr4 (496-543)||(24969426-24969473)
chr4 (438-528)||(27112034-27112130)
chr4 (438-528)||(36118465-36118561)
chr4 (438-494)||(39655261-39655317)
chr4 (349-408)||(980336-980395)
chr4 (349-404)||(13460305-13460360)
chr4 (364-528)||(52468290-52468459)
chr4 (441-495)||(2135331-2135385)
chr4 (438-520)||(36178684-36178772)
chr4 (566-606)||(10431442-10431482)
chr4 (567-606)||(38209842-38209881)
chr4 (567-606)||(55255106-55255145)
chr4 (572-606)||(9579475-9579509)
chr4 (572-606)||(9585170-9585204)
chr4 (450-528)||(4167910-4167994)
chr4 (566-606)||(17679243-17679283)
chr4 (443-495)||(40217275-40217327)
chr4 (566-606)||(45560704-45560744)
chr4 (566-606)||(47128007-47128047)
chr4 (566-606)||(48208476-48208516)
chr4 (566-605)||(34769533-34769572)
chr4 (438-472)||(24614019-24614053)
chr4 (446-488)||(36362886-36362928)
chr4 (439-472)||(15735156-15735189)
chr4 (438-471)||(30507129-30507162)
chr4 (438-487)||(39329399-39329448)
chr4 (365-417)||(2975358-2975410)
chr4 (566-606)||(13459810-13459850)
chr4 (566-606)||(27596639-27596679)
[»] chr7 (36 HSPs)
chr7 (347-606)||(12596205-12596469)
chr7 (348-547)||(29077200-29077405)
chr7 (430-605)||(10955405-10955587)
chr7 (352-547)||(8171460-8171661)
chr7 (348-543)||(18776682-18776884)
chr7 (349-543)||(23550988-23551189)
chr7 (349-543)||(20091197-20091399)
chr7 (349-543)||(10329327-10329528)
chr7 (349-543)||(24525599-24525803)
chr7 (349-543)||(48983756-48983962)
chr7 (349-494)||(26254032-26254178)
chr7 (351-543)||(8239669-8239869)
chr7 (348-543)||(19692078-19692280)
chr7 (349-522)||(28749715-28749895)
chr7 (349-543)||(38414793-38414994)
chr7 (349-543)||(47984885-47985088)
chr7 (349-420)||(25010540-25010611)
chr7 (350-494)||(33162257-33162402)
chr7 (355-420)||(40357303-40357368)
chr7 (439-494)||(21763595-21763650)
chr7 (438-528)||(2611269-2611365)
chr7 (438-528)||(36891577-36891673)
chr7 (496-543)||(25010417-25010464)
chr7 (438-528)||(23859072-23859168)
chr7 (443-523)||(9021812-9021898)
chr7 (349-415)||(10955605-10955671)
chr7 (438-495)||(6765688-6765745)
chr7 (349-472)||(12419413-12419536)
chr7 (566-606)||(28749607-28749647)
chr7 (567-606)||(18777019-18777058)
chr7 (438-489)||(20153245-20153296)
chr7 (438-487)||(27237430-27237479)
chr7 (438-494)||(23744835-23744891)
chr7 (438-528)||(12981325-12981421)
chr7 (438-487)||(36902931-36902980)
chr7 (438-486)||(9014185-9014233)
[»] chr3 (45 HSPs)
chr3 (348-606)||(47467607-47467873)
chr3 (348-606)||(21582694-21582961)
chr3 (352-606)||(53149235-53149497)
chr3 (349-606)||(42098724-42098989)
chr3 (349-543)||(43207157-43207356)
chr3 (349-548)||(8073257-8073461)
chr3 (349-547)||(38681011-38681216)
chr3 (349-547)||(54619121-54619326)
chr3 (350-547)||(3953816-3954019)
chr3 (353-543)||(44708464-44708660)
chr3 (349-547)||(27078486-27078692)
chr3 (349-547)||(27084283-27084489)
chr3 (349-547)||(36715942-36716148)
chr3 (361-547)||(18372462-18372658)
chr3 (349-543)||(34290554-34290755)
chr3 (349-494)||(50258542-50258687)
chr3 (349-543)||(50939152-50939352)
chr3 (353-543)||(37168354-37168551)
chr3 (348-543)||(53506801-53507003)
chr3 (349-543)||(54407073-54407276)
chr3 (352-494)||(36606006-36606149)
chr3 (348-411)||(29620363-29620426)
chr3 (349-420)||(48720429-48720500)
chr3 (386-543)||(9878643-9878806)
chr3 (355-469)||(48157196-48157310)
chr3 (441-494)||(23641329-23641382)
chr3 (438-494)||(32319163-32319219)
chr3 (496-547)||(29620460-29620511)
chr3 (549-606)||(50258716-50258774)
chr3 (438-528)||(54574835-54574931)
chr3 (566-606)||(13795213-13795253)
chr3 (567-606)||(27078819-27078858)
chr3 (567-606)||(27084616-27084655)
chr3 (567-606)||(36605872-36605911)
chr3 (567-606)||(36716276-36716315)
chr3 (567-606)||(38681348-38681387)
chr3 (567-606)||(54619454-54619493)
chr3 (438-488)||(26279590-26279640)
chr3 (438-528)||(42453413-42453502)
chr3 (573-606)||(3954859-3954892)
chr3 (438-487)||(8420375-8420424)
chr3 (496-543)||(48157126-48157173)
chr3 (572-606)||(1148360-1148394)
chr3 (438-487)||(25855471-25855519)
chr3 (438-487)||(49393138-49393187)
[»] chr6 (30 HSPs)
chr6 (349-606)||(30832443-30832707)
chr6 (349-606)||(24710914-24711182)
chr6 (348-547)||(13727316-13727522)
chr6 (349-543)||(27788608-27788807)
chr6 (349-547)||(21280528-21280733)
chr6 (349-547)||(21479477-21479683)
chr6 (350-547)||(33774100-33774305)
chr6 (349-543)||(17353941-17354142)
chr6 (349-547)||(19737612-19737815)
chr6 (349-537)||(20711638-20711833)
chr6 (349-494)||(27314097-27314243)
chr6 (363-543)||(28075770-28075960)
chr6 (353-543)||(34397844-34398039)
chr6 (351-522)||(1155767-1155947)
chr6 (357-543)||(235151-235344)
chr6 (438-495)||(6159479-6159536)
chr6 (441-528)||(21183686-21183779)
chr6 (438-528)||(2477592-2477688)
chr6 (355-475)||(19987212-19987330)
chr6 (438-528)||(20611792-20611888)
chr6 (566-606)||(23070889-23070929)
chr6 (572-606)||(21280359-21280393)
chr6 (573-606)||(19741230-19741263)
chr6 (566-606)||(12083640-12083680)
chr6 (567-606)||(13727650-13727689)
chr6 (567-606)||(21479310-21479349)
chr6 (575-606)||(27314773-27314804)
chr6 (575-606)||(27579084-27579115)
chr6 (438-495)||(30121803-30121860)
chr6 (567-603)||(33773928-33773964)
[»] chr2 (38 HSPs)
chr2 (349-606)||(7162703-7162967)
chr2 (349-606)||(3952925-3953188)
chr2 (349-547)||(4505873-4506078)
chr2 (352-547)||(6964986-6965186)
chr2 (349-543)||(29939781-29939981)
chr2 (349-547)||(12337365-12337571)
chr2 (349-547)||(3155196-3155401)
chr2 (353-494)||(40636176-40636317)
chr2 (347-547)||(8906994-8907202)
chr2 (349-543)||(27506659-27506859)
chr2 (352-542)||(10762488-10762683)
chr2 (348-543)||(9046012-9046214)
chr2 (349-543)||(24410419-24410623)
chr2 (349-543)||(26716111-26716313)
chr2 (352-494)||(34694013-34694155)
chr2 (352-494)||(34716425-34716567)
chr2 (355-494)||(5952642-5952779)
chr2 (348-461)||(1396616-1396730)
chr2 (349-469)||(8327681-8327801)
chr2 (438-528)||(38400796-38400892)
chr2 (438-526)||(21665708-21665802)
chr2 (438-528)||(16097006-16097102)
chr2 (438-528)||(28425718-28425814)
chr2 (567-606)||(3155029-3155068)
chr2 (567-606)||(6964818-6964857)
chr2 (364-470)||(22727391-22727497)
chr2 (438-495)||(7742141-7742199)
chr2 (441-487)||(16227379-16227425)
chr2 (438-528)||(12134048-12134144)
chr2 (438-524)||(24035553-24035645)
chr2 (438-486)||(11952596-11952643)
chr2 (566-606)||(12337689-12337729)
chr2 (438-494)||(13800552-13800608)
chr2 (567-606)||(4505705-4505744)
chr2 (567-606)||(34693173-34693212)
chr2 (567-606)||(34715585-34715624)
chr2 (572-606)||(40635988-40636022)
chr2 (496-528)||(37182668-37182700)
[»] scaffold0070 (2 HSPs)
scaffold0070 (349-547)||(1323-1527)
scaffold0070 (573-606)||(1037-1070)
[»] scaffold0039 (1 HSPs)
scaffold0039 (349-543)||(106522-106723)
[»] scaffold0001 (2 HSPs)
scaffold0001 (348-487)||(183106-183245)
scaffold0001 (496-594)||(181851-181950)
[»] scaffold1590 (1 HSPs)
scaffold1590 (438-528)||(266-362)
[»] scaffold0097 (1 HSPs)
scaffold0097 (438-528)||(38924-39020)
[»] scaffold0012 (1 HSPs)
scaffold0012 (438-528)||(206497-206593)
[»] scaffold0182 (1 HSPs)
scaffold0182 (441-494)||(24004-24057)
[»] scaffold0018 (1 HSPs)
scaffold0018 (438-528)||(173518-173614)
[»] scaffold0227 (1 HSPs)
scaffold0227 (438-472)||(16126-16160)


Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 348
Target Start/End: Complemental strand, 28391547 - 28391208
Alignment:
Q  9 gaataatatccagaatcaccacttctgaaaatgtacctgaacatatacataaattttgtttcatgcaccattagtaagcttatatattgaaattgttaca 108  Q
    |||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  28391547 gaataaaatccagaatcaccacttctgaaaatgtacctgcatatatacataaattttgtttcatgcaccattggtaagcttatatattgaaattgtaaca 28391448  T
Q  109 accaaaagacattcaaaatccaccttatatctatgtttatggggacatttttgccactcatggaatgtgtccataatcttgaaaatgaaacctccaccat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28391447 accaaaagacattcaaaatccaccttatatctatgtttatggggacatttttgccactcatggaatgtgtccataatcttgaaaatgaaacctccaccat 28391348  T
Q  209 attctcatcagctgcaataactgaaaaatttgtcccatggattctgcagtatgattacaactgtaaattagtctattgaatatacaattaggtgctggaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28391347 attctcatcagctgcaataactgaaaaatttgtcccatggattctgcagtatgattacaactgtaaattagtctattgaatatacaattaggtgctggaa 28391248  T
Q  309 tcgtgcttttgtttgataaaaacaattgtatgattacacc 348  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28391247 tcgtgcttttgtttgataaaaacaattgtatgattacacc 28391208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 37430076 - 37430341
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatt 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatt 37430175  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  |||||||||||| ||||       || ||||||||||||||||||||||||||||  ||| |||||||||    
T  37430176 tatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccctcacgtaacaccaa 37430275  T
Q  542 aatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  37430276 aatcaatcatgaggaacccccactcttgaggcccatccttaaggaaggcccaactcgtttgagctg 37430341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 352 - 547
Target Start/End: Original strand, 13534609 - 13534809
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata 13534708  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatc 545  Q
    ||||||||||||||||||| ||||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13534709 ttttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatc 13534807  T
Q  546 aa 547  Q
    ||    
T  13534808 aa 13534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 352 - 547
Target Start/End: Original strand, 13624149 - 13624349
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata 13624248  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatc 545  Q
    ||||||||||||||||||| ||||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13624249 ttttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatc 13624347  T
Q  546 aa 547  Q
    ||    
T  13624348 aa 13624349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 45476001 - 45475801
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||    
T  45476001 cagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 45475902  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  45475901 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 45475802  T
Q  543 a 543  Q
    |    
T  45475801 a 45475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 2952137 - 2952344
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta---nnnnnnnnnaaagagcgatgttcta 445  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||            ||||||| ||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttcta 2952236  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||      |  |||||||||||||||||||||||||||||| ||||||||||||    
T  2952237 tttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacacc 2952336  T
Q  540 aaaatcaa 547  Q
    ||||||||    
T  2952337 aaaatcaa 2952344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 23606548 - 23606748
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||         ||||||| |||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 23606647  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  ||||||||||||||||      | || |||||||||||||||||||||||||||| |||||||||||||||    
T  23606648 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 23606747  T
Q  543 a 543  Q
    |    
T  23606748 a 23606748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 347 - 547
Target Start/End: Complemental strand, 30883517 - 30883309
Alignment:
Q  347 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttct 444  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||           ||||||| |||||||    
T  30883517 cccaaggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttct 30883418  T
Q  445 atttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||    
T  30883417 atttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 30883318  T
Q  539 caaaatcaa 547  Q
    |||||||||    
T  30883317 caaaatcaa 30883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 41879364 - 41879161
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||||         ||||| | |||||||||||    
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgta-tttttttaaaagaacaatgttctattt 41879266  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||      |||||||||||||||| ||||||||| |||| |||||||||||||||    
T  41879265 atattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacaccaaa 41879166  T
Q  543 atcaa 547  Q
    |||||    
T  41879165 atcaa 41879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 23798179 - 23798380
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||          ||||||| ||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctatt 23798278  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23798279 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23798378  T
Q  542 aa 543  Q
    ||    
T  23798379 aa 23798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 3048435 - 3048640
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| || | |||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatt 3048534  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||      |  ||||||||||||||||||||| ||||||||  |||||||||||||    
T  3048535 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacaccaa 3048634  T
Q  542 aatcaa 547  Q
    ||||||    
T  3048635 aatcaa 3048640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 10917575 - 10917375
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||| |||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||| | | ||| |||||||    
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctattt 10917476  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  10917475 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaacaccaaa 10917376  T
Q  543 a 543  Q
    |    
T  10917375 a 10917375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 42600967 - 42600766
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg-tannnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |          ||| ||| ||| ||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatt 42600868  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  |||||||||| |||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  42600867 tatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 42600768  T
Q  542 aa 543  Q
    ||    
T  42600767 aa 42600766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 28411795 - 28411960
Alignment:
Q  125 aatccaccttatatctatgtttatggggacatttttgccactcatggaatgtgtccataatcttgaaaatgaaacctccaccatattctcatcagctgca 224  Q
    ||||||||| ||||| ||||||||||| |||| | ||||| ||||||||  ||||||| ||||| ||||||||||||||||||||||||||| |||| |     
T  28411795 aatccacctgatatcgatgtttatgggaacatctatgccagtcatggaagatgtccatgatcttaaaaatgaaacctccaccatattctcattagctact 28411894  T
Q  225 ataactgaaaaatttgtcccatggattctgcagtatgattacaactgtaaattagtctattgaata 290  Q
    ||||||||||| ||||||||||||||||||||  ||| || ||| || ||||||||||||| ||||    
T  28411895 ataactgaaaattttgtcccatggattctgcaacatggtttcaattgaaaattagtctattcaata 28411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 547
Target Start/End: Original strand, 5860671 - 5860867
Alignment:
Q  360 ctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn---aaagagcgatgttctatttatattttt 456  Q
    ||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||| ||            ||||||| |||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  457 taaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    |||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaacaccaaaatcaa 5860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 28383281 - 28383150
Alignment:
Q  125 aatccaccttatatctatgtttatggggacatttttgccactcatggaatgtgtccataatcttgaaaatgaaacctccaccatattctcatcagctgca 224  Q
    |||||||||| | ||||||||||| ||||||| |||||||||||| |||  ||||||| ||||| ||||||||||||||||||||||||||||||||||     
T  28383281 aatccaccttttgtctatgtttatagggacatctttgccactcattgaagatgtccatgatcttaaaaatgaaacctccaccatattctcatcagctgct 28383182  T
Q  225 ataactgaaaaatttgtcccatggattctgca 256  Q
    ||||| ||||| ||||| || | |||||||||    
T  28383181 ataaccgaaaagtttgttccttcgattctgca 28383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 20003726 - 20003799
Alignment:
Q  347 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20003726 cccagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgta 20003799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 530 - 606
Target Start/End: Original strand, 20003839 - 20003916
Alignment:
Q  530 acctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  20003839 acctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 20003916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 15167423 - 15167519
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| ||||||||||||||||||| ||||| | ||||||||||| |||      |||||||||| |||| |||||||||||||||||||    
T  15167423 atgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctc 15167519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 8646300 - 8646205
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgc-----ggtacatgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||      | | |||||||||| |||||||||||||| || ||||||    
T  8646300 atgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgcatacacgcaaatgtgaaaatcactaccgtatacataagaaacctc 8646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 364 - 528
Target Start/End: Original strand, 41677106 - 41677278
Alignment:
Q  364 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatttatatttt-ttaaaa 461  Q
    ||||||||||||||||||||| || ||||||||| ||  | ||||||| ||||||||         ||| || | |||||||||||| ||||| ||||||    
T  41677106 gaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttaaaa 41677205  T
Q  462 gataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||  | ||||||||||||| |||||      |||||||| ||||| ||||||||||||||||||    
T  41677206 gataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctc 41677278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 39332413 - 39332509
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||||||  ||||| ||||||||||||||| || || |||||| |||||||||      |||||||| ||||||||||||||||||||||||    
T  39332413 atgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 39332509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 487
Target Start/End: Original strand, 5973046 - 5973164
Alignment:
Q  369 cggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaagataaat 468  Q
    |||||||| |||||||  |||||||||||| | || ||||||| |||| |||         ||||| | |||||||||||| ||||||||||||||||||    
T  5973046 cggaggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaattttttaaaagataaat 5973145  T
Q  469 acaaagtatcgtatatatg 487  Q
    |||| || |||||||||||    
T  5973146 acaaggtgtcgtatatatg 5973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 8103007 - 8102911
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||| |||||| |||||||||||||||||||||| ||   |||||||||||||||      | |||||||| | ||||||||||||||||||||||    
T  8103007 atgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctc 8102911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 11290279 - 11290183
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||| |||||| |||||||||||||||||||||| || |||||||||||  ||||      | |||||||| ||||||||||||||||| ||||||    
T  11290279 atgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctc 11290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 370 - 494
Target Start/End: Original strand, 30674343 - 30674467
Alignment:
Q  370 ggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaagataaata 469  Q
    |||||||||||||||  | |||||||||||  || ||||||| ||||||||         ||||| | |||||||||||| || ||||||||||||||||    
T  30674343 ggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaatgttttaaaagataaata 30674442  T
Q  470 caaagtatcgtatatatgcggtaca 494  Q
     || || ||||||||||||| ||||    
T  30674443 taaggtgtcgtatatatgcgataca 30674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 2952473 - 2952512
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctg 2952512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 3048774 - 3048813
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctg 3048813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 5860996 - 5861035
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctg 5861035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 5942777 - 5942695
Alignment:
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||||||||||||  | |||||||| |||||||||       |||||||| ||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctc 5942695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 30883175 - 30883136
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30883175 tgaggcccatccttgagggaggcccagctcgtttgagctg 30883136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 7944530 - 7944626
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||| |||||| ||||||||||| |||||||||| ||  ||||||||||  |||||       |||||||| ||||||||||||||||||||||||    
T  7944530 atgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctc 7944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 9108588 - 9108554
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaa 472  Q
    |||||||||||| ||||||||||||||||||||||    
T  9108588 atgttctatttaaattttttaaaagataaatacaa 9108554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 521
Target Start/End: Original strand, 34789862 - 34789959
Alignment:
Q  430 aaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgag 521  Q
    ||||| |||||||||||||| || | |||||||||||||||||  | |||||||||||  ||||      | |||||||| |||||||||||||||||    
T  34789862 aaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 34868185 - 34868219
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaa 472  Q
    |||||||||||| ||||||||||||||||||||||    
T  34868185 atgttctatttaaattttttaaaagataaatacaa 34868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 33963268 - 33963313
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaa 394  Q
    ||||||||| | ||||||||||||||||||||| || |||||||||    
T  33963268 cagggccgttcatgagaattcggaggctcggctttgagaatgaaaa 33963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 494
Target Start/End: Original strand, 23941099 - 23941155
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||| |||||| |||||||||||||||||||||| || || |||||| ||| ||||    
T  23941099 atgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgataca 23941155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 34048713 - 34048761
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatat 486  Q
    |||||||||||| |  ||||||||||||||||||| || ||||||||||    
T  34048713 atgttctatttaaacattttaaaagataaatacaatgtgtcgtatatat 34048761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 2e-91; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 14146495 - 14146231
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||    
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcgatgttctattt 14146396  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatg------tgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||||||||    
T  14146395 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 14146296  T
Q  543 atcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    || |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14146295 attaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 14146231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 366 - 606
Target Start/End: Original strand, 41697072 - 41697319
Alignment:
Q  366 attcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaagata 465  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatattttttaaaagata 41697171  T
Q  466 aatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-c 558  Q
    ||||||||||||||||||||||| ||||||      ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  41697172 aatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacc 41697271  T
Q  559 cccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  41697272 cccactcttgatgcccatccttgagggaggcccagctcgtttgagctg 41697319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 6771989 - 6771722
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn---aaagagcgatgttcta 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttcta 6771890  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||    
T  6771889 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacacc 6771790  T
Q  540 aaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6771789 aaaatcaatcatgaggaacccccactcttgaggcccatccttaagggaggcccagctcgtttgagctg 6771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 355 - 606
Target Start/End: Complemental strand, 16140244 - 16139986
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattt 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||         |||||| ||||||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatattt 16140145  T
Q  455 tttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaat 548  Q
    |||||||||||||||||| || | ||||||||||||||||       ||||||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  16140144 tttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaacactaaaatcaat 16140045  T
Q  549 catgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  16140044 catgaggaacccccacgcttgagacccatccttgagggaggcccaactcgtttgagctg 16139986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 3406614 - 3406349
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatt 447  Q
    |||||| ||||||||||||| |||||||| |||| ||||||||||||||| |||||||||||| |||||||          ||| |||||||||||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatt 3406515  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||| |||||       ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3406514 tatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3406415  T
Q  542 aatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3406414 aatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttgagctg 3406349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 3440206 - 3440471
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatt 447  Q
    |||||| ||||||||||||| |||||||| |||| ||||||||||||||| |||||||||||| |||||||          ||| |||||||||||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatt 3440305  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||| |||||       ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3440306 tatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3440405  T
Q  542 aatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3440406 aatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttgagctg 3440471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 44655936 - 44655732
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||         ||||||| |||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataatttttttaaaagagcaatgttctattt 44655837  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| || |||||||||||||||||      | || |||||||||||||||||||||||||||| |||||||||||||||    
T  44655836 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 44655737  T
Q  543 atcaa 547  Q
    |||||    
T  44655736 atcaa 44655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 352 - 544
Target Start/End: Complemental strand, 50881621 - 50881424
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||         ||||||| ||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatcta-tttttttaaaagagcaatgttctatttata 50881523  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaat 544  Q
    ||||||||||||||||||||| || |||||||||||||||||||      |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50881522 ttttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaaat 50881424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 23185622 - 23185422
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||         ||||||| |||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 23185523  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23185522 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 23185423  T
Q  543 a 543  Q
    |    
T  23185422 a 23185422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 4971536 - 4971736
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||| |||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||| ||         ||||||| |||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatatttttttttaaagagcaatgttctattt 4971635  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4971636 atattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 4971735  T
Q  543 a 543  Q
    |    
T  4971736 a 4971736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 5316875 - 5316671
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||||||||||| ||||||||| |  | |||||||||||||| |||||||||||||||||||||         ||||||| |||||||||||    
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 5316776  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5316775 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 5316676  T
Q  543 atcaa 547  Q
    |||||    
T  5316675 atcaa 5316671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 5027746 - 5027544
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||           ||||||| |||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 5027647  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||| |||| |||||||||| |||||||||||||    
T  5027646 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacacca 5027547  T
Q  541 aaa 543  Q
    |||    
T  5027546 aaa 5027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 17169151 - 17168951
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||         ||| ||| |||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctattt 17169052  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || || | |||||||||||||||      | ||||||||||||||| ||||||||||||||| | |||||||||||||    
T  17169051 atattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaacaccaaa 17168952  T
Q  543 a 543  Q
    |    
T  17168951 a 17168951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 19955912 - 19955712
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |         ||| ||| ||| |||||||    
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaaagcaatgatctattt 19955813  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||      | |||||||||||||||||||| |||||||||| |||||||||||||||    
T  19955812 atattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaa 19955713  T
Q  543 a 543  Q
    |    
T  19955712 a 19955712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 9172939 - 9173141
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||          ||| | | |||||||||    
T  9172939 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctat 9173038  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||||||      ||||||||||||||||||||||||||||||| |||||||||||||    
T  9173039 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 9173138  T
Q  541 aaa 543  Q
    |||    
T  9173139 aaa 9173141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 9180921 - 9181123
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||          ||| | | |||||||||    
T  9180921 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctat 9181020  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||||||      ||||||||||||||||||||||||||||||| |||||||||||||    
T  9181021 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 9181120  T
Q  541 aaa 543  Q
    |||    
T  9181121 aaa 9181123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 348 - 495
Target Start/End: Complemental strand, 6889806 - 6889660
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||| ||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||         ||||||| ||||||||||    
T  6889806 ccagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttta-aaagagcaatgttctatt 6889708  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6889707 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 6889660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 348 - 495
Target Start/End: Complemental strand, 6891652 - 6891506
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||| ||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||         ||||||| ||||||||||    
T  6891652 ccagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttta-aaagagcaatgttctatt 6891554  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6891553 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 6891506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 40501707 - 40501908
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||          ||| ||  ||| ||||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatctatt 40501806  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || || |||||||||||||||||      | || |||||||||||||||||||||| ||||||||||||||||||||    
T  40501807 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaacaccaa 40501906  T
Q  542 aa 543  Q
    ||    
T  40501907 aa 40501908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 27906646 - 27906839
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |         ||||||| |||||| |||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 27906745  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacatgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    ||||||||||||||||||||||||| ||  ||     |  |   | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27906746 tatattttttaaaagataaatacaaggtgccg---ccaccc---agaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 27906839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 1366796 - 1366996
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||| ||  ||||| |||||||| ||||||||||||||||||||||||||||||| | ||||| ||         || |||| ||||||||||    
T  1366796 ccagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatatttttttttaa-gagcaatgttctatt 1366894  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      |  ||||||||||||||||||||| |||||||| ||||||||||||||    
T  1366895 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacaccaa 1366994  T
Q  542 aa 543  Q
    ||    
T  1366995 aa 1366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 352 - 543
Target Start/End: Original strand, 13913401 - 13913600
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| |||         ||| ||| ||| ||||||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaaagcaatgatctatttata 13913500  T
Q  452 ttttttaaaagataaatacaaagtatc--gtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||||||||||| ||  |  |  |||||||||||||||      | |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13913501 ttttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaa 13913600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 349 - 472
Target Start/End: Original strand, 22865378 - 22865502
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||          ||||||| ||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctatt 22865477  T
Q  448 tatattttttaaaagataaatacaa 472  Q
    |||||||||||||||||||||||||    
T  22865478 tatattttttaaaagataaatacaa 22865502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 494
Target Start/End: Original strand, 21740852 - 21741000
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta---nnnnnnnnnaaagagcgatgttcta 445  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||            ||||||| ||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttcta 21740951  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||| ||||||||||||||||||||||| ||  |||||||||||| ||||    
T  21740952 tttgtattttttaaaagataaatacaaggtgccgtatatatgcgataca 21741000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 51607358 - 51607558
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||         ||| |   ||||| |||||    
T  51607358 caggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaa-aaaaatgttttattt 51607456  T
Q  449 atattttttaaaagataaatacaaagt-atcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||| || ||   ||||||||||||||||      | ||||||||||||||||||||||||||||||  ||| |||| |||||    
T  51607457 atattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaataccaa 51607556  T
Q  542 aa 543  Q
    ||    
T  51607557 aa 51607558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 438 - 540
Target Start/End: Complemental strand, 27559743 - 27559635
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccac 531  Q
    |||||||||||||||||||||||||||||||| || || |||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||    
T  27559743 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 27559644  T
Q  532 ctaacacca 540  Q
    |||||||||    
T  27559643 ctaacacca 27559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 512 - 606
Target Start/End: Complemental strand, 6888590 - 6888495
Alignment:
Q  512 tatacatgaggaacctccacctaacaccaaaatcaatcatgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||| |||||||| || | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  6888590 tatacacgaggaacccccgcttaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagctg 6888495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 34247216 - 34247151
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacgta 34247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 438 - 492
Target Start/End: Original strand, 17322630 - 17322684
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggta 492  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  17322630 atgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 26804045 - 26803958
Alignment:
Q  444 tatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac---atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||| ||||||||||||||||||||||  | ||||||||||||| |||   | |||||||| ||||||||||||||||| ||||||    
T  26804045 tatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacacaaggtgaaaatcactaccgtatacatgagaaacctc 26803958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 38547043 - 38547139
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||| |||||      |||||||||| |||| | |||||||||||||||||    
T  38547043 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctc 38547139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 44895694 - 44895647
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  44895694 gtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaa 44895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 52127460 - 52127519
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataa 408  Q
    |||| |||||||||||||||||||||||||||||||||| | ||| |||||| |||||||    
T  52127460 caggaccgtccctgagaattcggaggctcggctctgggattaaaaggaggccggtgataa 52127519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 45758600 - 45758504
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||| ||| || | |||||||||   |||||      |||||||| ||||||||||||||||||||||||    
T  45758600 atgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 45758504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 27906949 - 27906988
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctg 27906988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 44655604 - 44655565
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctg 44655565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 521
Target Start/End: Complemental strand, 38853627 - 38853539
Alignment:
Q  439 tgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgag 521  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||  ||| ||      |||||||| |||||||||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 527
Target Start/End: Complemental strand, 33170865 - 33170770
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacct 527  Q
    ||||| |||||| |||||||||||  ||||||||| || | ||||||||||||||||       |||||||| ||||||||||||||||| |||||    
T  33170865 atgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacct 33170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 44895827 - 44895775
Alignment:
Q  365 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac 417  Q
    |||||||||| |||| |||||||||||||||||| | |||| |||||||||||    
T  44895827 aattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaac 44895775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 495
Target Start/End: Complemental strand, 6221783 - 6221727
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    |||||||||||| |||||| ||||||||||||||| ||  |||||||| |||||||||    
T  6221783 atgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacat 6221727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 10912094 - 10912134
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| ||||||||||  |||||||||||||||||||||||    
T  10912094 ttgaggcccatccttggaggaggcccagctcgtttgagctg 10912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 4e-89; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 348 - 606
Target Start/End: Original strand, 15480005 - 15480269
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||         ||||| ||||||||||||    
T  15480005 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttt-aaagaccgatgttctatt 15480103  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||       ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15480104 tatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaa 15480203  T
Q  542 aatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15480204 aatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 15480269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 36187795 - 36188059
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||    
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttttttttttaaaagagcgatgttctattt 36187894  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||| |||||||||| ||  |||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||||    
T  36187895 atattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaaa 36187994  T
Q  543 atcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    || |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  36187995 attaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagctg 36188059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 347 - 606
Target Start/End: Complemental strand, 19523386 - 19523119
Alignment:
Q  347 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn-aaagagcgatgttcta 445  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           |||||||| |||||||    
T  19523386 cccagagccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgttttttttttaaagagcggtgttcta 19523287  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||       ||||||||||||||| ||||||||||||||| ||||||||||||    
T  19523286 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacacc 19523187  T
Q  540 aaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19523186 aaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 19523119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 354 - 551
Target Start/End: Complemental strand, 2275070 - 2274866
Alignment:
Q  354 ccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatttatat 452  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatat 2274971  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatca 546  Q
    |||||||||||||||||||| ||||||||||||||| ||||      | |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  2274970 tttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaatca 2274871  T
Q  547 atcat 551  Q
    |||||    
T  2274870 atcat 2274866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 349 - 544
Target Start/End: Complemental strand, 27079197 - 27078994
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||| |||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 27079098  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | |||||||||||||| |||||||||||||||| |||||||||||||    
T  27079097 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacacca 27078998  T
Q  541 aaat 544  Q
    ||||    
T  27078997 aaat 27078994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 38869279 - 38869479
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||         ||||||| |||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctattt 38869378  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || || |||||||||||||||||      | |||||||||||||||||||||||||| |||| |||||||||||||||    
T  38869379 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaa 38869478  T
Q  543 a 543  Q
    |    
T  38869479 a 38869479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 16198708 - 16198910
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||| |||||||||    
T  16198708 ccagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctat 16198807  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||||||||||||||| || || ||||||||||||| |||      | ||||||||||||||||||||||||||||||| |||||||||||||    
T  16198808 ttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 16198907  T
Q  541 aaa 543  Q
    |||    
T  16198908 aaa 16198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 357 - 547
Target Start/End: Original strand, 34756289 - 34756486
Alignment:
Q  357 tccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatttatatttt 455  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| ||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttt 34756388  T
Q  456 ttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    ||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  34756389 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaaatcaa 34756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 16591990 - 16592194
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||         ||||||| |||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatattttttttaaaagagcaatgttctattt 16592089  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||| |||||||||||||||  || |||||||||||||||||      | |||||||||||||||||||| |||||||||| |||||||||||||||    
T  16592090 atattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaa 16592189  T
Q  543 atcaa 547  Q
    |||||    
T  16592190 atcaa 16592194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 346 - 492
Target Start/End: Original strand, 31194525 - 31194671
Alignment:
Q  346 acccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttcta 445  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||         ||||||| ||||||||    
T  31194525 acccagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtatttcttttaaaagagcaatgttcta 31194624  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggta 492  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||    
T  31194625 tttatattttttaaaagataaatacaaggtgccgtatatatgcggta 31194671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 349 - 526
Target Start/End: Original strand, 22986473 - 22986657
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |         ||||||| ||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctatt 22986572  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacc 526  Q
     ||||||||||||||| ||||||||||| |||||||||||||||||      | |||||||||||||||||||||||||| ||||    
T  22986573 aatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 352 - 544
Target Start/End: Complemental strand, 30854511 - 30854312
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatttat 450  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||| ||||||||         ||| |||| |||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttat 30854412  T
Q  451 attttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaat 544  Q
    |||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  30854411 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaaat 30854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 9364476 - 9364275
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||           || ||| ||||||||||    
T  9364476 cagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaagcaatgttctatt 9364377  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||| |||    
T  9364376 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacatcaa 9364277  T
Q  542 aa 543  Q
    ||    
T  9364276 aa 9364275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 350 - 543
Target Start/End: Original strand, 28822253 - 28822458
Alignment:
Q  350 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta------nnnnnnnnnaaagagcgatgttc 443  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||               ||||||| ||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  444 tatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaaca 537  Q
    |||||||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||| ||||| ||||||||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaaca 28822452  T
Q  538 ccaaaa 543  Q
    ||||||    
T  28822453 ccaaaa 28822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 16799240 - 16799443
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcg---atgttcta 445  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||          || || |   ||||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattttttttttaaaagagtaaatgttcta 16799339  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    |||||||||||||||| ||||||| || ||  ||||||||||||||||      | |||||||||| |||||||||||||||||||| |||| |||||||    
T  16799340 tttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataacacc 16799439  T
Q  540 aaaa 543  Q
    ||||    
T  16799440 aaaa 16799443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 27924267 - 27924066
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||  || ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||          ||| ||| |||  |||||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgacctatt 27924168  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||||      || |||||||||||||||||||||||||||  || |||||||||||    
T  27924167 tatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaacaccaa 27924068  T
Q  542 aa 543  Q
    ||    
T  27924067 aa 27924066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 357 - 543
Target Start/End: Original strand, 40389461 - 40389652
Alignment:
Q  357 tccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttt 456  Q
    ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    |           || ||| |||||||||||||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaattttttttttttttttaa-agcaatgttctatttatattttt 40389559  T
Q  457 taaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||| || || |||||||||||||||||||      |||||||||||||||||||  |||||||||| ||||||||||| ||||    
T  40389560 taaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacccccacctaacactaaaa 40389652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 7671118 - 7670908
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta---------nnnnnnnnnaaagagcgat 439  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||| ||| ||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaat 7671019  T
Q  440 gttctatttata-ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacc 532  Q
    |||||||||||| |||||||||||||||||| || ||  ||||||| | ||||||      | ||||||||||||||||||||||||||| | | |||||    
T  7671018 gttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T
Q  533 taacaccaaaa 543  Q
    |||||||||||    
T  7670918 taacaccaaaa 7670908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 494
Target Start/End: Complemental strand, 7338170 - 7338038
Alignment:
Q  363 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn-aaagagcgatgttctatttatattttttaaaa 461  Q
    |||||| |||||||||||||| |||||||||||||| ||  ||||||||||||||||           ||||||| ||||||||||||||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacgttttttttttttaaagagcaatgttctatttatattttttaaaa 7338071  T
Q  462 gataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||| || ||||||||||||||||||    
T  7338070 gataaatacaaggtgtcgtatatatgcggtaca 7338038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 495
Target Start/End: Original strand, 31881348 - 31881496
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg--tannnnnnnnnaaagagcgatgttctat 446  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||| || |||| ||||||||||||||  |          ||||||| |||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttctat 31881447  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| ||||    
T  31881448 ttatattttttaaaagataaatacacggtgccgtatatatgcggaacat 31881496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 526
Target Start/End: Original strand, 23284022 - 23284161
Alignment:
Q  393 aagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggta 492  Q
    ||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||   ||||||||| || ||||||||||||||||    
T  23284022 aagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggta 23284121  T
Q  493 c------atgtgaaaatgactaccgtatacatgaggaacc 526  Q
    |      |  ||||||||||||||||||||||||||||||    
T  23284122 cacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 348 - 420
Target Start/End: Original strand, 23283942 - 23284014
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    |||||||||||||||||||||| ||||||| | | | ||||||||||||||||||||||||||||||||||||    
T  23283942 ccagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaacgta 23284014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 2412183 - 2412087
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggt------acatgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |      | |||||||||| ||||| ||||||||||||||||||    
T  2412183 atgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctc 2412087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 2530902 - 2530998
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||||||  ||||||||||||||||||||| || |||||||||| ||||||||      |||||||| ||||| ||||||||||||||||||    
T  2530902 atgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctc 2530998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 14318390 - 14318486
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||| | |||||       ||||||| ||||||||||||||||||||||||    
T  14318390 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacctc 14318486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 524
Target Start/End: Original strand, 36868881 - 36868973
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaa 524  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||||| |||||      |||||||||| ||||||||||||||||||||    
T  36868881 atgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 494
Target Start/End: Original strand, 26718864 - 26719010
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||| |||  |||| ||||||||||| ||||  | ||||||||| || || ||||||| ||||||||         |||||   ||||||||||    
T  26718864 ccagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatt 26718963  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    || | ||||||||||||||||||||||| ||||||||||||| ||||    
T  26718964 taaaatttttaaaagataaatacaaagtgtcgtatatatgcgataca 26719010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 494
Target Start/End: Original strand, 26988608 - 26988754
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||| |||  |||| ||||||||||| ||||  | ||||||||| || || ||||||| ||||||||         |||||   ||||||||||    
T  26988608 ccagggccgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatt 26988707  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    || | ||||||||||||||||||||||| ||||||||||||| ||||    
T  26988708 taaaatttttaaaagataaatacaaagtgtcgtatatatgcgataca 26988754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 1366531 - 1366627
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||| |||||||||||||  | | ||||||||||| |||      |||||||||| ||||||||||| ||||||||||||    
T  1366531 atgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctc 1366627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 22648741 - 22648790
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||    
T  22648741 atgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatg 22648790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 530
Target Start/End: Complemental strand, 10407556 - 10407458
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctcca 530  Q
    |||||||||||| ||||||||||||||||| |||| || ||||| |||||  ||||||      |||||||| |||||||||| ||||||||| |||||    
T  10407556 atgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctcca 10407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 34756615 - 34756654
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctg 34756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 31881597 - 31881630
Alignment:
Q  573 ccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||||    
T  31881597 ccatccttgagggaggcccagctcgtttgagctg 31881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 33037875 - 33037826
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    ||||| |||||| ||||||||||||||||||||||  |||||||||||||    
T  33037875 atgttttatttaaattttttaaaagataaatacaagatatcgtatatatg 33037826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 486
Target Start/End: Complemental strand, 24395834 - 24395786
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatat 486  Q
    |||||||||||| |||||||||||||||||||||| || | ||||||||    
T  24395834 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatat 24395786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 606249 - 606215
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaa 472  Q
    |||||||||||| ||||||||||||||||||||||    
T  606249 atgttctatttaaattttttaaaagataaatacaa 606215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 606
Target Start/End: Original strand, 22987473 - 22987507
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||| ||||||||||||||||||||||||||||    
T  22987473 cccatctttgagggaggcccagctcgtttgagctg 22987507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 2024647 - 2024696
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| ||||||| |||||||||||||| ||  ||||||||||    
T  2024647 atgttctatttaaatttttttaaagataaatacaatgtgccgtatatatg 2024696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 22875034 - 22875001
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaag 474  Q
    ||||||||| ||||||||||||||||||||||||    
T  22875034 ttctatttaaattttttaaaagataaatacaaag 22875001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 30853325 - 30853292
Alignment:
Q  573 ccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||| |||||||||||||||||||||||    
T  30853325 ccatccttgaaggaggcccagctcgtttgagctg 30853292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 34425998 - 34425949
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||  |||||||||||||||||||||| ||  ||||||||||    
T  34425998 atgttctatttcaattttttaaaagataaatacaaggtgccgtatatatg 34425949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 1e-86; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 353 - 606
Target Start/End: Complemental strand, 1105717 - 1105457
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatat 452  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||         |||||| ||||||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatat 1105618  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatca 546  Q
    |||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  1105617 tttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaaatca 1105518  T
Q  547 atcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1105517 atcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 1105457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 5128758 - 5129023
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatc-aaaacgtannnnnnnnna-aagagcgatgttctat 446  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||          | ||||||||| ||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgtttttttttttagaagagcgatattctat 5128857  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||| || ||       |||||||||||||||||||||||||||||||||||||||||||||    
T  5128858 ttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 5128957  T
Q  541 aaatcaatcatgaggaaccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  5128958 aaatcaatcatgaggaaccccactcttgaggcctatccttgagggaggcccagctcgtttgagctg 5129023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 37514848 - 37514584
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn--aaagagcgatgttctat 446  Q
    |||||||||||||||||||| |||||||| ||   |||||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagcg--gggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaagagcgatgttctat 37514751  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||       ||||||||||||||||||||||||| ||| | |||||||||||||    
T  37514750 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacacca 37514651  T
Q  541 aaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||| || ||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  37514650 aaatcaatcatgagaaacccccactcttgaggcccatccttggaggaggcccagctcgtttgagctg 37514584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 349 - 570
Target Start/End: Complemental strand, 32915575 - 32915346
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac-gtannnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctatt 32915476  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||      | || ||||||| |||||||||||||||||||| ||||||||||||||    
T  32915475 tatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacaccaa 32915376  T
Q  542 aatcaatcatga-ggaaccccactcttgag 570  Q
    |||||||||||| ||| |||||||||||||    
T  32915375 aatcaatcatgagggacccccactcttgag 32915346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 348 - 543
Target Start/End: Complemental strand, 34027769 - 34027568
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| ||| ||||||||||    
T  34027769 ccagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatt 34027670  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || || |||||||||||||||||      | |||||||||||||| |||||||||||||||| ||||||||||||||    
T  34027669 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaacaccaa 34027570  T
Q  542 aa 543  Q
    ||    
T  34027569 aa 34027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 353 - 547
Target Start/End: Complemental strand, 47129172 - 47128972
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatat 452  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||         ||||| | |||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttatat 47129073  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatca 546  Q
    |||||||||||||||||||| ||  ||||||||||||||||      | || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  47129072 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatca 47128973  T
Q  547 a 547  Q
    |    
T  47128972 a 47128972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 349 - 538
Target Start/End: Complemental strand, 54780968 - 54780771
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||    
T  54780968 cagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 54780869  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||    
T  54780868 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 348 - 547
Target Start/End: Original strand, 34768491 - 34768696
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||         ||||||| ||||||||||    
T  34768491 ccagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacatattttttttaaaagagcaatgttctatt 34768590  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | |||||||||| |||||||||||||||||||| ||||||||||||||    
T  34768591 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaa 34768690  T
Q  542 aatcaa 547  Q
    ||||||    
T  34768691 aatcaa 34768696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 10979092 - 10978885
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn---aaagagcgatgttcta 445  Q
    |||||||||| ||||||||||||||| |  ||||||||||||||||||||  ||||||||||||||||||||            ||||||| ||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttcta 10978993  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||    
T  10978992 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacacc 10978893  T
Q  540 aaaatcaa 547  Q
    ||||||||    
T  10978892 aaaatcaa 10978885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 363 - 539
Target Start/End: Original strand, 43455463 - 43455645
Alignment:
Q  363 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaag 462  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||         ||||||| |||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtattatttttaaaagagcaatgttctatttatattttttaaaag 43455562  T
Q  463 ataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||    
T  43455563 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 43455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 348 - 535
Target Start/End: Original strand, 2790658 - 2790851
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |          ||||| | ||||||||||    
T  2790658 ccagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattttttttttaaaagaacaatgttctatt 2790757  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaa 535  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||    
T  2790758 tatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 32128774 - 32128573
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||          ||||||| ||||||||||    
T  32128774 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 32128675  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || || |||||||||||||||||      | ||||||||||||||||||||||| || |||| ||||||||||||||    
T  32128674 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaacaccaa 32128575  T
Q  542 aa 543  Q
    ||    
T  32128574 aa 32128573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 361 - 547
Target Start/End: Original strand, 38209520 - 38209713
Alignment:
Q  361 tgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn-aaagagcgatgttctatttatattttttaa 459  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||          ||||||| ||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatattttttaa 38209619  T
Q  460 aagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    ||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38209620 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 38209713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 48209436 - 48209225
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtga-----taaaatcaaaacgta--nnnnnnnnnaaagagcgatgt 441  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||     |||||||||||||||           ||||||| ||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattttttttttaaaagagcaatgt 48209337  T
Q  442 tctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaa 535  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||      ||||||| |||||||||||||||||||| |||| ||||||||    
T  48209336 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaa 48209237  T
Q  536 caccaaaatcaa 547  Q
    ||||||||||||    
T  48209236 caccaaaatcaa 48209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 16845210 - 16845010
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||         ||||||| |||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaa-aagccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 16845112  T
Q  449 ata-ttttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||| |||||||||||||||||| || || |||||||||||  |||||       ||||||||||||||||||||||||||||||| ||||||||||||||    
T  16845111 atatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 16845012  T
Q  542 aa 543  Q
    ||    
T  16845011 aa 16845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 10428116 - 10428327
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||         ||| ||| |||||||||||    
T  10428116 cagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaa-agcaatgttctattt 10428214  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtaca--------------tgtgaaaatgactaccgtatacatgaggaacctccaccta 534  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||    
T  10428215 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctccaccta 10428314  T
Q  535 acaccaaaatcaa 547  Q
    |||||||||||||    
T  10428315 acaccaaaatcaa 10428327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 19498691 - 19498493
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||| || ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||         ||||||| |||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgtattttgtttaaaagagcaatgttctattt 19498592  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  ||  ||||||||||||      | |||||||||||||| |||||||||||||||| |||||||||||||||    
T  19498591 atattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaa 19498494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 494
Target Start/End: Complemental strand, 17679589 - 17679444
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||         ||||||| || ||||||||    
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatattctattt 17679490  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||    
T  17679489 atattttttaaaagataaatacaaggtgccgtatatatgcggtaca 17679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 37777140 - 37777341
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    |||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||          ||| ||  ||||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctatt 37777239  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | |||||||||||||||||||||||||||||||  || ||||||||||    
T  37777240 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacaccaa 37777339  T
Q  542 aa 543  Q
    ||    
T  37777340 aa 37777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 352 - 543
Target Start/End: Original strand, 35779248 - 35779443
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||| |||||||||||||| ||| |||  ||||||||||||||| ||||||||||||||||||||         ||||||| |||||||| |||||    
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgta-ttttttttaaagagcaatgttcta-ttata 35779345  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||||||| || |||||||||||||||||      | |||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  35779346 ttttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatcaaaa 35779443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 54083160 - 54083360
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||         ||| | | ||| |||||||    
T  54083160 cagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctattt 54083259  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  ||||||||||||||||      |  | |||||||||||||||||||||||||||| | |||||||||||||    
T  54083260 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaacaccaaa 54083359  T
Q  543 a 543  Q
    |    
T  54083360 a 54083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 55255447 - 55255254
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |         ||||||| |||||| |||    
T  55255447 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 55255348  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacatgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    ||||||||||||||||||||||||| ||  ||     |  |   | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  55255347 tatattttttaaaagataaatacaaggtgccg---ccaccc---agaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 55255254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 345 - 488
Target Start/End: Original strand, 16922241 - 16922386
Alignment:
Q  345 cacccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg--tannnnnnnnnaaagagcgatgtt 442  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||  |          ||||||| |||||    
T  16922241 cacccagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgtt 16922340  T
Q  443 ctatttatattttttaaaagataaatacaaagtatcgtatatatgc 488  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  16922341 ctatttatattttttaaaagataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 40089714 - 40089505
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||         ||| ||| ||||| |||||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaaagcaatgttttattt 40089615  T
Q  449 atat---------tttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacct 533  Q
    ||||         ||||||||||||||||| || ||  ||||||||||||||||||      ||||||||||||||||||||||||||||||| ||||||    
T  40089614 atatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacct 40089515  T
Q  534 aacaccaaaa 543  Q
    ||||||||||    
T  40089514 aacaccaaaa 40089505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 439 - 547
Target Start/End: Complemental strand, 13460306 - 13460192
Alignment:
Q  439 tgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctccacc 532  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||| |      |||||||||||||||||||||||| ||||||| |||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  533 taacaccaaaatcaa 547  Q
    |||||||||||||||    
T  13460206 taacaccaaaatcaa 13460192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 543
Target Start/End: Complemental strand, 35465284 - 35465096
Alignment:
Q  360 ctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaa 459  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||         ||||| | ||||| |||||||||||||||     
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatattttttttaaaagaacaatgttatatttatattttttac 35465185  T
Q  460 aagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||| ||||   ||||||||||||||||      | |||||||| |||||||||||||||||||| | ||||||||||||||||    
T  35465184 aagataaata-aaaggtgcgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaaa 35465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 16882313 - 16882513
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||         ||| | | |||||||||||    
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgttctattt 16882412  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||| ||||||||||||||||| || ||  ||| ||||| ||||||      | |||||||||||||||||||  ||| ||||||  ||||||||||||||    
T  16882413 atactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacaccaaa 16882512  T
Q  543 a 543  Q
    |    
T  16882513 a 16882513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 355 - 543
Target Start/End: Original strand, 38352189 - 38352373
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattt 454  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||         ||| ||  ||| |||||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaaagtaatgatctatttatattt 38352288  T
Q  455 tttaaaagataaatacaaagtatcgtatatatgcggtacatgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||| || ||  ||  || |  |   | | ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  38352289 tttaaaagataaatataaggtggcg-gtacaccc---aaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaaa 38352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 352 - 494
Target Start/End: Complemental strand, 51964897 - 51964752
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||| ||| ||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||         ||||||| ||||||||||||||    
T  51964897 ggccatccttgaaaattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata 51964798  T
Q  452 tttttt---aaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||   ||||||||||||||| ||  |||||||||||| ||||    
T  51964797 ttttttttaaaaagataaatacaaggtgccgtatatatgcgataca 51964752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 484
Target Start/End: Original strand, 23508427 - 23508564
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    |||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||          || |||| ||||||||||    
T  23508427 caggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattttttttttaatgagcaatgttctatt 23508526  T
Q  448 tat-attttttaaaagataaatacaaagtatcgtatat 484  Q
    ||| |||||||||||||||||||||| || ||||||||    
T  23508527 tataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 349 - 495
Target Start/End: Original strand, 9578575 - 9578729
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtga-----taaaatcaaaacgta--nnnnnnnnnaaagagcgatgt 441  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||     |||||||||||||||           ||||||| ||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaattaaaatcaaaacgtatttcttttttaaaagagcaatgt 9578674  T
Q  442 tctatttatattttttaaaagataaatacaaagta-tcgtatatatgcggtacat 495  Q
    ||||||||||||||||||||||||||||||| |||  | ||||||||||||||||    
T  9578675 tctatttatattttttaaaagataaatacaaggtagccatatatatgcggtacat 9578729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 24969786 - 24969716
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt 419  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaacgt 24969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 430 - 494
Target Start/End: Original strand, 51691914 - 51691978
Alignment:
Q  430 aaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||    
T  51691914 aaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtaca 51691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 23509869 - 23509920
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23509869 gtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaa 23509920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 24969473 - 24969426
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24969473 gtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 24969426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 27112130 - 27112034
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||| ||||| |||||||||||||||||||||| ||  | |||||||||| ||||      ||||||||| ||||||||||||||||||||||||    
T  27112130 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 27112034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 36118465 - 36118561
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||| | |||      || ||||||| ||||||||||||||||| ||||||    
T  36118465 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctc 36118561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 438 - 494
Target Start/End: Original strand, 39655261 - 39655317
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||| |||||||||||||||||||||||||  || ||||||||||||||    
T  39655261 atgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtaca 39655317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 980395 - 980336
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataa 408  Q
    |||| |||||||||||||||||||||||||||||||||| | ||| |||||| |||||||    
T  980395 caggaccgtccctgagaattcggaggctcggctctgggattaaaaggaggccggtgataa 980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 13460360 - 13460305
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtg 404  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||    
T  13460360 cagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 528
Target Start/End: Complemental strand, 52468459 - 52468290
Alignment:
Q  364 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaaga 463  Q
    |||||||||||||||||||||    |||||||||| | || ||||||| ||||||||         ||||| | |||||||||||| |||||||||||||    
T  52468459 gaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtattttttta-aaagaacaatgttctatttaaattttttaaaaga 52468361  T
Q  464 taaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||| ||  ||||||||||   |||||      |||||||| |||||||||| |||||||||||||    
T  52468360 taaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctc 52468290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 2135331 - 2135385
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||||    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacat 2135385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 36178772 - 36178684
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatga 520  Q
    |||||||||||| ||| |||||||||||||||||| || ||||||||||||| |||      |||||||||| |||||| |||||||||    
T  36178772 atgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 10431442 - 10431482
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  10431442 ttgaggcccatccttgagggaggcccagctcgtttgagctg 10431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 38209842 - 38209881
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctg 38209881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 55255145 - 55255106
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctg 55255106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 606
Target Start/End: Original strand, 9579475 - 9579509
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||||||||||||||||||||    
T  9579475 cccatccttgagggaggcccagctcgtttgagctg 9579509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 606
Target Start/End: Original strand, 9585170 - 9585204
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||||||||||||||||||||    
T  9585170 cccatccttgagggaggcccagctcgtttgagctg 9585204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 450 - 528
Target Start/End: Original strand, 4167910 - 4167994
Alignment:
Q  450 tattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||      | |||||||| |||||| |||||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctc 4167994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 17679283 - 17679243
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  17679283 ttgaggcccatccttgagggaggctcagctcgtttgagctg 17679243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 443 - 495
Target Start/End: Complemental strand, 40217327 - 40217275
Alignment:
Q  443 ctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||||| ||||||||||||||||||| || || ||||||||||||| |||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacat 40217275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 45560704 - 45560744
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctg 45560744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 47128047 - 47128007
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  47128047 ttgaggcccatccttgagggaggcccagctcgtttgggctg 47128007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 48208516 - 48208476
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  48208516 ttgaggcccatccttgagggaggcccaactcgtttgagctg 48208476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 605
Target Start/End: Original strand, 34769533 - 34769572
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagct 605  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  34769533 ttgaggcccatccttgagggaggcccaactcgtttgagct 34769572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 24614053 - 24614019
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaa 472  Q
    |||||||||||| ||||||||||||||||||||||    
T  24614053 atgttctatttaaattttttaaaagataaatacaa 24614019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 36362886 - 36362928
Alignment:
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgc 488  Q
    |||| |||||||||||||||||||||||||  |||||||||||    
T  36362886 tttaaattttttaaaagataaatacaaagtgccgtatatatgc 36362928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 472
Target Start/End: Complemental strand, 15735189 - 15735156
Alignment:
Q  439 tgttctatttatattttttaaaagataaatacaa 472  Q
    ||||||||||| ||||||||||||||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaa 15735156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 30507129 - 30507162
Alignment:
Q  438 atgttctatttatattttttaaaagataaataca 471  Q
    |||||||||||| |||||||||||||||||||||    
T  30507129 atgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 39329399 - 39329448
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    ||||||| |||| |||||||||||||||||||||| || | |||||||||    
T  39329399 atgttctctttaaattttttaaaagataaatacaaggtgttgtatatatg 39329448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 2975358 - 2975410
Alignment:
Q  365 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac 417  Q
    |||||| | |||||||||||  |||||||||||| || |||||||||||||||    
T  2975358 aattcgaatgctcggctctgaaaatgaaaagaggtcaatgataaaatcaaaac 2975410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 13459850 - 13459810
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  13459850 ttgaggcccatccttaagggaggctcagctcgtttgagctg 13459810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 27596639 - 27596679
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||| | ||||||||||||||||||||||||    
T  27596639 ttgaggcccatcctcgggggaggcccagctcgtttgagctg 27596679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 2e-85; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 347 - 606
Target Start/End: Original strand, 12596205 - 12596469
Alignment:
Q  347 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||    
T  12596205 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt--ttttttttaaagagcgatgttctat 12596302  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||| |||||||||||||| ||  |||||||||| ||||||       ||||||||||||||||||| ||||||||||| |||||||||||||    
T  12596303 ttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacacca 12596402  T
Q  541 aaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12596403 aaatcaatcatgaggaacccccactcttgagggccatccttgagggaggcccagctcgtttgagctg 12596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 348 - 547
Target Start/End: Complemental strand, 29077405 - 29077200
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         ||||||| ||||||||||    
T  29077405 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatt 29077306  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| || |||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29077305 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 29077206  T
Q  542 aatcaa 547  Q
    ||||||    
T  29077205 aatcaa 29077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 430 - 605
Target Start/End: Complemental strand, 10955587 - 10955405
Alignment:
Q  430 aaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgagga 523  Q
    |||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||       ||||||||||||||||||||||||||||    
T  10955587 aaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagga 10955488  T
Q  524 acctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagct 605  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  10955487 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagct 10955405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 352 - 547
Target Start/End: Original strand, 8171460 - 8171661
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||         ||||||| ||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtattttttttaaaagagcaatgttctatttata 8171559  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatc 545  Q
    ||||||||||||||||||||| ||  ||||||||||||||||      |  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8171560 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatc 8171659  T
Q  546 aa 547  Q
    ||    
T  8171660 aa 8171661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 18776682 - 18776884
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  | |         ||||||| |||||||||    
T  18776682 ccagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctat 18776781  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      |||||||||||||||||||||||||||| |||| |||||||||||||    
T  18776782 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacacca 18776881  T
Q  541 aaa 543  Q
    |||    
T  18776882 aaa 18776884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 23550988 - 23551189
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||         ||| ||| ||| |||||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaaagcaatgatctattt 23551087  T
Q  449 ata-ttttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||| |||||||||||||||||| || || |||||||||||||||||||      ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23551088 atatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23551187  T
Q  542 aa 543  Q
    ||    
T  23551188 aa 23551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 20091197 - 20091399
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||| | | ||| |||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctat 20091296  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||    
T  20091297 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 20091396  T
Q  541 aaa 543  Q
    |||    
T  20091397 aaa 20091399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 10329327 - 10329528
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||| ||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatt 10329426  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcgg------tacatgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  |||||||||| ||       | | |||||||||||||||||||||||||| |||| |||| |||||||||    
T  10329427 tatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaacaccaa 10329526  T
Q  542 aa 543  Q
    ||    
T  10329527 aa 10329528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 24525599 - 24525803
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta----nnnnnnnnnaaagagcgatgttct 444  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||              || | | |||||||    
T  24525599 cagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttct 24525698  T
Q  445 atttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    ||||||||||||||||||||||||| || ||  ||| ||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||    
T  24525699 atttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacac 24525798  T
Q  539 caaaa 543  Q
    |||||    
T  24525799 caaaa 24525803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 48983756 - 48983962
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta------nnnnnnnnnaaagagcgatgtt 442  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||               ||| | | ||| |    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatgat 48983855  T
Q  443 ctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaac 536  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||      | |||||||| |||||||||||||||||||||| |||||||||    
T  48983856 ctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaac 48983955  T
Q  537 accaaaa 543  Q
    |||||||    
T  48983956 accaaaa 48983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 349 - 494
Target Start/End: Complemental strand, 26254178 - 26254032
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||          ||||||| ||||||||||    
T  26254178 cagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatt 26254079  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  26254078 tatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 26254032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 351 - 543
Target Start/End: Complemental strand, 8239869 - 8239669
Alignment:
Q  351 gggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttat 450  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||         ||||||  |||||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctatttat 8239770  T
Q  451 attttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaa--cctccacctaacaccaaa 542  Q
    ||||||||||| ||||||| || ||  |||||||||| |||||      |||||||||||| ||||||||| ||||||||  ||||||| ||||||||||    
T  8239769 attttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaaa 8239670  T
Q  543 a 543  Q
    |    
T  8239669 a 8239669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 348 - 543
Target Start/End: Complemental strand, 19692280 - 19692078
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||| ||||| |||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||          ||||||| |||||||||    
T  19692280 ccagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctat 19692181  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    ||||||||||||||||||||||| || ||  | ||||||||||||||      | ||||||||||||  |||||||||||||||||  | ||||||||||    
T  19692180 ttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacacca 19692081  T
Q  541 aaa 543  Q
    |||    
T  19692080 aaa 19692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 349 - 522
Target Start/End: Complemental strand, 28749895 - 28749715
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||           ||||||| || ||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatatttttttttcaaaagagcaatattctat 28749796  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgagg 522  Q
    |||||||||| ||||||||||||||| ||  ||||||||||||||||      |||||||||| ||||||||||||||||||    
T  28749795 ttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 38414793 - 38414994
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||| ||||||| |||||||||||||||| |||||| ||||||||||| | ||| ||||||||||||||||          ||||||| | ||||||||    
T  38414793 cagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctatt 38414892  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    | |||||||||||||||||||| || ||  |||||||||| |||||      | |||||||||||||| |||||||||||||||| ||||||||||||||    
T  38414893 tgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaa 38414992  T
Q  542 aa 543  Q
    ||    
T  38414993 aa 38414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 47984885 - 47985088
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac--gtannnnnnnnnaaagagcgatgttctat 446  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||  ||          ||| ||| |||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaaagcaatgttctat 47984984  T
Q  447 ttata-ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||| |||||||||||| ||||| || ||  ||||||||||||||||      | ||||||||||| ||||||||||||||||||| |||||||||||     
T  47984985 ttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaacaca 47985084  T
Q  540 aaaa 543  Q
    ||||    
T  47985085 aaaa 47985088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 349 - 420
Target Start/End: Complemental strand, 25010611 - 25010540
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgta 25010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 350 - 494
Target Start/End: Original strand, 33162257 - 33162402
Alignment:
Q  350 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn-aaagagcgatgttctattt 448  Q
    |||||| | ||| |||||||||||  |||| ||||||| |||||||||| || ||||||||| ||||||||          ||||||| ||| |||||||    
T  33162257 agggccattcctaagaattcggagattcggttctgggagtgaaaagaggtcaatgataaaattaaaacgtattttttttttaaagagcaatgctctattt 33162356  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||    
T  33162357 atattttttaaaagataaatacaaggtgccgtatatatgcggtaca 33162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 420
Target Start/End: Original strand, 40357303 - 40357368
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacgta 40357368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 439 - 494
Target Start/End: Original strand, 21763595 - 21763650
Alignment:
Q  439 tgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgataca 21763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 2611269 - 2611365
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||||||||       |||||||| || || ||||||||||||||||||    
T  2611269 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctc 2611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 36891673 - 36891577
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||||||||||||||||| ||| ||||||| || | |||||||| ||||||||      |||||||| ||||||||||||||||||||||||    
T  36891673 atgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 36891577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 25010464 - 25010417
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25010464 gtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 25010417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 23859168 - 23859072
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||      |  ||||||| ||||||||||||||||||| ||||    
T  23859168 atgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctc 23859072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 9021812 - 9021898
Alignment:
Q  443 ctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgagga 523  Q
    ||||||| |||||||||||||||||||||| ||  ||||||||||||||||      | |||||||| |||||||||||||||||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 415
Target Start/End: Complemental strand, 10955671 - 10955605
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaa 415  Q
    |||||| |||| ||||||||||||||||| |||| ||||||||| ||||| ||||||| ||||||||    
T  10955671 cagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaa 10955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 495
Target Start/End: Original strand, 6765688 - 6765745
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||| || ||||||    
T  6765688 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacat 6765745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 472
Target Start/End: Original strand, 12419413 - 12419536
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||| |||  |||| ||||||||||||| ||  | |||||||||||| || ||||||| | ||||||         ||||| | |||||||||||    
T  12419413 cagggccgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctattt 12419512  T
Q  449 atattttttaaaagataaatacaa 472  Q
    | ||||||||||||||||||||||    
T  12419513 aaattttttaaaagataaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 28749647 - 28749607
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctg 28749607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 18777019 - 18777058
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18777019 tgaggcccatccttgagggaggcccagctcgtttgagctg 18777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 489
Target Start/End: Complemental strand, 20153296 - 20153245
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcg 489  Q
    ||||| |||||| ||||||||||||||||||||||||| | |||||||||||    
T  20153296 atgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcg 20153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 27237430 - 27237479
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| |||||||||||||||||||||| || | |||||||||    
T  27237430 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatatg 27237479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 494
Target Start/End: Complemental strand, 23744891 - 23744835
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||| ||| |||||||||||||||||||||| ||  || ||||||||||||||    
T  23744891 atgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtaca 23744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 12981421 - 12981325
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||||||  ||||||||||||||||||||| ||  | |||||| |||||||      | |||||||| ||||| ||||| ||||||||||||    
T  12981421 atgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctc 12981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 36902931 - 36902980
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| ||||||||| ||||||||||||  | |||||||||||    
T  36902931 atgttctatttaaattttttaatagataaatacaagatgtcgtatatatg 36902980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 9014185 - 9014233
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatat 486  Q
    ||||| |||||| |||||||||||||||||||||| || | ||||||||    
T  9014185 atgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 2e-85; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 348 - 606
Target Start/End: Complemental strand, 47467873 - 47467607
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn-aaagagcgatgttctat 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||           |||||||||||||||||    
T  47467873 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctat 47467774  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  |||||||||||| ||||       ||||||||||||||||||||||||||||||| |||||||||||||    
T  47467773 ttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 47467674  T
Q  541 aaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  47467673 aaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggctcagctcgtttgagctg 47467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 348 - 606
Target Start/End: Complemental strand, 21582961 - 21582694
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn--aaagagcgatgttcta 445  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||||| | ||||| ||    
T  21582961 ccagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgtttta 21582862  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||    
T  21582861 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 21582762  T
Q  540 aaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  21582761 aaaatcaatcatgaggaacccccactcttgaggcccatccttaagggatgcccagctcgtttgagctg 21582694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 352 - 606
Target Start/End: Original strand, 53149235 - 53149497
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatttat 450  Q
    ||||||| |||||||||||||||||| | || |||||||||||||| |||||||||||||||||||||          ||| ||||||||||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttat 53149334  T
Q  451 attttttaaaagataaatacaaagtatcgtatatatgcggtacatg------tgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaat 544  Q
    |||||||||||||||||||||| ||  |||||||||||||||||        | |||||||||||||||||||||||||||| |||||||||||||||||    
T  53149335 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacaccaaaat 53149434  T
Q  545 caatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  53149435 caatcatgaggaacccccactcttgaggcccatccttggtggaggcccagctcgtttgagctg 53149497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 42098989 - 42098724
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatt 447  Q
    |||||||||||||||||||||| |||||| |||| || |||||||||||||||||||||||||||||| ||          ||| |||||||||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtctttttttttaaaagagcgatgttctatt 42098890  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||| |       ||||||||||||||||||||||||||||||| | || |||||||||    
T  42098889 tatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccctacttaacaccaa 42098790  T
Q  542 aatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  42098789 aatcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccaactcgtttgagctg 42098724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 43207157 - 43207356
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||         ||||||| |||||||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctattt 43207256  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat-----gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||||||| || ||  ||||||||||||||||||     ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43207257 atattttttaaaagataaatataaggtgccgtatatatgcggtacatcaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 43207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 349 - 548
Target Start/End: Original strand, 8073257 - 8073461
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||         ||||||  |||||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctattt 8073356  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| || |||||||||||||||||      | ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  8073357 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc-ccacataacaccaaa 8073455  T
Q  543 atcaat 548  Q
    | ||||    
T  8073456 agcaat 8073461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 38681011 - 38681216
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| ||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 38681110  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||| ||||||||||||      ||||||||||||||||||||||||||||| | ||||||||||||||    
T  38681111 tatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacaccaa 38681210  T
Q  542 aatcaa 547  Q
    ||||||    
T  38681211 aatcaa 38681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 54619121 - 54619326
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| | |         ||||||| ||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctatt 54619220  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  54619221 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 54619320  T
Q  542 aatcaa 547  Q
    ||||||    
T  54619321 aatcaa 54619326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 350 - 547
Target Start/End: Original strand, 3953816 - 3954019
Alignment:
Q  350 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattta 449  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||| |||         ||||| | ||||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctattta 3953915  T
Q  450 tattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  3953916 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaaa 3954015  T
Q  544 tcaa 547  Q
    ||||    
T  3954016 tcaa 3954019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 353 - 543
Target Start/End: Complemental strand, 44708660 - 44708464
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatat 452  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||         ||| ||  |||||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagaaatgttctatttatat 44708561  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||||||| || ||  ||||||||| ||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44708560 tttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 44708464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 27078486 - 27078692
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||| ||           ||| ||| |||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27078585  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggt------acatgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||||||  ||||||||||||||      | | |||||||||||||||||||||||||| |||| | |||||||||||    
T  27078586 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27078685  T
Q  541 aaatcaa 547  Q
    |||||||    
T  27078686 aaatcaa 27078692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 27084283 - 27084489
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||| ||           ||| ||| |||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27084382  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggt------acatgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||||||  ||||||||||||||      | | |||||||||||||||||||||||||| |||| | |||||||||||    
T  27084383 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27084482  T
Q  541 aaatcaa 547  Q
    |||||||    
T  27084483 aaatcaa 27084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 36715942 - 36716148
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||           ||||||| |||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctat 36716041  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||| ||| ||||||||| ||||| ||| |||||||||||||    
T  36716042 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacacca 36716141  T
Q  541 aaatcaa 547  Q
    |||||||    
T  36716142 aaatcaa 36716148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 361 - 547
Target Start/End: Complemental strand, 18372658 - 18372462
Alignment:
Q  361 tgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaa 460  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||         ||||||| |||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaa 18372559  T
Q  461 agataaatacaaagtatcgtatatat----gcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    |||||||||||| || ||||||||||    |||||||      | ||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  18372558 agataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaaatcaa 18372462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 34290554 - 34290755
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||          ||| | | ||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatt 34290653  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | |||||||||||||||||||| |||||||||| ||||||||||||||    
T  34290654 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaa 34290753  T
Q  542 aa 543  Q
    ||    
T  34290754 aa 34290755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 494
Target Start/End: Original strand, 50258542 - 50258687
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||| ||         |||||||||||||||||||    
T  50258542 cagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatatttttttaaaaagagcgatgttctattt 50258641  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||    
T  50258642 atattttttaaaaaataaatacaaggtgtcgtatatatgcggtaca 50258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 50939152 - 50939352
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||         ||| ||| ||| |||||||    
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgatctattt 50939251  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  |||||||||  |||||      | || |||||||||||||||||||||||||||| || ||||||||||||    
T  50939252 atattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaacaccaaa 50939351  T
Q  543 a 543  Q
    |    
T  50939352 a 50939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 353 - 543
Target Start/End: Complemental strand, 37168551 - 37168354
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatttata 451  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| | | ||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttata 37168452  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggt------acatgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||||||||||| || ||  |||||||||| |||      | | ||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  37168451 ttttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacactaaaa 37168354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 348 - 543
Target Start/End: Original strand, 53506801 - 53507003
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttcta 445  Q
    |||||||||||| | |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||           ||| | | ||||||||    
T  53506801 ccagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaacaatgttcta 53506899  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacc 539  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||      | |||||||||||||||||||||||||| |||| ||||||||||||    
T  53506900 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacacc 53506999  T
Q  540 aaaa 543  Q
    ||||    
T  53507000 aaaa 53507003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 54407073 - 54407276
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg----tannnnnnnnnaaagagcgatgttct 444  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |          ||| | | |||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttct 54407172  T
Q  445 atttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    ||||||||||||||||||||||||| || ||  ||||||||||||||||||      ||||||||||||||||||||||| || |||| |||||||||||    
T  54407173 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaacac 54407271  T
Q  539 caaaa 543  Q
    |||||    
T  54407272 caaaa 54407276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 494
Target Start/End: Complemental strand, 36606149 - 36606006
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||         | ||||| ||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttata 36606050  T
Q  452 tttttt-aaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||| ||||||||||||||| ||  |||||||||||||||||    
T  36606049 ttttttaaaaagataaatacaaggtgccgtatatatgcggtaca 36606006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 29620363 - 29620426
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaat 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29620363 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 349 - 420
Target Start/End: Original strand, 48720429 - 48720500
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta 420  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacgta 48720500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 543
Target Start/End: Original strand, 9878643 - 9878806
Alignment:
Q  386 gaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatata 485  Q
    ||||||||||||| ||||||||||||| |||||||         ||||||| || ||||||||||||||||||||||||||||| || ||   |||||||    
T  9878643 gaatgaaaagaggtcagtgataaaatctaaacgtattttttttaaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatata 9878742  T
Q  486 tgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||      | ||||||||||||| ||||||||| ||||||| ||| ||||| ||||||    
T  9878743 tgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacgccaaaa 9878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 469
Target Start/End: Complemental strand, 48157310 - 48157196
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattt 454  Q
    ||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||||||||  |         |||  || ||| |||||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacatttttaaaaaaaatgcaatgatctatttatattt 48157211  T
Q  455 tttaaaagataaata 469  Q
    |||||||||||||||    
T  48157210 tttaaaagataaata 48157196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 438 - 494
Target Start/End: Original strand, 32319163 - 32319219
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  32319163 atgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtaca 32319219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 29620460 - 29620511
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaa 547  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  29620460 gtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaa 29620511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 606
Target Start/End: Original strand, 50258716 - 50258774
Alignment:
Q  549 catgaggaacccc-actcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  50258716 catgaggaacccccactcttgaggcccatccttgagggaggcccagctcatttgagctg 50258774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 54574835 - 54574931
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||| |||| |||||||||| ||| ||||||||||||||||      | || ||||| |||||| |||||||||||||||||    
T  54574835 atgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctc 54574931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 606
Target Start/End: Complemental strand, 13795253 - 13795213
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  13795253 ttgaggcccatccttgagggaggcccagctcgtttgagctg 13795213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 27078819 - 27078858
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctg 27078858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 27084616 - 27084655
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctg 27084655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 36605911 - 36605872
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctg 36605872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 36716276 - 36716315
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctg 36716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 38681348 - 38681387
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctg 38681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 54619454 - 54619493
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctg 54619493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 488
Target Start/End: Complemental strand, 26279640 - 26279590
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgc 488  Q
    |||||||||||| ||||||||||||||||||| || || ||||||||||||    
T  26279640 atgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgc 26279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 42453502 - 42453413
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||| ||||| |||||||||||||||||||||| || || |||||||||| ||||  | ||  ||| || |||||||||||||||||||    
T  42453502 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-tagcgtatacatgaggaacctc 42453413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 3954859 - 3954892
Alignment:
Q  573 ccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||||    
T  3954859 ccatccttgagggaggcccagctcgtttgagctg 3954892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 8420424 - 8420375
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  8420424 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatg 8420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 48157173 - 48157126
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||||||| |||||||||||||||| |||| ||||| |||||    
T  48157173 gtgaaaatgactactgtatacatgaggaacccccacttaacatcaaaa 48157126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 606
Target Start/End: Original strand, 1148360 - 1148394
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||| ||||||||||||||||||||||||    
T  1148360 cccatccttgggggaggcccagctcgtttgagctg 1148394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 25855519 - 25855471
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    |||||||||||| |||||||||||||| ||||||| || |||||||||||    
T  25855519 atgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatg 25855471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 49393187 - 49393138
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    ||||||| |||| |||||||||||||||||||||| |  |||||||||||    
T  49393187 atgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg 49393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 3e-77; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 30832443 - 30832707
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||    
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaagcgcgatgttctattt 30832542  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatg------tgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    | ||||||||||| ||||||||||  |  |||||||||| ||||||        |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30832543 acattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaa 30832642  T
Q  543 atcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  30832643 atcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcatttgagctg 30832707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 349 - 606
Target Start/End: Original strand, 24710914 - 24711182
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn----aaagagcgatgttct 444  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||              |||||| ||||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttct 24711013  T
Q  445 atttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    |||||||||||||||||||||||||||| ||  |||||||||| ||||||       ||||||||||||||||||||||||||||||| |||||||||||    
T  24711014 atttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 24711113  T
Q  539 caaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  24711114 caaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagcttgtttgagctg 24711182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 348 - 547
Target Start/End: Original strand, 13727316 - 13727522
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| |||||||||    
T  13727316 ccagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 13727415  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||    
T  13727416 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 13727515  T
Q  541 aaatcaa 547  Q
    |||||||    
T  13727516 aaatcaa 13727522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 27788608 - 27788807
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||| || ||||||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-tttttttaaaagagcaattttctattt 27788706  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27788707 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 27788806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 21280733 - 21280528
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| ||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 21280634  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||      | || |||||||||||||||||||||||||||  ||||||||||||||    
T  21280633 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacaccaa 21280534  T
Q  542 aatcaa 547  Q
    ||||||    
T  21280533 aatcaa 21280528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 21479683 - 21479477
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||           ||||||| |||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctat 21479584  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||    
T  21479583 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 21479484  T
Q  541 aaatcaa 547  Q
    |||||||    
T  21479483 aaatcaa 21479477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 547
Target Start/End: Complemental strand, 33774305 - 33774100
Alignment:
Q  350 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn--aaagagcgatgttctatt 447  Q
    |||||| ||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||           ||||||  ||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatt 33774206  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||      |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33774205 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 33774106  T
Q  542 aatcaa 547  Q
    ||||||    
T  33774105 aatcaa 33774100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 17354142 - 17353941
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||          ||| ||| ||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctatt 17354043  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || || |||||||||||||||||      ||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  17354042 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaacaccaa 17353943  T
Q  542 aa 543  Q
    ||    
T  17353942 aa 17353941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 19737612 - 19737815
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||| |||||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||| ||          ||||||| |||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctctagga-tgaaaagaggccagtgataaaatcaaaatgttttttttttaaaagagcaatgttctattt 19737710  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||    
T  19737711 atatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 19737810  T
Q  543 atcaa 547  Q
    |||||    
T  19737811 atcaa 19737815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 349 - 537
Target Start/End: Original strand, 20711638 - 20711833
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||          ||||||| ||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 20711737  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaaca 537  Q
    |||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||| ||||||    
T  20711738 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaaca 20711833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 349 - 494
Target Start/End: Original strand, 27314097 - 27314243
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||    
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 27314196  T
Q  449 atatttttt-aaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||||||    
T  27314197 atattttttaaaaagataaatacaaggtgccgtatatatgcggtaca 27314243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 543
Target Start/End: Complemental strand, 28075960 - 28075770
Alignment:
Q  363 agaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta----nnnnnnnnnaaagagcgatgttctatttatatttttta 458  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||             ||| ||| |||||||||||||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatttttta 28075861  T
Q  459 aaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||| || ||  |||||||||||| |||      | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28075860 aaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 28075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 353 - 543
Target Start/End: Complemental strand, 34398039 - 34397844
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatat 452  Q
    ||||||||| ||||||||||| ||||  ||||||| | |||| || ||||||||||||||||||||||         ||||||| |||||||||||||||    
T  34398039 gccgtccctaagaattcggagactcgcatctggga-taaaaaaagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatat 34397941  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    |||||||||||||||||||| ||  ||||||||||||||||      | || |||||||||| |||| ||||||||||||||||| |||||||||||    
T  34397940 tttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctccacttaacaccaaaa 34397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 522
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  351 gggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnn---aaagagcgatgttctatt 447  Q
    ||||||||||| | |||| |||||||||| ||| |||||||||||||| ||||||||||||||||| |||            ||||||| ||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgagg 522  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||      |||||||||||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 357 - 543
Target Start/End: Original strand, 235151 - 235344
Alignment:
Q  357 tccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttt 456  Q
    ||||| |||||||||||| |||||| || |||||||||||| ||||||||||||||||||||||         ||| ||| ||| |||||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaaagcaatgatctatttatattttt 235250  T
Q  457 taaaagataaatacaaagtatcg--tatatatgcggtacatg------tgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaa 543  Q
    ||||||||||||| || ||  ||  ||||||| | |||||        ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  235251 taaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 438 - 495
Target Start/End: Complemental strand, 6159536 - 6159479
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  6159536 atgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacat 6159479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 441 - 528
Target Start/End: Original strand, 21183686 - 21183779
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||      |  ||||||| ||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctc 21183779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 2477592 - 2477688
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||| ||||| |||||||||||||||||||||| ||  | |||||||||| ||||      ||||||||| ||||||||||||||||||||||||    
T  2477592 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 2477688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 475
Target Start/End: Complemental strand, 19987330 - 19987212
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattt 454  Q
    ||||||| |||||||||||| ||||||||  ||||||||||||| |||||||  ||||||||||||          || ||| ||| |||||||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgat--aatcaaaacgtatttttttaagaaaagcaatgatctatttatattt 19987233  T
Q  455 tttaaaagataaatacaaagt 475  Q
    ||| ||||||||||| |||||    
T  19987232 ttttaaagataaatataaagt 19987212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 20611888 - 20611792
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||| ||| |||||||||| ||||||||||| || |||||||||| ||  ||||      |||||||| ||||||||||||||||||||||||    
T  20611888 atgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctc 20611792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 23070889 - 23070929
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctg 23070929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 606
Target Start/End: Complemental strand, 21280393 - 21280359
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||||||||||||||||||||||||||||||||||    
T  21280393 cccatccttgagggaggcccagctcgtttgagctg 21280359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 19741230 - 19741263
Alignment:
Q  573 ccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||||    
T  19741230 ccatccttgagggaggcccagctcgtttgagctg 19741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 12083640 - 12083680
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  12083640 ttgaggcccatccttgaggaaggcccagctcgtttgagctg 12083680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 606
Target Start/End: Original strand, 13727650 - 13727689
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctg 13727689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 21479349 - 21479310
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  21479349 tgaggcccatccttgagggaggcccagctcgttttagctg 21479310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 27314773 - 27314804
Alignment:
Q  575 atccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||    
T  27314773 atccttgagggaggcccagctcgtttgagctg 27314804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 575 - 606
Target Start/End: Original strand, 27579084 - 27579115
Alignment:
Q  575 atccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||    
T  27579084 atccttgagggaggcccagctcgtttgagctg 27579115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 495
Target Start/End: Complemental strand, 30121860 - 30121803
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    ||||| |||||| ||||||||||| |||||||||| || || |||||||||| |||||    
T  30121860 atgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacat 30121803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 603
Target Start/End: Complemental strand, 33773964 - 33773928
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgag 603  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  33773964 tgaggcccatccttgagggaggcccagctcatttgag 33773928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 7162967 - 7162703
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||| |||| ||          |||||||||||||||||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtcttttttttaaaagagcgatgttctattt 7162868  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| |       |||||||||||||||||||| |||||||||| | |||||||||||||    
T  7162867 atattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacaccaaa 7162768  T
Q  543 atcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  7162767 atcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccagctcgtttgagctg 7162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 349 - 606
Target Start/End: Complemental strand, 3953188 - 3952925
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||| |||||||||||||| |||||||||||| ||| |||||||||||| ||||||||||||||||| |||         ||||| |||||||||||||    
T  3953188 cagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt-aaagaccgatgttctattt 3953090  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||||||||| ||  |||||| ||||||||||       |||||||||| |||||||| ||||||||||| |||||||||||||||    
T  3953089 atattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacaccaaa 3952990  T
Q  543 atcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3952989 atcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctg 3952925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 4506078 - 4505873
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |         ||||||| ||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 4505979  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||      | || |||||||||||||||||||||||||||| ||||||||||||||    
T  4505978 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaa 4505879  T
Q  542 aatcaa 547  Q
    ||||||    
T  4505878 aatcaa 4505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 352 - 547
Target Start/End: Complemental strand, 6965186 - 6964986
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |         ||||||| ||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa-taattttttttaaaagagcaatgttctatttata 6965088  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatc 545  Q
    ||||||||||||||||||||||||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6965087 ttttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatc 6964988  T
Q  546 aa 547  Q
    ||    
T  6964987 aa 6964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 29939781 - 29939981
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||         ||||||| |||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 29939880  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||| ||||||||||||| || |||||||||||||||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  29939881 atattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacaccaaa 29939980  T
Q  543 a 543  Q
    |    
T  29939981 a 29939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 349 - 547
Target Start/End: Original strand, 12337365 - 12337571
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttctat 446  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||           ||||||| |||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaaagagcaatgttctat 12337464  T
Q  447 ttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||||||||||||||||||||||||| || || |||||||| |||||      | ||||||||||||||||||||||||||||||| |||||||||||||    
T  12337465 ttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 12337564  T
Q  541 aaatcaa 547  Q
    |||||||    
T  12337565 aaatcaa 12337571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 3155401 - 3155196
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaa-gagcgatgttctatt 447  Q
    ||||||||||||||||||||||||||||||||| |   |||||||||||| |||||||||||| ||||| ||         ||| |||| ||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctatt 3155302  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3155301 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3155202  T
Q  542 aatcaa 547  Q
    ||||||    
T  3155201 aatcaa 3155196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 353 - 494
Target Start/End: Complemental strand, 40636317 - 40636176
Alignment:
Q  353 gccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatat 452  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||         ||||||| |||||||||||||||    
T  40636317 gccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatat 40636218  T
Q  453 tttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  40636217 tttttaaaagataaatacaaggtgtcgtatatatgcggtaca 40636176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 347 - 547
Target Start/End: Original strand, 8906994 - 8907202
Alignment:
Q  347 cccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--nnnnnnnnnaaagagcgatgttct 444  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||           ||||||  |||||||    
T  8906994 cccagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttct 8907093  T
Q  445 atttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacac 538  Q
    |||||||||||||||||||||||||||| |   ||||||||||||||||      | || ||||||||||||||||||||||| |||| |||||||||||    
T  8907094 atttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacac 8907193  T
Q  539 caaaatcaa 547  Q
    |||||||||    
T  8907194 caaaatcaa 8907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 349 - 543
Target Start/End: Original strand, 27506659 - 27506859
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||| ||| ||| |||||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaagcaatgatctattt 27506758  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||| || ||  |||||||||| |||||      | || ||||||||||| |||||||||||||||  |||||||||||||||    
T  27506759 atattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaacaccaaa 27506858  T
Q  543 a 543  Q
    |    
T  27506859 a 27506859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 352 - 542
Target Start/End: Original strand, 10762488 - 10762683
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||          ||||||| ||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgt-tttttttttaaagagcaatgttctatttata 10762586  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    |||||||||||||||||| || ||   ||||||||| |||||      | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  10762587 ttttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 10762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 348 - 543
Target Start/End: Complemental strand, 9046214 - 9046012
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||||  ||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||         ||||| | ||||||||||    
T  9046214 ccagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgtattgtttttaaaagaacaatgttctatt 9046115  T
Q  448 tata-ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||| |||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||| |    
T  9046114 tatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaa 9046015  T
Q  541 aaa 543  Q
    |||    
T  9046014 aaa 9046012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 24410623 - 24410419
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta---nnnnnnnnnaaagagcgatgttcta 445  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||            ||| | | ||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttcta 24410524  T
Q  446 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaa-cctccacctaacac 538  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||      | ||||||||||||||||||||||||||||| || |||||||||||    
T  24410523 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaacac 24410424  T
Q  539 caaaa 543  Q
    |||||    
T  24410423 caaaa 24410419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 26716313 - 26716111
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| ||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||          ||||||| ||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 26716214  T
Q  448 tata-ttttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacacca 540  Q
    |||| |||||||||||||||||| || ||  | ||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||| |    
T  26716213 tatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaa 26716114  T
Q  541 aaa 543  Q
    |||    
T  26716113 aaa 26716111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 352 - 494
Target Start/End: Complemental strand, 34694155 - 34694013
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||         ||||||| ||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata 34694056  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||    
T  34694055 ttttttaaaagataaatacaaggtgccgtatatatgtggtaca 34694013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 352 - 494
Target Start/End: Complemental strand, 34716567 - 34716425
Alignment:
Q  352 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttata 451  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||         ||||||| ||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata 34716468  T
Q  452 ttttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||    
T  34716467 ttttttaaaagataaatacaaggtgccgtatatatgtggtaca 34716425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 494
Target Start/End: Original strand, 5952642 - 5952779
Alignment:
Q  355 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattt 454  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||         ||||||| ||||| ||||  |||||    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgtattttttttaaaagagcaatgttatatt--tattt 5952739  T
Q  455 tttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||||||||| ||  |||||||||||||||||    
T  5952740 tttaaaagataaatacaaggtgccgtatatatgcggtaca 5952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 348 - 461
Target Start/End: Original strand, 1396616 - 1396730
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt-annnnnnnnnaaagagcgatgttctat 446  Q
    |||||||| ||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | |         ||||||| |||||||||    
T  1396616 ccagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 1396715  T
Q  447 ttatattttttaaaa 461  Q
    |||||||||||||||    
T  1396716 ttatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 349 - 469
Target Start/End: Complemental strand, 8327801 - 8327681
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||| |||||||| | ||||||||||||| | ||||| |||||||||||  |||||||||||||||||||||         ||| ||| ||| |||||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgtattttttttaaaaaagcaatgatctattt 8327702  T
Q  449 atattttttaaaagataaata 469  Q
    |||||||||||||||||||||    
T  8327701 atattttttaaaagataaata 8327681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 38400892 - 38400796
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacat------gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || || |||||||||| |||||      |||||||| ||||||||||||||||||||||||    
T  38400892 atgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctc 38400796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 526
Target Start/End: Original strand, 21665708 - 21665802
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacc 526  Q
    |||||||||||| |||||||||||||||||||||  || ||||||||||| | |||      |||||||||| ||||||||||||||||||||||    
T  21665708 atgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 16097102 - 16097006
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| ||  ||||||||||  ||||      | |||||||| |||||| |||||||||||||||||    
T  16097102 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctc 16097006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 28425718 - 28425814
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |  ||||||||||||||||||| || |||||||||||| ||||      |||||||||| |||||| |||| ||||||||||||    
T  28425718 atgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctc 28425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 3155068 - 3155029
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctg 3155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 6964857 - 6964818
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctg 6964818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 364 - 470
Target Start/End: Original strand, 22727391 - 22727497
Alignment:
Q  364 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatttatattttttaaaaga 463  Q
    ||||||||||||||| | |||  | ||||||||||| ||| ||||||| ||||||||         ||||| | |||||||||||| |||||||||||||    
T  22727391 gaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtattttttttaaaagaacaatgttctatttaaattttttaaaaga 22727490  T
Q  464 taaatac 470  Q
    |||||||    
T  22727491 taaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 495
Target Start/End: Original strand, 7742141 - 7742199
Alignment:
Q  438 atgttctatttatatttt-ttaaaagataaatacaaagtatcgtatatatgcggtacat 495  Q
    |||||||||||||||||| ||||||||||||||||| || || |||||||||| |||||    
T  7742141 atgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacat 7742199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 487
Target Start/End: Original strand, 16227379 - 16227425
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||    
T  16227379 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatg 16227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 12134048 - 12134144
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |   |||||||||||||||||| ||| |||||||||||| |||      | |||||||| |||||||||||||| |||||||||    
T  12134048 atgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctc 12134144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 524
Target Start/End: Original strand, 24035553 - 24035645
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaa 524  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||| ||||| |||      | |||||||| ||||||| ||||||||||||    
T  24035553 atgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 11952596 - 11952643
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatat 486  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  11952596 atgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 606
Target Start/End: Original strand, 12337689 - 12337729
Alignment:
Q  566 ttgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  12337689 ttgaggcccatccttgagggaggctcagctcgtttgagctg 12337729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 494
Target Start/End: Original strand, 13800552 - 13800608
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    |||||||||||| ||||||||||||||||||| || ||  |||||||||||| ||||    
T  13800552 atgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgataca 13800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 4505744 - 4505705
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctg 4505705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 34693212 - 34693173
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  34693212 tgaggcccatccttgagggaggcccaactcgtttgagctg 34693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 567 - 606
Target Start/End: Complemental strand, 34715624 - 34715585
Alignment:
Q  567 tgagacccatccttgagggaggcccagctcgtttgagctg 606  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  34715624 tgaggcccatccttgagggaggcccaactcgtttgagctg 34715585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 606
Target Start/End: Complemental strand, 40636022 - 40635988
Alignment:
Q  572 cccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||| |||||||||||||    
T  40636022 cccatccttgagggaggcccaactcgtttgagctg 40635988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 528
Target Start/End: Complemental strand, 37182700 - 37182668
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||| ||||||||||||||||||||||||    
T  37182700 gtgaaaatcactaccgtatacatgaggaacctc 37182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 115; Significance: 4e-58; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 349 - 547
Target Start/End: Complemental strand, 1527 - 1323
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctattt 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         |||||||  ||||||||||    
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctattt 1428  T
Q  449 atattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaa 542  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||      |  |||||||||||||||||||||||||||||| |||||||||||||||    
T  1427 atattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 1328  T
Q  543 atcaa 547  Q
    |||||    
T  1327 atcaa 1323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 1070 - 1037
Alignment:
Q  573 ccatccttgagggaggcccagctcgtttgagctg 606  Q
    ||||||||||||||||||||||||||||||||||    
T  1070 ccatccttgagggaggcccagctcgtttgagctg 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 349 - 543
Target Start/End: Complemental strand, 106723 - 106522
Alignment:
Q  349 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-nnnnnnnnnaaagagcgatgttctatt 447  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| | ||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatt 106624  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctccacctaacaccaa 541  Q
    |||||||||||||||||||||| || || |||||||||||||||||      | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  106623 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 106524  T
Q  542 aa 543  Q
    ||    
T  106523 aa 106522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 348 - 487
Target Start/End: Complemental strand, 183245 - 183106
Alignment:
Q  348 ccagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtannnnnnnnnaaagagcgatgttctatt 447  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||         |||||| |||||||||||    
T  183245 ccagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgtattttttttaaaagagagatgttctatt 183146  T
Q  448 tatattttttaaaagataaatacaaagtatcgtatatatg 487  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  183145 tatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 496 - 594
Target Start/End: Complemental strand, 181950 - 181851
Alignment:
Q  496 gtgaaaatgactaccgtatacatgaggaacctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgagacccatccttgagggaggcccagc 594  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  181950 gtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaatcaatcatgaggaacccccactcttgagacccatccttgagggaggcccagc 181851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 266 - 362
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||||||      |||||||||| |||||||||||||||| |||||||    
T  266 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctc 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 39020 - 38924
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| || ||||||||||||| |||      |||||||||| ||||||||||| ||||||||||||    
T  39020 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctc 38924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 206497 - 206593
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca------tgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| ||||| |||||||||||||||| || ||||||||||||||||||       |||||||| ||||||||||||||||||||||||    
T  206497 atgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctc 206593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 24004 - 24057
Alignment:
Q  441 ttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 494  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  24004 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtaca 24057  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 173518 - 173614
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtac------atgtgaaaatgactaccgtatacatgaggaacctc 528  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||      | || ||||| |||||||||||| |||||||||||    
T  173518 atgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 16160 - 16126
Alignment:
Q  438 atgttctatttatattttttaaaagataaatacaa 472  Q
    |||||||||||| ||||||||||||||||||||||    
T  16160 atgttctatttaaattttttaaaagataaatacaa 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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