View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0683_low_27 (Length: 331)
Name: NF0683_low_27
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0683_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 22467868 - 22467767
Alignment:
| Q |
136 |
gaactccagaagatgaaactaactcactctactcttgtgtgttttcctgaaatgaacaagttaccgttttgttgaaacgaggttgcaattttgtgttgtt |
235 |
Q |
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| T |
22467868 |
gaactccagaagatgaaactaactcactctactcttgtgtgttttcatgaaatgaacaagttaccgttttgttgaaacgaggttgcaattttgtgttgtt |
22467769 |
T |
|
| Q |
236 |
gg |
237 |
Q |
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|| |
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| T |
22467768 |
gg |
22467767 |
T |
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