View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0683_low_30 (Length: 323)

Name: NF0683_low_30
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0683_low_30
NF0683_low_30
[»] chr4 (69 HSPs)
chr4 (15-275)||(32339570-32339830)
chr4 (157-247)||(40018228-40018318)
chr4 (161-275)||(37042675-37042789)
chr4 (161-247)||(38903757-38903843)
chr4 (178-275)||(40932935-40933032)
chr4 (168-275)||(22420728-22420835)
chr4 (161-246)||(47147530-47147613)
chr4 (132-275)||(31339651-31339795)
chr4 (180-268)||(47372827-47372915)
chr4 (181-275)||(49686870-49686964)
chr4 (159-275)||(49738561-49738677)
chr4 (184-247)||(29801559-29801622)
chr4 (164-247)||(41192221-41192304)
chr4 (161-272)||(42639034-42639145)
chr4 (154-228)||(934489-934563)
chr4 (163-249)||(6843774-6843860)
chr4 (161-275)||(25755473-25755587)
chr4 (161-275)||(26024861-26024975)
chr4 (161-246)||(44686611-44686695)
chr4 (161-247)||(7681949-7682035)
chr4 (161-247)||(18966762-18966848)
chr4 (157-247)||(31403073-31403163)
chr4 (162-247)||(25574982-25575067)
chr4 (182-247)||(29209214-29209279)
chr4 (161-246)||(44667286-44667370)
chr4 (178-275)||(54470381-54470478)
chr4 (207-275)||(8284342-8284410)
chr4 (211-275)||(45209216-45209280)
chr4 (161-275)||(2557682-2557797)
chr4 (168-247)||(20105557-20105636)
chr4 (161-219)||(21879220-21879279)
chr4 (39-146)||(33709947-33710054)
chr4 (184-275)||(44719372-44719463)
chr4 (164-275)||(55388222-55388333)
chr4 (161-247)||(30853500-30853586)
chr4 (161-243)||(51841241-51841323)
chr4 (165-275)||(55007907-55008017)
chr4 (206-275)||(6957800-6957869)
chr4 (161-270)||(8598957-8599066)
chr4 (161-210)||(45569085-45569134)
chr4 (178-239)||(48154894-48154955)
chr4 (178-239)||(55028995-55029056)
chr4 (211-275)||(3979127-3979191)
chr4 (211-275)||(31959825-31959889)
chr4 (211-275)||(52569526-52569590)
chr4 (211-274)||(4441060-4441123)
chr4 (59-142)||(31961422-31961505)
chr4 (185-247)||(7970420-7970482)
chr4 (161-247)||(20999157-20999243)
chr4 (213-275)||(27450191-27450253)
chr4 (156-218)||(29182604-29182666)
chr4 (213-275)||(34585691-34585753)
chr4 (233-275)||(38017318-38017360)
chr4 (157-247)||(39761367-39761457)
chr4 (161-219)||(42293332-42293390)
chr4 (178-247)||(2589246-2589315)
chr4 (213-274)||(13262421-13262482)
chr4 (214-275)||(43434134-43434195)
chr4 (211-275)||(436436-436500)
chr4 (211-275)||(1777028-1777092)
chr4 (211-275)||(19061946-19062010)
chr4 (161-217)||(20047592-20047648)
chr4 (161-217)||(26024988-26025044)
chr4 (179-275)||(34208280-34208376)
chr4 (211-275)||(35690478-35690542)
chr4 (215-275)||(47372915-47372975)
chr4 (211-275)||(48622554-48622618)
chr4 (213-273)||(49939747-49939807)
chr4 (211-243)||(56200153-56200185)
[»] chr2 (57 HSPs)
chr2 (161-275)||(8197552-8197666)
chr2 (161-275)||(8202312-8202426)
chr2 (161-275)||(3305820-3305934)
chr2 (161-274)||(19234996-19235109)
chr2 (161-273)||(37470146-37470258)
chr2 (161-275)||(33504380-33504495)
chr2 (161-243)||(2906036-2906118)
chr2 (161-275)||(19336904-19337018)
chr2 (161-275)||(38435109-38435223)
chr2 (178-275)||(32402674-32402771)
chr2 (154-249)||(37481654-37481749)
chr2 (161-275)||(9556380-9556494)
chr2 (137-275)||(13240774-13240912)
chr2 (161-275)||(19024335-19024449)
chr2 (161-247)||(42092674-42092760)
chr2 (161-247)||(43832255-43832341)
chr2 (197-270)||(29159286-29159359)
chr2 (161-269)||(1626352-1626460)
chr2 (161-229)||(31254445-31254513)
chr2 (179-270)||(15836115-15836206)
chr2 (58-141)||(43260446-43260529)
chr2 (184-246)||(1303468-1303530)
chr2 (161-275)||(9496023-9496137)
chr2 (161-275)||(26670925-26671039)
chr2 (161-275)||(28960222-28960336)
chr2 (161-275)||(33287578-33287692)
chr2 (161-227)||(33625257-33625323)
chr2 (161-231)||(42149715-42149785)
chr2 (165-218)||(41779178-41779231)
chr2 (211-275)||(227396-227460)
chr2 (211-275)||(7326171-7326235)
chr2 (211-275)||(12474938-12475002)
chr2 (211-275)||(28508885-28508949)
chr2 (211-275)||(30306239-30306303)
chr2 (184-247)||(3481334-3481397)
chr2 (214-253)||(6841484-6841523)
chr2 (161-244)||(23915735-23915818)
chr2 (213-275)||(3635334-3635396)
chr2 (154-272)||(6230278-6230396)
chr2 (161-247)||(12141701-12141787)
chr2 (161-275)||(12882056-12882170)
chr2 (213-275)||(15025703-15025765)
chr2 (161-247)||(26784379-26784465)
chr2 (213-275)||(41197238-41197300)
chr2 (185-275)||(43573141-43573231)
chr2 (214-275)||(4807805-4807866)
chr2 (161-247)||(8491276-8491364)
chr2 (161-210)||(12026081-12026130)
chr2 (190-275)||(12734886-12734971)
chr2 (190-275)||(25834864-25834949)
chr2 (39-132)||(42092540-42092633)
chr2 (211-275)||(451659-451723)
chr2 (116-231)||(2377164-2377280)
chr2 (211-275)||(3243664-3243728)
chr2 (211-275)||(9531611-9531675)
chr2 (204-275)||(10516760-10516831)
chr2 (179-247)||(19015914-19015982)
[»] chr1 (65 HSPs)
chr1 (39-247)||(5338747-5338956)
chr1 (42-246)||(13827620-13827826)
chr1 (39-247)||(38868905-38869125)
chr1 (178-269)||(6025779-6025870)
chr1 (160-275)||(50636237-50636352)
chr1 (182-275)||(38877354-38877447)
chr1 (180-275)||(30396740-30396835)
chr1 (76-275)||(33560869-33561080)
chr1 (161-246)||(15577575-15577660)
chr1 (178-275)||(52073059-52073156)
chr1 (165-269)||(42501269-42501373)
chr1 (137-247)||(109032-109143)
chr1 (156-271)||(4590547-4590662)
chr1 (39-275)||(10569082-10569326)
chr1 (178-249)||(40920566-40920637)
chr1 (161-275)||(3818867-3818981)
chr1 (161-275)||(8796366-8796480)
chr1 (193-275)||(49377490-49377572)
chr1 (161-269)||(16822038-16822145)
chr1 (156-215)||(10584968-10585027)
chr1 (132-247)||(17233810-17233925)
chr1 (158-246)||(37591148-37591234)
chr1 (161-246)||(853825-853910)
chr1 (204-249)||(16943355-16943400)
chr1 (115-228)||(52160301-52160419)
chr1 (203-247)||(39525964-39526008)
chr1 (179-275)||(41560404-41560500)
chr1 (178-237)||(52482431-52482490)
chr1 (161-247)||(7124298-7124384)
chr1 (161-247)||(8203173-8203259)
chr1 (156-270)||(17640083-17640197)
chr1 (161-247)||(17815636-17815722)
chr1 (156-246)||(30017092-30017182)
chr1 (76-269)||(43375615-43375809)
chr1 (161-247)||(43934369-43934455)
chr1 (190-275)||(25979242-25979327)
chr1 (211-275)||(1210952-1211016)
chr1 (179-275)||(6084150-6084246)
chr1 (179-247)||(27072526-27072594)
chr1 (211-275)||(29577459-29577523)
chr1 (211-275)||(30202141-30202205)
chr1 (215-275)||(39797212-39797272)
chr1 (211-275)||(40568421-40568485)
chr1 (211-275)||(49347404-49347468)
chr1 (211-275)||(51602263-51602327)
chr1 (193-240)||(2545145-2545192)
chr1 (161-239)||(12135864-12135943)
chr1 (163-210)||(12231524-12231571)
chr1 (194-269)||(22319856-22319931)
chr1 (161-228)||(40416528-40416595)
chr1 (178-270)||(48861391-48861485)
chr1 (161-247)||(9599433-9599519)
chr1 (161-247)||(28528512-28528598)
chr1 (161-247)||(39515907-39515993)
chr1 (58-167)||(2544641-2544749)
chr1 (190-275)||(15086108-15086193)
chr1 (230-275)||(52814305-52814350)
chr1 (179-275)||(19908046-19908142)
chr1 (211-275)||(28090705-28090769)
chr1 (211-275)||(34792360-34792424)
chr1 (215-275)||(37462887-37462947)
chr1 (187-275)||(38807682-38807770)
chr1 (211-275)||(42337763-42337827)
chr1 (211-275)||(44941787-44941851)
chr1 (211-275)||(52921287-52921351)
[»] chr3 (48 HSPs)
chr3 (161-243)||(37228239-37228321)
chr3 (161-275)||(46431690-46431804)
chr3 (39-247)||(36304002-36304209)
chr3 (161-249)||(37598207-37598295)
chr3 (161-275)||(21427595-21427707)
chr3 (161-247)||(43308719-43308805)
chr3 (167-244)||(55244441-55244518)
chr3 (161-243)||(37228085-37228167)
chr3 (178-247)||(46367426-46367495)
chr3 (161-244)||(2340759-2340842)
chr3 (117-246)||(39535440-39535570)
chr3 (180-274)||(41971283-41971376)
chr3 (182-275)||(659703-659796)
chr3 (161-249)||(23534607-23534695)
chr3 (157-266)||(29337587-29337698)
chr3 (161-271)||(29475843-29475953)
chr3 (161-247)||(49841773-49841859)
chr3 (161-274)||(27893246-27893359)
chr3 (161-246)||(41425378-41425463)
chr3 (179-247)||(11284163-11284231)
chr3 (180-248)||(32052433-32052501)
chr3 (193-244)||(5852346-5852397)
chr3 (156-275)||(19758039-19758157)
chr3 (214-274)||(7942864-7942924)
chr3 (211-275)||(12096716-12096780)
chr3 (154-245)||(21200698-21200787)
chr3 (211-275)||(47555343-47555407)
chr3 (118-244)||(47789003-47789135)
chr3 (161-229)||(47804720-47804788)
chr3 (178-274)||(6988075-6988172)
chr3 (184-275)||(21862752-21862843)
chr3 (76-135)||(33307188-33307247)
chr3 (160-247)||(50237673-50237760)
chr3 (213-275)||(5169041-5169103)
chr3 (161-231)||(8476067-8476137)
chr3 (161-239)||(34719127-34719205)
chr3 (161-275)||(45289102-45289216)
chr3 (193-274)||(7278653-7278734)
chr3 (161-210)||(41452816-41452865)
chr3 (190-275)||(48508421-48508506)
chr3 (222-275)||(49503579-49503632)
chr3 (191-275)||(311320-311404)
chr3 (179-275)||(388273-388369)
chr3 (211-275)||(2133623-2133687)
chr3 (211-275)||(7895891-7895955)
chr3 (157-249)||(41842560-41842652)
chr3 (183-231)||(42026591-42026639)
chr3 (211-275)||(54128586-54128650)
[»] scaffold0180 (1 HSPs)
scaffold0180 (156-275)||(25454-25574)
[»] chr8 (48 HSPs)
chr8 (161-270)||(3645243-3645352)
chr8 (178-275)||(12611671-12611768)
chr8 (161-246)||(23023382-23023467)
chr8 (178-275)||(26055595-26055692)
chr8 (117-217)||(38689769-38689869)
chr8 (162-274)||(39760447-39760558)
chr8 (161-228)||(10108970-10109037)
chr8 (165-247)||(25117446-25117528)
chr8 (161-247)||(39967538-39967624)
chr8 (161-246)||(79184-79269)
chr8 (154-275)||(23492184-23492305)
chr8 (178-246)||(37826461-37826529)
chr8 (157-220)||(10079973-10080036)
chr8 (180-275)||(16715449-16715544)
chr8 (161-275)||(39388940-39389057)
chr8 (161-243)||(11733904-11733986)
chr8 (161-215)||(38178331-38178385)
chr8 (162-275)||(12692251-12692364)
chr8 (179-275)||(490510-490606)
chr8 (161-244)||(27037792-27037875)
chr8 (182-247)||(30748641-30748706)
chr8 (211-275)||(11523734-11523798)
chr8 (179-247)||(21425221-21425289)
chr8 (179-247)||(29520824-29520892)
chr8 (161-245)||(38391934-38392018)
chr8 (39-227)||(41971849-41972037)
chr8 (179-247)||(43904704-43904772)
chr8 (76-167)||(5908706-5908797)
chr8 (156-275)||(6483447-6483566)
chr8 (211-274)||(12491150-12491213)
chr8 (161-231)||(16705904-16705975)
chr8 (163-206)||(33666650-33666693)
chr8 (76-167)||(35914732-35914823)
chr8 (167-238)||(44175275-44175346)
chr8 (213-275)||(14742093-14742155)
chr8 (161-247)||(17491693-17491779)
chr8 (181-275)||(30198277-30198371)
chr8 (214-275)||(1928598-1928659)
chr8 (179-220)||(16917358-16917399)
chr8 (214-275)||(43733416-43733477)
chr8 (178-246)||(1549431-1549499)
chr8 (211-275)||(3464182-3464246)
chr8 (161-245)||(4011240-4011324)
chr8 (211-275)||(25473414-25473478)
chr8 (58-166)||(29700318-29700426)
chr8 (211-275)||(36545356-36545420)
chr8 (211-275)||(44529432-44529496)
chr8 (211-275)||(45419442-45419506)
[»] chr7 (55 HSPs)
chr7 (161-270)||(41483644-41483753)
chr7 (39-247)||(40008470-40008676)
chr7 (161-275)||(12966173-12966287)
chr7 (161-247)||(40138987-40139073)
chr7 (161-246)||(19262498-19262583)
chr7 (178-275)||(30914513-30914610)
chr7 (165-275)||(36245267-36245376)
chr7 (161-274)||(28627945-28628058)
chr7 (103-275)||(27893574-27893746)
chr7 (128-275)||(36101788-36101935)
chr7 (161-247)||(22174157-22174243)
chr7 (209-275)||(22349825-22349891)
chr7 (161-247)||(24549728-24549813)
chr7 (161-247)||(36239835-36239921)
chr7 (202-275)||(475974-476046)
chr7 (190-247)||(6807390-6807447)
chr7 (159-220)||(41578189-41578250)
chr7 (179-247)||(7220931-7220999)
chr7 (162-249)||(1569174-1569261)
chr7 (156-247)||(28541983-28542074)
chr7 (224-275)||(31840450-31840501)
chr7 (161-275)||(45601633-45601747)
chr7 (164-234)||(9797758-9797828)
chr7 (213-275)||(38607201-38607263)
chr7 (161-247)||(40830359-40830444)
chr7 (76-145)||(30144835-30144904)
chr7 (211-275)||(6375075-6375139)
chr7 (211-275)||(11594167-11594231)
chr7 (211-275)||(12841286-12841350)
chr7 (211-275)||(21078124-21078188)
chr7 (211-275)||(28208339-28208403)
chr7 (161-213)||(29653619-29653671)
chr7 (211-275)||(31682613-31682677)
chr7 (211-275)||(34869627-34869691)
chr7 (211-275)||(35906212-35906276)
chr7 (211-275)||(39906383-39906447)
chr7 (58-196)||(25579178-25579317)
chr7 (161-220)||(28858202-28858261)
chr7 (190-273)||(45836495-45836578)
chr7 (197-235)||(15311113-15311151)
chr7 (165-215)||(25826553-25826603)
chr7 (161-207)||(30144932-30144978)
chr7 (211-273)||(36652199-36652261)
chr7 (164-246)||(42177058-42177140)
chr7 (58-135)||(5335962-5336039)
chr7 (190-275)||(40979939-40980024)
chr7 (58-167)||(47848716-47848825)
chr7 (211-275)||(4604754-4604818)
chr7 (163-247)||(5336077-5336161)
chr7 (211-275)||(24777168-24777232)
chr7 (215-275)||(28021146-28021206)
chr7 (40-167)||(28858068-28858196)
chr7 (179-275)||(34035165-34035261)
chr7 (211-275)||(37618152-37618216)
chr7 (211-275)||(40149024-40149088)
[»] chr5 (54 HSPs)
chr5 (156-248)||(28005687-28005783)
chr5 (190-275)||(15588401-15588486)
chr5 (161-246)||(27998598-27998683)
chr5 (190-275)||(30639310-30639395)
chr5 (179-247)||(18350941-18351009)
chr5 (161-275)||(28186793-28186900)
chr5 (182-249)||(41808100-41808167)
chr5 (161-247)||(12576899-12576985)
chr5 (161-275)||(43475396-43475510)
chr5 (161-274)||(9235204-9235316)
chr5 (206-275)||(20456975-20457044)
chr5 (178-275)||(36123193-36123290)
chr5 (161-248)||(38684637-38684724)
chr5 (161-239)||(14749464-14749542)
chr5 (190-275)||(2645176-2645261)
chr5 (58-167)||(2712986-2713095)
chr5 (190-275)||(38685153-38685238)
chr5 (178-247)||(39128236-39128305)
chr5 (161-245)||(2066154-2066238)
chr5 (211-275)||(2915507-2915571)
chr5 (163-211)||(4460366-4460414)
chr5 (211-275)||(29816589-29816653)
chr5 (211-275)||(30213782-30213846)
chr5 (204-272)||(41200360-41200428)
chr5 (179-270)||(5303619-5303713)
chr5 (76-167)||(14749367-14749458)
chr5 (156-223)||(27249358-27249425)
chr5 (58-169)||(31636049-31636160)
chr5 (213-275)||(11002432-11002494)
chr5 (161-275)||(13141710-13141824)
chr5 (213-275)||(13561397-13561459)
chr5 (167-269)||(30588610-30588712)
chr5 (156-206)||(39322146-39322196)
chr5 (178-275)||(3442882-3442979)
chr5 (179-275)||(11675704-11675801)
chr5 (182-275)||(15252755-15252848)
chr5 (58-167)||(21952399-21952508)
chr5 (76-125)||(38684540-38684589)
chr5 (215-275)||(408505-408565)
chr5 (179-247)||(418073-418141)
chr5 (211-275)||(2075484-2075548)
chr5 (211-275)||(4496591-4496655)
chr5 (211-275)||(5860041-5860105)
chr5 (154-210)||(9917526-9917582)
chr5 (77-169)||(9917579-9917671)
chr5 (211-275)||(10639509-10639573)
chr5 (211-275)||(12492395-12492459)
chr5 (179-247)||(14911347-14911415)
chr5 (176-212)||(22576181-22576217)
chr5 (211-275)||(28276445-28276509)
chr5 (211-275)||(28976870-28976934)
chr5 (214-270)||(32442141-32442197)
chr5 (211-275)||(38132543-38132607)
chr5 (211-275)||(42576217-42576281)
[»] chr6 (31 HSPs)
chr6 (154-248)||(1747983-1748077)
chr6 (40-275)||(6293403-6293644)
chr6 (161-240)||(33997590-33997669)
chr6 (161-247)||(34544-34630)
chr6 (184-247)||(32945428-32945491)
chr6 (182-240)||(3963967-3964025)
chr6 (165-247)||(7150350-7150432)
chr6 (184-246)||(26676373-26676435)
chr6 (184-246)||(26677553-26677615)
chr6 (213-275)||(30789085-30789147)
chr6 (178-247)||(3210547-3210616)
chr6 (211-275)||(34143776-34143840)
chr6 (211-275)||(34156392-34156456)
chr6 (161-229)||(35199680-35199747)
chr6 (97-164)||(1747775-1747842)
chr6 (192-275)||(4245883-4245966)
chr6 (178-237)||(32515390-32515449)
chr6 (185-271)||(5096015-5096101)
chr6 (157-247)||(7267424-7267514)
chr6 (121-207)||(9749315-9749401)
chr6 (209-243)||(12237861-12237895)
chr6 (178-215)||(1747712-1747749)
chr6 (163-247)||(6906866-6906951)
chr6 (203-275)||(5897656-5897728)
chr6 (179-275)||(9706945-9707041)
chr6 (211-275)||(12890782-12890846)
chr6 (63-163)||(21870200-21870300)
chr6 (211-275)||(28085583-28085647)
chr6 (211-275)||(31819038-31819102)
chr6 (211-275)||(32756128-32756192)
chr6 (211-275)||(34934841-34934905)
[»] scaffold0373 (1 HSPs)
scaffold0373 (163-249)||(2338-2424)
[»] scaffold0392 (1 HSPs)
scaffold0392 (194-275)||(6783-6864)
[»] scaffold1318 (1 HSPs)
scaffold1318 (211-275)||(538-602)
[»] scaffold0168 (1 HSPs)
scaffold0168 (211-275)||(28900-28964)
[»] scaffold0041 (1 HSPs)
scaffold0041 (213-275)||(16787-16849)
[»] scaffold0050 (1 HSPs)
scaffold0050 (201-274)||(58238-58311)
[»] scaffold0187 (1 HSPs)
scaffold0187 (184-228)||(2943-2987)


Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 32339570 - 32339830
Alignment:
Q  15 agcagagataattatattgtgttggatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaat 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339570 agcagagataattatattgtgttggatggtggaaacttaggttaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaat 32339669  T
Q  115 tagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatg 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339670 tagatggagggtggtcaaatctctagagacagatgaacaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatg 32339769  T
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339770 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 32339830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 40018318 - 40018228
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||| |||||||| | |||||||| || ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  40018318 agaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgatccatgtag 40018228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 37042789 - 37042675
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||||||||  |||||||||||| ||| | ||| |||||||| ||||||| |||||||||||||||||| | |  | |||||    
T  37042789 aaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccgacccgactta 37042690  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  37042689 gtgggataaggcttg 37042675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 38903843 - 38903757
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||| | || |||||||| |||||||||||||||||    
T  38903843 aaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatgacataacattatggcatcgtttgatccatgtag 38903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 40933032 - 40932935
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||| | |  | |||| |||||||||||||||    
T  40933032 ctagagattaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgatgcatgtagccgaccccacttggtgggataaggcttg 40932935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 22420835 - 22420728
Alignment:
Q  168 taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggat 267  Q
    ||||||| | ||||||||||| |||||||||||||||||| || ||||||||  |||||||||| |||||||| |||||||  |  | ||||||||||||    
T  22420835 taagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcattatggcgttgtttgatctatgtagttgaccccacttagtgggat 22420736  T
Q  268 aaggcttg 275  Q
    ||||||||    
T  22420735 aaggcttg 22420728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 47147530 - 47147613
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||||||| | ||||||||||| ||||||||||||  ||||||||||||||||| |||||||| | ||||||||||||||    
T  47147530 aaactattaagaaagatctagagattaatgagttggataga--tatgatatatgatagaacattatggcattgtttgatccatgta 47147613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 275
Target Start/End: Original strand, 31339651 - 31339795
Alignment:
Q  132 aatctctagagacagatgaagaattagaaaaactat-taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcg 230  Q
    |||| |||||| |||| |||||  |||||||||||| | |||| || ||||||||||| ||||||||| || ||||| || ||||||||| |||||| ||    
T  31339651 aatcactagaggcagaggaagacctagaaaaactatatgagaattatctagagattaatgagttggatcgaaatatggtacatgatagaacattatgacg 31339750  T
Q  231 tcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| ||||||||  | |  | ||||||||||||||||||||    
T  31339751 tcgtttggtccatgtatccgaccccacttagtgggataaggcttg 31339795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 47372827 - 47372915
Alignment:
Q  180 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggata 268  Q
    ||||||||| |||||||||||| ||||| ||||| |||||| ||||||| |||||||||||||||||| | || | |||||||||||||    
T  47372827 agagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagcccatcccacttagtgggata 47372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 49686870 - 49686964
Alignment:
Q  181 gagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| ||| ||||||| ||||||||||||||| ||| ||||||||||||||||| |||||||| | |  | ||||||||||||||| ||||    
T  49686870 gagattaatgagctggatagggatatgatatatgatggaatattatggcgtcgtttgaaccatgtagccgaccccacttagtgggataagacttg 49686964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 49738677 - 49738561
Alignment:
Q  159 aaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctact 258  Q
    |||||||||||||||  | ||||| ||||| ||||||||||| | || ||||||||| |||| |||||||||  ||||||||||||||| | |  | | |    
T  49738677 aaaaactattaagaaggatctagaaattaatgagttggatagggttaggatatatgacagaacattatggcggtgtttgatccatgtagccgaccccatt 49738578  T
Q  259 tagtgggataaggcttg 275  Q
    |||||||||||||||||    
T  49738577 tagtgggataaggcttg 49738561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 29801559 - 29801622
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||| ||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||||    
T  29801559 attaatgagctggattgaaatatgatatatgattgaaaattatggcgtcgtttgatccatgtag 29801622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 41192221 - 41192304
Alignment:
Q  164 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||| |||||| | ||||||||||| |||||||||||| ||||| |||||| ||||| |||||||| ||||| |||||||||||    
T  41192221 ctataaagaaagatctagagattaatgagttggatagaaatatggtatatggtagaacattatggcttcgttcgatccatgtag 41192304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 42639145 - 42639034
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | |||| |||||| |||||||||||| ||||| ||| |||||||| ||||||||||||| | || ||||||| | |  |  ||||    
T  42639145 aaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatggcgtcgtgtaattcatgtagccaaccccgctta 42639046  T
Q  261 gtgggataaggc 272  Q
    ||||||||||||    
T  42639045 gtgggataaggc 42639034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 934563 - 934489
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatgg 228  Q
    |||||| ||||||||||||||   ||||||||||| ||||||||||| | ||||||||||||||||| |||||||    
T  934563 attagagaaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaacattatgg 934489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 6843774 - 6843860
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    |||||||||||| | ||||||||||| ||||| |||||| ||||| ||||| |||||| |||||||| | ||| |||||||||||||    
T  6843774 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtagtc 6843860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 25755473 - 25755587
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||||| || || | | |||||| ||||||||||| |||||||||||| |||||| ||||| | ||| ||||||||||| |||| || | | |||    
T  25755473 aaactattaagtaagacttggggattaatgagttggatagggatatgatatatcatagaacattatagtgtcatttgatccatgaagtcgatcccattta 25755572  T
Q  261 gtgggataaggcttg 275  Q
     ||||||||||||||    
T  25755573 atgggataaggcttg 25755587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 26024975 - 26024861
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||||||||| ||||||||| |||| ||| | |||||||||| ||||||| ||  ||| |||||||||| | |    |||||    
T  26024975 aaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctcactta 26024876  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  26024875 gtgggataaggcttg 26024861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 44686695 - 44686611
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||| |||||| | ||||||||||||||||||| || | |||||||||||||||||| ||||||| ||||||| ||| |||||    
T  44686695 aaactatcaagaaaaatctagagattaacgagttgggtaaa-atatgatatatgatagaacattatggtgtcgttttatctatgta 44686611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 7682035 - 7681949
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||| |||||| | ||| ||||||| ||||| |||||| ||||| |||||||||| | ||||| || |||||||||||||||||    
T  7682035 aaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgataggacattattgcatcgtttgatccatgtag 7681949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 18966762 - 18966848
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | ||| ||||||  ||| ||||| |||||||||||||||| | || ||||||||| |||||||| |||||||    
T  18966762 aaactattaagaaagatctacagattagtgagctggattgagatatgatatatgacaaaacattatggcgccgtttgattcatgtag 18966848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 31403163 - 31403073
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||||| |||| | |||||||||||  ||||||||||| || || |||||||||||  ||||||| || | |||||||||||||    
T  31403163 agaaaaactattatgaaagatctagagattaattagttggatagaaatgtggtatatgatagagcattatggtgttgcttgatccatgtag 31403073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 25574982 - 25575067
Alignment:
Q  162 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||||| | ||||||||||| ||||||||| || ||||| | |||||||||| ||| ||| ||  ||||||||||||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtag 25575067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 29209279 - 29209214
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||| |||||||||||| ||||| |||||||||||  |||||||||| |||||||| ||||||    
T  29209279 agattaatgagttggatagaaatatggtatatgatagagcattatggcgttgtttgatcaatgtag 29209214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 44667370 - 44667286
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||| |||||| | ||||||||||||||||||| || | |||||||||||||||||| ||| ||| ||||||| ||| |||||    
T  44667370 aaactatcaagaaaaatctagagattaacgagttgggtaaa-atatgatatatgatagaacattttggtgtcgttttatctatgta 44667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 54470381 - 54470478
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| |||||||||||| ||||| |||||||  ||  ||||| ||||| |||||||||||||| | |  | |||||||||||| |||||||    
T  54470381 ctagagattaatgagttggatagaaatatggtatatgactgagcattattgcgtcatttgatccatgtagccaaccccacttagtgggattaggcttg 54470478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 8284342 - 8284410
Alignment:
Q  207 gatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||||  ||||||||||| |||||||||| ||| | || |||||||||||||| |||||||    
T  8284342 gatatatgatagatcattatggcgtcatttgatccatatagccgatcctacttagtgggattaggcttg 8284410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 45209280 - 45209216
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||| ||||||||||||||| | |  | ||||||||||||||||||||    
T  45209280 tatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttg 45209216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 2557797 - 2557682
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaatta-tggcgtcgtttgatccatgtagtctattctactt 259  Q
    |||||||||||||  | ||  ||||||||||||||||| || ||||| | |||||||||| |||| ||| ||  |||||||||||||| | | || | ||    
T  2557797 aaactattaagaaggatctgaagattaacgagttggatcgaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactccattt 2557698  T
Q  260 agtgggataaggcttg 275  Q
    ||||||||||||||||    
T  2557697 agtgggataaggcttg 2557682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 20105636 - 20105557
Alignment:
Q  168 taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||| | ||||||||| | ||||||||  || ||||| |||||||||| | ||||||||||| ||||||||||||||    
T  20105636 taagaaagatctagagattgatgagttggactgaaatatggtatatgataggacattatggcgtcatttgatccatgtag 20105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 21879279 - 21879220
Alignment:
Q  161 aaactatt-aagaaatacctagagattaacgagttggatagagatatgatatatgataga 219  Q
    |||||||| |||||| | |||||||| || ||||||||||||||||||||||||||||||    
T  21879279 aaactattcaagaaagatctagagatgaatgagttggatagagatatgatatatgataga 21879220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 33709947 - 33710054
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    |||||||||||||  | | ||||| ||| ||||| ||||||||||| |||| |||||| ||| || ||||||| || ||| ||||||| |||| ||| ||    
T  33709947 gatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagtggatcagaaggagggtagtcagatcact 33710046  T
Q  139 agagacag 146  Q
    ||||||||    
T  33710047 agagacag 33710054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 44719463 - 44719372
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| ||||| |||||| ||| | ||||| |||||  ||||||| |||||||||||||||||| | |  ||||||||||||||||| ||||    
T  44719463 attaatgagttagatagaaatacggtatataatagagcattatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttg 44719372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 55388333 - 55388222
Alignment:
Q  164 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtg 263  Q
    ||||||||||| |  | |||||||| ||||| ||| || ||||||| |||||||||| ||| ||| ||  |||||||||||| ||| |  | ||||||||    
T  55388333 ctattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtg 55388234  T
Q  264 ggataaggcttg 275  Q
    ||||||||||||    
T  55388233 ggataaggcttg 55388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 30853500 - 30853586
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||| |||| | ||| ||||||| |||||| |||||| ||||| ||| ||| ||| ||||||  ||||||||||||||||||    
T  30853500 aaactattatgaaaaatctaaagattaatgagttgcatagaggtatgaaatacgattgaacattatgatgtcgtttgatccatgtag 30853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 51841323 - 51841241
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||||||  |  |||| ||| | ||||||||||| |||||||||||||||| || |||||||||  |||||||||||    
T  51841323 aaactattaagaaggatttagaaattcaagagttggatagggatatgatatatgatacaacattatggcggtgtttgatccat 51841241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 55007907 - 55008017
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 264  Q
    |||||||||| |  |||||||||| ||||||||  || ||||| | |||||||||  |||||| |||  |||||||||||||| | |  | |||||||||    
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgg 55008006  T
Q  265 gataaggcttg 275  Q
    |||||||||||    
T  55008007 gataaggcttg 55008017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 6957800 - 6957869
Alignment:
Q  206 tgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||| |||||||||| | |||| |||| |||||||||||||| | || | ||||||||||||||||||||    
T  6957800 tgatgtatgatagaacactatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttg 6957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 8599066 - 8598957
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||| |  |||| ||||| || ||| ||| | ||| |||||||| |||||||||||||||||| ||||||| | |  | |||||    
T  8599066 aaactattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtttgattcatgtagccgacgccactta 8598967  T
Q  261 gtgggataag 270  Q
    ||||||||||    
T  8598966 gtgggataag 8598957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 45569134 - 45569085
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgata 210  Q
    |||||||||||||| | |||||||| || |||||||||||||||||||||    
T  45569134 aaactattaagaaaaatctagagatcaatgagttggatagagatatgata 45569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 48154955 - 48154894
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 239  Q
    ||||||||||| |||||||||||| | ||||||||||| |||| |||||||| | |||||||    
T  48154955 ctagagattaatgagttggatagaaacatgatatatgacagaacattatggcattgtttgat 48154894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 55028995 - 55029056
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 239  Q
    ||||||||||| ||| | |||||| ||||| |||||||||||| ||||||||||| ||||||    
T  55028995 ctagagattaatgagctagatagaaatatgttatatgatagaacattatggcgtcatttgat 55029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 3979127 - 3979191
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||| |||  |||||||||||||| ||| || || |||||||||||||||||    
T  3979127 tatgatagaacattatgacgtaatttgatccatgtagcctactccacatagtgggataaggcttg 3979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 31959889 - 31959825
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  31959889 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31959825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 52569590 - 52569526
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  52569590 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52569526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 4441060 - 4441123
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||||    
T  4441060 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 31961505 - 31961422
Alignment:
Q  59 ggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagag 142  Q
    |||| ||||||||| | |||||||||| ||| |||||| |||  ||||||||| ||||||||||| |  |||||||| ||||||    
T  31961505 ggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggagaggagtcaaatcactagag 31961422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 7970482 - 7970420
Alignment:
Q  185 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||| ||||| |||||| ||||  ||||||||| || ||||||| ||||||||||||||||||    
T  7970482 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 7970420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 20999157 - 20999243
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | |||||| |||| |||||| ||| | |||||  ||||| ||||  |||||| ||||||||||||| |||||    
T  20999157 aaactattaagaaagatctagagtttaatgagttgaataaatatatggcatatggtagagcattatgacgtcgtttgatccttgtag 20999243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 27450253 - 27450191
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  27450253 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 27450191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 29182604 - 29182666
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatag 218  Q
    |||| ||||||||||||| || ||||||||||| ||||||||| || || | |||||||||||    
T  29182604 tagagaaactattaagaagtatctagagattaatgagttggatggatatgtcatatatgatag 29182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 34585691 - 34585753
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| || ||||||||||| ||||||||||||||  ||  | ||||||||||||||||||||    
T  34585691 tgataaaacattatggcgtcatttgatccatgtagcttaacccacttagtgggataaggcttg 34585753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 38017318 - 38017360
Alignment:
Q  233 gtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||||||| | || ||||||||||||||||||||||    
T  38017318 gtttgatccatgtagccgatcctacttagtgggataaggcttg 38017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 39761457 - 39761367
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||| || |  | |||||||||||| |||| ||||||||| |||| ||| |||||| || |||| ||| ||||||| ||||||    
T  39761457 agaaaaactatttagcacaatctagagattaacaagttagatagagatgtgatgtataatagaacatcatggtgtcctttgatctatgtag 39761367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 42293390 - 42293332
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgataga 219  Q
    |||||||||||||| | ||||| ||||| ||||| |||||| ||||| |||||||||||    
T  42293390 aaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgataga 42293332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 2589246 - 2589315
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||| |||||||||  | ||||| | | |||||||| | |||||||||||||||| |||||||    
T  2589246 ctagagattaatgagttggatgaaaatatggtttttgatagaacactatggcgtcgtttgattcatgtag 2589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 13262421 - 13262482
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    |||||||||| |||| ||||||||||| ||||||| | | || |||||||| ||||||||||    
T  13262421 tgatagaaaactatgacgtcgtttgattcatgtagccgactccacttagtgtgataaggctt 13262482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 43434134 - 43434195
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| | || |||||| |||||||||||||||| |  | ||||||||||||||||||||    
T  43434134 gatagaacactacggcgtcatttgatccatgtagtcgagcccacttagtgggataaggcttg 43434195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 436436 - 436500
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  436436 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 1777092 - 1777028
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||    
T  1777092 tatgatagaacagtatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 1777028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 19062010 - 19061946
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | || |||||||||||||||||    
T  19062010 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacctagtgggataaggcttg 19061946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 20047592 - 20047648
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgata 217  Q
    ||||||||||  || | ||||||||||| ||||||||||||||||| | ||||||||    
T  20047592 aaactattaaagaagatctagagattaatgagttggatagagatatcaaatatgata 20047648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 26025044 - 26024988
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgata 217  Q
    |||||||||||||| | ||||||||||| ||||||||| |||| ||| | |||||||    
T  26025044 aaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgata 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34208376 - 34208280
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||  | ||||| | |||||||||| |||||||||   ||||||||||||| || |  |  |||| ||||||||||||||    
T  34208376 tagagattaatgagttggatccaaatatggtttatgatagaacattatggcgcaatttgatccatgtactcgaccccccttattgggataaggcttg 34208280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 35690478 - 35690542
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| ||||    
T  35690478 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 35690542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 47372915 - 47372975
Alignment:
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| |||||| | |||| |||||||||||| | |  ||||||||||||||||||||||    
T  47372915 atagaacattatgacatcgtctgatccatgtagccgaccctacttagtgggataaggcttg 47372975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 48622618 - 48622554
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| ||| |||||||||| | |  | ||||||||||||||||||||    
T  48622618 tatgatagaacactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttg 48622554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 49939807 - 49939747
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggct 273  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||    
T  49939807 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 49939747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 56200153 - 56200185
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||| ||||||||||||||||||||||    
T  56200153 tatgatagaacattatggcgtcgtttgatccat 56200185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 8197666 - 8197552
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | |  |||||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8197567  T
Q  261 gtgggataaggcttg 275  Q
    ||||||||| |||||    
T  8197566 gtgggataatgcttg 8197552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 8202426 - 8202312
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | |  |||||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8202327  T
Q  261 gtgggataaggcttg 275  Q
    ||||||||| |||||    
T  8202326 gtgggataatgcttg 8202312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 3305934 - 3305820
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||| |||||||| |||||||||||||||||||||| ||| |||||||| | ||||| |||||||||||||||||||||| ||||  || | ||||     
T  3305934 aaactataaagaaatatctagagattaacgagttggatatagaaatgatatacggtagaacattatggcgtcgtttgatccatatagtggatcccacttt 3305835  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  3305834 gtgggataaggcttg 3305820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 19235109 - 19234996
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||| ||||| | ||||||||||| || ||||||||| ||||| ||| |||||||| ||| || |||||||| |||||||||| | | || |||||    
T  19235109 aaactattgagaaagatctagagattaatgatttggatagaaatatggtatttgatagaacattctgtcgtcgtttaatccatgtagccaactccactta 19235010  T
Q  261 gtgggataaggctt 274  Q
    ||||||||||||||    
T  19235009 gtgggataaggctt 19234996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 37470258 - 37470146
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||| || | | ||||||||||| ||||||||| || |||||  ||||||||||| ||||||| || |||||||||||||||   || | |||||    
T  37470258 aaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagctaatcccactta 37470159  T
Q  261 gtgggataaggct 273  Q
    |||||||||||||    
T  37470158 gtgggataaggct 37470146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 33504380 - 33504495
Alignment:
Q  161 aaactattaagaaatacctagagatt-aacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactt 259  Q
    |||||||||||||| | ||||||||| ||  |||||||| || ||||| |||||||||||| ||||||||||  |||||||||| ||| | |  | ||||    
T  33504380 aaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccactt 33504479  T
Q  260 agtgggataaggcttg 275  Q
    ||||||||||||||||    
T  33504480 agtgggataaggcttg 33504495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 2906118 - 2906036
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||||||| |  ||||||| || |||||||||| ||| ||| |||||||||||| ||||||| ||||||||||||||    
T  2906118 aaactattaagaaaaatgtagagatcaatgagttggataaagaaatgttatatgatagaatattatggtgtcgtttgatccat 2906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 19337018 - 19336904
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||| |||||| |  |||||||||| ||||||||| || ||||| | |||||||||| ||||||||||  |||||||||||||| | || | |||||    
T  19337018 aaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaatcccactta 19336919  T
Q  261 gtgggataaggcttg 275  Q
     |||||||| |||||    
T  19336918 ttgggataaagcttg 19336904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 38435109 - 38435223
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||||||||| | ||||||| || || || | |||||| ||| ||||||||||  |||||||||||||| | || | |||||    
T  38435109 aaactattaagaaagatctagagattaatgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatccatgtagccgatcccactta 38435208  T
Q  261 gtgggataaggcttg 275  Q
    |||| ||||||||||    
T  38435209 gtggcataaggcttg 38435223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 32402674 - 32402771
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| |||||||||||| ||| | |||||||||||| |||||||  || ||||||||| |||| | || || |||||||||||||| ||||    
T  32402674 ctagagattaatgagttggatagaaataaggtatatgatagaacattatggtttcatttgatccacgtagacgatcctgcttagtgggataagacttg 32402771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 37481749 - 37481654
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    |||||| |||||||||||||| | |||| ||| || |||||||||| | ||||| ||| |||||||||||||||| ||| |||||| ||| |||||    
T  37481749 attagagaaactattaagaaagatctagcgataaatgagttggataaaaatatggtatttgatagaaaattatggtgtcttttgattcatctagtc 37481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 9556494 - 9556380
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | |||| |||||| |||||||||  ||||||| | |||||||||| |||| || ||  |||||| ||||||| | | || |||||    
T  9556494 aaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaacattagggtgtaatttgatacatgtagccgactccactta 9556395  T
Q  261 gtgggataaggcttg 275  Q
    ||||||| |||||||    
T  9556394 gtgggatgaggcttg 9556380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 275
Target Start/End: Complemental strand, 13240912 - 13240774
Alignment:
Q  137 ctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgttt 236  Q
    |||||| |||| |||||  ||||||||||||||||||| | |||||||||||||||||| || || || || | ||||||| |  |||||| ||| ||||    
T  13240912 ctagaggcagaggaagacctagaaaaactattaagaaagatctagagattaacgagttgaatcgaaatttggtttatgataaaccattatgccgttgttt 13240813  T
Q  237 gatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| ||| | | |  |  |||||||||||||||||||    
T  13240812 gatccgtgtcgccgacccagcttagtgggataaggcttg 13240774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 19024335 - 19024449
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||| ||||||| |||||||||| | |||  |||| ||||||||  |||||||||||||||||| || ||| | |  | ||| |    
T  19024335 aaactattaagaaagatctaaagattaatgagttggatataaatacaatatttgatagaactttatggcgtcgtttgatctatatagccgaccccactca 19024434  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  19024435 gtgggataaggcttg 19024449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 42092674 - 42092760
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| ||| |  ||||||||||  |||||||||| |||| |||||||||||||  ||| |||||| |||||||||||||||    
T  42092674 aaactattaaaaaagatgtagagattaattagttggatagtgatacgatatatgatagaggattgtggcgttgtttgatccatgtag 42092760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 43832255 - 43832341
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||  | ||||||||||| ||||||||||  |||||||| ||| |||||| |||||| || | ||||||||||||||    
T  43832255 aaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaacattatgacggcatttgatccatgtag 43832341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 29159286 - 29159359
Alignment:
Q  197 atagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 270  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||||  | |||||| |||| ||||||||    
T  29159286 atagaaatatgatatttgataaaatattatggcgtcgtttgatccatgtatccgattctatttagcgggataag 29159359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 1626352 - 1626460
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||||||||| |||||| ||| | ||||||||||| |||||| |||    ||| ||||||||||||| | | || |||||||    
T  1626352 aaactattaagaaagatctagagattaatgagttgtataaaaatatgatatataatagaacattgcaacgttgtttgatccatgtggccgatcctactta 1626451  T
Q  261 gtgggataa 269  Q
    |||| ||||    
T  1626452 gtggtataa 1626460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 31254445 - 31254513
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 229  Q
    |||||||||||||| | ||||||||||| |||||| ||||| ||||||| ||||| |||| ||||||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgatttatgacagaacattatggc 31254513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 15836115 - 15836206
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 270  Q
    ||||||||||||||||||||||||||||||||| |||| | |  |||||  || ||||| ||||||||| | |  | |||||||||||||||    
T  15836115 tagagattaacgagttggatagagatatgatatctgattggacgttatgttgttgtttggtccatgtagccgaccccacttagtgggataag 15836206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 43260446 - 43260529
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctaga 141  Q
    ||||| ||||||||| || ||| ||||| ||| |||||||||| |||||||||  || ||||||||||| |||||||| |||||    
T  43260446 aggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatggagggtagtcaaatcactaga 43260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 1303530 - 1303468
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  1303530 attaatgagttggatagggatatgctatattatagaatattatggcggcatttgatccatgta 1303468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 9496023 - 9496137
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||| ||||| |  ||||| |||| |||||||||  | ||||| | |||||||||| ||||||||||  |||||||||||||| | |  | |||||    
T  9496023 aaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaaccccactta 9496122  T
Q  261 gtgggataaggcttg 275  Q
    |||||| ||||||||    
T  9496123 gtgggacaaggcttg 9496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 26670925 - 26671039
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| |  |||||||||| ||||||||   | ||||||| |||||||||| || |||| ||  |||||||||||||| | |  || ||||    
T  26670925 aaactattaagaaagatttagagattaatgagttggaccaaaatatgatttatgatagaatataatggtgtaatttgatccatgtagccgacactgctta 26671024  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||| ||||    
T  26671025 gtgggataagacttg 26671039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 28960336 - 28960222
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||| |||||||  | |||||||| || |||||||| | ||||||| | | |||||||  | ||||| |||||||||| ||||||||| | || | |||    
T  28960336 aaactgttaagaaggatctagagataaatgagttggagaaagatatggtttttgatagagcactatggtgtcgtttgattcatgtagtcgactccattta 28960237  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  28960236 gtgggataaggcttg 28960222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 33287578 - 33287692
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||| ||||| ||||| ||| || ||||| | |||||||||| |||||| | | ||||||||| ||||| | | || |||||    
T  33287578 aaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaactccactta 33287677  T
Q  261 gtgggataaggcttg 275  Q
    |||||| ||| ||||    
T  33287678 gtgggacaagacttg 33287692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 33625323 - 33625257
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 227  Q
    |||||||||||||||| ||||||||||| |||||||| ||  ||||| | |||||||||| ||||||    
T  33625323 aaactattaagaaatatctagagattaatgagttggaaagtaatatggtttatgatagaacattatg 33625257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 42149785 - 42149715
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 231  Q
    |||||||||||||| | ||||||||||  ||| |||||||| ||||| | |||||||||| ||||||||||    
T  42149785 aaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatggcgt 42149715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 41779231 - 41779178
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatag 218  Q
    |||||| ||| | ||||||||||| |||||| ||||||||||||||||||||||    
T  41779231 tattaaaaaagatctagagattaatgagttgaatagagatatgatatatgatag 41779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 227396 - 227460
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  227396 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 227460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 7326235 - 7326171
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  7326235 tatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 7326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 12475002 - 12474938
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  12475002 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 28508885 - 28508949
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  28508885 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 30306239 - 30306303
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  30306239 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3481334 - 3481397
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||| ||||||| ||| ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  3481334 attaacaagttggacagaaatatggtctatgatagaacattatggcgtaatttgatccatgtag 3481397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 6841523 - 6841484
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctatt 253  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  6841523 gatagaacattatggcgtcgtttgatccgtgtagtctatt 6841484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 23915818 - 23915735
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 244  Q
    |||||||||||||| | ||||||||||| ||| |||| |||  |||| | |||||||||| | ||||||||  |||||||||||    
T  23915818 aaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttgatccatg 23915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 3635396 - 3635334
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  3635396 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 3635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 6230396 - 6230278
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 253  Q
    |||||| |||||||||||||| | ||||||||||  || || ||||   ||||| ||||||||| || |||||  | | |||||||| |||||| ||| |    
T  6230396 attagagaaactattaagaaaaatctagagattattgaatttgatatgaatatggtatatgataaaatattataacattgtttgatctatgtagcctact 6230297  T
Q  254 ctacttagtgggataaggc 272  Q
    | | |||||||||||||||    
T  6230296 ccatttagtgggataaggc 6230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 12141701 - 12141787
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||| |||| || |||||||||| || ||||||  | ||||| |||||||||||| |||||||| |  ||||||| ||||||    
T  12141701 aaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatggcatgatttgatcgatgtag 12141787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 12882170 - 12882056
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||| || ||||||  ||||| |||| |||||||||  | ||||| | | |||||||| ||| ||||||  |||||||||||||| |||    |||||    
T  12882170 aaactactaggaaatatttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagcctacctcactta 12882071  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  12882070 gtgggataaggcttg 12882056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 15025703 - 15025765
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | |||||| ||||||||| ||||||| | || | ||||||||||||||||||||    
T  15025703 tgatagaacactatggcatcgtttgattcatgtagccgatgcaacttagtgggataaggcttg 15025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 26784465 - 26784379
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| |  |||||||||| |||||| ||||| ||||| ||||||||| || ||| |||  |  ||||||||||||||    
T  26784465 aaactattaagaaagatatagagattaatgagttgaatagaaatatggtatatgataaaacattttggtttaatttgatccatgtag 26784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 41197300 - 41197238
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| ||||||||||| |||||||||||||||| |  | ||||  ||||||||||||||    
T  41197300 tgatagaacattatggcgtcatttgatccatgtagtcgaccccacttgatgggataaggcttg 41197238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 43573231 - 43573141
Alignment:
Q  185 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||| |||||||||  | ||||||| |||||| |||  |||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  43573231 ttaatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 43573141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 4807805 - 4807866
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  4807805 gatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 4807866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 8491276 - 8491364
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatat--atgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| |  ||||| ||||| | |||||| || |||||||||  ||||||||| |||||| ||| ||||||| |||||||    
T  8491276 aaactattaagaaagatttagaggttaacaatttggattgaaatatgatatatatgatagaacattatgacgttgtttgatacatgtag 8491364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 12026130 - 12026081
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgata 210  Q
    |||||||||||||| | ||||||||||| ||||| |||||| ||||||||    
T  12026130 aaactattaagaaagatctagagattaatgagtttgatagaaatatgata 12026081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 12734886 - 12734971
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | ||||| ||  |||||||||||||||| |  | ||||||||||||||||||||    
T  12734886 gagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttg 12734971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 25834864 - 25834949
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | | ||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  25834864 gagttggatccaaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 42092540 - 42092633
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaa 132  Q
    |||||| |||||| || | ||||||| ||||||| | |||||||| | ||| |||| | ||| |||||||||  |||||||||||||| |||||    
T  42092540 gatggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagggtagtcaa 42092633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 451723 - 451659
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||| ||||||||    
T  451723 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttg 451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 2377164 - 2377280
Alignment:
Q  116 agatggagggtggtcaaatctctagagacagatgaaga-attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatg 214  Q
    ||||||||| | |||| ||| |||||||||||||||||  | ||| |||||||||| ||| |  |||||| ||| |||||||||  |  |||| ||||||    
T  2377164 agatggaggatagtcagatcactagagacagatgaagacctaagataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatg 2377263  T
Q  215 atagaaaattatggcgt 231  Q
    |||||| ||||| ||||    
T  2377264 atagaacattatagcgt 2377280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 3243728 - 3243664
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| ||||||||| |||| | |  | ||||||||||||||||||||    
T  3243728 tatgatagaacactatggcgtcatttgatccaggtagccgaccccacttagtgggataaggcttg 3243664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 9531675 - 9531611
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| ||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  9531675 tatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 9531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 10516831 - 10516760
Alignment:
Q  204 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct-acttagtgggataaggcttg 275  Q
    |||||| ||||||| || ||||||||||  |||||||||||||| ||  ||| ||||||||||||||||||||    
T  10516831 tatgatttatgataaaatattatggcgtaatttgatccatgtag-ctgatctcacttagtgggataaggcttg 10516760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 19015914 - 19015982
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||| || ||||| ||| ||||||||| ||| | |||| | |||||||||||||||||    
T  19015914 tagagattaatgagtcgggtagaggtatcatatatgattgaacaatatgacatcgtttgatccatgtag 19015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 247
Target Start/End: Original strand, 5338747 - 5338956
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    ||||||||||||| || | ||||| |||||||||   |||||||||||||| ||| || ||| |||||||||  || ||||||||| |  ||| ||| ||    
T  5338747 gatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatggaggatattcagatcact 5338846  T
Q  139 agagacagatgaagaattagaaaaactatta-agaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 237  Q
    |||| |||| | |||  |||||||||||| | ||||| | ||||||||||| ||||||||| || || |||| ||| |||||| ||||||||||  ||||    
T  5338847 agaggcagaagtagacctagaaaaactataagagaaagatctagagattaatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttg 5338946  T
Q  238 atccatgtag 247  Q
    ||||||||||    
T  5338947 atccatgtag 5338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 13827826 - 13827620
Alignment:
Q  42 ggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctaga 141  Q
    ||||||||||  ||||||||| ||||| ||| | |||||||||  ||| |||||| ||| |||||||||  || | |||||   | |||| ||| |||||    
T  13827826 ggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatggaacatagtcagatcactaga 13827727  T
Q  142 gacagatgaagaattagaaaaactattaagaaatac--ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 239  Q
    | |||| |||||  ||||||||||||||||||| |   ||||||||||| |||||||||||| ||||| |||||||||||| |||||| ||| |||| ||    
T  13827726 ggcagaggaagacctagaaaaactattaagaaaaaagtctagagattaatgagttggatagaaatatggtatatgatagaacattatgacgttgtttcat 13827627  T
Q  240 ccatgta 246  Q
    | |||||    
T  13827626 ctatgta 13827620  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 247
Target Start/End: Original strand, 38868905 - 38869125
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    |||||||||||||  | | ||||| ||||||||| | ||||||| ||  || |||||| |||  ||||||||  |||||||||||||| ||||||||  |    
T  38868905 gatggtggaaactcggcttaggtggtttgggcatgtagagagaacactagtagattctctagcgaggagagtagattagatggagggtagtcaaatcatt 38869004  T
Q  139 agagacagatgaagaattagaaaaactat------------taagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattat 226  Q
    |||| |||| |||||  ||||||||||||            ||||||| | |||| |||||| | |||||||||| ||||| |||||||||||| |||||    
T  38869005 agaggcagaagaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatatggtatatgatagaacattat 38869104  T
Q  227 ggcgtcgtttgatccatgtag 247  Q
    |||||||||||||||||||||    
T  38869105 ggcgtcgtttgatccatgtag 38869125  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 6025779 - 6025870
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataa 269  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||| || |||||||| |||||||||||||| | |||| ||||||||||||||    
T  6025779 ctagagattaatgagttggatagaaatatggtatctgatagaacatgatggcgtcatttgatccatgtagccgattccacttagtgggataa 6025870  T

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Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 50636237 - 50636352
Alignment:
Q  160 aaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactt 259  Q
    ||||||||||||| | | ||||||||||  |||||||||| | ||||| |||||||||||  |||||| | || ||||||| |||||||| |||||||||    
T  50636237 aaaactattaagataaatctagagattattgagttggataaaaatatggtatatgatagagcattatgacatcatttgatcaatgtagtcgattctactt 50636336  T
Q  260 agtgggataaggcttg 275  Q
    || |||||||||||||    
T  50636337 agcgggataaggcttg 50636352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 38877447 - 38877354
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||||||||||| |||||  |||| ||||||| ||||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  38877447 agattaacgagttggatagggatatagtatacgatagaacattatggcgtcatttgatccatgtagccgaacccacttagtgggataaggcttg 38877354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 30396835 - 30396740
Alignment:
Q  180 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||| | |||||||||| ||||| | |  | ||||||||||||||||||||    
T  30396835 agagattaatgagttggatagggatacgatatatgatagaacattatggtggcgtttgatccgtgtagccaaccccacttagtgggataaggcttg 30396740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 33561080 - 33560869
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaa------------aaa 163  Q
    |||||||||||||| |||||| ||| |||||||||  ||  |||||||||| |||||||| |||||| |||| ||||   |||||            |||    
T  33561080 gagagaagacctgtagattctgtagtaaggagagtagatatgatggagggtagtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaa 33560981  T
Q  164 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtg 263  Q
    |||||||| || | |||||||||| ||||||||||| | ||||| ||||| | |||| |||||| | | ||||||||||||||| | |  ||||||||||    
T  33560980 ctattaagtaagatctagagattagcgagttggatataaatatggtatatcagagaacattatgacattgtttgatccatgtagccaaccctacttagtg 33560881  T
Q  264 ggataaggcttg 275  Q
    ||||||||||||    
T  33560880 ggataaggcttg 33560869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 15577575 - 15577660
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||||||  |  |||||||||| |||||||||||||||||||||| |||||||| ||||| | || ||||||||||||||    
T  15577575 aaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaacattattgtgttgtttgatccatgta 15577660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 52073156 - 52073059
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||| || ||||||||||||| | |  | |||| |||||||||||||||    
T  52073156 ctagagattaatgagctggatagggctatgatatatgatagaacattatggcggcgattgatccatgtagccgaccccacttggtgggataaggcttg 52073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 42501269 - 42501373
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 264  Q
    |||||||||| | ||| ||||||| |||||||||||| |||||  ||||||||||| ||||  ||||||||| |||||||||| | |  |||||||||||    
T  42501269 tattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgtagccgaccctacttagtgg 42501368  T
Q  265 gataa 269  Q
    |||||    
T  42501369 gataa 42501373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 109143 - 109032
Alignment:
Q  137 ctagagacagatgaagaattagaaaaactatta-agaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtt 235  Q
    ||||||||| ||| |||  |||||||||||| | ||||| |  |||| ||||| |||||||||| | ||||||| |||||||||| ||||||||||| ||    
T  109143 ctagagacatatgtagacctagaaaaactataagagaaagatatagacattaatgagttggataaatatatgatgtatgatagaacattatggcgtcatt 109044  T
Q  236 tgatccatgtag 247  Q
    ||||||||||||    
T  109043 tgatccatgtag 109032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 4590662 - 4590547
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 255  Q
    ||||||||||||||||||| |  || ||||| | |||||||||||| ||||||||| |||||||| | ||||| ||  |||||||||||||| | |  |     
T  4590662 tagaaaaactattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaacaatatggtgtaatttgatccatgtagccgacccc 4590563  T
Q  256 acttagtgggataagg 271  Q
    ||||||||||||||||    
T  4590562 acttagtgggataagg 4590547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 275
Target Start/End: Complemental strand, 10569326 - 10569082
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    ||||||| |||||| | | ||||| ||||||||| | |||||||||||||| |||||| ||| | |||| ||  ||||||||||||||  ||||||| ||    
T  10569326 gatggtgaaaacttggcttaggtggtttgggcatgtagagagaagacctgtagattctgtagtacggagggtagattagatggagggtaatcaaatcact 10569227  T
Q  139 agagacagatg--------aagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcg 230  Q
    |||| |||| |        || ||| | | |||||||||||||| | |||||||||||  || |||||||| ||||  |||||||||||| |||||        
T  10569226 agaggcagaggaacacaaaaaaaataaaagaaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattataata 10569127  T
Q  231 tcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    || |||||||||||||| |  ||| |||||  |||||||||||||    
T  10569126 tcatttgatccatgtagccggttccacttaaagggataaggcttg 10569082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 40920637 - 40920566
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||||||| |||||||||||| ||||| |||||||||||| ||||||| ||| |||||| |||||||||    
T  40920637 ctagagattaatgagttggatagaaatatggtatatgatagaatattatggtgtcttttgattcatgtagtc 40920566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 3818981 - 3818867
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| |  |||||||||| |||||| ||||| ||||| | |||||| ||| |||||| || | |||||||||||||| | | |  |||||    
T  3818981 aaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatgtcgccatttgatccatgtagccgactgcactta 3818882  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  3818881 gtgggataaggcttg 3818867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 8796366 - 8796480
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||| ||||| || |||||| || ||||| | |||||||||| ||||||||||  ||| |||||||||| | |  | |||||    
T  8796366 aaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccccactta 8796465  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  8796466 gtgggataaggcttg 8796480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 49377490 - 49377572
Alignment:
Q  193 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| || |||||||||||||||| |||||||||  ||||||||||||||| | | || | ||||||||||||||||||    
T  49377490 ttggatagggaaatgatatatgatagaacattatggcggtgtttgatccatgtagccgactccagttagtgggataaggcttg 49377572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 16822145 - 16822038
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||| ||||||| |  |||||||||| ||| ||||||| ||||||||||||||| ||| ||||||||| | |||| ||||||||||| |  | |||||    
T  16822145 aaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatgattgaacattatggcggc-tttggtccatgtagtcgaccccactta 16822047  T
Q  261 gtgggataa 269  Q
    |||||||||    
T  16822046 gtgggataa 16822038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 10585027 - 10584968
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatga 215  Q
    ||||||||||||||||||| | | ||||||||| |||||||| |||||||||||||||||    
T  10585027 tagaaaaactattaagaaagatccagagattaatgagttggacagagatatgatatatga 10584968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 17233925 - 17233810
Alignment:
Q  132 aatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 231  Q
    |||| |||||| |||| |||||  ||||||||||||||||||| | | || |||||  |||||||||||  ||||| |||||||||||  |||||| |      
T  17233925 aatcactagaggcagaggaagacctagaaaaactattaagaaagatccagcgattattgagttggataggaatatggtatatgatagagcattatgtcag 17233826  T
Q  232 cgtttgatccatgtag 247  Q
    ||||||||||||||||    
T  17233825 cgtttgatccatgtag 17233810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 37591148 - 37591234
Alignment:
Q  158 gaaaaactattaagaaatac-ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||||   ||||| ||||||| ||||||  |||||||||||||||||    
T  37591148 gaaaaactattaagaaaaaatctagagattaatgagttggatagagat---atataagatagaacattatgatgtcgtttgatccatgta 37591234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 853910 - 853825
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||||||  | ||||||||||  ||||||||||| || ||||||||||||||||  ||||||||  |||| |||||||||    
T  853910 aaactattaagaaggatctagagattagtgagttggatagggacatgatatatgatagaacgttatggcggagtttcatccatgta 853825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 16943355 - 16943400
Alignment:
Q  204 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  16943355 tatgatatatgatagaacattatggcggcgtttgatccatgtagtc 16943400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 52160419 - 52160301
Alignment:
Q  115 tagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactatta-agaaat----acctagagattaacgagttggatagagatatgat 209  Q
    |||||||||||| |||||||| |||||| || |||||||   ||||||||||| | |||||     | ||||| ||||||||||| |||||| |||||||    
T  52160419 tagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatctagaaattaacgagtttgatagaaatatgat 52160320  T
Q  210 atatgatagaaaattatgg 228  Q
    ||||||||||| |||||||    
T  52160319 atatgatagaatattatgg 52160301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 39525964 - 39526008
Alignment:
Q  203 atatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||    
T  39525964 atatgatagatgatagaatattatggcgtcgtttgatccatgtag 39526008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 41560404 - 41560500
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||  | |||||   |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  41560404 tagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 41560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 52482490 - 52482431
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 237  Q
    ||||||||||| |||||||| || ||||||||||||||| ||| ||||||||| ||||||    
T  52482490 ctagagattaatgagttggacagggatatgatatatgatggaacattatggcggcgtttg 52482431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 7124298 - 7124384
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||| ||||| | |||  |||||| || ||||||||| ||||| |||| ||||||  ||||||| ||||||||||||||||||    
T  7124298 aaactattgagaaagatctattgattaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgatccatgtag 7124384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 8203259 - 8203173
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| ||| | ||||||||||| ||||||||  ||| ||||||| | ||||||| |||||||||| | || ||||||||||    
T  8203259 aaactattaaaaaagatctagagattaatgagttggacggaggtatgatagaagatagaacattatggcgttgatttatccatgtag 8203173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 17640197 - 17640083
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 255  Q
    |||||||||||| | |||  | ||||||||||| |||||||||| | ||||    | | |||||| |||||||||||||||||| ||||| ||| || |     
T  17640197 tagaaaaactataaggaaggatctagagattaatgagttggataaaaatattgcttgtaatagaacattatggcgtcgtttgattcatgttgtcaatcca 17640098  T
Q  256 acttagtgggataag 270  Q
    |||||||||||||||    
T  17640097 acttagtgggataag 17640083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 17815636 - 17815722
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||| ||||| | |||| |||| | ||||| |||||| ||||| |||||||||||  ||| ||| ||||||||||||||||||    
T  17815636 aaactatttagaaagatctagtgattgatgagttagatagaaatatggtatatgatagagcattttggtgtcgtttgatccatgtag 17815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 30017182 - 30017092
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||||| ||||  ||| ||||||| ||||| ||||| ||||||||||  ||||  || |||| ||||||| |||||||||||||||||    
T  30017182 tagaaaaaccattagtaaagacctagatattaatgagttagatagagataccatatccgacagaacattatggtgtcgtttgatccatgta 30017092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 269
Target Start/End: Complemental strand, 43375809 - 43375615
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaa-aactattaagaaa 174  Q
    |||||||||||| | |||| | ||| || ||||||  || |||||| || | || ||||| |||||| |||| | |||  |||||| |||||||||||||    
T  43375809 gagagaagacctatagattatgtagtaaagagagtagatcagatggtggatagtaaaatcactagaggcagagggagacctagaaataactattaagaaa 43375710  T
Q  175 tacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataa 269  Q
     |  |||||||||| ||||||||  || ||||| |  ||||||||| |||||| | |  |||||||||||||| | || | ||||||||||||||    
T  43375709 gatttagagattaatgagttggaccgaaatatggttcatgatagaacattatgacataatttgatccatgtagccaatcccacttagtgggataa 43375615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 43934455 - 43934369
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||  | ||| | |||||  ||||||| || ||||||||| ||||||||| ||||||||| |||||| |||||||||    
T  43934455 aaactattaagaaggatctacaaattaattagttggaaagggatatgatagatgatagaacattatggcggcgtttgttccatgtag 43934369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 25979327 - 25979242
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  25979327 gagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 1210952 - 1211016
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  1210952 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 1211016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 6084150 - 6084246
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||  | ||||| | |||||||||| | ||||||||  ||||||||||||| |  ||   ||||||||||||||||||||    
T  6084150 tagagattaatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 27072594 - 27072526
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||| ||||| |||||||| ||| ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  27072594 tagaaattaaagagttggacagaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 27072526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 29577459 - 29577523
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  29577459 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29577523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 30202205 - 30202141
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  30202205 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30202141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 39797212 - 39797272
Alignment:
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| ||||||||||| |||||| |||||| || |||| ||||||||| ||||||||||    
T  39797212 atagaacattatggcgtcatttgattcatgtaatcaattccacttagtggaataaggcttg 39797272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 40568485 - 40568421
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||| ||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  40568485 tatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttg 40568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 49347468 - 49347404
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  49347468 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 49347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 51602263 - 51602327
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| || |||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  51602263 tatgatagaacatcatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 51602327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 2545192 - 2545145
Alignment:
Q  193 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 240  Q
    ||||| || ||||||||||||||||||| ||||||| |||||||||||    
T  2545192 ttggagagggatatgatatatgatagaacattatggtgtcgtttgatc 2545145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 12135864 - 12135943
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatga-tatatgatagaaaattatggcgtcgtttgat 239  Q
    |||||||||||||| | ||||||||||| ||||||||||||  ||| | | |||||||||  ||||||| ||||||||||    
T  12135864 aaactattaagaaaaatctagagattaatgagttggatagaattataattttatgatagagcattatggggtcgtttgat 12135943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 12231524 - 12231571
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgata 210  Q
    |||||||||||| | || |||||||| |||||||||||||||||||||    
T  12231524 actattaagaaagatctcgagattaatgagttggatagagatatgata 12231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 22319931 - 22319856
Alignment:
Q  194 tggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataa 269  Q
    ||||||||||||||||||| ||||||| || |||| ||||||| || |||| || | || | ||||||||||||||    
T  22319931 tggatagagatatgatatacgatagaatatcatggtgtcgtttaatacatgcagccgatcccacttagtgggataa 22319856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 40416528 - 40416595
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatgg 228  Q
    |||||||||||||| | ||| ||||||| ||||||||| || ||||| | |||||||||| |||||||    
T  40416528 aaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatgg 40416595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 48861485 - 48861391
Alignment:
Q  178 ctagagattaacgagttggatagagatatg--atatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 270  Q
    ||||||||||| |||||||||||| |||||  |||| |||||||  |||||| ||||||||||| ||||| | | |  | |||||||||||||||    
T  48861485 ctagagattaatgagttggatagaaatatggtatatttgatagagcattatgacgtcgtttgattcatgtcgccgaccccacttagtgggataag 48861391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 9599519 - 9599433
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||| ||||||  ||||| |||| ||||| |||  ||||||| | ||||||||||  |||||||||  ||||||||||||||    
T  9599519 aaactattaggaaatatttagagtttaatgagtttgatccagatatggtttatgatagaacgttatggcgtaatttgatccatgtag 9599433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 28528512 - 28528598
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||  | ||||||||||| |||||||| | ||| ||| | | |||||||  | |||||||||||||||| |||||||    
T  28528512 aaactattaagaaggatctagagattaatgagttggagaaagacatggtttttgatagaccactatggcgtcgtttgattcatgtag 28528598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 39515993 - 39515907
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| ||||||| ||||| |||||||||  | |||||   |||| ||||| |||||||| | |||||||| ||||||    
T  39515993 aaactattaagaaaaacctagaaattaatgagttggatcaaaatatggattatggtagaacattatggcattgtttgatctatgtag 39515907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 2544641 - 2544749
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||| ||| | |||||||||||| | |||||||||| |||||||||  || ||||||||| | |||||| | ||||||  ||| |||||  ||    
T  2544641 aggtggtttggacatgtagagagaagacctatagattctatagtaaggagagtagatcagatggaggatagtcaaa-cactagaggtagaggaagaccta 2544739  T
Q  158 gaaaaactat 167  Q
    ||||||||||    
T  2544740 gaaaaactat 2544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 15086108 - 15086193
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||||| | |||||||| | |||| |||| |||||||||||||| | |  | ||||||||||||||||||||    
T  15086108 gagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 15086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 52814350 - 52814305
Alignment:
Q  230 gtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||||||||| |||| | |||||||||| |||||||||    
T  52814350 gtcgtttgatccatgtagcctatcccacttagtgggttaaggcttg 52814305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 19908142 - 19908046
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||  | ||||| | |||||| ||| ||||| ||||  ||| |||||||||| | |  | ||||||||||||||||||||    
T  19908142 tagagattaatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttg 19908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 28090769 - 28090705
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| ||||    
T  28090769 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttg 28090705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 34792424 - 34792360
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||    
T  34792424 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 34792360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 37462947 - 37462887
Alignment:
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  37462947 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 37462887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 38807770 - 38807682
Alignment:
Q  187 aacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||||  | ||||| | |||||||||| | ||||||||  |||| ||||||||| | |  | ||||||||||||||||||||    
T  38807770 aacgagttggatccaaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttg 38807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 42337763 - 42337827
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  42337763 tatgatagaacactatggcatcatttgatccatgtagccaaccccacttagtgggataaggcttg 42337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 44941851 - 44941787
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  44941851 tatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 44941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 52921287 - 52921351
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||| ||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  52921287 tatgatagaacactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 52921351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 37228239 - 37228321
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||||||| || |||| |||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  37228239 aaactattaagaaagacttagaaattaacgagttggataaagatatgataaatggtagaacattatggcgtcgtttgatccat 37228321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 46431804 - 46431690
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||| ||| | ||||||||||| ||||||||||||||||| ||||||||| ||| |||  ||||||||||||||||||| | | |  | |||||    
T  46431804 aaactattaaaaaagatctagagattaatgagttggatagagatattatatatgatggaacattgaggcgtcgtttgatccatgtcgccaaccccactta 46431705  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  46431704 gtgggataaggcttg 46431690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 247
Target Start/End: Original strand, 36304002 - 36304209
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    ||||||||||||| |||| || ||  |||||||| | |||||||||||||| ||| || ||| ||||||| |  || |||| |||||| |||| ||  ||    
T  36304002 gatggtggaaact-aggttagatgggttgggcatgtagagagaagacctgtagatgctttagtaaggagaatagatcagatagagggtagtcagattact 36304100  T
Q  139 agagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttga 238  Q
    |||| ||| || |||  ||| ||||||||||||||| | ||||||||||| |||||||||  | ||||| | |||||||| | ||||||||||  |||||    
T  36304101 agaggcagttgtagacctagtaaaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttga 36304200  T
Q  239 tccatgtag 247  Q
    |||||||||    
T  36304201 tccatgtag 36304209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 37598295 - 37598207
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    |||||||||||| ||| ||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||| |||||  |||||||||    
T  37598295 aaactattaagatatatctagagattaatgagttggataggggtatgatatatgatagaacattatggcgtcatttgactcatgtagtc 37598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 21427707 - 21427595
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| ||||||||||  | ||||||||||||||| |||| ||||| |    ||| |||||||||||||||||||||||| || |||||||    
T  21427707 aaactattaagaaagacctagagat--atgagttggatagagatttgatttatgacaaggcattgtggcgtcgtttgatccatgtagtcaatcctactta 21427610  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||| ||||    
T  21427609 gtgggataagacttg 21427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 43308719 - 43308805
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | |||||||||||  |||||||||||||||||||||||||||||| || || ||| || |||||||||||||    
T  43308719 aaactattaagaaaaatctagagattaatcagttggatagagatatgatatatgatagaacataattgcgccggttgatccatgtag 43308805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 55244441 - 55244518
Alignment:
Q  167 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 244  Q
    |||||||| | ||||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||    
T  55244441 ttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgatccatg 55244518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 37228085 - 37228167
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||||||| || |||| ||||| ||||| |||| |||||||||| ||| ||||| ||||||||||||||||||||||    
T  37228085 aaactattaagaaagacttagaaattaatgagttagataaagatatgataaatggtagaacattatggcgtcgtttgatccat 37228167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 46367495 - 46367426
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||| || ||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||    
T  46367495 ctagagatgaatgagttggataaggatatgatatatgatagaacattatgacgtcgtttgatccatgtag 46367426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 2340842 - 2340759
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 244  Q
    |||||||||||||| | ||||||||||| |||| ||| || |  |||||||||||||||| |||||||||| ||||||||||||    
T  2340842 aaactattaagaaagatctagagattaatgagtcggagagggtaatgatatatgatagaacattatggcgttgtttgatccatg 2340759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 246
Target Start/End: Complemental strand, 39535570 - 39535440
Alignment:
Q  117 gatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagatt-aacgagttggatagagatatgatatatga 215  Q
    ||||||| || |||||||| |||||| |||| | ||| |||| ||||||||||||||  | |||| | |  || ||||||||||  ||||||||||||||    
T  39535570 gatggagagtagtcaaatcactagaggcagaagtagacttagtaaaactattaagaaggatctagtgttgcaatgagttggataaggatatgatatatga 39535471  T
Q  216 tagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||| ||||||| | |||||||||||||||    
T  39535470 tagaacattatggtggcgtttgatccatgta 39535440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 41971376 - 41971283
Alignment:
Q  180 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    ||||||||| |||||| | ||| |||||||||||||||||| |||||| ||| ||||||||||||||| | | || ||||||| |||||||||||    
T  41971376 agagattaatgagttgtacagaaatatgatatatgatagaacattatgacgttgtttgatccatgtagccaactccacttagt-ggataaggctt 41971283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 659703 - 659796
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| ||||||||||| ||||| ||||||||||||| ||||||||   ||||||||||||||| | |  | |||||||||| |||||||||    
T  659703 agattaatgagttggatagggatattatatatgatagaacattatggcagtgtttgatccatgtagccgaccccacttagtggggtaaggcttg 659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 23534695 - 23534607
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||||| |||| || |||||||||| ||||||||  |  ||||||| |||||||||| ||||||||||  ||||||||||||||||    
T  23534695 aaactattaggaaagacttagagattaatgagttggactgtaatatgatttatgatagaacattatggcgtaatttgatccatgtagtc 23534607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 29337698 - 29337587
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggata--gagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattc 254  Q
    ||||||||||| |||||| || | |||||||| ||||||||||  ||||||||||||||||  ||| |||||  ||||||||| ||||||||| | || |    
T  29337698 agaaaaactataaagaaagacttcgagattaatgagttggatatagagatatgatatatgacggaatattatatcgtcgtttggtccatgtagccgatcc 29337599  T
Q  255 tacttagtggga 266  Q
    |||||| |||||    
T  29337598 tacttaatggga 29337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 29475843 - 29475953
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||  | |||||||||||| ||||||||  ||||| |||| ||| | | || | |||    
T  29475843 aaactattaagaaagatctagagattaatgagttggattgaaatattgtttatgatagaaaactatggcgtaatttgacccatctagccaactccagtta 29475942  T
Q  261 gtgggataagg 271  Q
    |||||||||||    
T  29475943 gtgggataagg 29475953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 49841773 - 49841859
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| ||| | ||| ||||||| ||||||||| || ||||| |||||||||||| |||||||| |  ||||||||||||||    
T  49841773 aaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtag 49841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 27893246 - 27893359
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||| ||  ||||||||||||| |||||||| | ||| ||||| | ||| |||| | |||||| | ||||||| ||||||| | || | |||||    
T  27893246 aaactattaaaaaggacctagagattaatgagttggagaaagacatgatttttgaaagaacactatggcattgtttgattcatgtagccgatcccactta 27893345  T
Q  261 gtgggataaggctt 274  Q
    ||||||||||||||    
T  27893346 gtgggataaggctt 27893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 41425463 - 41425378
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||| ||| |  |||| ||||| ||||||||||| ||| || |||||||||||| ||||||  |||||||||||||||||    
T  41425463 aaactattaaaaaacatttagatattaatgagttggatagggatgtgctatatgatagaatattatgatgtcgtttgatccatgta 41425378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 11284163 - 11284231
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||||||||| | ||||| |||||||| ||| ||||| || |||||||||||||||||    
T  11284163 tagagattaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtag 11284231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 32052501 - 32052433
Alignment:
Q  180 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagt 248  Q
    ||||| ||| |||||| ||||||||||||| |||||||||| ||||| ||||| |||| ||||||||||    
T  32052501 agagactaatgagttgaatagagatatgatgtatgatagaacattattgcgtcatttggtccatgtagt 32052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 5852397 - 5852346
Alignment:
Q  193 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 244  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||||||||    
T  5852397 ttggatagaaatatgatatatgatagagtattatgacgtcgtttgatccatg 5852346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 19758039 - 19758157
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 255  Q
    |||||||||||||| ||||||  |||||||||| |||||||||    ||||| | |||||||||| |||||||  |  |||||||||||||| | |  |     
T  19758039 tagaaaaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaacattatggtataatttgatccatgtag-cgacccc 19758137  T
Q  256 acttagtgggataaggcttg 275  Q
    ||||||||||||||||||||    
T  19758138 acttagtgggataaggcttg 19758157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 7942864 - 7942924
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    ||||||| ||||||| || ||| ||||||||||||| || | |||||||||||||||||||    
T  7942864 gatagaacattatggtgttgttcgatccatgtagtcgataccacttagtgggataaggctt 7942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 12096780 - 12096716
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  12096780 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 21200698 - 21200787
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 245  Q
    |||||| |||||||| ||||| | ||||| ||||| |||||||||||| |||||   ||| |||||  |||||||||||||||||| |||||    
T  21200698 attagacaaactatttagaaagatctagatattaatgagttggatagaaatatg--gtattatagagcattatggcgtcgtttgatgcatgt 21200787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 47555407 - 47555343
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  47555407 tatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttg 47555343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 47789003 - 47789135
Alignment:
Q  118 atggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttgg--atagagatatg----atat 211  Q
    ||||||||| || |||||   ||||||||| ||||| |||||||||||||||||||| | ||| | |||||  ||||||  |||||||||||    ||||    
T  47789003 atggagggtagtgaaatcaaaagagacagaggaagacttagaaaaactattaagaaaaatctatatattaataagttggatatagagatatgttatatat 47789102  T
Q  212 atgatagaaaattatggcgtcgtttgatccatg 244  Q
    |||||||||  ||||| ||| ||||| ||||||    
T  47789103 atgatagaacgttatgacgttgtttggtccatg 47789135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 47804788 - 47804720
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 229  Q
    |||| ||||||||| |  |||||||||| |||||| ||||||| ||| |||||||||||| ||||||||    
T  47804788 aaacgattaagaaagatttagagattaatgagttgaatagagacatgctatatgatagaacattatggc 47804720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 6988075 - 6988172
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatg--atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    ||||||||||| |||||||||||| ||||| ||||||  |||||  ||||||||||| ||||||| |||||| | | ||   |||||||||||||||||    
T  6988075 ctagagattaatgagttggataga-atatggtatatgatatagatcattatggcgtcatttgatcaatgtagccgactccttttagtgggataaggctt 6988172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 21862843 - 21862752
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| || ||||||||| |||||||||  ||||||| | ||||| ||| |||||||||||||| | |  | |||||||| |||||||||||    
T  21862843 attaatgaattggatagaaatatgatattggatagaagaatatggtgtcatttgatccatgtagccgaccccacttagtgagataaggcttg 21862752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 33307188 - 33307247
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatc 135  Q
    |||||||||| ||| |||||||||| ||| ||||| ||| ||||||||||| ||||||||    
T  33307188 gagagaagacatgtagattctataggaagaagagtaaatcagatggagggtagtcaaatc 33307247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 50237760 - 50237673
Alignment:
Q  160 aaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||||||| |   ||||||||  |||||||||||| ||||  |||||||||||| ||||  ||  ||||||||||||||||    
T  50237760 aaaactattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaacattactgctccgtttgatccatgtag 50237673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 5169041 - 5169103
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  5169041 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 5169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 8476137 - 8476067
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgt 231  Q
    ||||| |||||||| | ||| |||||||  | ||||||||||||||| |||||||||||  ||||||||||    
T  8476137 aaacttttaagaaagatctaaagattaataatttggatagagatatggtatatgatagagtattatggcgt 8476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 34719205 - 34719127
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 239  Q
    ||||||||| || | | ||||| ||||| || |||||| |||||| |||||||||||||  |||||||| |||||||||    
T  34719205 aaactattaggacaaatctagaaattaatgatttggattgagatacgatatatgatagagcattatggcttcgtttgat 34719127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 45289216 - 45289102
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||| |||| |  |||||||||| |||||||||  | ||||| | |||||||||| ||||| || |  |||||||||||| | | |  | |||||    
T  45289216 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaaccccactta 45289117  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  45289116 gtgggataaggcttg 45289102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 7278653 - 7278734
Alignment:
Q  193 ttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    |||||| | |||||||||||| |||||| |||||  |||| |||||||||||||| | |  | |||||||||||||| ||||    
T  7278653 ttggatcgggatatgatatattatagaacattataacgtcatttgatccatgtagccgaccccacttagtgggataaagctt 7278734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 41452865 - 41452816
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgata 210  Q
    |||||||||||||| | ||||||||||| |||||||||| | ||||||||    
T  41452865 aaactattaagaaagatctagagattaatgagttggataaatatatgata 41452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 48508421 - 48508506
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  48508421 gagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 48508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 49503632 - 49503579
Alignment:
Q  222 attatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||  |||||||||||||| | |  ||||||||||||||||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttg 49503579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 311404 - 311320
Alignment:
Q  191 agttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||  ||||||| | | |||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||    
T  311404 agttggatccagatatggtttttgatagaacactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttg 311320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 388369 - 388273
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||  |||||| ||| | |||||||||||  |||||| |||  ||||||| |||||| | |  | ||||||||||||||||||||    
T  388369 tagagattaatgagtaagatagaaatacggtatatgatagagcattatgacgtaatttgatcaatgtagccaaccccacttagtgggataaggcttg 388273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 2133687 - 2133623
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||  ||||||||||||| || |  | ||||||||||||||||||||    
T  2133687 tatgatagaacactatggcgtgatttgatccatgtactcgaccccacttagtgggataaggcttg 2133623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 7895955 - 7895891
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||| ||||||||||||||    
T  7895955 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttg 7895891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 41842652 - 41842560
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||||||| |||| | | |||||| |||| ||||| ||| || ||||| | | |||||||| ||||||| ||  ||||||||||||||||    
T  41842652 agaaaaactataaagatagatctagaggttaatgagttagattgaaatatggtttttgatagaacattatggtgtaatttgatccatgtagtc 41842560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 42026639 - 42026591
Alignment:
Q  183 gattaacgagttggatagagatatgatatatgatagaaaattatggcgt 231  Q
    |||||| ||||| |||||| ||||| |||||||||||| ||||||||||    
T  42026639 gattaatgagttagatagaaatatggtatatgatagaacattatggcgt 42026591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 54128586 - 54128650
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||| |  |||||||||||||| | |  | ||||||||||||||||||||    
T  54128586 tatgatagaacattatggcataatttgatccatgtaggcgaccccacttagtgggataaggcttg 54128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 275
Target Start/End: Complemental strand, 25574 - 25454
Alignment:
Q  156 tagaaaaactattaagaaat-acctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattc 254  Q
    ||||||||||||||| |||| |  |||||||||| |||||||||||| ||| | ||||||||| || |||||||| |||||||||| |||||||| || |    
T  25574 tagaaaaactattaaaaaatgatttagagattaatgagttggatagaaataagttatatgataaaacattatggcttcgtttgatctatgtagtcaatcc 25475  T
Q  255 tacttagtgggataaggcttg 275  Q
     |||| |||||||||||||||    
T  25474 cactttgtgggataaggcttg 25454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 3645243 - 3645352
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||| |||||||| ||||||||||||| |||| |||| |||||||||||| |||||||| ||||||| |||  ||||||||||||| | || |||||||    
T  3645243 aaactgttaagaaagacctagagattaatgagtaggatggagatatgatatgtgatagaatattatggtgtccattgatccatgtagccgatcctactta 3645342  T
Q  261 gtgggataag 270  Q
     || ||||||    
T  3645343 atgagataag 3645352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 12611671 - 12611768
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| || ||||||| |||| |||||||||||| |||||  |||||| |||||||||||||||||| | || | | ||||||||||||||||||    
T  12611671 ctagagataaatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagccgatcccaattagtgggataaggcttg 12611768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 23023382 - 23023467
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||| ||||||| | ||| ||||||| |||||||||||  | |||||||||||||||| |||||| ||||||||||||||||||    
T  23023382 aaactactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatattatgacgtcgtttgatccatgta 23023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 26055595 - 26055692
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| ||| ||||||| | ||||||||||||| ||| ||||||  | |||||||||||||||| | || | ||||||||||||||||||||    
T  26055595 ctagagattaatgagatggataggggtatgatatatgattgaacattatgatggcgtttgatccatgtagccgatcccacttagtgggataaggcttg 26055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 38689769 - 38689869
Alignment:
Q  117 gatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgat 216  Q
    ||||||| || |||||||| |||||| || | ||  | |||||||||||||||||||  ||||||||||||| |||||| |||| |||||||||||||||    
T  38689769 gatggagagtagtcaaatcactagaggcataggactatttagaaaaactattaagaatgacctagagattaatgagttgcatagggatatgatatatgat 38689868  T
Q  217 a 217  Q
    |    
T  38689869 a 38689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 39760558 - 39760447
Alignment:
Q  162 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttag 261  Q
    |||||||||||||   |||||||||||  |||||||||||||||||||||||||| ||| ||| ||||| || ||||||||||||| | ||  || | ||    
T  39760558 aactattaagaaaactctagagattaataagttggatagagatatgatatatgattgaatattgtggcgccg-ttgatccatgtagccaatcttattaag 39760460  T
Q  262 tgggataaggctt 274  Q
    |||||||||||||    
T  39760459 tgggataaggctt 39760447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 10108970 - 10109037
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatgg 228  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  10108970 aaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatgg 10109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 25117446 - 25117528
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||| ||||| |||||||||| |  |||||||||||| |||||||||||||||| |||||| | | |||||||||||||||    
T  25117446 tattaacaaatatctagagattaccaggttggatagagaaatgatatatgatagaacattatgacattgtttgatccatgtag 25117528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 39967624 - 39967538
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | |||| |||||| ||||||||| |||||||  | |||| ||||| |||||||||| |||||||||||||||    
T  39967624 aaactattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgtag 39967538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 79184 - 79269
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||||||| | ||||||||||| ||| |||||||| |||||   | |||||||| || ||||||||||||||||||||||    
T  79184 aaactattaagaaagatctagagattaatgagctggatagaaatatggcctgtgatagaacataatggcgtcgtttgatccatgta 79269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 23492184 - 23492305
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctatt 253  Q
    |||||| |||||| | ||||| |  ||| |||||| |||||||||||| |||||||||||||||||| | ||||| ||| ||| |||||||||| | |      
T  23492184 attagagaaactactcagaaagatgtagcgattaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgacc 23492283  T
Q  254 ctacttagtgggataaggcttg 275  Q
    | |||||||| |||||||||||    
T  23492284 ccacttagtgagataaggcttg 23492305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 37826461 - 37826529
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||||| ||||||||||||| ||||| |||||||||||  |||||||| || |||||||||||||    
T  37826461 ctagagattagcgagttggatagaaatatggtatatgatagagtattatggcatcatttgatccatgta 37826529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 10080036 - 10079973
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 220  Q
    ||||||||| |||||||| | ||||||||||| |||||||||||| ||||||||| ||||||||    
T  10080036 agaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaa 10079973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 16715449 - 16715544
Alignment:
Q  180 agagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||| | ||| ||||| ||||||||||||||||||| |||||||||  |||||||||| |||| | |  || ||||||||||| |||||||    
T  16715449 agagattaatgggtttgatagggatatgatatatgatagaacattatggcggtgtttgatccacgtagccgaccctgcttagtgggattaggcttg 16715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 39388940 - 39389057
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatga---tatatgatagaaaattatggcgtcgtttgatccatgtagtctattctac 257  Q
    ||||||||| |||| | ||||||||||| |||||||||||| ||| ||   ||| || ||||| |||||||||||||||||||||||| | | |  | ||    
T  39388940 aaactattaggaaagatctagagattaatgagttggatagaaataagaaactatttggtagaagattatggcgtcgtttgatccatgtggccaaccccac 39389039  T
Q  258 ttagtgggataaggcttg 275  Q
    |||||||||||| |||||    
T  39389040 ttagtgggataaagcttg 39389057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 11733904 - 11733986
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccat 243  Q
    ||||||| |||||| | ||||||||||| ||||| |||||| ||||| ||| |||||||  ||||||||||||||||| ||||    
T  11733904 aaactataaagaaaaatctagagattaatgagttagatagaaatatggtatgtgatagagcattatggcgtcgtttgaaccat 11733986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 38178385 - 38178331
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatga 215  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||    
T  38178385 aaactattaacaaagacctagacattaatgagttggatagagatatgatatatga 38178331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 275
Target Start/End: Complemental strand, 12692364 - 12692251
Alignment:
Q  162 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttag 261  Q
    ||||||||||||| |||||||||||| || ||| |||||| | |||  ||||  ||||| |||||| |||||||| ||||| | || | |||| | ||||    
T  12692364 aactattaagaaagacctagagattaccgggttagatagaaaaatggcatatagtagaacattatgccgtcgtttaatccacgcagccgattccaattag 12692265  T
Q  262 tgggataaggcttg 275  Q
    ||||||||||||||    
T  12692264 tgggataaggcttg 12692251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 490510 - 490606
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | |||||||||  | ||||| | |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  490510 tagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 490606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 27037792 - 27037875
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatg 244  Q
    ||||||||| |||| |  || ||||||| |||||||||||| ||||| ||| |||||||| ||||||||||  |||||||||||    
T  27037792 aaactattaggaaagatataaagattaatgagttggatagaaatatggtatttgatagaatattatggcgttttttgatccatg 27037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 30748641 - 30748706
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||| |||||||||||| ||||||||||| || ||| ||||||  ||| ||||||||||||||    
T  30748641 agattaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtag 30748706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 11523798 - 11523734
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  11523798 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11523734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 21425221 - 21425289
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| ||||||||| || ||||||| |||||||||  |||||||| |  ||||||||||||||    
T  21425221 tagagattaatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccatgtag 21425289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 29520824 - 29520892
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||||||||  | ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  29520824 tagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 29520892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 38392018 - 38391934
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 245  Q
    |||| ||||||||| | ||| ||||||| |||| |||| || ||||| |||||||||||| ||||||||||  ||| ||||||||    
T  38392018 aaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatggcgtaatttcatccatgt 38391934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 41972037 - 41971849
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    ||||||||||| | || | ||||| ||||| ||| | |||||||||| ||| |||| | ||| |||||||||  || || |||| | | |||||||| ||    
T  41972037 gatggtggaaaataagtttaggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatcaggtggacgatagtcaaatcact 41971938  T
Q  139 agagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 227  Q
    |||| || | ||| |  ||||||||||| ||||||| |  |||||||||| ||||||||  || ||||  | |||||||||| ||||||    
T  41971937 agaggcaaaggaaaacctagaaaaactactaagaaagatttagagattaatgagttggactgaaatattgtttatgatagaacattatg 41971849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 43904772 - 43904704
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||||||||  | ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  43904772 tagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 43904704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 5908706 - 5908797
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 167  Q
    |||||||||||||| |||| | ||| |||||||||  || || |||||| |||||| ||| ||||||||| | |||||  ||||||||||||    
T  5908706 gagagaagacctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagagacataggaagacctagaaaaactat 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 6483447 - 6483566
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattct 255  Q
    ||||||||||||||||||| |  || || |||| || |||||| |||||  ||| |  ||||||| ||||| |||| |||||||||||||||   |  ||    
T  6483447 tagaaaaactattaagaaagatttaaaggttaatgaattggattgagatgagatgttcgatagaatattatcgcgttgtttgatccatgtagctgaccct 6483546  T
Q  256 acttagtgggataaggcttg 275  Q
    ||||||||||| ||||||||    
T  6483547 acttagtgggaaaaggcttg 6483566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 12491213 - 12491150
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||||||||    
T  12491213 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 12491150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 16705904 - 16705975
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatat-gatagaaaattatggcgt 231  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||| ||||| ||| ||| ||||||||||    
T  16705904 aaactattaagaaaaagctagagattaatgagttggatcgaaatatggtatatggatggaacattatggcgt 16705975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 33666693 - 33666650
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatat 206  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||    
T  33666693 actattaagaaagacctagagattaatgagtttgatagagatat 33666650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 35914823 - 35914732
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 167  Q
    |||||||||||| | |||| ||||| |||||||||   | ||||||||| | |||| ||| ||||||||||| |||||  ||||||||||||    
T  35914823 gagagaagacctatagattttatagcaaggagagtaggtcagatggaggatagtcagatccctagagacagaggaagacatagaaaaactat 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 44175275 - 44175346
Alignment:
Q  167 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttga 238  Q
    |||||||| | ||||||||| | ||||||| |||||||||||||||||||| || || || || ||||||||    
T  44175275 ttaagaaagatctagagattgatgagttgggtagagatatgatatatgataaaacatcatcgcttcgtttga 44175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 14742155 - 14742093
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  14742155 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 14742093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 17491779 - 17491693
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| || | |||||||| ||||||||   | ||||| | |||||||||| ||||||||||   |||||||||||||    
T  17491779 aaactattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtatgttgatccatgtag 17491693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 30198371 - 30198277
Alignment:
Q  181 gagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| ||||||||| |  ||||| | |||||||||| ||||||| || |||||||| |||| | | |  | ||||||||||||||||||||    
T  30198371 gagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgttgccgaccccacttagtgggataaggcttg 30198277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 1928659 - 1928598
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  1928659 gatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 1928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 16917358 - 16917399
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaa 220  Q
    |||||||||| |||||||||||| ||||| ||||||||||||    
T  16917358 tagagattaatgagttggatagaaatatggtatatgatagaa 16917399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 275
Target Start/End: Original strand, 43733416 - 43733477
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| | ||||||||||||| || ||||||| | || | ||||||||||||||||||||    
T  43733416 gatagaacactatggcgtcgtttcattcatgtagccgatcccacttagtgggataaggcttg 43733477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 1549499 - 1549431
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||||||| |||||||||||  | |||||||||| ||||| ||||   | ||||||||||||||||    
T  1549499 ctagagattaatgagttggatagcaacatgatatatggtagaacattactacatcgtttgatccatgta 1549431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 3464246 - 3464182
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||  | ||||||||||| ||||| |||| ||||| ||||||||| ||||    
T  3464246 tatgatagaacattatggtatagtttgatccatatagtcgattccacttaatgggataagacttg 3464182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 4011240 - 4011324
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 245  Q
    |||||||||||||| | ||| ||||||| |||||||||| |||| ||  ||| ||||||| |||||| | | |||||||| ||||    
T  4011240 aaactattaagaaagatctaaagattaatgagttggataaagatgtggaatacgatagaacattatgacattgtttgatcaatgt 4011324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 25473478 - 25473414
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||| ||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  25473478 tatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 25473414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 29700318 - 29700426
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||||||| | |||| ||||||  | |||||| ||| |||||||||  |||||||||||| | |||| ||| ||||||  ||| |||||  ||    
T  29700318 aggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatggaggatagtcatatcactagaggtagaggaagaccta 29700417  T
Q  158 gaaaaacta 166  Q
    |||||||||    
T  29700418 gaaaaacta 29700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 36545356 - 36545420
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||| |||| |||||||||||||| | |  | ||||||||||||||||||||    
T  36545356 tatgatagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 36545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 44529432 - 44529496
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  44529432 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 44529496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 45419442 - 45419506
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||| ||  |||||||||||||| | |  | ||||||||||||||||||||    
T  45419442 tatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 45419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 41483644 - 41483753
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | ||||| |||||||||||||||| |||||||||||||| |||||  |||||| ||| | |||||||||||| | |  | |||||    
T  41483644 aaactattaagaaagatctagaaattaacgagttggatatagatatgatatatggtagaactttatggtgtcatatgatccatgtagccgaccccactta 41483743  T
Q  261 gtgggataag 270  Q
    ||||||||||    
T  41483744 gtgggataag 41483753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 247
Target Start/End: Complemental strand, 40008676 - 40008470
Alignment:
Q  39 gatggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctct 138  Q
    |||||||||||||  | | ||||| ||||||||| | |||| || |||| |||||| | | |||||||||||  |||||||||||| | || |||||  |    
T  40008676 gatggtggaaactcggattaggtggtttgggcatgtagagataa-acctattgattttgttgaaaggagagtagattagatggaggatagttaaatcatt 40008578  T
Q  139 agagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttga 238  Q
    ||||  ||| ||||| ||| ||| ||||  |||| | |  || ||||||| |||||||||||||| |||||||||||||||| |||||| ||| ||||||    
T  40008577 agaggtagaggaagacttaaaaacactac-aagagaaatttatagattaatgagttggatagagacatgatatatgatagaacattatgtcgttgtttga 40008479  T
Q  239 tccatgtag 247  Q
    |||||||||    
T  40008478 tccatgtag 40008470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 12966173 - 12966287
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||| ||||||||| |  |||||| | | ||||||| ||||||| | || | |||||    
T  12966173 aaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatgccattgtttgattcatgtagccgatcccactta 12966272  T
Q  261 gtgggataaggcttg 275  Q
    |||||||||||||||    
T  12966273 gtgggataaggcttg 12966287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 40139073 - 40138987
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | ||||||||||| | ||| |||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  40139073 aaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttgatccatgtag 40138987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 19262583 - 19262498
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||||| ||||  | ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||  ||||||| ||||||    
T  19262583 aaactatttagaagcatctagagattaatgagttggatagggatatgatatatgatagaacattatggcggtgtttgattcatgta 19262498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 30914610 - 30914513
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  |||||||  |||||||||||| | | | |  | ||||||||||||||||||||    
T  30914610 ctagagattaatgagttggatagggatatgatatatgatagaactttatggcagcgtttgatccatattgccaaccccacttagtgggataaggcttg 30914513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 36245376 - 36245267
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgg 264  Q
    |||||||||| |  || |||||||| |||| |||||| ||||| |||||||||||| |||||| |||||||||||||| |||||| || | || |||| |    
T  36245376 tattaagaaagatgtacagattaactagttagataga-atatggtatatgatagaacattatgacgtcgtttgatccacgtagtcgatcccacatagttg 36245278  T
Q  265 gataaggcttg 275  Q
    |||||||||||    
T  36245277 gataaggcttg 36245267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 28628058 - 28627945
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||| |||| |  |||||||||| |||||||||  | || || | |||||||||| ||||||||||  |||||||||||||| | | || |||||    
T  28628058 aaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactccactta 28627959  T
Q  261 gtgggataaggctt 274  Q
    ||||||||||||||    
T  28627958 gtgggataaggctt 28627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 275
Target Start/End: Complemental strand, 27893746 - 27893574
Alignment:
Q  103 aggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagag 202  Q
    ||||||||  || ||||||||| |  ||| ||| ||||||| ||| ||||   ||||||||||||||||||| |  |||||||||| ||| ||||  ||     
T  27893746 aggagagtagatcagatggaggatattcagatcactagagatagaggaagtcctagaaaaactattaagaaagatttagagattaatgagctggaccgaa 27893647  T
Q  203 atatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| | |||||||||| |||||||| |  |||||| ||||||| | |  |||||||||| |||||||||||    
T  27893646 atatgttttatgatagaacattatggcataatttgattcatgtagccgaccctacttagtgcgataaggcttg 27893574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 275
Target Start/End: Complemental strand, 36101935 - 36101788
Alignment:
Q  128 gtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatg 227  Q
    |||| ||| |||||| |||| |||||  |||||||| ||||| |||| |  || ||||||| |||||||||  | ||||| | |||||||||| ||||||    
T  36101935 gtcagatcactagaggcagaggaagacctagaaaaattattatgaaagatttatagattaatgagttggatcaaaatatggtttatgatagaacattatg 36101836  T
Q  228 gcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
     |||  |||||||||||||||  |  | ||||||||||||||||||||    
T  36101835 acgtaatttgatccatgtagttgaccccacttagtgggataaggcttg 36101788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 22174157 - 22174243
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||| || ||| | ||||||||||| || || |||||| ||||| ||| |||||||| |||||||||| |||||||||||||||    
T  22174157 aaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaacattatggcgttgtttgatccatgtag 22174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 22349825 - 22349891
Alignment:
Q  209 tatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||| | ||||||||| |||||||||||||||| |  | ||||||||||||||||||||    
T  22349825 tatatgatagaatactatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttg 22349891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 24549813 - 24549728
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | ||||||||||| ||||||||| || ||||| ||| ||||||||  |||| ||||||||| ||||||||||    
T  24549813 aaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaatcttattgcgtcgttt-atccatgtag 24549728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 36239921 - 36239835
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||| |||| |  ||||||||||||||||||||  | ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  36239921 aaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgtag 36239835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 475974 - 476046
Alignment:
Q  202 gatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| |||| ||||| |||||||||  |||||||||| |||||  |||||||||||||||||||||||||    
T  475974 gatatgatttatg-tagaacattatggcgctgtttgatccaagtagtggattctacttagtgggataaggcttg 476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 6807390 - 6807447
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||| |||||| ||||| | |||||||||| ||||||||||||||||||||||||||    
T  6807390 gagttagatagaaatatggtgtatgatagaacattatggcgtcgtttgatccatgtag 6807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 41578250 - 41578189
Alignment:
Q  159 aaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 220  Q
    ||||||| |||||||| |  |||||||||  |||||||||||||||||||||||||||||||    
T  41578250 aaaaactgttaagaaacatatagagattagtgagttggatagagatatgatatatgatagaa 41578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 7220931 - 7220999
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| | |||||||| |||||| |||| ||||||||||||||| | || ||||||||||||||    
T  7220931 tagagattaatgtgttggataaagatataatatgtgatagaaaattatgacatcatttgatccatgtag 7220999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 1569174 - 1569261
Alignment:
Q  162 aactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||||||||| | ||||||||||| |||||||||  | ||||| | |||||||||| |||| |||||  ||||||| ||||||||    
T  1569174 aactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaacattacggcgtaatttgatcgatgtagtc 1569261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 28542074 - 28541983
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||||||||||| |  |||||||||| ||||||||| ||  |||| | |||||||||| || ||||| | ||||||||| |||||    
T  28542074 tagaaaaactattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaacatcatggcatagtttgatccgtgtag 28541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 31840450 - 31840501
Alignment:
Q  224 tatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||||||| ||||||| |||  ||||||||||||||||||||||    
T  31840450 tatggcgtcgtttgattcatgtagcctaccctacttagtgggataaggcttg 31840501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 45601633 - 45601747
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag-tctattctactt 259  Q
    |||| ||||||||| | ||||||||||| |||||||||  | ||||||| |||||||||| | ||||| ||  |||||||||||||| |  | || ||||    
T  45601633 aaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctgaactc-actt 45601731  T
Q  260 agtgggataaggcttg 275  Q
    ||||||||||||||||    
T  45601732 agtgggataaggcttg 45601747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 9797828 - 9797758
Alignment:
Q  164 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgt 234  Q
    |||||||||||  | |||||||||| |||||||||||||||||||| ||||||| || ||| ||| |||||    
T  9797828 ctattaagaaaaccatagagattaatgagttggatagagatatgatgtatgatataacattgtggtgtcgt 9797758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 38607201 - 38607263
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | |||||||||||||||||||||||| | | || |||||||||| |||||||||    
T  38607201 tgatagaacactatggcgtcgtttgatccatgtagccgactccacttagtgggttaaggcttg 38607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 40830359 - 40830444
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||  | ||||| ||||| |||||| |||  ||||||||||||||||||| |||| || | ||||||||||||||||    
T  40830359 aaactattaagaaggatctagaaattaatgagttgtatat-gatatgatatatgatagaacattacggaggcgtttgatccatgtag 40830444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 30144835 - 30144904
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagaca 145  Q
    |||||||||| ||| |||||||||| | | |||||  || |||||||||||||||||||| |||||||||    
T  30144835 gagagaagacttgtagattctatagtacgaagagtagatcagatggagggtggtcaaatcactagagaca 30144904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 6375075 - 6375139
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  6375075 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 6375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 11594167 - 11594231
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  11594167 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 11594231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 12841350 - 12841286
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  12841350 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 12841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 21078124 - 21078188
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||||||| |||||||||||||| | | |  | ||||||||||||||||||    
T  21078124 tatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttg 21078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 28208403 - 28208339
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  28208403 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28208339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 29653671 - 29653619
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatat 213  Q
    |||||||||||||| | ||||||||||| ||||| |||||| |||||||||||    
T  29653671 aaactattaagaaagatctagagattaatgagttagatagaaatatgatatat 29653619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 31682677 - 31682613
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  31682677 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 31682613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 34869627 - 34869691
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  ||| ||||||||||||||||||    
T  34869627 tatgatagaacactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttg 34869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 35906276 - 35906212
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  35906276 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 35906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 39906447 - 39906383
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  39906447 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 39906383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 25579317 - 25579178
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| |||||| || | |||||||||| ||| |||||| | | ||| |||||  |||||||||||| | |||||||| | ||||  | |||||||  ||    
T  25579317 aggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaaatcacaagagttaaatgaagaccta 25579218  T
Q  158 gaaaaactattaagaaatacct-agagattaacgagttgg 196  Q
    |||||||||||| ||| ||| | ||||||||| |||||||    
T  25579217 gaaaaactattaggaactacttaagagattaatgagttgg 25579178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 28858202 - 28858261
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 220  Q
    |||||||||||||| | |||||||||||  ||||||||||| ||||  ||||||||||||    
T  28858202 aaactattaagaaagatctagagattaataagttggatagaaatattttatatgatagaa 28858261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 45836578 - 45836495
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggct 273  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||    
T  45836578 gagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 45836495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 15311113 - 15311151
Alignment:
Q  197 atagagatatgatatatgatagaaaattatggcgtcgtt 235  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  15311113 atagagatatgatatatgatacaaaattatggtgtcgtt 15311151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 25826603 - 25826553
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatga 215  Q
    |||||||||||| ||||| |||||  |||||||||| ||||||||||||||    
T  25826603 tattaagaaatagctagatattaataagttggatagtgatatgatatatga 25826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 30144932 - 30144978
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatg 207  Q
    |||||||||||||| | ||||||||||| ||||||||||| ||||||    
T  30144932 aaactattaagaaagatctagagattaatgagttggatagggatatg 30144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 36652199 - 36652261
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggct 273  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||    
T  36652199 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggct 36652261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 42177140 - 42177058
Alignment:
Q  164 ctattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||||||||| | |||||||| || |||||  ||| | ||||| |||||||| ||| |||||| |||||||||||| |||||    
T  42177140 ctattaagaaagatctagagataaatgagtttcataaaaatatggtatatgattgaacattatgacgtcgtttgatctatgta 42177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 5335962 - 5336039
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatc 135  Q
    ||||| ||||||||| | ||||||||| |||| |||||| |||  ||||||||  |||||||||||||  ||||||||    
T  5335962 aggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattagatggaggggagtcaaatc 5336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 40980024 - 40979939
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  40980024 gagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 40979939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 47848716 - 47848825
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||||||| | |||||||||| |||  ||||| ||  |||||||||  || ||||||||| | |||  ||| |||||| |||| |||||| ||    
T  47848716 aggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgatcactagaggcagaggaagaacta 47848815  T
Q  158 gaaaaactat 167  Q
    ||||||||||    
T  47848816 gaaaaactat 47848825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 4604754 - 4604818
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||||||  |||||||||||||| | |  | ||||||||||||||| ||||    
T  4604754 tatgatagaacattatggcgtactttgatccatgtagccaaccccacttagtgggataagacttg 4604818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 5336077 - 5336161
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||  | ||||||||||| |||||||| | ||| ||| | | |||| ||| | |||||||||||||||| |||||||    
T  5336077 actattaagaatgatctagagattaatgagttggagaaagacatggtttttgattgaatactatggcgtcgtttgattcatgtag 5336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 24777168 - 24777232
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||| |||| |||||| ||||||| | || |||||||||||||||| |||||    
T  24777168 tatgatagaacactatgacgtcatttgattcatgtagccgatcctacttagtgggataaagcttg 24777232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 28021146 - 28021206
Alignment:
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| ||||||  ||||||||| |||||||| ||| || |||| |||||||||||||||    
T  28021146 atagaacattatgaggtcgtttgacccatgtagcctactccacttggtgggataaggcttg 28021206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 28858068 - 28858196
Alignment:
Q  40 atggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaatt-agatggagggtggtcaaatctct 138  Q
    ||||| |||||| | || ||||| ||||||||| | || ||| ||||||| |||||||||| ||| |||||  ||| ||||||||  | |||||||| ||    
T  28858068 atggtagaaactcaagttaggtggtttgggcatgtagaaagatgacctgtggattctatagtaagaagagtagattcagatggagcattgtcaaatcact 28858167  T
Q  139 agagacagatgaagaattagaaaaactat 167  Q
    | ||||| |  |||| |||||||||||||    
T  28858168 atagacaaagtaagacttagaaaaactat 28858196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 34035261 - 34035165
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||| || |||||||||  | ||||| |  ||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||| |||||||    
T  34035261 tagagatcaatgagttggatccaaatatggttcatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttg 34035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 37618152 - 37618216
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||| ||| |||||||||||||| | |  | ||||||||||||||||||||    
T  37618152 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 37618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 40149088 - 40149024
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||   ||||||| |||||| | | || ||||||||||||||||||||    
T  40149088 tatgatagaacattatggcgcaatttgatctatgtagccgaatccacttagtgggataaggcttg 40149024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 28005687 - 28005783
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa----aattatggcgtcgtttgatccatgtagt 248  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||||||| |||||||     ||||||| |||||||||||||||||||    
T  28005687 tagaaaaactattaagaaagatctagagattaatgagtttgatagggatatgatatacgatagaacattcattatggtgtcgtttgatccatgtagt 28005783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 15588486 - 15588401
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | | ||| ||||||| |||| ||||||||||||||||||| |||||| | |  ||||||||||||||||||||||    
T  15588486 gagttggataaaaacatggtatatgacagaacattatggcgtcgtttgatctatgtagccgaccctacttagtgggataaggcttg 15588401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 27998598 - 27998683
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    |||||| ||||||| | ||| ||||||| ||||| |||||  | |||||||||||||||| |||||| ||||||||||||||||||    
T  27998598 aaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatccatgta 27998683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 30639395 - 30639310
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| ||||||||||| ||||| | || ||| |||| ||||||||||||||||||| |  ||||||||||||||||| ||||    
T  30639395 gagttggacagagatatgatttatgacaaaacattgtggcatcgtttgatccatgtagtcaaccctacttagtgggataagacttg 30639310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 18351009 - 18350941
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||||||||||| ||||| ||| || ||||| |||||| |||||||||||||||||||    
T  18351009 tagagattaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtag 18350941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 28186900 - 28186793
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| |  |||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||||| || | |  ||||| |    
T  28186900 aaactattaagaaagatttagagattaatgagttggatagagatatgata-------gaacattatggcgtcgtttgatccatgcagccgaccctactca 28186808  T
Q  261 gtgggataaggcttg 275  Q
     ||||||||||||||    
T  28186807 atgggataaggcttg 28186793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 41808100 - 41808167
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    ||||||| |||||||||| | ||||||| |||||||||| |||||| | |||||||||||||||||||    
T  41808100 agattaatgagttggatataaatatgatgtatgatagaacattatgacatcgtttgatccatgtagtc 41808167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 12576985 - 12576899
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||||| | ||||||||||| |||||| ||||| ||||| |||||||||||  ||||||| ||| ||| || |||||||    
T  12576985 aaactattaagaaagatctagagattaatgagttgaatagaaatatggtatatgatagaccattatggtgtcattttatacatgtag 12576899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 43475396 - 43475510
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| | | ||||||||| ||||||||| || ||||||| |||| |||||  |||||| ||  ||||||||| |||| | | || |||||    
T  43475396 aaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatggtagaacgttatggtgtaatttgatccacgtagccaactccactta 43475495  T
Q  261 gtgggataaggcttg 275  Q
     ||||||||||||||    
T  43475496 atgggataaggcttg 43475510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 9235204 - 9235316
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    |||||||||||||| |  |||||||||| ||| ||||| || ||||| | |||||||||| |||||||| |  |||||||||||||| | |  | |||||    
T  9235204 aaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaacattatggcataatttgatccatgtagccga-cccactta 9235302  T
Q  261 gtgggataaggctt 274  Q
    ||||||||||||||    
T  9235303 gtgggataaggctt 9235316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 20456975 - 20457044
Alignment:
Q  206 tgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||| |||||||||| ||||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  20456975 tgatgtatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 36123290 - 36123193
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| |||||   ||| | ||||||||||||||||| ||||||| | ||||||||||||||| ||  | | ||||||||||||||| ||||    
T  36123290 ctagagattaatgagttatgtaggggtatgatatatgatagaacattatggtggcgtttgatccatgtaatcggtcccacttagtgggataagacttg 36123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 38684637 - 38684724
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagt 248  Q
    ||||| |||||||| | |||||||||||  ||||||||||| ||||| ||  |||||||| ||||||||||  |||||| ||||||||    
T  38684637 aaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatggcgttatttgattcatgtagt 38684724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 14749464 - 14749542
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 239  Q
    ||||||| |||||  | |||||||||||||||||||||||| ||||| | | |||||||| | ||||||||| ||||||    
T  14749464 aaactatcaagaaggatctagagattaacgagttggatagaaatatggtttttgatagaacactatggcgtcatttgat 14749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 2645176 - 2645261
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||| || || ||| ||||| || ||||| || ||||||||||||||||| |    ||||||||||||||||||||||    
T  2645176 gagttggatagaaatgtggtatttgataaaacattatagcatcgtttgatccatgtagccggccctacttagtgggataaggcttg 2645261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 2712986 - 2713095
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||||||| | |||||||||||||| |||||| ||  |||||||||  || |||||||||   |||||||| |||||| |||  |||||  ||    
T  2712986 aggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcagatggaggagagtcaaatcactagagtcaggggaagaccta 2713085  T
Q  158 gaaaaactat 167  Q
    ||||||||||    
T  2713086 gaaaaactat 2713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 38685153 - 38685238
Alignment:
Q  190 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  | ||||| | |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  38685153 gagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 38685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 39128236 - 39128305
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||   |||||||||| ||| |||||||||||| || ||||||||| |||||||| |||||||    
T  39128236 ctagagattactcagttggatagggatttgatatatgatacaacattatggcgccgtttgatacatgtag 39128305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 2066154 - 2066238
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgt 245  Q
    |||||| ||| ||| | ||||||||||| |||||||||| |  |||  | || ||||||||||||||||||||| ||||||||||    
T  2066154 aaactactaaaaaagatctagagattaatgagttggataaaattatagtttacgatagaaaattatggcgtcgtgtgatccatgt 2066238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 2915571 - 2915507
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  2915571 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 2915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 4460366 - 4460414
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgatat 211  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| |||||    
T  4460366 actattaagaaagacctagagattaatgagttggatagaaatacgatat 4460414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 29816589 - 29816653
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  29816589 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 29816653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 30213782 - 30213846
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  30213782 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 30213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 41200428 - 41200360
Alignment:
Q  204 tatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggc 272  Q
    ||||| |||||||||||  ||||||| || |||||||||||||| |||  | |||||||||||||||||    
T  41200428 tatgacatatgatagaacgttatggcatcatttgatccatgtagcctaccccacttagtgggataaggc 41200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 5303619 - 5303713
Alignment:
Q  179 tagagattaacgagttggatagagatat--gatatatgatagaaaattatggcgtcg-tttgatccatgtagtctattctacttagtgggataag 270  Q
    ||||| |||| |||||||||||| ||||  | |||||||||||| |||||||||| | ||| |||||||||| | || | |||||||||||||||    
T  5303619 tagagtttaatgagttggatagaaatatatggtatatgatagaatattatggcgttgttttaatccatgtagccgatcccacttagtgggataag 5303713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 14749367 - 14749458
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactat 167  Q
    |||||||||||||| |||||| | | |||||||||  || ||||||||||  |||||||| ||| || |||| |||||  ||||||||||||    
T  14749367 gagagaagacctgtggattctgttgtaaggagagtcgatcagatggaggggagtcaaatcactaaaggcagaggaagacctagaaaaactat 14749458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 27249358 - 27249425
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaat 223  Q
    ||||||||||||||||| |   |||||||||||| || | |||||||||||| || ||||||||||||    
T  27249358 tagaaaaactattaagagaggtctagagattaacaaggtagatagagatatgttacatgatagaaaat 27249425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 31636160 - 31636049
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||||||| | ||||||||||| || |||  | ||| |||||||||  ||||||||| |||  |||||||| ||||||| ||  |||||  ||    
T  31636160 aggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattagatggtggggagtcaaatcactagagataggggaagatcta 31636061  T
Q  158 gaaaaactatta 169  Q
    ||||||||||||    
T  31636060 gaaaaactatta 31636049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 11002494 - 11002432
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | |||||| | ||||||| ||||||||| |  ||||||||||||||||||||||    
T  11002494 tgatagaacactatggcattgtttgattcatgtagtcgaccctacttagtgggataaggcttg 11002432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 13141710 - 13141824
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctactta 260  Q
    ||||||||||| || ||||||||||||| | ||   |||||||| |||||||||  |||| ||| ||   ||||| | ||||||||||  ||||||||||    
T  13141710 aaactattaaggaagacctagagattaatgtgtactatagagatgtgatatatgccagaacattgtgaattcgttcgttccatgtagttaattctactta 13141809  T
Q  261 gtgggataaggcttg 275  Q
     | ||||||||||||    
T  13141810 ataggataaggcttg 13141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 13561459 - 13561397
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  13561459 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 13561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 30588610 - 30588712
Alignment:
Q  167 ttaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtggga 266  Q
    |||||||| | |||||||| || ||||||||| || ||||| | ||| |||||| |||||| |||  | |||||||||||| | | || |||||||||||    
T  30588610 ttaagaaagatctagagatgaatgagttggatcgaaatatggtttataatagaacattatgacgtgatatgatccatgtagccgactccacttagtggga 30588709  T
Q  267 taa 269  Q
    |||    
T  30588710 taa 30588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 39322196 - 39322146
Alignment:
Q  156 tagaaaaactattaagaaatacctagagattaacgagttggatagagatat 206  Q
    ||||||||||||||||||| | ||| ||||||| |||||||||||| ||||    
T  39322196 tagaaaaactattaagaaagatctaaagattaatgagttggatagaaatat 39322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 3442979 - 3442882
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||| || ||||| | ||| ||| | | |||||||| | |||||||||||||||| ||||||| | |  | ||||||||| ||||||||||    
T  3442979 ctagagattaatgaattggagaaagacatggtttttgatagaacactatggcgtcgtttgattcatgtagccgaccccacttagtggcataaggcttg 3442882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 11675704 - 11675801
Alignment:
Q  179 tagagattaacgagttggatag-agatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| |||||||||   | ||||| | |||||||||| |||||||||| |||| |||||||||| | |  | ||||||| ||||||||||||    
T  11675704 tagagattaatgagttggattttaaatatggtttatgatagaacattatggcgtagtttaatccatgtagccgaccccacttagttggataaggcttg 11675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 15252848 - 15252755
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||||||||||||||| || ||| | | |||||||||| ||||||  || |||| || ||||||| | |  | ||||||||||||||||||||    
T  15252848 agattaacgagttggatcgaaatagggtttatgatagaacattatgatgtagtttaattcatgtagccgaccccacttagtgggataaggcttg 15252755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 21952399 - 21952508
Alignment:
Q  58 aggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaatta 157  Q
    ||||| ||||| ||| | |||||||| ||||| |||||||||| ||||||| |  || ||||||||||  |||||||| ||||||  ||  |||||  ||    
T  21952399 aggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggaggggagtcaaatcactagaggtaggggaagaccta 21952498  T
Q  158 gaaaaactat 167  Q
    ||||||||||    
T  21952499 gaaaaactat 21952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 38684540 - 38684589
Alignment:
Q  76 gagagaagacctgttgattctatagaaaggagagtgaattagatggaggg 125  Q
    ||||||||||||||  ||||||||| |||||||||  |||||||||||||    
T  38684540 gagagaagacctgtgtattctatagtaaggagagtatattagatggaggg 38684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 408565 - 408505
Alignment:
Q  215 atagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  408565 atagaatactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 418141 - 418073
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| |||||||||  | || || | |||||||||| ||||||||||  ||||||||||||||    
T  418141 tagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtag 418073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 2075548 - 2075484
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||    
T  2075548 tatgatagaatactatggcgtcatttgattcatgtagccaaccccacttagtgggataaggcttg 2075484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 4496591 - 4496655
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  4496591 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 4496655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 5860041 - 5860105
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||  ||||||||||  ||||||| |||||| | |  ||||||||||||||||||||||    
T  5860041 tatgatagaccattatggcgtaatttgatctatgtagccgaccctacttagtgggataaggcttg 5860105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 9917582 - 9917526
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgata 210  Q
    |||||| |||||||| ||||| |  ||||||| || |||||||||||||||||||||    
T  9917582 attagagaaactatttagaaagatatagagatcaatgagttggatagagatatgata 9917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 9917671 - 9917579
Alignment:
Q  77 agagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaactatta 169  Q
    ||||||||| |||||||| | ||| || ||||||  || ||||||||| | |||||||| | ||||||||| || ||  ||||||||||||||    
T  9917671 agagaagacatgttgattttgtagtaaagagagtcgatcagatggaggatagtcaaatcacaagagacagaggatgacctagaaaaactatta 9917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 10639509 - 10639573
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||| |||||||||||||||    
T  10639509 tatgatagaacactatggcgtcatttgatccatgtagccgaccccactttgtgggataaggcttg 10639573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 12492459 - 12492395
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||    
T  12492459 tatgatagaacactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttg 12492395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 14911347 - 14911415
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||| |||| |||||||||  | ||||||| | |||||||| | ||||||||| ||||||||||||||    
T  14911347 tagaggttaatgagttggatccaaatatgatttttgatagaatactatggcgtcatttgatccatgtag 14911415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 22576181 - 22576217
Alignment:
Q  176 acctagagattaacgagttggatagagatatgatata 212  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  22576181 acctaaagattaatgagttggatagagatatgatata 22576217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 28276445 - 28276509
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||||| ||||| ||  |||||||||||||| | | || |||||| |||||||||||||    
T  28276445 tatgatagaaaactatggtgtaatttgatccatgtagccaactccacttagcgggataaggcttg 28276509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 28976934 - 28976870
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||| ||||||| | |  | ||||||||||||||||||||    
T  28976934 tatgatagaacactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttg 28976870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 32442197 - 32442141
Alignment:
Q  214 gatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataag 270  Q
    ||||||| ||||||||||  |||||||||||||| | | || |||||||||||||||    
T  32442197 gatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataag 32442141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 38132543 - 38132607
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| ||||||||||  |||||||||||| | | |  | ||||||||||||||||||||    
T  38132543 tatgatagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttg 38132607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 42576217 - 42576281
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| || |||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  42576217 tatgatagaacataatggcgtaatttgatccatgtagccgacccgacttagtgggataaggcttg 42576281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 1748077 - 1747983
Alignment:
Q  154 attagaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagt 248  Q
    |||||| |||||| ||||||| |  |||||||||| |||||||||||| ||||  |||||||||||| |||| | ||||||||||||||||||||    
T  1748077 attagagaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtagt 1747983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 275
Target Start/End: Complemental strand, 6293644 - 6293403
Alignment:
Q  40 atggtggaaacttaggtaaggtgatttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctcta 139  Q
    ||||||||||||  | | ||||| ||||||||| | ||||||| |||||| |||| | ||  ||||||||| ||| ||||| ||| | |||||||| |||    
T  6293644 atggtggaaactaggttcaggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaaggatagtcaaatcacta 6293545  T
Q  140 gagacagat---gaagaattagaa---aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcg 233  Q
    |||  ||||   ||| || || ||   ||||||||| |||||| ||||| ||||| ||||| |||||| ||||| |||||||||||  ||||||||  ||    
T  6293544 gaggaagatctagaaaaactaaaatagaaactattaggaaatatctagatattaatgagttagatagaaatatggtatatgatagagcattatggcaacg 6293445  T
Q  234 tttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||| || |||||| | |  | ||||||||||||||||||||    
T  6293444 tttggtcaatgtagccgaccccacttagtgggataaggcttg 6293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 33997669 - 33997590
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 240  Q
    ||||||||||||||  |||||||||||| |||||||||||| ||||| || ||||| ||| ||||||||||| |||||||    
T  33997669 aaactattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaacattatggcgtcatttgatc 33997590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 34630 - 34544
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||| ||||||||| | ||| ||||||| ||||||||| || ||||| | |||||||||| ||||||||||  ||||||||||||||    
T  34630 aaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 34544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 32945428 - 32945491
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||| ||||| |||||| ||||  |||||||||||| ||||||| ||||||||||||||||||    
T  32945428 attaatgagttagatagaaatattttatatgatagaacattatggtgtcgtttgatccatgtag 32945491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 3963967 - 3964025
Alignment:
Q  182 agattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatc 240  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||| ||||| ||||||||    
T  3963967 agattaatgagtttgatagagatacgatatatgatagaacattacggcgttgtttgatc 3964025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 7150432 - 7150350
Alignment:
Q  165 tattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||| ||||| ||||||| |||||  ||| |||||| |||||||| | || |||||||||| | |||||||||||||    
T  7150432 tattaagaaagacctatagattaatgagttaaatatagatattatatatgacataacattatggcgttggttgatccatgtag 7150350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 26676435 - 26676373
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  26676435 attaatgagttggatagggatatgctatattatagaacattatggcggcatttgatccatgta 26676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 26677615 - 26677553
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgta 246  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||||||||| | |||||||||||||    
T  26677615 attaatgagttggatagggatatgctatattatagaacattatggcggcatttgatccatgta 26677553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 30789147 - 30789085
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | |||| |||| |||||||||||||| | || ||||||||||||||||||||||    
T  30789147 tgatagaacactatgacgtcatttgatccatgtagccgatcctacttagtgggataaggcttg 30789085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 3210616 - 3210547
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    ||||||||||| ||||||||| || ||||||  |||||||||| ||||||| ||  ||||||||||||||    
T  3210616 ctagagattaatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccatgtag 3210547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 34143840 - 34143776
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||||| |  | ||||| ||||||||||||||    
T  34143840 tatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 34156456 - 34156392
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||||| |  | ||||| ||||||||||||||    
T  34156456 tatgatagaacactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttg 34156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 35199747 - 35199680
Alignment:
Q  161 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggc 229  Q
    ||||||||| |||| | ||||||||||| ||||| |||||| ||||| |||||||||||| ||||||||    
T  35199747 aaactattaggaaagatctagagattaatgagttagatagaaatatg-tatatgatagaacattatggc 35199680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 1747842 - 1747775
Alignment:
Q  97 atagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaaac 164  Q
    |||| ||||||||||  ||||||||||||| ||||||| ||||||| |||| |||||  |||||||||    
T  1747842 atagtaaggagagtggcttagatggagggtagtcaaatttctagaggcagaggaagacctagaaaaac 1747775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 4245966 - 4245883
Alignment:
Q  192 gttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||| ||| |||||||| |||||| | |||||||||||| |||| | |  | ||||||||||||||||||||    
T  4245966 gttggataaaaatatggtatttgatagaacattatgacatcgtttgatccaagtagccgaccccacttagtgggataaggcttg 4245883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 32515449 - 32515390
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttg 237  Q
    ||||||||||| ||||||||||||||||||| |||| || ||| |||||| ||| |||||    
T  32515449 ctagagattaatgagttggatagagatatgaaatattattgaatattatgccgttgtttg 32515390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 5096015 - 5096101
Alignment:
Q  185 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataagg 271  Q
    |||| |||||||||  | ||||| | |||||||||| ||||||||||  ||||||| |||||| | || | ||||||||||||||||    
T  5096015 ttaatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatcccacttagtgggataagg 5096101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 7267514 - 7267424
Alignment:
Q  157 agaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||| ||||| | |||| |||   |||| |||||| | ||||||||||||||  || ||||||  ||||||||||||||||||    
T  7267514 agaaaaactatttagaaagatctagcgatagccgaggtggataaaaatatgatatatgatgcaacattatgatgtcgtttgatccatgtag 7267424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 9749401 - 9749315
Alignment:
Q  121 gagggtggtcaaatctctagagacagatgaagaattagaaaaactattaagaaatacctagagattaacgagttggatagagatatg 207  Q
    |||||| ||||||||  ||||| |||| |||||  ||||||||||||||||||| | ||||||  ||||| | ||||||| ||||||    
T  9749401 gagggtagtcaaatcattagaggcagaggaagatctagaaaaactattaagaaaaatctagagcataacgtgctggatagggatatg 9749315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 12237895 - 12237861
Alignment:
Q  209 tatatgatagaaaattatggcgtcgtttgatccat 243  Q
    |||||||||||||||||||| ||||||||||||||    
T  12237895 tatatgatagaaaattatggtgtcgtttgatccat 12237861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 1747749 - 1747712
Alignment:
Q  178 ctagagattaacgagttggatagagatatgatatatga 215  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  1747749 ctagagattaatgagttggataaagatatgatatatga 1747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 6906951 - 6906866
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgatatatgata-gaaaattatggcgtcgtttgatccatgtag 247  Q
    |||||||||||| | ||||| |||||||||||||||| | | ||| |||| |||| ||| ||||||  |||| |||||||||||||    
T  6906951 actattaagaaagatctagatattaacgagttggatataaaaatgttataagataggaacattatgatgtcgattgatccatgtag 6906866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 5897656 - 5897728
Alignment:
Q  203 atatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| |||||| ||||| |||||| |||  ||||||||||||||   || | ||||||||||||||||||||    
T  5897656 atatggtatatggtagaatattatgacgtaatttgatccatgtagcggatcccacttagtgggataaggcttg 5897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 9706945 - 9707041
Alignment:
Q  179 tagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    ||||| |||| |||||||||  | ||||| | | |||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  9706945 tagaggttaatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttg 9707041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 12890782 - 12890846
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||  |||||||||||||| | |  | ||||||||||||||||||||    
T  12890782 tatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 12890846  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 21870300 - 21870200
Alignment:
Q  63 atttgggcatctggagagaagacctgttgattctatagaaaggagagtgaattagatggagggtggtcaaatctctagagacagatgaagaattagaaaa 162  Q
    |||| ||||| | |||||||||||||| |||| | ||| |||||||||  || |||||||| || |||||||| ||| || |||| |||||  |||||||    
T  21870300 atttaggcatttagagagaagacctgtagattttgtagtaaggagagtagataagatggagagtagtcaaatcactaaaggcagaggaagacctagaaaa 21870201  T
Q  163 a 163  Q
    |    
T  21870200 a 21870200  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 28085583 - 28085647
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||| ||| |||||||||||||| | |  | ||||||||||||||||||||    
T  28085583 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28085647  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 31819038 - 31819102
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | |||||||||||||| |||||    
T  31819038 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttg 31819102  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 32756128 - 32756192
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | || | |||||||||| |||| ||||    
T  32756128 tatgatagaacactatggcgtcatttgatccatgtagccgatcccacttagtggggtaagacttg 32756192  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 34934905 - 34934841
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | |||||| || |||||||||||||| | |  | ||||||||||||||||||||    
T  34934905 tatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttg 34934841  T

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Target: scaffold0373 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 2424 - 2338
Alignment:
Q  163 actattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtc 249  Q
    |||||||||||| | ||||||||||| ||||| |||||| ||||| ||||| |||||| |||||||| | ||| |||||||||||||    
T  2424 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatggcattgttggatccatgtagtc 2338  T

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Target: scaffold0392 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 6864 - 6783
Alignment:
Q  194 tggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| ||||| ||||||||| || |||||||| |  |||||||||||||| | |  | ||||||||||||||||||||    
T  6864 tggatagaaatatggtatatgatataacattatggcataatttgatccatgtagccaaccccacttagtgggataaggcttg 6783  T

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Target: scaffold1318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 538 - 602
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  538 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 602  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 28964 - 28900
Alignment:
Q  211 tatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||||| | ||||||||| |||||||||||||| | |  | ||||||||||||||||||||    
T  28964 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttg 28900  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 16787 - 16849
Alignment:
Q  213 tgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttg 275  Q
    |||||||| | ||||||||| ||||||| |||||| | | || ||||||||||||||||||||    
T  16787 tgatagaacactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttg 16849  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 58311 - 58238
Alignment:
Q  201 agatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggctt 274  Q
    ||||||| | |||||||||| |||||| |||  |||||||||||||| | |  | |||||||||||||||||||    
T  58311 agatatggtttatgatagaacattatgtcgtaatttgatccatgtagccgacccaacttagtgggataaggctt 58238  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 2987 - 2943
Alignment:
Q  184 attaacgagttggatagagatatgatatatgatagaaaattatgg 228  Q
    ||||| ||||| |||||| |||||||||| |||||||||||||||    
T  2987 attaatgagtttgatagaaatatgatatacgatagaaaattatgg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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