View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0683_low_37 (Length: 295)
Name: NF0683_low_37
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0683_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 59 - 257
Target Start/End: Complemental strand, 55397208 - 55397010
Alignment:
| Q |
59 |
caacaatatccaattcctctcatcacactcttctccgtctctattccccctcccttcctcaaaattcagcaccgttccttttcccacaccaatcagaaga |
158 |
Q |
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| T |
55397208 |
caacaatgtccaattcctctcatcacactcttctccgtctctattccccctcccttcctcaaaattcagcaccgttccttttcccacaccaatcagaaga |
55397109 |
T |
|
| Q |
159 |
agaacctccttttctactctcagattccgtagtttcactcgcagactcagaaactcgtcgacgaatgatgttaaactgaacgaaacggagcagaagaag |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
55397108 |
agaacctccttttctactctcagattccgtagtttcactcgcagactcagaaactcgtcgacgaatgatgttcaactgaacgaaacggagcagaagaag |
55397010 |
T |
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