View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0683_low_53 (Length: 216)
Name: NF0683_low_53
Description: NF0683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0683_low_53 |
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Alignment Details
Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24278657 - 24278573
Alignment:
| Q |
1 |
tttcaaacatttgagttattgggtctcttgagttagtggtgcnnnnnnnntcaagggcttttaattacaaaatacatgaatatat |
85 |
Q |
| |
|
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| T |
24278657 |
tttcaaacatttgagttattgggtctcttgagttagtggtgcaaaaaaaatcaagggcttttaaatacaaaatacatgaatatat |
24278573 |
T |
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