View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0684_low_10 (Length: 512)
Name: NF0684_low_10
Description: NF0684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0684_low_10 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-147; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 14179053 - 14178722
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
14179053 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaacacca |
14178954 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178953 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
14178854 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14178853 |
ctctctc--acacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
14178756 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
14178755 |
atacccacccggtgtatttttcccacactctctg |
14178722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 14174299 - 14173968
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
14174299 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgataaaaaaaatgaacacca |
14174200 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174199 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
14174100 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14174099 |
ctctctc--acacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
14174002 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
14174001 |
atacccacccggtgtatttttcccacactctctg |
14173968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 104 - 434
Target Start/End: Original strand, 28611571 - 28611902
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
28611571 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaatgaacacca |
28611670 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611671 |
atatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
28611770 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28611771 |
ctct--ctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
28611868 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
28611869 |
atacccacccggtgtatttttcccacactctctg |
28611902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 104 - 434
Target Start/End: Original strand, 28606809 - 28607140
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||| |
|
|
| T |
28606809 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaacacca |
28606908 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606909 |
atatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
28607008 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28607009 |
ctct--ctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
28607106 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
28607107 |
atacccacccggtgtatttttcccacactctctg |
28607140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 44161946 - 44161617
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
44161946 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaacacca |
44161847 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
44161846 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctctcca |
44161749 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
44161748 |
ctctctt--acacacacaagagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
44161651 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
44161650 |
atacccacccggtgtatttttcccacactctctg |
44161617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 11104826 - 11104500
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaata |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| |
|
|
| T |
11104826 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacaccaata |
11104727 |
T |
|
| Q |
204 |
tttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactc |
303 |
Q |
| |
|
|||||| | ||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
11104726 |
tttaacatagaaaatcctctaatatcgagggtaa-accacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctccactc |
11104628 |
T |
|
| Q |
304 |
tctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgata |
403 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11104627 |
tcttacacaca---aagagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagagatgata |
11104531 |
T |
|
| Q |
404 |
cccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||||||||||||||| |||||||||| |
|
|
| T |
11104530 |
tccacccggtgtatttttcctacactctctg |
11104500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 104 - 403
Target Start/End: Original strand, 48826705 - 48827000
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnnt-gaacaccaat |
202 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
48826705 |
tgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacaccaat |
48826802 |
T |
|
| Q |
203 |
atttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccact |
302 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
48826803 |
atttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctcttcgct |
48826901 |
T |
|
| Q |
303 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
402 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
48826902 |
ctctt--acacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttatagagatgat |
48826999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 298
Target Start/End: Original strand, 48708086 - 48708256
Alignment:
| Q |
128 |
tgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaatatttaacgtggaaaaccctctaata |
227 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| || | ||| ||| || | || ||||||||||||| || ||||| || ||||| |
|
|
| T |
48708086 |
tgtaaattaaaattccaaaatataaaagaaattgaatcttacaacgcagtggtggcgataaaattaaataccaatatttaacatgaaaaactctataata |
48708185 |
T |
|
| Q |
228 |
ctgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
298 |
Q |
| |
|
|| || |||| |||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
48708186 |
ctaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctctc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 372
Target Start/End: Original strand, 24726288 - 24726442
Alignment:
| Q |
213 |
gaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctctcaca |
312 |
Q |
| |
|
||||||| ||||||| ||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| | |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctct----ta |
24726383 |
T |
|
| Q |
313 |
cacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattat |
372 |
Q |
| |
|
| ||| |||||||| |||| ||||| |||||||||| ||| |||||| |||| |||||| |
|
|
| T |
24726384 |
ccgacacgagatacactatattgttttccgtgagacc-actcctattcaaatgttattat |
24726442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 12931037 - 12930707
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacaccaa |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
12931037 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacaccaa |
12930938 |
T |
|
| Q |
202 |
tatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
301 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930937 |
tatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
12930838 |
T |
|
| Q |
302 |
tctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatga |
401 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12930837 |
tctctc--acacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagatga |
12930740 |
T |
|
| Q |
402 |
tacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
12930739 |
tacccacccggtgtatttttcccacactctctg |
12930707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 12935783 - 12935453
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacaccaa |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
12935783 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacaccaa |
12935684 |
T |
|
| Q |
202 |
tatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
301 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935683 |
tatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
12935584 |
T |
|
| Q |
302 |
tctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatga |
401 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12935583 |
tctctc--acacacacaagagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttatagagatga |
12935486 |
T |
|
| Q |
402 |
tacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
12935485 |
tacccacccggtgtatttttcccacactctctg |
12935453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 26504945 - 26505063
Alignment:
| Q |
194 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
293 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| ||| ||| ||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
26504945 |
aacatcaatatttaacgtg-aataccgtctaataacaaggcaaa-accacagtacaaactccaaaaaatattcaactataataaaaaatattacaatatt |
26505042 |
T |
|
| Q |
294 |
ctctccactctctctcacaca |
314 |
Q |
| |
|
|| || ||||||| ||||||| |
|
|
| T |
26505043 |
ctttcaactctctttcacaca |
26505063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
192 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
291 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||| | || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
292 |
ttctctccactct |
304 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
109 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
154 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 34907500 - 34907170
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacaccaa |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
34907500 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacaccaa |
34907401 |
T |
|
| Q |
202 |
tatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
301 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907400 |
tatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccac |
34907301 |
T |
|
| Q |
302 |
tctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatga |
401 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
34907300 |
tctctc--acacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagatga |
34907203 |
T |
|
| Q |
402 |
tacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
34907202 |
tacccacccggtgtatttttcccacactctctg |
34907170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 104 - 434
Target Start/End: Original strand, 37040429 - 37040760
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
37040429 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaacacca |
37040528 |
T |
|
| Q |
201 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37040529 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttctcca |
37040628 |
T |
|
| Q |
301 |
ctctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
400 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37040629 |
ctct--ctcacacacacaagagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagatg |
37040726 |
T |
|
| Q |
401 |
atacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |
|
|
| T |
37040727 |
atacccacccgatgtatttttcccacactctctg |
37040760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 104 - 423
Target Start/End: Complemental strand, 15290591 - 15290273
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcacagcggtagcnnnnnnnn---tgaacacc |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
15290591 |
tgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcgataaaaaaaatgaacacc |
15290492 |
T |
|
| Q |
200 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcc |
299 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | | ||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15290491 |
aatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaatattacaatattctctcc |
15290392 |
T |
|
| Q |
300 |
actctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
399 |
Q |
| |
|
||| |||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
15290391 |
act--ctcttacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacctagaagttatagagat |
15290297 |
T |
|
| Q |
400 |
gatacccacccggtgtatttttcc |
423 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
15290296 |
gatacccacccggtgtatttttcc |
15290273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 104 - 404
Target Start/End: Complemental strand, 12099358 - 12099060
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaata |
203 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | ||||| |
|
|
| T |
12099358 |
tgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagcaata |
12099259 |
T |
|
| Q |
204 |
tttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactc |
303 |
Q |
| |
|
||| ||||| ||||||||||||| || ||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12099258 |
ttttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctccact- |
12099160 |
T |
|
| Q |
304 |
tctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgata |
403 |
Q |
| |
|
|||| |||| ||||||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
12099159 |
-ctcttacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagagatgata |
12099061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 249 - 424
Target Start/End: Complemental strand, 12082227 - 12082055
Alignment:
| Q |
249 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctctcacacacacaagagatacaatatagtgtttcccgtgagac |
348 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||| |||||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctctt--acacggaaaagagatacaatatagtgtttctaatgagac |
12082131 |
T |
|
| Q |
349 |
ctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttccc |
424 |
Q |
| |
|
|| |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| |
|
|
| T |
12082130 |
tcgctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc |
12082055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 2757370 - 2757448
Alignment:
| Q |
258 |
aaaatattccactatattaaagaatattacaatattctctccactctctctcacacacacaagagatacaatatagtgttt |
338 |
Q |
| |
|
|||||||||||||||||| || |||||| || ||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
2757370 |
aaaatattccactatatttaaaaatattgcactattctctccactctcttt--cacactcaagagatacaatatagtgttt |
2757448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 12084748 - 12084669
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
183 |
Q |
| |
|
||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| ||| || ||||||| |
|
|
| T |
12084748 |
tgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 2757236 - 2757273
Alignment:
| Q |
124 |
caagtgtaaattaaaattccaaaatccaaaagagattg |
161 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757236 |
caagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 104 - 434
Target Start/End: Original strand, 29106881 - 29107209
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaata |
203 |
Q |
| |
|
|||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
29106881 |
tgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacaccaata |
29106980 |
T |
|
| Q |
204 |
tttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactc |
303 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
29106981 |
tttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca--c |
29107078 |
T |
|
| Q |
304 |
tctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgata |
403 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
29107079 |
tctcttacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaagatgata |
29107177 |
T |
|
| Q |
404 |
-cccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||| |||||||||||||||||||||| |
|
|
| T |
29107178 |
ccccacccaatgtatttttcccacactctctg |
29107209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 104 - 434
Target Start/End: Original strand, 42910996 - 42911323
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaata |
203 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| | | |||||||||||| |
|
|
| T |
42910996 |
tgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacaccaata |
42911095 |
T |
|
| Q |
204 |
tttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactc |
303 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
42911096 |
tttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctccactc |
42911194 |
T |
|
| Q |
304 |
tctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgata |
403 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
42911195 |
t--ctcacacacacaaaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagagatgata |
42911292 |
T |
|
| Q |
404 |
cccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
||||||| |||||||||| |||||||||||| |
|
|
| T |
42911293 |
cccacccagtgtattttttccacactctctg |
42911323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 193 - 283
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
193 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
283 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || |||| || |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 38994702 - 38994779
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggta |
181 |
Q |
| |
|
|||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| |||||||| |
|
|
| T |
38994702 |
tgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 104 - 434
Target Start/End: Complemental strand, 8539545 - 8539214
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn-tgaacaccaat |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||| |||| |
|
|
| T |
8539545 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacatcaat |
8539446 |
T |
|
| Q |
203 |
atttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccact |
302 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
8539445 |
atttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctccact |
8539346 |
T |
|
| Q |
303 |
ctctctcacacacacaagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
399 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
8539345 |
--ctcttacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttatagagat |
8539249 |
T |
|
| Q |
400 |
gatacccacccggtgtatttttcccacactctctg |
434 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||| |
|
|
| T |
8539248 |
gatacccatccgatgtatttttcccacactctctg |
8539214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 51302306 - 51302192
Alignment:
| Q |
320 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
420 |
ttcccacactctctg |
434 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctg |
51302192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 51303016 - 51302937
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
183 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
51303016 |
tgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
192 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 104 - 283
Target Start/End: Original strand, 2100202 - 2100379
Alignment:
| Q |
104 |
tgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcacagcggtagcnnnnnnnntgaacaccaat |
202 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | |||||||||| || || |||||| |||| |
|
|
| T |
2100202 |
tgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatcaat |
2100301 |
T |
|
| Q |
203 |
atttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
283 |
Q |
| |
|
|||||| |||||||||||| ||||| |||| |||| || ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100302 |
atttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 2100723 - 2100771
Alignment:
| Q |
276 |
aaagaatattacaatattctctccactctctctcacacacacaagagatac |
326 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctcca--ctctcttacatacacaagagatac |
2100771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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