View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0684_low_47 (Length: 352)

Name: NF0684_low_47
Description: NF0684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0684_low_47
NF0684_low_47
[»] chr1 (45 HSPs)
chr1 (34-337)||(29961390-29961692)
chr1 (30-334)||(37952296-37952601)
chr1 (36-337)||(42882433-42882735)
chr1 (30-333)||(44496482-44496786)
chr1 (33-337)||(14587177-14587488)
chr1 (30-333)||(41723525-41723831)
chr1 (82-337)||(33801356-33801612)
chr1 (30-333)||(41091164-41091486)
chr1 (30-333)||(50261811-50262133)
chr1 (32-333)||(38860673-38860993)
chr1 (30-344)||(52632181-52632512)
chr1 (95-337)||(3517479-3517720)
chr1 (30-333)||(41086396-41086718)
chr1 (30-333)||(12528442-12528764)
chr1 (30-333)||(41900113-41900429)
chr1 (124-337)||(12700468-12700684)
chr1 (192-333)||(11952421-11952562)
chr1 (30-333)||(23983858-23984177)
chr1 (30-333)||(49851705-49852028)
chr1 (197-333)||(27216795-27216931)
chr1 (95-227)||(22858801-22858932)
chr1 (103-250)||(48964840-48964986)
chr1 (246-337)||(44757585-44757676)
chr1 (81-206)||(44757444-44757568)
chr1 (244-335)||(34549849-34549940)
chr1 (276-337)||(48964984-48965045)
chr1 (286-337)||(22858750-22858801)
chr1 (252-333)||(30518198-30518279)
chr1 (255-334)||(41366789-41366868)
chr1 (78-193)||(27216955-27217066)
chr1 (229-337)||(29913820-29913928)
chr1 (228-337)||(22817501-22817608)
chr1 (228-337)||(29250688-29250795)
chr1 (30-78)||(22858936-22858984)
chr1 (30-97)||(11952240-11952309)
chr1 (262-316)||(22334962-22335016)
chr1 (262-337)||(12524965-12525039)
chr1 (256-316)||(3475317-3475377)
chr1 (30-78)||(3517427-3517475)
chr1 (252-316)||(7564626-7564690)
chr1 (256-316)||(18272291-18272351)
chr1 (256-316)||(18276945-18277005)
chr1 (256-316)||(29946819-29946879)
chr1 (256-316)||(39598234-39598294)
chr1 (275-335)||(41933555-41933615)
[»] chr4 (41 HSPs)
chr4 (30-333)||(1602781-1603084)
chr4 (30-333)||(31093103-31093407)
chr4 (30-333)||(35158716-35159019)
chr4 (30-333)||(30003608-30003914)
chr4 (30-333)||(33281083-33281384)
chr4 (30-337)||(40728019-40728327)
chr4 (30-337)||(16023866-16024166)
chr4 (30-337)||(55136658-55136968)
chr4 (30-337)||(28780612-28780920)
chr4 (30-337)||(45229063-45229370)
chr4 (30-337)||(52416770-52417078)
chr4 (30-333)||(49374315-49374615)
chr4 (30-344)||(9035937-9036251)
chr4 (30-333)||(45462248-45462538)
chr4 (78-337)||(38218149-38218410)
chr4 (95-333)||(51538642-51538881)
chr4 (30-310)||(56463484-56463767)
chr4 (30-333)||(6963451-6963773)
chr4 (78-337)||(43841761-43842022)
chr4 (30-333)||(4189693-4190015)
chr4 (30-333)||(45924595-45924917)
chr4 (33-333)||(4048130-4048447)
chr4 (30-333)||(2013552-2013874)
chr4 (41-333)||(38551100-38551411)
chr4 (30-333)||(168359-168681)
chr4 (30-333)||(35319716-35320037)
chr4 (82-333)||(16451927-16452195)
chr4 (192-333)||(15542841-15542981)
chr4 (95-330)||(28310775-28311029)
chr4 (253-337)||(39807338-39807422)
chr4 (228-335)||(34953600-34953707)
chr4 (253-335)||(40602736-40602818)
chr4 (258-335)||(20516661-20516741)
chr4 (241-335)||(56084107-56084201)
chr4 (275-335)||(49604493-49604553)
chr4 (100-148)||(52499550-52499598)
chr4 (30-97)||(15542669-15542738)
chr4 (272-321)||(9183338-9183387)
chr4 (30-76)||(28310723-28310769)
chr4 (256-316)||(13721373-13721433)
chr4 (256-316)||(16684296-16684356)
[»] chr5 (33 HSPs)
chr5 (30-333)||(37012821-37013125)
chr5 (30-333)||(27114301-27114602)
chr5 (30-333)||(3556618-3556922)
chr5 (36-337)||(8734687-8734988)
chr5 (30-337)||(12785147-12785457)
chr5 (34-337)||(12723664-12723970)
chr5 (82-337)||(8197401-8197658)
chr5 (30-333)||(16513427-16513733)
chr5 (30-337)||(18808974-18809282)
chr5 (30-337)||(13821909-13822217)
chr5 (95-337)||(38679353-38679597)
chr5 (30-333)||(37883421-37883743)
chr5 (30-289)||(8299056-8299319)
chr5 (119-333)||(37030168-37030402)
chr5 (30-333)||(26279031-26279354)
chr5 (41-333)||(11719768-11720080)
chr5 (30-333)||(25976952-25977272)
chr5 (208-333)||(9715328-9715453)
chr5 (268-337)||(15858811-15858880)
chr5 (280-333)||(2606076-2606129)
chr5 (259-335)||(23252469-23252545)
chr5 (230-337)||(27495154-27495261)
chr5 (279-337)||(8300857-8300915)
chr5 (45-187)||(9715144-9715286)
chr5 (258-337)||(27690499-27690578)
chr5 (262-335)||(32695025-32695099)
chr5 (272-337)||(22911856-22911921)
chr5 (228-337)||(27948585-27948694)
chr5 (252-337)||(41616070-41616153)
chr5 (256-316)||(5343793-5343853)
chr5 (33-61)||(8197647-8197675)
chr5 (253-317)||(23344845-23344909)
chr5 (256-316)||(32746863-32746923)
[»] chr7 (24 HSPs)
chr7 (30-337)||(46254858-46255166)
chr7 (30-333)||(25528946-25529247)
chr7 (78-337)||(34847759-34848020)
chr7 (30-333)||(43458183-43458483)
chr7 (30-337)||(33950923-33951234)
chr7 (30-333)||(14816493-14816794)
chr7 (30-333)||(15263489-15263790)
chr7 (34-337)||(35794471-35794761)
chr7 (33-337)||(36311922-36312226)
chr7 (30-224)||(44866155-44866350)
chr7 (223-324)||(1377355-1377456)
chr7 (245-346)||(42321185-42321286)
chr7 (229-337)||(1852142-1852250)
chr7 (258-333)||(44863013-44863088)
chr7 (241-325)||(26188220-26188304)
chr7 (259-335)||(31326687-31326763)
chr7 (228-337)||(19646938-19647047)
chr7 (268-335)||(3601048-3601115)
chr7 (258-335)||(1906594-1906671)
chr7 (291-337)||(10907022-10907068)
chr7 (228-333)||(24687543-24687646)
chr7 (30-97)||(34847661-34847730)
chr7 (256-316)||(7255443-7255503)
chr7 (256-316)||(26792016-26792076)
[»] chr2 (30 HSPs)
chr2 (30-337)||(17308950-17309260)
chr2 (30-337)||(38703421-38703731)
chr2 (30-337)||(6404108-6404415)
chr2 (30-337)||(30490515-30490825)
chr2 (110-337)||(15911768-15911998)
chr2 (97-337)||(44760085-44760325)
chr2 (30-333)||(17137540-17137850)
chr2 (30-333)||(13278690-13279012)
chr2 (30-333)||(45117067-45117375)
chr2 (30-333)||(1209750-1210072)
chr2 (30-244)||(38208417-38208632)
chr2 (30-333)||(31993894-31994218)
chr2 (196-333)||(18137585-18137722)
chr2 (192-333)||(7942742-7942883)
chr2 (247-337)||(38207477-38207567)
chr2 (229-337)||(21485295-21485403)
chr2 (232-315)||(1114722-1114805)
chr2 (253-335)||(33945922-33946004)
chr2 (258-334)||(21649746-21649822)
chr2 (30-192)||(1115257-1115419)
chr2 (41-161)||(7942573-7942691)
chr2 (228-337)||(18963345-18963454)
chr2 (259-335)||(37127959-37128035)
chr2 (228-337)||(15257142-15257251)
chr2 (252-337)||(16739457-16739539)
chr2 (30-116)||(45234447-45234534)
chr2 (252-337)||(34906338-34906421)
chr2 (252-337)||(34948485-34948568)
chr2 (252-333)||(24168513-24168594)
chr2 (267-334)||(16252427-16252494)
[»] chr8 (33 HSPs)
chr8 (30-333)||(39318432-39318736)
chr8 (30-333)||(11076225-11076529)
chr8 (30-333)||(40105086-40105390)
chr8 (30-333)||(8239825-8240128)
chr8 (30-333)||(35683852-35684156)
chr8 (30-337)||(39260129-39260437)
chr8 (30-323)||(20091867-20092179)
chr8 (78-333)||(37098330-37098602)
chr8 (30-224)||(42131737-42131932)
chr8 (30-333)||(43098364-43098686)
chr8 (41-333)||(32337807-32338118)
chr8 (78-333)||(6347292-6347564)
chr8 (31-333)||(31700867-31701185)
chr8 (229-337)||(32947072-32947180)
chr8 (41-333)||(586241-586552)
chr8 (41-333)||(627371-627682)
chr8 (192-333)||(23144107-23144249)
chr8 (30-193)||(13546078-13546239)
chr8 (30-193)||(13678234-13678395)
chr8 (34-160)||(32947197-32947321)
chr8 (253-331)||(28284449-28284527)
chr8 (30-173)||(23143940-23144081)
chr8 (262-338)||(11457017-11457093)
chr8 (292-337)||(42131968-42132013)
chr8 (261-337)||(4258769-4258845)
chr8 (291-340)||(21269089-21269138)
chr8 (297-328)||(42131940-42131971)
chr8 (192-242)||(13546259-13546309)
chr8 (192-242)||(13678164-13678214)
chr8 (298-344)||(38225247-38225293)
chr8 (278-335)||(32124533-32124590)
chr8 (256-316)||(23421002-23421062)
chr8 (256-316)||(24830776-24830836)
[»] chr3 (35 HSPs)
chr3 (30-337)||(47646909-47647220)
chr3 (30-333)||(149323-149627)
chr3 (30-337)||(10509055-10509366)
chr3 (36-333)||(40937214-40937512)
chr3 (30-337)||(36402547-36402855)
chr3 (30-344)||(39586559-39586870)
chr3 (100-337)||(47013623-47013860)
chr3 (30-333)||(26502026-26502332)
chr3 (30-224)||(41182006-41182201)
chr3 (95-333)||(32529796-32530052)
chr3 (189-333)||(227626-227770)
chr3 (78-333)||(6936464-6936735)
chr3 (45-333)||(49165944-49166250)
chr3 (119-333)||(39353294-39353529)
chr3 (192-333)||(41193717-41193858)
chr3 (229-337)||(41174802-41174910)
chr3 (197-325)||(31765207-31765335)
chr3 (95-200)||(53814808-53814910)
chr3 (223-337)||(33843509-33843623)
chr3 (253-337)||(51328989-51329073)
chr3 (262-337)||(42899210-42899285)
chr3 (253-335)||(25214595-25214677)
chr3 (257-333)||(53393942-53394018)
chr3 (228-337)||(45405667-45405776)
chr3 (30-192)||(31765021-31765182)
chr3 (290-335)||(27023916-27023961)
chr3 (100-187)||(41193607-41193691)
chr3 (253-337)||(10494778-10494862)
chr3 (291-337)||(12717644-12717690)
chr3 (228-333)||(18876038-18876141)
chr3 (228-337)||(21979925-21980032)
chr3 (228-337)||(22002356-22002463)
chr3 (256-300)||(9119292-9119336)
chr3 (256-316)||(48062203-48062263)
chr3 (256-316)||(49327367-49327427)
[»] chr6 (13 HSPs)
chr6 (30-333)||(31271346-31271650)
chr6 (30-333)||(16395312-16395619)
chr6 (35-333)||(303751-304052)
chr6 (30-337)||(439024-439335)
chr6 (30-330)||(9304793-9305091)
chr6 (30-337)||(31722719-31723016)
chr6 (86-333)||(31318531-31318795)
chr6 (213-337)||(20818525-20818649)
chr6 (241-337)||(28546866-28546961)
chr6 (253-337)||(6837260-6837344)
chr6 (253-335)||(17519848-17519930)
chr6 (253-316)||(12305133-12305196)
chr6 (30-72)||(11975243-11975285)
[»] scaffold1301 (1 HSPs)
scaffold1301 (177-331)||(1654-1808)
[»] scaffold0054 (1 HSPs)
scaffold0054 (237-337)||(19067-19167)
[»] scaffold0210 (1 HSPs)
scaffold0210 (228-337)||(8146-8255)
[»] scaffold0048 (1 HSPs)
scaffold0048 (228-335)||(51836-51941)
[»] scaffold0160 (1 HSPs)
scaffold0160 (253-335)||(17301-17383)
[»] scaffold0001 (1 HSPs)
scaffold0001 (272-335)||(427263-427326)
[»] scaffold0121 (1 HSPs)
scaffold0121 (78-192)||(47321-47431)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 29961692 - 29961390
Alignment:
Q  34 ggccatgactgatgcattccggaatataaaattcggaatgcacatgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaa 133  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29961692 ggccatgactgatgcattccagaatataaaatccggaatgcacatctttttcggaatatattttt-cggattaatgcgataatggtggtgaacgagggaa 29961594  T
Q  134 aagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacac 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||| |||||    
T  29961593 aagttggcacttcatgtagggctaaggacattccggaatgtaaaattcggaaagattcagagccattaatgtgggtttgaacggttacaaccactaacac 29961494  T
Q  234 gttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  29961493 gttttcattgattgtattaatgacttaagacttattttaggctataaatagacttccatcttcaacaaataccttcattcttcacttcacatcttttctt 29961394  T
Q  334 acat 337  Q
    ||||    
T  29961393 acat 29961390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 30 - 334
Target Start/End: Complemental strand, 37952601 - 37952296
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||||||  |||||| ||| ||||| ||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  37952601 caccgaccatgactgatgcattccaaaatatataatccggaaagcacatctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 37952503  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||    
T  37952502 agggaaaagttgacacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaatgtgggtttggaccgttacaaccac 37952403  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37952402 taacacgttttcattgactgtattaatgacctaggacttgttttaggctataaaaaggcttccatcttcaacaaataccttcattcttcacttcacctct 37952303  T
Q  328 tttctta 334  Q
    |||||||    
T  37952302 tttctta 37952296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 36 - 337
Target Start/End: Original strand, 42882433 - 42882735
Alignment:
Q  36 ccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaa 133  Q
    |||||||||||||||||||||| ||||||| || |||| |||  ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  42882433 ccatgactgatgcattccggaaaataaaatccgaaatggacacctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacgagagaa 42882531  T
Q  134 aagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacac 233  Q
    ||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||| |||| || |||||||||||| |||||    
T  42882532 aagttggcacttcctgtagggctaagaacattccggaatgtaaacaccggaaagattcagagccattattgtgggtttggatggttacaaccactaacac 42882631  T
Q  234 gttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
     |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  42882632 attttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatatcttcattcttcacatcacctcttttctt 42882731  T
Q  334 acat 337  Q
    ||||    
T  42882732 acat 42882735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 44496786 - 44496482
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||| |||||||||||||| ||| |||||| |||||  |||||||||||||||||||  |||||||||||||||||| |||||||||    
T  44496786 caccggccatgactgatacattccggaatatacaatccggaattcacatatgttttccggaatatattttc-cggattaatgcgataatgatggtgaacg 44496688  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  44496687 agggaaaagttgacacttcctgtagagctaaagacattccggaatgtaaaatccggaaagattcaaagccattaatgtgggtttggacggttacaaccac 44496588  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| |    
T  44496587 taacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggctttcatcttcaacaaatactttcattcttcactccacctat 44496488  T
Q  328 tttctt 333  Q
    ||||||    
T  44496487 tttctt 44496482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 33 - 337
Target Start/End: Original strand, 14587177 - 14587488
Alignment:
Q  33 cggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagg 130  Q
    ||||||||||||||||||| ||||||||| ||| ||||| ||||||  |||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  14587177 cggccatgactgatgcattacggaatatataatccggaaagcacatctgttttctggaatatattttc-cggattaatgcgataatggtggtgaacgagg 14587275  T
Q  131 gaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaaccac 227  Q
    |||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||   ||||||||    
T  14587276 gaaaagttggtacttcctattgggctaaggacattccggaatgtaaaatccggaaagattcagagccatttatgtgggtttggacggttacaacaaccac 14587375  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaata---ggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
     |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  14587376 taacacgttttcattgactgtattaatgacttaggacttgttttaggctataaataggcggcttccatcttcaacaaataccttcattcttcacttcacc 14587475  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  14587476 tcttttcttacat 14587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 41723831 - 41723525
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  41723831 caccggccatgactgatgcattccggaatatataatccggaaagcacatctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 41723733  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggt---tacaac 224  Q
    |||||||||||| |||||  | ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||| |||| |    |||||    
T  41723732 agggaaaagttgacactttctatagggctaaggacattccgaaatgtaaaatctgaaaagattcagagccattaatgtgggtttggacgataacaacaac 41723633  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41723632 caccaacacgttttcattgactatattaatgaccta-gacttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcacttcacc 41723534  T
Q  325 tcttttctt 333  Q
    |||||||||    
T  41723533 tcttttctt 41723525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 82 - 337
Target Start/End: Complemental strand, 33801612 - 33801356
Alignment:
Q  82 ttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatcc 181  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||     
T  33801612 ttccggaatatattttc-cgaattaatgcgataatggtggtgaacgagggaaaa-ttggcacttcctatagggctaaggacattccggaatgtaaaatct 33801515  T
Q  182 ggaaagattcagagccattaatgtgagttttgacggttaca---accacgaacacgttttcattgattgtattaatgacctaggacttattttaggctat 278  Q
    |||||||||||||| |||||||||| |||| |||| |||||   ||||| |||||||||||||||| |||| ||||||| |||||||| |||||||||||    
T  33801514 ggaaagattcagagtcattaatgtgggtttggacgattacagcaaccactaacacgttttcattgactgtaataatgacttaggacttgttttaggctat 33801415  T
Q  279 aaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  33801414 aaataggcttccatcttcaaaaaatacctacattcttcacttcacctcttttcttacat 33801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 41091486 - 41091164
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||  | ||||||||||||||||||||   ||||    
T  41091486 caccagccataactgatgcatttcggaatataaaatccggaatgcacatctgttttccggaatatatttcct-ggattaatgcgataatggtg---aacg 41091391  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||| |||||                     |||||||||||||    
T  41091390 agggaaaagttgacacttcctgtatggctaaggacattccggaatgtaaaatccgaaaagcttcagcattggattcttttgaaagagagccattaatgtg 41091291  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41091290 ggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacc 41091191  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||| |||||||||    
T  41091190 ttcattcttcacttcacttcttttctt 41091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 50261811 - 50262133
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||| ||||||||||||||||||||||   |||||||||| |  ||| |||||||||||||  |||||||||||||||||||||   ||||    
T  50261811 caccggccatgaccgatgcattccggaatataaaatctagaatgcacatatgattttcggaatatattttc-cggattaatgcgataatggtg---aacg 50261906  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtg 206  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||                     ||| ||||||||||    
T  50261907 agggaaaagttggcacttcttgtagggctaaggacgttccggaatgtaaaatccggaatgcttcaacattggattcttttgaaagagagtcattaatgtg 50262006  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     ||||  |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50262007 ggtttgaacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacc 50262106  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  50262107 ttcattcttcacttcacctcttttctt 50262133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 32 - 333
Target Start/End: Complemental strand, 38860993 - 38860673
Alignment:
Q  32 ccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgag 129  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||  ||||||||||||||||| |||   ||||||    
T  38860993 ccggccatgactgatgcattccggaatataaaatccggaatgcacatctgttttccggagtatattttc-cggattaatgcgataatagtg---aacgag 38860898  T
Q  130 ggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtgag 208  Q
    ||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||                     |||||||||||||| |    
T  38860897 ggaaaagttggtacttcttgtagggctaaggacgttccagaatgtaaaatccggaaagcttcaacattggattcttttgaaagagagccattaatgtggg 38860798  T
Q  209 ttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacctt 308  Q
    ||| ||||||||| ||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  38860797 tttggacggttactaccactaacacgttttcattgaatgtattaatgatctatgacttgttttaggctataaataggctttcatcttcaacaaatacctt 38860698  T
Q  309 cattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||    
T  38860697 cattcttcacttcacctcttttctt 38860673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 30 - 344
Target Start/End: Original strand, 52632181 - 52632512
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||  |||||| | ||| |||| |||||||  |||||||||||||||||||  || ||||||||||||||||||   ||||    
T  52632181 caccggccatgactgatgcattatggaatagacaatccgga-tgcacatatgttttccggaatatattttc-cgaattaatgcgataatggtg---aacg 52632275  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag--------------------agccattaatgtga 207  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||                    |||||||||||||     
T  52632276 agagaaaagttggcacttcttgtagggctaaggacattccggaatgtaaaatccggtaagcttcagcactagattcttttgaaaaaagccattaatgtgg 52632375  T
Q  208 gttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacct 307  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  52632376 gtttagacggttacaaccactaacacgttttcattgattgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatgtct 52632475  T
Q  308 tcattcttcacttcacctcttttcttacatattattc 344  Q
    |||||||||||||||||||||||| | ||| ||||||    
T  52632476 tcattcttcacttcacctcttttcctccattttattc 52632512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 95 - 337
Target Start/End: Original strand, 3517479 - 3517720
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcaga 194  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||| | ||||||||||||||||||||||||||    
T  3517479 ttttccggattaatgcgataatggtggtgaacgagg-aaaagttggcacttcctatacggctaaggacatttcagaatgtaaaatccggaaagattcaga 3517577  T
Q  195 gccattaatgtgagttttgacggtt---acaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    |||||||||||| |||| |||||||   |||||||| |||||||||||||||| ||   ||||||||||||| || ||||||||||||||||| |||  |    
T  3517578 gccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactg---taatgacctaggagttgttttaggctataaatagactttta 3517674  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3517675 tcttcaacaaataccttcattcttcacttcacctcttttcttacat 3517720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 41086718 - 41086396
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||| ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||  | ||||||||||||||||||||   ||||    
T  41086718 caccagccataactgatgcatttcggaatataaaatccggaatgcacatctgttttccggaatatatttcct-ggattaatgcgataatggtg---aacg 41086623  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||| |||||                     |||||||||||||    
T  41086622 agggaaaagttgacacttcctgtatggctaaggacattccggaatgtaaaatccgaaaagcttcagcattggattcttttgaaagagagccattaatgtg 41086523  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  41086522 ggtttggaaggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagactataaataggcttccatcttcaacaaatacc 41086423  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||| |||||||||    
T  41086422 ttcattcttcacttcacttcttttctt 41086396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 12528764 - 12528442
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||  | ||| ||| ||||||| |||   ||||    
T  12528764 caccggccatgactgatgcattccggaatataaaatccggaatgcacatctgttttccggaatatattttc-cagatcaatacgataatagtg---aacg 12528669  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||| || |||||                     || ||||||| ||    
T  12528668 agggaaaagttggcacttcttgtagggctaaggacgttttggaatgtaaaatccggagagcttcagcattggtttcttttgaaagagagtcattaatatg 12528569  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
    | ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12528568 aatttcgacggttacaaccaccaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacc 12528469  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||| |||||||    
T  12528468 ttcattcttcacttcacctattttctt 12528442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 41900113 - 41900429
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||  |||||||  |||| ||||||  |||||||||||||||||||||   | ||    
T  41900113 caccggccatgactgatgcattctggaatataaaatccggaatgaacacgtgttttcaagaatttattttc-cggattaatgcgataatggtg---agcg 41900208  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------agccattaatgtgagtttt 212  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||| |||||               ||||||||||||| ||||     
T  41900209 agggaaaagttggcacttcttgtagggctaaggacactccggaatgtaaaatccaaaaagtttcagcattggattaaagagagccattaatgtgggtttg 41900308  T
Q  213 gacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcatt 312  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  41900309 gacggttacaaccactaacacattttcattgactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaataaataccttcatt 41900408  T
Q  313 cttcacttcacctcttttctt 333  Q
    |||||| | ||||||||||||    
T  41900409 cttcaccttacctcttttctt 41900429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 124 - 337
Target Start/End: Original strand, 12700468 - 12700684
Alignment:
Q  124 aacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaa 223  Q
    |||||| ||||||||| |||||| |||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||    
T  12700468 aacgagagaaaagttgacacttcctgtagggctaagggtgttccggaatgtaaaatctggaaagattcagagccattaatgtgcgtttggacagttacaa 12700567  T
Q  224 ccacga---acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcactt 320  Q
    |||| |   |||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12700568 ccaccactaacacattttcattgactgtattaatgatctaggacttgttttaggctataaataggcttccatcttcaacaaatatcttcattcttcactt 12700667  T
Q  321 cacctcttttcttacat 337  Q
     ||||||||||||||||    
T  12700668 gacctcttttcttacat 12700684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 11952421 - 11952562
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||    
T  11952421 agagccattaatgtgagtttggacggttacaaccactaacacgttttcattgactgtattaatgacaaaagacttattttaggctataaataggcttcca 11952520  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11952521 tcttcaacaaataccttcattcttcacttcacctcttttctt 11952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 23983858 - 23984177
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||| ||||||||||||  |||||||||||  |||||||||||||  |||||  ||| ||||||  | |||||||||||||||||||   | ||    
T  23983858 caccggccattactgatgcattcaagaatataaaatctggaatgcacatgtgttttccaaaatttattttc-cagattaatgcgataatggtg---agcg 23983953  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtg 206  Q
    ||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||                     ||| |||||||| |    
T  23983954 agggaaaagttggcacttcttgtagggttaaggagaatccggaatgtaaaatccggaaagattcaacattggattcttttgaaagagagtcattaatgag 23984053  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||| ||||||||||| ||||   |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  23984054 ggtttggacggttacaaccactaacatgttttcattgactgta---atgacctaggacttgttttaggctataaataggtttccatcttcaacaaatacc 23984150  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  23984151 ttcattcttcacttcacctcttttctt 23984177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 49852028 - 49851705
Alignment:
Q  30 caccggccatga-ctgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaac 126  Q
    |||||||||||| ||||||||||||| || ||||||| | ||||| || |  ||||| |||||||||||||| ||||||||| | |||||||||   |||    
T  49852028 caccggccatgaactgatgcattccgcaaaataaaatccagaatgtacctttgtttttcggaatatattttt-cggattaatacaataatggtg---aac 49851933  T
Q  127 gagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaa------------gattc---------agagccattaatgt 205  Q
    |||||||||||||||||||| ||||||| ||||||  |||||||||||| ||| ||||||            |||||         |||||||| |||||    
T  49851932 gagggaaaagttggcacttcttgtagggttaaggatgttccggaatgtataattcggaaaacttcggcatttgattcttttgaaagagagccatcaatgt 49851833  T
Q  206 gagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatac 305  Q
      |||| ||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  49851832 aggtttggacggttacaaccactaacatgttttcattgactgtactaatgacctaggacttgttttaggctataaataggctttcatcttcaacaaatac 49851733  T
Q  306 cttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||    
T  49851732 cttcattcttcacttcacctcttttctt 49851705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 197 - 333
Target Start/End: Complemental strand, 27216931 - 27216795
Alignment:
Q  197 cattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttc 296  Q
    |||||||||  |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  27216931 cattaatgtatgtttggacggttacaaccactaacacgttttcattgattgtactaatgacctaggacttgttttaggctataaataggctttcatcttc 27216832  T
Q  297 aacaaataccttcattcttcacttcacctcttttctt 333  Q
    || |||||| |||||||||||||||||||||||||||    
T  27216831 aaaaaatactttcattcttcacttcacctcttttctt 27216795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 22858932 - 22858801
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcaga 194  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  22858932 ttttccggattaatgcaataatggtggtgaacgagggaaaagttgt-acttcctgtagggctaaggacattctggaatataaaatccggaaagattcaga 22858834  T
Q  195 gccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| ||||||||||||||||||||    
T  22858833 gccattaatgtgggttttgacggttacaaccac 22858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 48964840 - 48964986
Alignment:
Q  103 attaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaa 202  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  48964840 attattgcgataatggtggcgaacgagggaaaagttg-cacttcctgtagggctaaggacattccggaatataaaatccgaaaagattcagagtcattaa 48964938  T
Q  203 tgtgagttttgacggttacaaccacgaacacgttttcattgattgtat 250  Q
    |||| |||| |||||||| || ||| |||||||||||||||| |||||    
T  48964939 tgtgggtttggacggttagaatcactaacacgttttcattgactgtat 48964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 44757585 - 44757676
Alignment:
Q  246 tgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44757585 tgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 44757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 44757444 - 44757568
Alignment:
Q  81 tttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatc 180  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |  ||||||||| |||||||||||||     
T  44757444 tttctggaatatattttc-cggattaatgcgataatggtggtgaacgagggaaaagttggcacttcctatagagtcaaggacatttcggaatgtaaaatt 44757542  T
Q  181 cggaaagattcagagccattaatgtg 206  Q
    |||||||||||| |||||||||||||    
T  44757543 cggaaagattcaaagccattaatgtg 44757568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 34549940 - 34549849
Alignment:
Q  244 attgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||| | |||| ||||||||| |||||||||||||||||| || ||| |||||||||| |||||||||||||| |||||| |||||||||    
T  34549940 attgtagttatgatctaggacttgttttaggctataaataggtttgcatattcaacaaattccttcattcttcacgtcacctgttttcttac 34549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 48964984 - 48965045
Alignment:
Q  276 tataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  48964984 tataaataggcttccatcttcaacaaatacgttcattcttcatatcacctcttttcttacat 48965045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 22858801 - 22858750
Alignment:
Q  286 cttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22858801 cttccatcttcaacaaataccttcattcttcacatcacctcttttcttacat 22858750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 30518198 - 30518279
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||| |||||||| ||||||||||||||||||||| ||| ||||| ||||  ||||||||||||||| | ||||||||||    
T  30518198 aatgacgtaggacttgttttaggctataaataggcttgcatgttcaaaaaatttcttcattcttcacttaatctcttttctt 30518279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 41366868 - 41366789
Alignment:
Q  255 gacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctta 334  Q
    |||||||||| | |||||||||||||||||| || ||| ||||||||   ||||||||| |||||||||||||| |||||    
T  41366868 gacctaggacatgttttaggctataaataggtttgcatattcaacaatctccttcattcgtcacttcacctcttctctta 41366789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 27217066 - 27216955
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    |||||||| ||||||| |||| ||||||||| |||||    |||||||| || |||||||| ||||||| ||||||| |||||| ||||| ||||||| |    
T  27217066 tgttttccagaatata-ttttccggattaatacgata---ctggtgaacaagagaaaagtttgcacttcttgtagggttaaggaaattccagaatgtata 27216971  T
Q  178 atccggaaagattcag 193  Q
    ||| |||||| |||||    
T  27216970 atctggaaagcttcag 27216955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 29913928 - 29913820
Alignment:
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    |||||||||||||||  |||| | || ||||||||||| |||| || |||||||| ||||  |||||| |||| |  |||||||||||| | ||||||||    
T  29913928 aacacgttttcattgtctgtacttataacctaggacttgttttgggttataaataagcttgaatcttctacaattttcttcattcttcattacacctctt 29913829  T
Q  329 ttcttacat 337  Q
    | |||||||    
T  29913828 tacttacat 29913820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 22817501 - 22817608
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | | |||||| ||||||||| |||||||||| ||| ||  ||||||||||  | |||||||||||  |||||||||     
T  22817501 gaacacgttttatttgactgtaattaagacctatgacttatttaaggctataaaaaggtttggatcttcaacattttccttcattctt--cttcacctcc 22817598  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  22817599 tttcttacat 22817608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 29250795 - 29250688
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | | |||||| |||| |||| ||| |||||| ||||||  ||||||||||| | |||||||||||  |||||||||     
T  29250795 gaacacgttttatttgactgtacttaagacctatgactgatttaaggttataaaaaggcttggatcttcaacaatttccttcattctt--cttcacctcc 29250698  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  29250697 tttcttacat 29250688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 22858984 - 22858936
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat 78  Q
    ||||||||||||||  |||||||||||||||| ||| ||||||||||||    
T  22858984 caccggccatgactagtgcattccggaatatacaatccggaatgcacat 22858936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 11952240 - 11952309
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcac--atgttttccggaatatatttt 97  Q
    ||||||||||||||||||||  | |||| ||||||||||||||| ||   ||||||||||||||| ||||    
T  11952240 caccggccatgactgatgcaacctggaaaataaaattcggaatgtacctttgttttccggaatatgtttt 11952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 22334962 - 22335016
Alignment:
Q  262 gacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| |||||||||||||| ||||||| ||||||||||  | ||||||||||||    
T  22334962 gacttgttttaggctataaaaaggcttcgatcttcaacattttccttcattcttc 22335016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 12524965 - 12525039
Alignment:
Q  262 gacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttca-cctcttttcttacat 337  Q
    ||||| |||||||||||||| ||||||  ||||||||||  | |||||||||||  ||||| |||||||||||||||    
T  12524965 gacttgttttaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcaccctcttttcttacat 12525039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 3475317 - 3475377
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  3475317 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 3475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 3517427 - 3517475
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat 78  Q
    |||||| ||||||||||||||||||||||||| ||| | ||| ||||||    
T  3517427 caccggtcatgactgatgcattccggaatatataatccagaaagcacat 3517475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 7564626 - 7564690
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||||||| ||||| |||||||||||||| ||| ||  ||||||||||  | ||||||||||||    
T  7564626 aatgacctatgacttgttttaggctataaaaaggtttggatcttcaacattttccttcattcttc 7564690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 18272351 - 18272291
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  18272351 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 18272291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 18277005 - 18276945
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  18277005 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 18276945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 29946819 - 29946879
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  29946819 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 29946879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 39598294 - 39598234
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  39598294 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 39598234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 41933555 - 41933615
Alignment:
Q  275 ctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||||||||||| ||||||||| || | | ||||||||||||||  | |||||||||||    
T  41933555 ctataaataggcttgcatcttcaaaaattccattcattcttcactttccatcttttcttac 41933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 1603084 - 1602781
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  1603084 caccggccatgtctgatgcattccggaatataaaatccggaaagcacacctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 1602986  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||    
T  1602985 agggaaaaattggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaatgtggatttggacggttacaaccac 1602886  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1602885 taacacgtttt-attgactgtattaatgacctaggacttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcacttcacctct 1602787  T
Q  328 tttctt 333  Q
    ||||||    
T  1602786 tttctt 1602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 31093407 - 31093103
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  31093407 caccggccatgactgatgcattccggaatataaactctggaatgcacacctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 31093309  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  31093308 agagaaaagttggcacttcctgtagggctaaggacattccggaatgtaaactccggaaagattcagagccattattgtgggtttggacggttacaaccac 31093209  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||| | ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31093208 taacacgatctcattgactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 31093109  T
Q  328 tttctt 333  Q
    ||||||    
T  31093108 tttctt 31093103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 35159019 - 35158716
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  35159019 caccggccatgactgatgcattccggaatattaaatccggaatgcacacctgttttc-ggaatatattttc-cggattaatgcgataatggtggcgaacg 35158922  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||||| ||||||    
T  35158921 agagaaaagttggcacttcctgtagggctaaggacattccggaatgtaaactccggaaagattcagagccattattgtgggtttggacggttagaaccac 35158822  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35158821 taacacgttttcatttactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 35158722  T
Q  328 tttctt 333  Q
    ||||||    
T  35158721 tttctt 35158716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 30003914 - 30003608
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30003914 caccggccatgactgatgcattccggaatataaaatccggaatgcacacttgtttttcggaatatattttt-cggattaatgcgataatggtggtgaacg 30003816  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| |||| |||| ||||||||||| ||     
T  30003815 agagaaaagttggcacttcctgtagggataaggacattccggaatgtaaactccggaaagattcagagtcattattgtgggtttggacggttacaagcaa 30003716  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttatt--ttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacct 325  Q
     |||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30003715 taacacgttttcattgactgtattaatgacctaggacttgtttattaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacct 30003616  T
Q  326 cttttctt 333  Q
    ||||||||    
T  30003615 cttttctt 30003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 33281384 - 33281083
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| |||| ||||||||||||||||||||||||| || |||||| ||  ||||| |||||||||||||  |||||||||||||||||||||   ||||    
T  33281384 caccgcccattactgatgcattccggaatataaaatccgaaatgcatatctgtttttcggaatatattttc-cggattaatgcgataatggtg---aacg 33281289  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  33281288 agagaaaagttggcacttcctgtagggctaaggacattccggaatgtaaaatccagaaagattcagagccattaatgtgggtttggacggttacaaccac 33281189  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33281188 taacacgttttcattgattgtattaatgacctaagacttgttttaggctataaataggcttacatcttcaacaaataccttcattcttcacttcacctct 33281089  T
Q  328 tttctt 333  Q
    ||||||    
T  33281088 tttctt 33281083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 40728327 - 40728019
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||| | |||||||||||||||| || | | ||||||||||||  ||||| |||||||| ||||  ||||||||| ||||||||||||||||||    
T  40728327 caccggccatcattgatgcattccggaatctacattccggaatgcacatatgttttacggaatatgttttc-cggattaatacgataatggtggtgaacg 40728229  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | || ||||||||||||    
T  40728228 aggaaaaagttggcacttcctgtagggctaaggacattccggaatataaaatccggaaagattcatagccattaatgtgggtatggatggttacaaccac 40728129  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  40728128 taacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcacatcacctct 40728029  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  40728028 tttcttacat 40728019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 16024166 - 16023866
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgttttccggaatatattttttcggattaatgcgataatggtggtgaacgag 129  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||| | |      |||||||||  ||||||||||||||||||||||||||||||    
T  16024166 caccggccatgactgatgcattccggaatatataatccggaaagcacatctgt------atatattttc-cggattaatgcgataatggtggtgaacgag 16024074  T
Q  130 ggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacga 229  Q
    | ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||| |    
T  16024073 gaaaatgttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaatgtgggtttggacggttgcaaccacta 16023974  T
Q  230 acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttt 329  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16023973 acacgttttcattgactgtattaataacctatgacttgttttaggctataaataggcttccatattcaacaaataccttcattcttcacttcacctcttt 16023874  T
Q  330 tcttacat 337  Q
    ||||||||    
T  16023873 tcttacat 16023866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 55136968 - 55136658
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt-tttccggaatatattttttcggattaatgcgataatggtggtgaacga 128  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||| | |||||||||||||||||  |||||||||| ||||||||||||||| ||    
T  55136968 caccggccatgactgatgcattccggaatataaaatctgaaatgcacatctatttccggaatatattttc-cggattaatgtgataatggtggtgaaaga 55136870  T
Q  129 gggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac---c 225  Q
    ||||||||||| |||||| || |||||||||| | |||||||||||||||| || ||||||||| | ||||||||||| |||| ||||||||||||   |    
T  55136869 gggaaaagttgacacttcctgcagggctaagggcgttccggaatgtaaaattcgaaaagattcaaatccattaatgtgggtttggacggttacaacaacc 55136770  T
Q  226 acgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacct 325  Q
    || |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55136769 actaacacgttatcattgattgtattaatgacctatgacttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcacttcacct 55136670  T
Q  326 cttttcttacat 337  Q
    ||||||||||||    
T  55136669 cttttcttacat 55136658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 28780612 - 28780920
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||| ||||||||||| | |||| || | | ||||||||||||  |||||||||||||| ||||  | |||||||||||||||||||| |||||    
T  28780612 caccggccatcactgatgcatttcagaatctacattccggaatgcacatatgttttccggaatatgttttc-ctgattaatgcgataatggtggcgaacg 28780710  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||| |||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||| | |||||||||||||    
T  28780711 aggaaaaaattggcacttcctgtagggctaaggacattccggaatataaaatctggaaagattcagagccattaatgtggttttgggcggttacaaccac 28780810  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28780811 taacacgttttcattgactgtattaatgacatatgacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacatcacctct 28780910  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  28780911 tttcttacat 28780920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 45229370 - 45229063
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| ||| | |||  ||||| |  |||| ||||||| ||||  || |||||||||||||| ||||||||||    
T  45229370 caccggccatgactgatgcattccggaatatacaatccagaacacacatctgctttctggaatatgttttc-cgaattaatgcgataatagtggtgaacg 45229272  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  45229271 agggaaaagttg-cacttcctgtatggctaaggacattccggaatataaaatccggaaagattcagagccattaatgtgggtttggacggttacaaccac 45229173  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||    
T  45229172 taacacgttttcatggactgtattaatgacctaggacttgttttaggctataaataggattccatcttcaacaaatatattcattcttcacatcacctct 45229073  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  45229072 tttcttacat 45229063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 52416770 - 52417078
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||   ||||    
T  52416770 caccgaccatgactaatgcattccggaatataaaatccggaatgcacatctgttttccgaaatatattttc-cggattaatgcgataatggtg---aacg 52416865  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| |||||| | ||||||||||| | || ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||       
T  52416866 agagaaaagttgacacttcctatagggctaagggcgtttcggaatgtaaattccggaaagattcagagccattaatgtgggtttggacggttacaacaac 52416965  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52416966 cactaacacgttttcattgactgtattaatgacctaagacttgttttaggctataaataggcttccatcttcaacaaataccctcattcttcacttcacc 52417065  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  52417066 tcttttcttacat 52417078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 49374615 - 49374315
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||  |||||||||| |||||||||||   |||    
T  49374615 caccggccatggctgatgcattccggagtataaaatccggaatgcacatctgttttccggaatatattttc-cggattaatgtgataatggtgg---acg 49374520  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||| ||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  49374519 agggaaaagttgacacttcctgtagggctaacgatgttccagaatgtaaaatccggaaagattcagagccattaatgtgggtttggacagttacaaccac 49374420  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  49374419 taacacgttttcattgactgta-taatgacctatgacttgttttaggctataaataggcttccatcttcaacaaaaacctccattcttcacttcacctct 49374321  T
Q  328 tttctt 333  Q
    ||||||    
T  49374320 tttctt 49374315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 344
Target Start/End: Original strand, 9035937 - 9036251
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||  |||||||||||||||||||||   ||||    
T  9035937 caccggccatgactgatgcattctggaatataaaatccggaatgcacatctgttttccggaatatattttc-cggattaatgcgataatggtg---aacg 9036032  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| |||||  ||||||||||||| | ||  |||||||||||||   |||||||||||| |||||||||| |||| ||||||||||||       
T  9036033 agagaaaagttgacactttttgtagggctaagggcgttttggaatgtaaaatctttaaagattcagagtcattaatgtgggtttggacggttacaacaac 9036132  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  9036133 cactaacacgttttcattgactgtattaatgacttaggactt-ttttaggctataaataggctttcatcttcaacaaatacattcattcttcatttcacc 9036231  T
Q  325 tcttttcttacatattattc 344  Q
    ||||||||||||| ||||||    
T  9036232 tcttttcttacattttattc 9036251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 45462538 - 45462248
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgttttccggaatatattttttcggattaatgcgataatggtggtgaacgag 129  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||  | ||             || ||||||||||||||||||||||||||||||    
T  45462538 caccgaccatgactgatgcattccggaatataaaatccggaatgcacacctctt-------------ttccggattaatgcgataatggtggtgaacgag 45462452  T
Q  130 ggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacga 229  Q
     ||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||      
T  45462451 agaagagttggcacttcctgtagggctaaggacattccggaatgtaaactccggaaagattcagagccattattgtgggtttggacggttacaaccactg 45462352  T
Q  230 acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttt 329  Q
    ||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||    
T  45462351 acacgttttcattgactgtattaatgatctatgacttgttttaggctataaatagactttcatcttcaacaaatatcttcattcttcacttcacctattt 45462252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 78 - 337
Target Start/End: Original strand, 38218149 - 38218410
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    |||||| || ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  38218149 tgtttttcgaaatatattttc-cgaattaatgcgataatggtggtgaacgagggaaaagttggcacttcctatagggctaaggacattccggaatgtaaa 38218247  T
Q  178 atccggaaagattcagagccattaatgtgagttttgacggtt---acaaccacgaacacgttttcattgattgtattaatgacctaggacttattttagg 274  Q
    |||||||||| || ||||||| ||||||| |||| |||| ||   |||||||| |||||||||||||||| |||||||||||||||| |||| ||||||     
T  38218248 atccggaaaggtttagagccactaatgtgggtttggacgattacaacaaccactaacacgttttcattgactgtattaatgacctagaacttgttttagc 38218347  T
Q  275 ctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  38218348 ctataaataggcttccatcttcaacaaatacctacattcttcacttcacctctttttttacat 38218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 51538881 - 51538642
Alignment:
Q  95 tttttcggattaatgcgataatggtggt-gaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag 193  Q
    ||||||||||| |||||||||||||| | ||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51538881 tttttcggattgatgcgataatggtgatcgagggagggaaaagtttgcacttcctgtagggctaaggacattccggaatgtaaaatccggaaagattcag 51538782  T
Q  194 agccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatc 293  Q
     |||||||||||| |||| ||| ||| ||||||| |||| ||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||    
T  51538781 ggccattaatgtgggtttggacagttgcaaccaccaacatgttttcattgactgtattaatgacttaggacttgttttaggctataaatatgcttccatc 51538682  T
Q  294 ttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  51538681 ttcaacaaataccttcattcttcacttcacctcttttctt 51538642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 30 - 310
Target Start/End: Original strand, 56463484 - 56463767
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  56463484 cacctgccatgactgatgcattccggaatatataattcggaaagcacatctgttttccggaatatattttt-cagattaatgcgataatggtggtgaacg 56463582  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    ||||||| |||| |||||| | || |||||||||| ||  ||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||       
T  56463583 agggaaa-gttgacacttcctataaggctaaggacgttttggaatgtaaaatccggaaagactcggagccattaatgtgggtttggacggttacaacaac 56463681  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttca 310  Q
    ||| ||||| |||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  56463682 cactaacacattttcattgactgtattaatgaccgtggacttgttttaggctataaataggcttccatcttcaacaaataccttca 56463767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 6963773 - 6963451
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||  |||||||||||||| ||||||   ||||    
T  6963773 caccgaccatgactgatgcattccggaatataaaatatggaatgcacatatgttttccggaatatatttta-cggattaatgcgatgatggtg---aacg 6963678  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    |||||||||||| |||||| ||||||||||||| | |||||||||||||||||||||||| |||||                     |||||||||||||    
T  6963677 agggaaaagttgacacttcttgtagggctaagggcgttccggaatgtaaaatccggaaagtttcagcattggattcttttgaaagagagccattaatgtg 6963578  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||| ||| ||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6963577 ggtttggacggttacaatcactaacacattttcattgactatagtaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 6963478  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  6963477 ttcattcttcacttcacctcttttctt 6963451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 78 - 337
Target Start/End: Original strand, 43841761 - 43842022
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    |||||| | |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| | || |||||| ||||||||||||||||||    
T  43841761 tgtttttcagaatatattttc-cggattaatgcgataatggtcgtgaacgagggaaaagttggcacttcctataaggctaatgacattccggaatgtaaa 43841859  T
Q  178 atccggaaagattcagagccattaatgtgagttttgacggtt---acaaccacgaacacgttttcattgattgtattaatgacctaggacttattttagg 274  Q
    ||||||||||||||| ||||||||||||| |||| |||||||   |||||||| || ||||||| ||||| ||||||||||||||| ||||| |||||||    
T  43841860 atccggaaagattcatagccattaatgtgggtttggacggttacaacaaccactaagacgttttaattgactgtattaatgacctatgacttgttttagg 43841959  T
Q  275 ctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||| ||| |||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  43841960 ctataaatagactttcatcttcaacaaatacattcattcttcaattcacctattttcttacat 43842022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 4189693 - 4190015
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| |||||||||||||||||| ||| |||||||| ||||||| ||||  |||||||||||||||||||  |||||||||||||||||||||   ||||    
T  4189693 caccagccatgactgatgcattctggagtataaaatccggaatgaacatctgttttccggaatatattttc-cggattaatgcgataatggtg---aacg 4189788  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    ||||||||||||||||||| |||||||| |||||| || ||||||||||||| ||||||| |||||                     || ||||||||||    
T  4189789 agggaaaagttggcacttcttgtagggcaaaggacgtttcggaatgtaaaattcggaaagcttcagcattggattcttttgaaagagagtcattaatgtg 4189888  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||||||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4189889 ggtttggacggttacaaccactaacacgtttttattgactatattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacc 4189988  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  4189989 ttcattcttcacttcacctcttttctt 4190015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 45924917 - 45924595
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||| ||||||  |||||||||||||||||||||   ||||    
T  45924917 caccggccatgactgatgcattccagaatataaaatccggaatgcacatctgttttccggaatttattttc-cggattaatgcgataatggtg---aacg 45924822  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtg 206  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||| ||||                     ||||||||||||||    
T  45924821 agggaaaagttggcacttcctgtagggctaaggacactccgaaatgtaaaatctggaaagcttcaccattatattcttttgaaagagagccattaatgtg 45924722  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||    
T  45924721 ggtttggacggttgcaaccactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggtttcaatcttcaacaaatacc 45924622  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    ||||||| |||||| ||||||||||||    
T  45924621 ttcattcctcacttaacctcttttctt 45924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 33 - 333
Target Start/End: Complemental strand, 4048447 - 4048130
Alignment:
Q  33 cggccatgactgatgcattccggaatataaaattcggaatgcacatgttttccggaatatattttttcggattaatgcgataatggtggtgaacgaggga 132  Q
    ||||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||  ||||||||| |||| ||||||   |||||| ||    
T  4048447 cggccatgactgatgcattccggaatataaaatccgtaatgcactttttttccggaatatattttc-cggattaatacgatgatggtg---aacgagaga 4048352  T
Q  133 aaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtgagttt 211  Q
    || ||| ||||||| ||||||||||||||| |||||||||||  |||||| |||| ||||                     ||| |||||||||  ||||    
T  4048351 aatgtttgcacttcttgtagggctaaggacgttccggaatgtttaatccgaaaagcttcaacattggattattttgaaagagagtcattaatgtaggttt 4048252  T
Q  212 tgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcat 311  Q
     ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4048251 ggacggttacaaccactaacacgttttcattgattgtattaataacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcat 4048152  T
Q  312 tcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||    
T  4048151 tcttcacttcacctcttttctt 4048130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 2013552 - 2013874
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||  |||||||||| ||||||  |  ||||||||||||||||||   | ||    
T  2013552 caccggccatgactgatgcattctggaatataaaatccgaaatgcacatgtattttccggaatttattttc-caaattaatgcgataatggtg---agcg 2013647  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattc---------------------agagccattaatgtg 206  Q
    |||||||| |||||| ||| |||||||||||||||| ||| ||||||||||||| |||||||||                     |||| ||||||||||    
T  2013648 agggaaaaattggcatttcttgtagggctaaggacactccagaatgtaaaatcctgaaagattcggcattggattcttttgaaagagagtcattaatgtg 2013747  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
      ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2013748 gatttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaattggcttccatcttcaacaaatacc 2013847  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  2013848 ttcattcttcacttcacctcttttctt 2013874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 41 - 333
Target Start/End: Original strand, 38551100 - 38551411
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagtt 138  Q
    |||||||||||||| || |||||||| ||||||||| |  |||||||| ||||||||||  ||||||||| |||||||||||   |||||||||||||||    
T  38551100 actgatgcattccgaaaaataaaatttggaatgcacctttgttttccgaaatatattttc-cggattaatacgataatggtg---aacgagggaaaagtt 38551195  T
Q  139 ggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtgagttttgacgg 217  Q
    |||||||| ||||||| ||||||| ||||||||| |||||||||||||| |||||                     ||||||||||||  |||| |||||    
T  38551196 ggcacttcttgtagggttaaggacgttccggaatctaaaatccggaaagcttcagcattggattcttttgaaagagagccattaatgtaggtttggacgg 38551295  T
Q  218 ttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttca 317  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38551296 ttacaaccactaacacgttttcattgactgtactaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttca 38551395  T
Q  318 cttcacctcttttctt 333  Q
    |||||| |||||||||    
T  38551396 cttcacatcttttctt 38551411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 168359 - 168681
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||||| ||||||| |||||||||||  | |||||||||||  ||||| |||||||||||  |||||||||||||||||||||   ||||    
T  168359 caccagccatgactgaagcattccagaatataaaatctgaaatgcacatgtggtttccagaatatattttc-cggattaatgcgataatggtg---aacg 168454  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtg 206  Q
    ||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||| ||||                     |||||| |||||||    
T  168455 agggaaaagttggcacttcctgtagggttaagggcgttccggaatgtaaaatccggaaagcttcaacattggattcttttgaaagagagccactaatgtg 168554  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| |||| |||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||    
T  168555 ggtttggacgtttacaaccactaacacgttttcattgactgtattaatgacctatgacttgttttagactataaatagccttccatcttcaacaaatacc 168654  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  168655 ttcattcttcacttcacctcttttctt 168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 35319716 - 35320037
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||| |||||||||| |||||||||| ||||||||||||  ||||| || ||||||||||  |||||||||||||||||||||   ||||    
T  35319716 caccagccatgactaatgcattccgaaatataaaatccggaatgcacatctgtttttcgaaatatattttc-cggattaatgcgataatggtg---aacg 35319811  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtg 206  Q
    || ||||||||| |||||| |||||||||||||   |||| ||||||||||||||||||| |||||                     || ||||||||||    
T  35319812 agagaaaagttgacacttcctgtagggctaagggg-ttccagaatgtaaaatccggaaagcttcagcattggattcttttgaaagagagtcattaatgtg 35319910  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
    ||||| |||||||||||| || |||||||||||||| | | || |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||     
T  35319911 agtttggacggttacaactactaacacgttttcattaactatagtaatgacctatgacttgttttaagctataaataggcttccatcttcaacaaatact 35320010  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||| ||||||||||||||||||    
T  35320011 ttcattctccacttcacctcttttctt 35320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 82 - 333
Target Start/End: Complemental strand, 16452195 - 16451927
Alignment:
Q  82 ttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatcc 181  Q
    ||||||| |||||||||| | |||||| |||||||||||   |||||||||||||||| |||||| ||||||||||||||  |||||||||||| |||||    
T  16452195 ttccggattatatttttt-gtattaatacgataatggtg---aacgagggaaaagttgacacttcttgtagggctaaggaagttccggaatgtataatcc 16452100  T
Q  182 ggaaagattca---------------------gagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgaccta 260  Q
    |||||| ||||                     ||| |||||||||  ||||  |||||||||||||| |||||||||||||||| |||| |||||| |||    
T  16452099 ggaaagcttcaacattggattcttttgaaagagagtcattaatgtatgtttgaacggttacaaccactaacacgttttcattgactgtagtaatgatcta 16452000  T
Q  261 ggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  16451999 ggacttgttttaggctataaataggcttccatcttcagcagataccttcattcttcacttcacctcttttctt 16451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 15542841 - 15542981
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    ||||| ||||||||| |||| |||||||| ||| || |||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||||    
T  15542841 agagcaattaatgtgggtttggacggttaaaac-actaacacgttttcattgactatagtaatgacctaggacttgttttaggctataaataggcttcca 15542939  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15542940 tcttcaacaaataccttcattcttcacttcacctcttttctt 15542981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 95 - 330
Target Start/End: Original strand, 28310775 - 28311029
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag- 193  Q
    |||| ||||||||| |||||||||||   |||||| |||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||||| |||||     
T  28310775 ttttccggattaatacgataatggtg---aacgagagaaaagttggcacttcttgtagggctaaggacgttctggaatgtataatccggaaagcttcagc 28310871  T
Q  194 --------------------agccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggactta-tttta 272  Q
                        || |||||||||| ||||  |||||||||||||| ||||||||||||||||  |||||||||||||| |||||  |||||    
T  28310872 attggattcttttgaaagagagtcattaatgtgggtttgaacggttacaaccactaacacgttttcattgaccgtattaatgacctaagactttgtttta 28310971  T
Q  273 ggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctttt 330  Q
      ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28310972 tactataaataggcttccatcttcaacaaataccttcattcttcatttcacctctttt 28311029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 39807338 - 39807422
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||| |||||| || ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  39807338 atgatctaggatttgttttacgctataaataggctttcatcttcaacaaattccttcattcttcacttcacctcttttcttacat 39807422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 34953600 - 34953707
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | |||| |||||||||||||||||||||||||||| || |||||||||||||   ||| |||||||||||||||| |    
T  34953600 gaacacgttttatttgactgtagttatgatctaggacttattttaggctataaataggtttgcatcttcaacaaacttctttattcttcacttcaccttt 34953699  T
Q  328 tttcttac 335  Q
    ||||||||    
T  34953700 tttcttac 34953707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 40602818 - 40602736
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||| ||||||||| ||| | ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  40602818 atgatctaggacttgtttaatgctataaataggcttacatcttcaacaaactccttcattcttcacttcacctcttttcttac 40602736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 20516741 - 20516661
Alignment:
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattct---tcacttcacctcttttcttac 335  Q
    |||||| || ||||||||||||||||||||| |||||||||||||| ||||||||||   |||||||||||||||||||||    
T  20516741 ctaggatttgttttaggctataaataggcttgcatcttcaacaaattccttcattcttcatcacttcacctcttttcttac 20516661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 56084201 - 56084107
Alignment:
Q  241 ttgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||||| | |||| ||||||||| ||| |||||||||||| |||| ||| |||||||||| | ||||||||||||||| | |||||||||||    
T  56084201 ttgattgtagttatgatctaggacttgtttaaggctataaatatgcttgcatattcaacaaattcattcattcttcacttctcatcttttcttac 56084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 49604553 - 49604493
Alignment:
Q  275 ctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||    
T  49604553 ctataaataggcttgcatcttcaacaaattccttcattgatcacttcacctcttttcttac 49604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 52499598 - 52499550
Alignment:
Q  100 cggattaatgcgataatggtggtgaacgagggaaaagttggcacttcat 148  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52499598 cggattaatgcgataatggtggtgaacgagggaatagttggcacttcat 52499550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 15542669 - 15542738
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatatttt 97  Q
    |||||||||||||||||||||| ||||| |||||||  |||||| |||  |||||||| |||||||||||    
T  15542669 caccggccatgactgatgcatttcggaaaataaaatctggaatgtacatctgttttccagaatatatttt 15542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 9183338 - 9183387
Alignment:
Q  272 aggctataaataggcttccatcttcaacaaataccttcattcttcacttc 321  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  9183338 aggctataaattggctttcatcttcaacaaattctttcattcttcacttc 9183387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 28310723 - 28310769
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcac 76  Q
    ||||| ||||||||||||||||  |||||||||||| ||||||||||    
T  28310723 caccgaccatgactgatgcattatggaatataaaatccggaatgcac 28310769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 13721433 - 13721373
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  13721433 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 13721373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 16684296 - 16684356
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  16684296 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 16684356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 37013125 - 37012821
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  37013125 caccagccatgactgatgcattccggaatataaaattcggaattcacatctgttttccggaatatattttt-cggattaacgcgatattggtggtgaacg 37013027  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||||||||||| | |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  37013026 agggaaaagttggcacttcctatagggctaaggacactccgaaatgtaaaatccgaaaagattcagagccattaatgtgggtttggacggttacaaccac 37012927  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37012926 taacacgttttcattgactgtatgaatgacctagaacttgttttaggctataaataggcttccatcttcaacaaatactttcattcttcacttcacctct 37012827  T
Q  328 tttctt 333  Q
    ||||||    
T  37012826 tttctt 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 27114602 - 27114301
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| |||||||||| |  |||||| ||||||||||||||   ||||    
T  27114602 caccggccatgactgatgcattccggaatataaaatttggaatgcacatctgttttctggaatatattatc-cggattcatgcgataatggtg---aacg 27114507  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27114506 agggaaaaattggcacttcctatagggctaaggacattccagaatgtaaaatccggaaagattcagagccattaatgtgggtttggacggttacaaccac 27114407  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27114406 caacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggcttccatcttcaacaaatatcttcattcttcacttcacctct 27114307  T
Q  328 tttctt 333  Q
    ||||||    
T  27114306 tttctt 27114301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 3556922 - 3556618
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3556922 caccggcaatgactgatgcattccgaaatataaaattcggaatgcacacctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 3556824  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| |||| |||| |||| |||||| |||    
T  3556823 agagaaaagttggcacttcctgtagggctaaggacattccagaatgtaaactccggaaagattcggagccgttattgtgggtttggacgattacaagcac 3556724  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  3556723 taacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatatgcttccatctttaacaaattccttcattcttcacttcacctct 3556624  T
Q  328 tttctt 333  Q
    ||||||    
T  3556623 tttctt 3556618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 337
Target Start/End: Complemental strand, 8734988 - 8734687
Alignment:
Q  36 ccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaa 133  Q
    ||||||||||||||||| ||||| || ||| ||||| ||||||  |||||||||||||||||||  || |||||||||||||||||||||||||| ||||    
T  8734988 ccatgactgatgcattctggaatttataatccggaaagcacatctgttttccggaatatattttc-cgaattaatgcgataatggtggtgaacgaaggaa 8734890  T
Q  134 aagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacac 233  Q
    |||||| |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||    
T  8734889 aagttgacacttcctatagagctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacgattacaaccactaacac 8734790  T
Q  234 gttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  8734789 gttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatc-tgaacaaataccttcattcttcacttcacctcttttctt 8734691  T
Q  334 acat 337  Q
    ||||    
T  8734690 acat 8734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 12785457 - 12785147
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||| ||||| ||||||| ||||||||| ||||||  |||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  12785457 caccggccatgactgatgtattccagaatatataattcggaaagcacatctgttttccggaatatattttc-cggattaatgcgataatagtggtgaacg 12785359  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    ||||||| ||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||| |||| |||||||| |||| ||||||||||||       
T  12785358 agggaaa-gttggcacttcctgtagggttaaggacattctggaaagtaaaatccggaaagattcatagccgttaatgtgggtttggacggttacaacaac 12785260  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12785259 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttcaatcttcaacaaataccttcattcttcacttcacc 12785160  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  12785159 tcttttcttacat 12785147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 12723970 - 12723664
Alignment:
Q  34 ggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgaggg 131  Q
    |||||||||||||| ||||| ||||||| ||||||||| ||||||  |||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  12723970 ggccatgactgatgtattccagaatatataattcggaaagcacatctgttttccggaatatattttc-cggattaatgcgataatagtggtgaacgaggg 12723872  T
Q  132 aaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac---cacg 228  Q
    ||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| || | |||||||| |||| ||||||||||||   |||     
T  12723871 aaa-gttggcacttcctgtagggctaaggacattctggaaagtaaaatccggaaagattcatagtcgttaatgtgggtttggacggttacaacaaccact 12723773  T
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  12723772 aacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggttttcatcttcaacaaataccttcattcttcacttcacctctt 12723673  T
Q  329 ttcttacat 337  Q
    |||||||||    
T  12723672 ttcttacat 12723664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 82 - 337
Target Start/End: Complemental strand, 8197658 - 8197401
Alignment:
Q  82 ttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatcc 181  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||    
T  8197658 ttccggaatatatttttg-ggattaatgcgataatggtggtgaacgagggaaaagttggtacttcctatagggctaaggacattccagaatgtaaaatcc 8197560  T
Q  182 ggaaagattcagagccattaatgtgagttttgacggtta---caaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctat 278  Q
    ||||||||| ||||||||||||||| |||| ||||||||   ||||||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  8197559 ggaaagatttagagccattaatgtgggtttggacggttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttagactat 8197460  T
Q  279 aaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8197459 aaataggcttccatcttcaacaaataccttcattcttcactttacctattttcttacat 8197401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 16513427 - 16513733
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||||  ||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  16513427 caccggccatgactgatgcttttcggaatataaaatacggaatgcacacctgttttccggaatatattttc-cggattaatgcgataatggtggcgaacg 16513525  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    || |||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||   |||   |||||    
T  16513526 agagaaaagttggcacttcctatagggctaaggacattccggaatgtaaactccagaaagattcagagccattattgtg-gttttgtacgttacaacaac 16513624  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| ||||||||||||| || ||||||||||||||| ||||| |||||  ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16513625 cactaacacgttttcatcgactgtattaatgacctatgacttgttttaaactataaataggcttcaattttcaacaaataccttcattcttcacttcacc 16513724  T
Q  325 tcttttctt 333  Q
    |||||||||    
T  16513725 tcttttctt 16513733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 18809282 - 18808974
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||  ||||||| |||||||||||  |||||||||||||||||||||   |||     
T  18809282 caccgaccatgactgatgcattccggaatataaaatctggaatgcacatctgttttccagaatatattttc-cggattaatgcgataatggtg---aaca 18809187  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| |||||| ||||||||||| | |  || ||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||       
T  18809186 agagaaaagttgacacttcctgtagggctaaaggcgatctggaatgtaaaatccgaaaagattcagagccattaatgtaggtttggacggttacaacaac 18809087  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18809086 cactaacacgttttcattgactgtattaatgacctatgacttgttttaggctataaatagtcttccatcttcaacaaataccttcattcttcacttcacc 18808987  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  18808986 tcttttcttacat 18808974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 13821909 - 13822217
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||| |  ||||| |||||||||||  |||||||||||||||||||||   || |    
T  13821909 caccggccatgactgatgcattccagaatataaaatctggaatgcacatctattttcctgaatatattttc-cggattaatgcgataatggtg---aatg 13822004  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| |||||| ||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||  |||  |||||||||||       
T  13822005 agagaaaagttgacacttcctgtagggctaagggcgttccgaaatgtaaaattcggaaagattcagagccattaatgtggatttgaacggttacaacaac 13822104  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  13822105 cactaacacgttttcattgactgtattaatgatctatgacttgttttaggctataaataggtttccatcttcaacaaataccttcattcttcacctcacc 13822204  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  13822205 tcttttcttacat 13822217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 95 - 337
Target Start/End: Original strand, 38679353 - 38679597
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcaga 194  Q
    |||| |||| |||||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  38679353 ttttccggaataatgcgataatggtggtaaacgagggaaa-gttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcaga 38679451  T
Q  195 gccattaatgtgagttttgacggttacaac---cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    ||||||||||||  ||| ||||||||||||   ||| ||||| ||| |||||| |||||||||||| |||||||| |||||||||||||||||||||| |    
T  38679452 gccattaatgtggatttggacggttacaacaaccactaacacttttgcattgactgtattaatgacttaggacttgttttaggctataaataggcttcaa 38679551  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  38679552 tcttcaacaaatatctacattcttcacttcacctcttttcttacat 38679597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 37883743 - 37883421
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||  |||||||||||||||||||||   ||||    
T  37883743 caccggccatgactgatgcattccggaatataaaatccggaatgcacatctgtttttcggaatatattttc-cggattaatgcgataatggtg---aacg 37883648  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaag------------attc---------agagccattaatgtg 206  Q
    || |||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||            ||||         |||||||||||||||    
T  37883647 agagaaaagttggcacttcctgtagggctaagggcattccagaatgtaaaattcggaaagcttaagcattggattcttttgaaagagagccattaatgtg 37883548  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||| ||||||||||| | || |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  37883547 ggtttggacggttacaaccactaacatgttttcattgactatagtaatgacctaagacttgttttaagctataaataggcttccatcttcaacaaatacc 37883448  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||| |||||||||    
T  37883447 ttcattcttcacttcacatcttttctt 37883421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 30 - 289
Target Start/End: Original strand, 8299056 - 8299319
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||| | ||||||| ||| | ||| ||||||  |||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  8299056 caccggccatgactgatgcatttctgaatatataatccagaaagcacatctgttttccggaatatattttc-cggataaatgcgataatggtggtgaacg 8299154  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||  ||||||   |||||    
T  8299155 agggaaaagttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaatttgggtttgaacggttacaacaac 8299254  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttc 289  Q
    ||| |||||||||| ||||| ||||||||||||||| || || ||||||||||||||||| ||||    
T  8299255 caccaacacgtttttattgactgtattaatgacctaagaattgttttaggctataaatagacttc 8299319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 119 - 333
Target Start/End: Original strand, 37030168 - 37030402
Alignment:
Q  119 tggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agcc 197  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| |||||                     ||||    
T  37030168 tggtgaacgagggaaaagttggcacttcctatagagctaaggacattccggaatgtaaaatc-ggaaagcttcagcattggattcttttgaaagagagcc 37030266  T
Q  198 attaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttca 297  Q
    ||||||||| |||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37030267 attaatgtgggtttggatggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagacttccatcttca 37030366  T
Q  298 acaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||||||||||    
T  37030367 acaaataccttcattcttcacttcacctcttttctt 37030402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 26279354 - 26279031
Alignment:
Q  30 caccggccatgac--tgatgcattccggaatataaaattcggaatgcacatgt-tttccggaatatattttttcggattaatgcgataatggtggtgaac 126  Q
    |||||||||||||  |||| ||||| |||| ||||||| |||||||||| | | ||| |||||||  ||||  ||||||||| |||||||||||   |||    
T  26279354 caccggccatgacactgattcattctggaaaataaaatccggaatgcacctttgttttcggaatacgttttc-cggattaatacgataatggtg---aac 26279259  T
Q  127 gagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgt 205  Q
    |||||||||||||||||||| ||||||| ||||||| || ||||||||| ||| ||||||| ||||                     ||| |||||||||    
T  26279258 gagggaaaagttggcacttcttgtagggttaaggacgtttcggaatgtataattcggaaagcttcaacattggattctcttgaaagagagtcattaatgt 26279159  T
Q  206 gagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatac 305  Q
      |||| ||||||||||||||| |||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26279158 aggtttggacggttacaaccactaacacgttttcattgactgtactaatgacccaggacttgttttaggctataaataggcttccatcttcaacaaatac 26279059  T
Q  306 cttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||| |||||||||    
T  26279058 cttcattcttcacttcacttcttttctt 26279031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 41 - 333
Target Start/End: Original strand, 11719768 - 11720080
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaa-gt 137  Q
    ||||||||| |||| || ||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    ||||||||||| ||    
T  11719768 actgatgcagtccgaaaaatataatccggaatgcacatctgttttccggaatatattttt-cggattaatgcgataatggtg----acgagggaaaaagt 11719862  T
Q  138 tggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaag------------attc---------agagccattaatgtgagttttgacg 216  Q
    ||||||||| || |||| |||||| ||| | ||||||| |||||||||||            ||||         ||||||||||||||  ||||  |||    
T  11719863 tggcacttcttgcagggttaaggaaatttcagaatgtataatccggaaagcatcaacattgaattcttttgaaagagagccattaatgtaggtttgaacg 11719962  T
Q  217 gttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattc-tt 315  Q
    ||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||    
T  11719963 gttacgaccactaacacgttttcattgactgtactaatgacctaggacttattttaggccataaatagactttcatcttcaacaaataccttcattcttt 11720062  T
Q  316 cacttcacctcttttctt 333  Q
    ||||||||||||||||||    
T  11720063 cacttcacctcttttctt 11720080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 25976952 - 25977272
Alignment:
Q  30 caccggccatgac--tgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaa 125  Q
    |||||||||||||  ||||||| ||||||| ||||||| ||||||| || |  |||||||||||||||||||  | ||||||| |||||||||||   ||    
T  25976952 caccggccatgacactgatgcagtccggaaaataaaatccggaatgtacctttgttttccggaatatattttc-cagattaatacgataatggtg---aa 25977047  T
Q  126 cgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatg 204  Q
    ||||| ||||||||||||||| ||||||| ||||||  |||||||||||| |||| |||||| ||||                     ||| ||||||||    
T  25977048 cgaggaaaaagttggcacttcttgtagggttaaggaagttccggaatgtataatcgggaaagcttcaacattggattcttttgaaagagagtcattaatg 25977147  T
Q  205 tgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaata 304  Q
    |  |||| |||| |||||||||| |||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||    |    
T  25977148 taggtttggacgattacaaccactaacacgttttcattgactgtagtaatgacttaggacttgttttaggttataaataggcttccatcttcaac----a 25977243  T
Q  305 ccttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||||    
T  25977244 ccttcattcttcacttcacctcttttctt 25977272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 208 - 333
Target Start/End: Original strand, 9715328 - 9715453
Alignment:
Q  208 gttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacct 307  Q
    |||| ||||||||||||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  9715328 gtttggacggttacaaccaccaacacgttttcattgactgcactaatgacctatgactttttttaggctataaatagacttccatcttcaacaaatagct 9715427  T
Q  308 tcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||    
T  9715428 tcattcttcacttcacctcttttctt 9715453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 15858880 - 15858811
Alignment:
Q  268 ttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15858880 ttttaggctataaataggcttccatcttcaacaaataccttcattcttcacatcacctcttttcttacat 15858811  T

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Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 2606076 - 2606129
Alignment:
Q  280 aataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2606076 aataggcttccatcttcaacaaataccttcattcttcacttcacatcttttctt 2606129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 23252545 - 23252469
Alignment:
Q  259 taggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||||||||||| |||||||||  ||| |||||| ||||||| |||||||||||||||| ||||||||||||||    
T  23252545 taggacttattttagactataaataaacttgcatcttaaacaaattccttcattcttcactttacctcttttcttac 23252469  T

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Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 27495261 - 27495154
Alignment:
Q  230 acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttt 329  Q
    |||||||||  |||| |||| | || ||||| ||||  ||| ||||||||||||| ||| |||||||||||| |  ||||||||||||||||||||||||    
T  27495261 acacgttttagttgactgtaattattacctatgactggtttaaggctataaatagactttcatcttcaacaattttcttcattcttcacttcacctcttt 27495162  T
Q  330 tcttacat 337  Q
    ||||||||    
T  27495161 tcttacat 27495154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 8300857 - 8300915
Alignment:
Q  279 aaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  8300857 aaatagacttccatcttcaacaaatacctacattcttcacttcacatcttttcttacat 8300915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 187
Target Start/End: Original strand, 9715144 - 9715286
Alignment:
Q  45 atgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggca 142  Q
    ||||||||||||| ||||||| |||||||||| | |  |||||||||||||||||  ||||||||| |||||||||||    || ||||||| |||| ||    
T  9715144 atgcattccggaaaataaaatccggaatgcacttttgatttccggaatatattttc-cggattaatacgataatggtgaacgacaagggaaa-gttgaca 9715241  T
Q  143 cttcatgtagggctaaggacattccggaatgtaaaatccggaaag 187  Q
    |||| ||||||| ||||||  |||||||||||| |||| ||||||    
T  9715242 cttcttgtagggttaaggaagttccggaatgtataatctggaaag 9715286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 27690499 - 27690578
Alignment:
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||| |||| |||||||||||| |||| |||||||||||| | | ||||||||||||||| | |||||||||||||    
T  27690499 ctaggactgatttaaggctataaatatgcttgcatcttcaacaatttcattcattcttcacttcccatcttttcttacat 27690578  T

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Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 32695099 - 32695025
Alignment:
Q  262 gacttattttaggctataaataggcttc-catcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||| ||| ||| |||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||    
T  32695099 gacttgtttaaggttataaataggctttgcatcttcaacaaattccttcatttttcacttcacctcttttcttac 32695025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 22911856 - 22911921
Alignment:
Q  272 aggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||| |||||| ||||||||||| ||||| ||||||||||||||  ||| |||||||||||||    
T  22911856 aggctatcaataggtttccatcttcatcaaattccttcattcttcaccacacttcttttcttacat 22911921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 27948694 - 27948585
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | |||| | | |||| |||| |||||||||| || ||   ||||||||||| | ||||||||||||||||||||||     
T  27948694 gaacacgttttatttgaatgtacttatgaacgatgactgatttaaggctataaaaagactcgaatcttcaacaatttccttcattcttcacttcacctcc 27948595  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  27948594 tttcttacat 27948585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 41616070 - 41616153
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||| || |||||||||||||| ||||||  ||||||||||  | |||||||| ||  ||||||||| ||||||||||    
T  41616070 aatgacctaggatttgttttaggctataaaaaggcttggatcttcaacattttccttcattatt--cttcacctcctttcttacat 41616153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 5343793 - 5343853
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  5343793 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 5343853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 8197675 - 8197647
Alignment:
Q  33 cggccatgactgatgcattccggaatata 61  Q
    |||||||||||||||||||||||||||||    
T  8197675 cggccatgactgatgcattccggaatata 8197647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 23344845 - 23344909
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttca 317  Q
    |||| ||||||||| ||||| | |||||| ||| ||  ||||||||||||| |||||||||||||    
T  23344845 atgatctaggacttgttttaagttataaaaaggtttgtatcttcaacaaattccttcattcttca 23344909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 32746923 - 32746863
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| |||||| ||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  32746923 acctatgacttactttaggctataaaaaggcttggatcttcaacattttccttcattcttc 32746863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 46255166 - 46254858
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||   ||||    
T  46255166 caccgaccatgactgatgcattccggaatataaaattcggaatgcacatctgttttccggaatatattttc-cggattaatgcgataatggtg---aacg 46255071  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||       
T  46255070 agagaaaagttgacacttcatgtagggctaagggcgttccggaatgtaaaatccagaaagattcagagccattaatgtgggtttggacggttacaacaac 46254971  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46254970 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 46254871  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  46254870 tcttttcttacat 46254858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 25528946 - 25529247
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||| |||||  |||||| |||||||||||||   |||||    
T  25528946 caccggccatgactgatgcattccggaatataaaatctagaatgcacatctgttttccggaatacattttc-cggattcatgcgataatggt---gaacg 25529041  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||    
T  25529042 agggaaaagttggcacttcctgtagggctaaggacattccagaatgtaaaatccagaaagattcagagtcattaatgtgggtttggacggttacaaccac 25529141  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
      |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25529142 tgacacgtattcattgattgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 25529241  T
Q  328 tttctt 333  Q
    ||||||    
T  25529242 tttctt 25529247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 78 - 337
Target Start/End: Original strand, 34847759 - 34848020
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34847759 tgtttttcggaatatattttc-cggattaatgcgataatggtggtgaacgagggaaaagttggcacttcctatagggctaaggacattccggaatgtaaa 34847857  T
Q  178 atccggaaagattcagagccattaatgtgagttttgacggtt---acaaccacgaacacgttttcattgattgtattaatgacctaggacttattttagg 274  Q
    ||||||||||||||||||||||||||||| |||| ||| |||   |||||||| |||||||||||||||| ||||||||||||||||||||| ||||| |    
T  34847858 atccggaaagattcagagccattaatgtgggtttggacagttacaacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttatg 34847957  T
Q  275 ctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34847958 ctataaataggcttccatcttcaacagataccttcattcttcacttcacctcttttcttacat 34848020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 43458483 - 43458183
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||||  |||||||||||| |||||||| |||  |||||| | ||||||||||  |||||||||||||||||||||   ||||    
T  43458483 caccgaccatgactgatgcattatggaatataaaatccggaatgctcatctgttttctgaaatatattttg-cggattaatgcgataatggtg---aacg 43458388  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  43458387 agggaaaagttggcacttcatgtagggctaaggacattcaagaatgtaaaattcggaaagattcagagccattaatgtgggtttggacggttacaaccac 43458288  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  43458287 taacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggc-tacatcttcaacaaataccttcattcttcacttcacctct 43458189  T
Q  328 tttctt 333  Q
    ||||||    
T  43458188 tttctt 43458183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 33951234 - 33950923
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| ||||||||||||||||||||||||| |||  |||| ||||||  |||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  33951234 caccggtcatgactgatgcattccggaatatataatctggaaagcacatctgttttctggaatatattttt-cggattaatgagataatggtggtgaacg 33951136  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    || |||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || ||||   |||||    
T  33951135 agagaaaagttggcacttcctatagggctaaggacattccggaatgtaaaatccggaacgattcagagccattaatgtgggtttggatggttacaacaac 33951036  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||||| ||||||||||| |||    
T  33951035 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataagtttctatcttcaacaaatacctttattcttcactttacc 33950936  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  33950935 tcttttcttacat 33950923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 14816493 - 14816794
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| |||||||||| |||| |||||||||||||  || |  |||||  ||||| |||||||| ||||| ||||||||||||||||||||   |||||    
T  14816493 caccggtcatgactgatacatttcggaatataaaatctggtaaacacatttgtttttcggaatatgttttt-cggattaatgcgataatggt---gaacg 14816588  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||    
T  14816589 agggaaaagttgacactttctgtagggctaaggacattccggaatgtaaaatccagaaagatccagagccattaatgtgggtttggacggttacaaccac 14816688  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14816689 taacacgttttcattgactgtattaatgacctaggacttgttttagcctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 14816788  T
Q  328 tttctt 333  Q
    ||||||    
T  14816789 tttctt 14816794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 15263489 - 15263790
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| |||||||||| |||| |||||||||||||  || |  |||||  ||||| |||||||| ||||| ||||||||||||||||||||   |||||    
T  15263489 caccggtcatgactgatacatttcggaatataaaatctggtaaacacatttgtttttcggaatatgttttt-cggattaatgcgataatggt---gaacg 15263584  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||    
T  15263585 agggaaaagttgacactttctgtagggctaaggacattccggaatgtaaaatccagaaagatccagagccattaatgtgggtttggacggttacaaccac 15263684  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15263685 taacacgttttcattgactgtattaatgacctaggacttgttttagcctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 15263784  T
Q  328 tttctt 333  Q
    ||||||    
T  15263785 tttctt 15263790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 35794761 - 35794471
Alignment:
Q  34 ggccatgactgatgcattccggaatataaaattcggaatgcacatgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaa 133  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | ||             || ||||||||||||||||||||||||||||||||||    
T  35794761 ggccatgactgatgcattccggaatataaaatccggaatgcacatatgtt-------------ttccggattaatgcgataatggtggtgaacgagggaa 35794675  T
Q  134 aagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacac 233  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||  ||| ||||||||||||||| |||||    
T  35794674 aagttggcacttcttgtaaggctaaggacatttcggaatgtaaaatccggaaagatttagagccattaatatggatttggacggttacaaccactaacac 35794575  T
Q  234 gttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  35794574 gttttcattgactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacatcagctcttttctt 35794475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 33 - 337
Target Start/End: Original strand, 36311922 - 36312226
Alignment:
Q  33 cggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagg 130  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||   |||||||     
T  36311922 cggctatgactgatgcatttcggaatataaaatccggaatgcacatctgttttccggaatatattttt-cggattaatgcgataatggt---gaacgaga 36312017  T
Q  131 gaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaaccac 227  Q
    ||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||   ||||||||    
T  36312018 gaaaagttgacacttcctgtagggctaagggcgttccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacggttacaacaaccac 36312117  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||| ||||| |||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  36312118 taacacgtttttattgactgtattaatgacctagaacttgttttaggctat-aatagacttccatcttcaacaaatatcttcattgttcacttcacctct 36312216  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  36312217 tttcttacat 36312226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 44866350 - 44866155
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||||| ||||| |||||| |||||||||||  ||||||| ||||||||||||  | ||||||||||||||||||||||||||    
T  44866350 caccgaccatgactgatgcattctggaatttaaaatccggaatgcacacctgttttctggaatatattttc-cagattaatgcgataatggtggtgaacg 44866252  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac 224  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||||||    
T  44866251 agggaaaaattggcacttcctgtagggctaaggacattccggaatgtaaactccggaaagattcagagccattattgtgggtttggacggttacaac 44866155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 1377456 - 1377355
Alignment:
Q  223 accacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttca 322  Q
    ||||| |||||||||||||||| |||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  1377456 accacaaacacgttttcattgactgtacttatgacatatgacttattttaggctataaataggcttccatcttcaacaaatttcttcattcttcacttca 1377357  T
Q  323 cc 324  Q
    ||    
T  1377356 cc 1377355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 42321185 - 42321286
Alignment:
Q  245 ttgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacatattattc 344  Q
    |||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| || |||    
T  42321185 ttgtattaataacctatgacttgttttaggttataaataggcttccatcttcaacaaatatcttcattcttcacttcacctcttttcttccattttcttc 42321284  T
Q  345 ga 346  Q
    ||    
T  42321285 ga 42321286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 1852250 - 1852142
Alignment:
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    ||||||||||||||||||||| | ||||||||||  || |||||||||||| ||| |||| |||||| ||||||  ||||||||||||||||||||||||    
T  1852250 aacacgttttcattgattgtacttatgacctaggtattgttttaggctatatataagcttgcatcttgaacaaagtccttcattcttcacttcacctctt 1852151  T
Q  329 ttcttacat 337  Q
    |||||||||    
T  1852150 ttcttacat 1852142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 44863088 - 44863013
Alignment:
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||| ||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  44863088 ctaggacttgttttaagctataaatatgcttcaatcttgaacaaataccttcattcttcacttcacctcttttctt 44863013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 26188220 - 26188304
Alignment:
Q  241 ttgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacct 325  Q
    ||||||||| | |||||||||||| | ||||||| ||||||||||| | ||| |||||||||| |||||||||||||||||||||    
T  26188220 ttgattgtacttatgacctaggacatgttttaggttataaataggcatgcatgttcaacaaattccttcattcttcacttcacct 26188304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 31326687 - 31326763
Alignment:
Q  259 taggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||||| |||||  ||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  31326687 taggacttgttttatactataaataggtttgcatcttcaacaaatttcttcattcttcacttcacctcttttcttac 31326763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 19647047 - 19646938
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | |||| ||||||||  ||| || ||||||||| ||||  ||||||||||| | ||||||||||| |||||||||||    
T  19647047 gaacacgttttacttgactgtaattatgatctaggactggtttaagactataaatatgcttgaatcttcaacaatttccttcattctttacttcacctct 19646948  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  19646947 tttcttacat 19646938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 3601048 - 3601115
Alignment:
Q  268 ttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||||||||||||| ||| ||||||||||||||  |||| |||||||||||| ||||||||||||    
T  3601048 ttttaggctataaatagacttgcatcttcaacaaatttcttcgttcttcacttcaactcttttcttac 3601115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 1906594 - 1906671
Alignment:
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||| | ||| || ||||||||||||||  ||||||||||| | ||| |||||||||||||||||||||||||||    
T  1906594 ctaggacatgtttaagactataaataggcttgaatcttcaacaagttcctgcattcttcacttcacctcttttcttac 1906671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 10907068 - 10907022
Alignment:
Q  291 atcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||    
T  10907068 atcttcaacaatttccttcattcttcacttcacctcctttcttacat 10907022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 24687543 - 24687646
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  || |||||| | | |||||| ||||||||| |||||||||| ||||||  ||||||||||  | |||||||||||  |||||||||     
T  24687543 gaacacgttttatttaattgtaattaagacctatgacttatttaaggctataaaaaggcttagatcttcaacattttccttcattctt--cttcacctcc 24687640  T
Q  328 tttctt 333  Q
    ||||||    
T  24687641 tttctt 24687646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 34847661 - 34847730
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatatttt 97  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  ||||  |||||| |||||||||||||    
T  34847661 caccggccatgactgatgcattccagaatatataatccggaaaacacatctgtttttcggaatatatttt 34847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 7255443 - 7255503
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  7255443 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 7255503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 26792076 - 26792016
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  26792076 acctatgacttgttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 26792016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 17309260 - 17308950
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  17309260 caccggccatgactgatgcattccggaatatataatccggaaagcacatctggtttccggaatatattttt-cggattaatgcgataatggtggtgaacg 17309162  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtta---caac 224  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||   ||||    
T  17309161 agggaaaagttagcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacggttacaacaac 17309062  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17309061 cactaacacgttttcattgactgtattaatgacctatgacttgttttcggctataaataggcttccatcttc-acaaataccttcattcttcacttcacc 17308963  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  17308962 tcttttcttacat 17308950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 38703421 - 38703731
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| |||||||||||||||||||||||||| |||  |||| ||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  38703421 caccgcccatgactgatgcattccggaatatataatctggaaagcacatatgttttccggaatatattttct-ggattaatgcgataatggtggtgaacg 38703519  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||   |||||    
T  38703520 agggaaaagttggcacttcctataaggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaatgtgggtttggacggttacaacaac 38703619  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38703620 cactaacacgttttcattgactgtattaatgacctaggacttcttttaggctataaat-ggcttccatcttcaacaaatacctttattcttcacttcacc 38703718  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  38703719 tcttttcttacat 38703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 6404415 - 6404108
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||  |||||| ||||||| |||   |||||||||||||||||| ||||||||     
T  6404415 caccggccatgactgatgcattctggaatatacaatccggaatgcacatctgttttctggaatatgtttac-cggattaatgcgataatgatggtgaaca 6404317  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || ||||||||| |||||| ||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  6404316 agagaaaagttg-cacttcctgtagggttaaggacattccggaatataaaatcgggaaagatttagagccattaatgcgggtttggacggttacaaccac 6404218  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     ||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6404217 taacacgttttcgttgaccgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacatcacctct 6404118  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  6404117 tttcttacat 6404108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 30490515 - 30490825
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||||| |||||| |||  |||| ||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  30490515 caccggccatgactgatgcattccgaaatatataatctggaaagcacatctgttttccggaatatattttc-cggattaatgcgataatggtggtgaacg 30490613  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
     | |||| |||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||       
T  30490614 tgtgaaa-gttgacacttcctatagggctaaggacattccggaatgtaaaatccagaaagattcagagccattaatgtgggtttggacggttacaacaac 30490712  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||| ||| |    
T  30490713 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggccataaataggctttcatcttcaacaaatacctacattcttcacctcagc 30490812  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  30490813 tcttttcttacat 30490825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 110 - 337
Target Start/End: Complemental strand, 15911998 - 15911768
Alignment:
Q  110 cgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagt 209  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15911998 cgataatggtggtgaacgagggaaaagttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggt 15911899  T
Q  210 tttgacggtta---caaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
    || ||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15911898 ttggacggttacaacaaccactaacacattttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacc 15911799  T
Q  307 ttcattcttcacttcacctcttttcttacat 337  Q
    || ||||||||||||||||||||||||||||    
T  15911798 ttgattcttcacttcacctcttttcttacat 15911768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 97 - 337
Target Start/End: Complemental strand, 44760325 - 44760085
Alignment:
Q  97 tttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagc 196  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  44760325 tttcggattaatgcgataatggtggtgaacgaggaaaaggttggcacttcctgtagggctaaggacattccgaaatataaaatccggaaagattcagagc 44760226  T
Q  197 cattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttc 296  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  44760225 cattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataagcttccatcttc 44760126  T
Q  297 aacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    || | ||||||||||| ||||| ||||||||||||||||||    
T  44760125 aagatataccttcattattcacatcacctcttttcttacat 44760085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 17137540 - 17137850
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||  |||||||| |||||||||||| ||  ||| |||||||||||||| |||||    
T  17137540 caccggccatgactgatgcattctggaatataaaatccgaaatgcacacctgttttccagaatatattttt-cgatttattgcgataatggtgg-gaacg 17137637  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||||| |||| |||||||   |||||    
T  17137638 agagaaaagttggcacttcctgtagagctaaggacattccggaatgtaaactccggaaacatttagagccattaatgtgggtttggacggttacaacaac 17137737  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaat----aggcttccatcttcaacaaataccttcattcttcactt 320  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    ||||||| ||||||||||||||||||||||||||||||    
T  17137738 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataaacaggcttctatcttcaacaaataccttcattcttcactt 17137837  T
Q  321 cacctcttttctt 333  Q
    |||||||||||||    
T  17137838 cacctcttttctt 17137850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 13279012 - 13278690
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||| ||||| ||||||||||| |||   | ||    
T  13279012 caccggccttgactgatgcattccggaatataaaatccggaatgcacatgtgttttccggaatttattttt-cggatgaatgcgataattgtg---agcg 13278917  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtg 206  Q
    ||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||                     ||||||||||||||    
T  13278916 agggaaaagttggcacttcttgtagggctaaggacactccggattgtaaaatctggaaagattcaacattggattcttttgaaagagagccattaatgtg 13278817  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     | || ||||||||||||||| |||||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  13278816 gggttggacggttacaaccactaacacgttttcattgactgtattaatgacaaaggacttgttttaggctataaataggcttccatcttcaacaaatacc 13278717  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  13278716 ttcattcttcacttcacctcttttctt 13278690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 45117375 - 45117067
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||| ||||||||||| | ||||||||| | |||||| ||||  |||||||||||||||  |||| |  |||||||| ||||   |||||||||    
T  45117375 caccggccataactgatgcatttcagaatataaactccggaatacacatctgttttccggaatat-gttttccaaattaatgcaataa---tggtgaacg 45117280  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||||||||||| | |||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||  ||| |||||||||||||||    
T  45117279 agggaaaagttggcacttcctttagggctaaggacattcaagaatgtaaaatccagaaagattcagagccgttaatgtggatttggacggttacaaccac 45117180  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaatagg-------cttccatcttcaacaaataccttcattcttcactt 320  Q
     |||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||       |||||||||||||||||||| ||||||||||||||    
T  45117179 taacacgttttcattgactctattaatgacctaagacttgttttaggctataaataggcttccatcttccatcttcaacaaatactttcattcttcactt 45117080  T
Q  321 cacctcttttctt 333  Q
    |||||||||||||    
T  45117079 cacctcttttctt 45117067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 1209750 - 1210072
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt-tttccggaatatattttttcggattaatgcgataatggtggtgaacga 128  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||||   ||||||    
T  1209750 caccggccttgactgatgcattccggaatataaaatccggaatgcacatctgtttccggaatatattttt-cggattaatgcgataatggt---gaacga 1209845  T
Q  129 gggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattc---------------------agagccatt-aatgtg 206  Q
    ||||||||||||| |||| || |||||||||||| |||||||||||||||||| ||||| |||                     ||||||||| ||||||    
T  1209846 gggaaaagttggcccttcttggagggctaaggacgttccggaatgtaaaatccagaaagcttcaacattggattcttttgaaagagagccattaaatgtg 1209945  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  1209946 ggtttggacggttacaaccactaacacgttttcattgactttattaatgacctaggacttgttttaagctataaataggcttccatcttcgacaaatacc 1210045  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    | ||||||||||||||| |||||||||    
T  1210046 tgcattcttcacttcacatcttttctt 1210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 244
Target Start/End: Complemental strand, 38208632 - 38208417
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||  ||||| |||||||||||||  ||||||||||| |||||||||   ||||    
T  38208632 caccggccatgactgatgcattccgaaatataaaatccggaatgcacatctgtttttcggaatatattttc-cggattaatgcaataatggtg---aacg 38208537  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    || ||||||||| |||||| | ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||   |||||    
T  38208536 agagaaaagttgacacttcctatagggctaagggcgttccggaatgtaaaatctggaaagattcagagccattaatgtgggtttggacggttgcaacaac 38208437  T
Q  225 cacgaacacgttttcattga 244  Q
    ||| ||||||||||||||||    
T  38208436 cactaacacgttttcattga 38208417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 31993894 - 31994218
Alignment:
Q  30 caccggccatg--actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaa 125  Q
    |||||||||||  ||||||| ||||||||| ||||||| ||||||| || |  || ||||||||||||||||  ||||||||| | |||||||||   ||    
T  31993894 caccggccatgccactgatgtattccggaaaataaaatccggaatgtacctttgtgttccggaatatattttc-cggattaatacaataatggtg---aa 31993989  T
Q  126 cgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatg 204  Q
    | |||||||||||| |||||| |||||||| |||||  |||||||||||| |||| |||||| |||||                     |||||||||||    
T  31993990 caagggaaaagttgacacttcttgtagggccaaggaagttccggaatgtataatctggaaagcttcagcattggattcttttgaaagagagccattaatg 31994089  T
Q  205 tgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaata 304  Q
    |  |||| ||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  31994090 taggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaataggtttccatattcaacaaata 31994189  T
Q  305 ccttcattcttcacttcacctcttttctt 333  Q
     |||||||| |||||||||||||||||||    
T  31994190 tcttcattcatcacttcacctcttttctt 31994218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 18137722 - 18137585
Alignment:
Q  196 ccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatctt 295  Q
    ||||||||||  |||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||    
T  18137722 ccattaatgtaggttgggacggttacaaccactaacacgttttcattgattgtactaatgacctaggacttattttaggctataaataggcttttatctt 18137623  T
Q  296 caacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||| || |||||||    
T  18137622 caacaaataccttcattcttcacttcatcttttttctt 18137585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 7942742 - 7942883
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    ||||||||||||||  |||| ||||||||||||||| |||| ||||||||||| |||| ||| |||||||||||| ||||| |||||||| || ||||||    
T  7942742 agagccattaatgtaggtttggacggttacaaccactaacatgttttcattgactgtagtaaggacctaggacttgttttatgctataaacagacttcca 7942841  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  7942842 tcttcaacaaataccttcattgttcacttcacctcttttctt 7942883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 247 - 337
Target Start/End: Complemental strand, 38207567 - 38207477
Alignment:
Q  247 gtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38207567 gtattaatgacctaggacttgttttaggctataaatatgcttacatcttcaacaaataccttcattcttcacttcacctcttttcttacat 38207477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 337
Target Start/End: Original strand, 21485295 - 21485403
Alignment:
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    |||||||||| |||||||||| | |||||||||||||| |||||||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||||    
T  21485295 aacacgtttttattgattgtacttatgacctaggacttgttttaggctataaataagctttcatattcaacaaattctttcattcttcacttcacctctt 21485394  T
Q  329 ttcttacat 337  Q
    |||||||||    
T  21485395 ttcttacat 21485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 1114805 - 1114722
Alignment:
Q  232 acgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattctt 315  Q
    ||||||||||||| | || |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  1114805 acgttttcattgactatactaatgacctaggacttgttttaagctataaataggctttcatcttcaacaaataccttcattctt 1114722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 33946004 - 33945922
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||| ||||||||| |||||||||||| ||||| || |||||||||||||| |||||||||||||||||||| ||||||||||    
T  33946004 atgatctaggacttgttttaggctatatataggtttgcatcttcaacaaattccttcattcttcacttcaccacttttcttac 33945922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 21649746 - 21649822
Alignment:
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctta 334  Q
    ||||||||| ||| ||||||||||||| |||||||||||| |||||  |||||||||||||||||||| ||||||||    
T  21649746 ctaggacttgtttaaggctataaatagtcttccatcttcatcaaatttcttcattcttcacttcaccttttttctta 21649822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 1115419 - 1115257
Alignment:
Q  30 caccggccatgac--tgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaa 125  Q
    |||||||||||||  ||||||||||||||| |||||||  ||||||||| |  ||||||| |||||||||||  || |||||| |||||||||||   ||    
T  1115419 caccggccatgacactgatgcattccggaaaataaaatctggaatgcacctttgttttccagaatatattttc-cgaattaatacgataatggtg---aa 1115324  T
Q  126 cgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca 192  Q
    |||| ||||||||| |||||| ||||||| |||||||  |||  |||||| ||||| ||||| ||||    
T  1115323 cgagagaaaagttgacacttcttgtagggttaaggacgctccataatgtataatccagaaagcttca 1115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 7942573 - 7942691
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagtt 138  Q
    ||||||||||||||||| ||||||| ||||||| || |  || ||||||||||||||||  |||| |||| ||||||||||   |||||||| |||||||    
T  7942573 actgatgcattccggaaaataaaatccggaatgtacctttgtgttccggaatatattttc-cggactaatacgataatggt---gaacgaggaaaaagtt 7942668  T
Q  139 ggcacttcatgtagggctaagga 161  Q
    |||||||| |||| |||||||||    
T  7942669 ggcacttcttgtatggctaagga 7942691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 18963454 - 18963345
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| |  ||||||| || | |||| |||||||||| ||||||  ||||||||||| | ||||||||||||||||||||||     
T  18963454 gaacacgttttatttgactgtacttgtgacctatgattgatttaaggctataaaaaggcttggatcttcaacaatttccttcattcttcacttcacctcc 18963355  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  18963354 tttcttacat 18963345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 37127959 - 37128035
Alignment:
Q  259 taggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||||| |||||||||||||||| |||| ||| || ||||||| | ||||||||||||||||||| |||||||||    
T  37127959 taggacttgttttaggctataaataagcttgcatttttaacaaattctttcattcttcacttcacctattttcttac 37128035  T

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Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 15257142 - 15257251
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | |||||||| |||| |||| |||||||||| || |||  |||||||| || |  |||||||||||||||||||||     
T  15257142 gaacacgttttatttgactgtacttatgacctatgactgatttaaggctataaaaagacttggatcttcaataattttcttcattcttcacttcacctcc 15257241  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  15257242 tttcttacat 15257251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 16739457 - 16739539
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||| |||||||||||||| ||||||  ||||||||||  | |||| |||||||   ||||||||||||||||||    
T  16739457 aatgacctaggacttgttttaggctataaaaaggcttggatcttcaacattttcctttattcttc---tcacctcttttcttacat 16739539  T

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Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 45234534 - 45234447
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataat 116  Q
    |||| ||||||| ||||||||||||||||||| ||| ||||| |||||  |||||||| |||| |||||| | ||||||||||||||||    
T  45234534 caccagccatgattgatgcattccggaatatataatccggaaagcacatttgttttccagaatttattttct-ggattaatgcgataat 45234447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 337
Target Start/End: Complemental strand, 34906421 - 34906338
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||| || ||||||||||| |||| |  ||||||||||  | |||||||||||  ||||||||| ||||||||||    
T  34906421 aatgacctaggacttgttctaggctataaaaaggcatgaatcttcaacattttccttcattctt--cttcacctcctttcttacat 34906338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 337
Target Start/End: Complemental strand, 34948568 - 34948485
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||| ||||| |||||||||||||| ||||||  ||||| ||||  | |||||||||||  ||||||||| ||||||||||    
T  34948568 aatgacctatgacttgttttaggctataaaaaggcttgaatctttaacattttccttcattctt--cttcacctcctttcttacat 34948485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 24168594 - 24168513
Alignment:
Q  252 aatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||| || |||| ||||||||||||||||| ||| ||| |||| ||||| |||| | ||||||||| | ||||||||||    
T  24168594 aatgaccaagcacttgttttaggctataaatagacttgcatgttcaccaaattcctttactcttcacttaagctcttttctt 24168513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 16252427 - 16252494
Alignment:
Q  267 attttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctta 334  Q
    |||| |||||||||| ||||||  ||||||||||| | |||||||||| |||||||| || |||||||    
T  16252427 atttaaggctataaaaaggcttggatcttcaacaatttccttcattctgcacttcacatcctttctta 16252494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 39318432 - 39318736
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||  |||||||| ||| ||||||| ||||||||||||||||||||||||||||     
T  39318432 caccggccatgactgatgcattccggaatataaaatccggaatgcccacctgttttccagaaaatatttt-tcggattaatgcgataatggtggtgaaca 39318530  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  39318531 agagaaaagttggcacttactgtagggctaaggacattctggaatgtaaactccggaaagattcagagccattattgtgggtttggacggttacaaccac 39318630  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39318631 taacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaacaaataccttcattattcacttcacctct 39318730  T
Q  328 tttctt 333  Q
    ||||||    
T  39318731 tttctt 39318736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 11076529 - 11076225
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  11076529 caccggccatgactgatgcattccggaatataaaatccgaaatgcacacctgtgttccggaatatattttt-cggattaatgcgataatggtggtgaacg 11076431  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||| |||| |||||||||||||||    
T  11076430 agagaaaagttggcacttcctgtagggctaaggacattccggaatgtaaacttcggaaagattcagagtcattattgtgggtttggacggttacaaccac 11076331  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  11076330 taacacgtttttattgactgtattaatgacctaggacttgttttagactataaatagacttccattttcaacaaataccttaattcttcacttcacctct 11076231  T
Q  328 tttctt 333  Q
    ||||||    
T  11076230 tttctt 11076225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 40105086 - 40105390
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||  |||||||||||  ||||| ||||||||||||||||||||||    
T  40105086 caccgaccatgactgatgcattccggaatataaaatccggaatgcacacctgttttctagaatatattttc-cggatcaatgcgataatggtggtgaacg 40105184  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| |||| ||||||| |||||||    
T  40105185 agagaaaagttggcacttcctgtagggctaaggacattccggaatgtaaactccggaaagattcagagtcattattgtgggtttggacggttgcaaccac 40105284  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40105285 taacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcaattcacctct 40105384  T
Q  328 tttctt 333  Q
    ||||||    
T  40105385 tttctt 40105390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 8239825 - 8240128
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| |||||||||||||||||  |||||||||| |||||||||||  | ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8239825 caccgggcatgactgatgcattccaaaatataaaatccggaatgcacacctattttccggaatatattttc-cggattaatgcgataatggtggtgaacg 8239923  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || ||||  |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  8239924 agagaaac-ttggcacttcctgtagggctaaggacattccgaaatgtaaactccggaaagattcagagccattattgtgggtttggacggttacaaccac 8240022  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||| | ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8240023 taacacgttttcattaactgtattaataacataggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcaccttt 8240122  T
Q  328 tttctt 333  Q
    ||||||    
T  8240123 tttctt 8240128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 35683852 - 35684156
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||  || |||  ||||||||||||  |||||||||||||||||| ||| |||||    
T  35683852 caccgcccatgactgatgcatcccggaatataaaatccggaatgcacacctgctttatggaatatattttc-cggattaatgcgataatgatggcgaacg 35683950  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || ||||||||||||| || ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  35683951 agagaaaagttggcacatcctgtagggctaatgacattccggaatttaaactccggaaagattcagagccattattgtgggtttggacggttacaaccac 35684050  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||| ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  35684051 taacacgttttcattgactgttttaatgacccagtacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcaccaat 35684150  T
Q  328 tttctt 333  Q
    ||||||    
T  35684151 tttctt 35684156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 39260129 - 39260437
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||| ||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||  ||||||||||| |||||||||   || |    
T  39260129 caccagccatgactaatgcattccggaatataaaatccgggatgcacatctgttttccggaatatattttc-cggattaatgcaataatggtg---aatg 39260224  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    || ||||||||| |||||| ||||| ||||||| | |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||    
T  39260225 agagaaaagttgacacttcctgtagagctaagggcgttccggaatgtaaaatccggaaagattcagagtcattaatgtgggtttggacggttacaacaac 39260324  T
Q  228 ga---acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
     |   ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  39260325 cattaacacgtttttattgactgtattaatgacctaggacttgttttaggctataaataggcttctatcttcaacaaatacattcattcttcacttcacc 39260424  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  39260425 tcttttcttacat 39260437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 30 - 323
Target Start/End: Complemental strand, 20092179 - 20091867
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||  |||||||| ||||||||||  ||||||||||||||||||||    ||||    
T  20092179 caccggccatgactgatgcattccggaatataaaatccgaaacgcacatctgttttccgaaatatattttc-cggattaatgcgataatggta---aacg 20092084  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattc---------------------agagccattaatgtg 206  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||                     ||||||||||||||     
T  20092083 agggaaaagttggcacttcctgtagggctaaggacattctggaatgtaaaatccggaaagcttcaacatttgattcttttgaaagagagccattaatgtc 20091984  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||| ||||||||||| ||||||||||||||||  ||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  20091983 ggtttggacagttacaaccactaacacgttttcattgaccgtagtaatgacataggacttgttttaggctatatataggcttccatcttcaacaaatacc 20091884  T
Q  307 ttcattcttcacttcac 323  Q
    |||||||||||||||||    
T  20091883 ttcattcttcacttcac 20091867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 78 - 333
Target Start/End: Complemental strand, 37098602 - 37098330
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    ||||||||| ||||||||||  |||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37098602 tgttttccgaaatatattttc-cggattaatgcgataatggtg---aacgagggaaaagttggcacttcctgtagggctaaggacattccggaatgtaaa 37098507  T
Q  178 atccggaaagattca---------------------gagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatga 256  Q
    || ||||||| ||||                     |||||||||||||| |||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  37098506 atacggaaagcttcaacattggattcttttgaaagagagccattaatgtgggtttagacggttacaaccactaacacgtttttattgactgtattaatga 37098407  T
Q  257 cctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    | | |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37098406 catgggacttgttttaggctataaataagctttcatcttcaacaaataccttcattcttcacttcacctcttttctt 37098330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 224
Target Start/End: Original strand, 42131737 - 42131932
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| |||||||||||||||||| |||||||| ||| ||||| ||||||  ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42131737 caccagccatgactgatgcattctggaatatataatccggaaagcacatctgttttccagaatatatttt-tcggattaatgcgataatggtggtgaacg 42131835  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac 224  Q
    |  |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  42131836 acagaaaagttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatatgggtttggacggttacaac 42131932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 43098364 - 43098686
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||| ||  |||||||||||  ||||||||||||||||||||    ||||    
T  43098364 caccggccatgactgatgcattccggaagataaaatccggaaagcacatatgttgtctagaatatattttc-cggattaatgcgataatggta---aacg 43098459  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaa------------gattc---------agagccattaatgtg 206  Q
    |||||||||||| |||||| ||||||| ||||||| || ||| ||||||||| |||| |            |||||         |||||||||||||||    
T  43098460 agggaaaagttgacacttcttgtagggttaaggacgtttcgggatgtaaaatacggataacttgaacagtggattcttttgaaagagagccattaatgtg 43098559  T
Q  207 agttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacc 306  Q
     |||| ||||||||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  43098560 ggtttggacggttacaaccactaacacgttttcattgactataataatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataca 43098659  T
Q  307 ttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||    
T  43098660 ttcattcttcacttcacctcttttctt 43098686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 41 - 333
Target Start/End: Complemental strand, 32338118 - 32337807
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagtt 138  Q
    ||||||||||||| ||| ||||||| |||||||||| |  |||||||||||||||||||  ||||||||| |||||||||||   ||||||| ||| |||    
T  32338118 actgatgcattccagaaaataaaatccggaatgcacctttgttttccggaatatattttc-cggattaatacgataatggtg---aacgaggaaaaggtt 32338023  T
Q  139 ggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag---------------------agccattaatgtgagttttgacgg 217  Q
    | |||||| ||||||| ||||||  | |||||||||| ||||||||||| |||||                     |||||| |||||  |||| |||||    
T  32338022 gacacttcttgtagggttaaggatgtaccggaatgtataatccggaaagcttcagcattggattcttttgaatgagagccatcaatgtaggtttggacgg 32337923  T
Q  218 ttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttca 317  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32337922 ttacaatcactaacacgttttcattgattgtactaatgacctaggacttggtttaggctataaataggcttccatcttcaacaaataccttcattcttca 32337823  T
Q  318 cttcacctcttttctt 333  Q
    ||||||||||||||||    
T  32337822 cttcacctcttttctt 32337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 78 - 333
Target Start/End: Complemental strand, 6347564 - 6347292
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    ||||||||||||||||||||  |||||||||||||||||||||   ||| ||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  6347564 tgttttccggaatatattttc-cggattaatgcgataatggtg---aacaagggaaaagttggcactttctgtagggctaaggttattccggaatgtaaa 6347469  T
Q  178 atccggaaagattcag---------------------agccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatga 256  Q
    |||  ||||| |||||                     ||||||||||||| |||| ||||||||||||||| |||||||||||||| | |||| ||||||    
T  6347468 atcttgaaagcttcagcattggattcttttgaaagagagccattaatgtgggtttggacggttacaaccactaacacgttttcatttactgtactaatga 6347369  T
Q  257 cctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6347368 cctaggacttgttttaggctataaacatgcttccatcttcaacaaataccttcattcttcatttcacctcttttctt 6347292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 31 - 333
Target Start/End: Original strand, 31700867 - 31701185
Alignment:
Q  31 accggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacga 128  Q
    |||||||||||||||| |||||   ||||||||||  |||| ||||||  | |||||||||| |||||| | ||||||||||||||||| ||   |||||    
T  31700867 accggccatgactgatacattcaacaatataaaatctggaacgcacatcagatttccggaatctattttct-ggattaatgcgataatgatg---aacga 31700962  T
Q  129 gggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtga 207  Q
    |||||||||||||| ||| ||||||||||||||||  | |||||||||||||||||||| ||||                     |||| |||||||||     
T  31700963 gggaaaagttggcatttcctgtagggctaaggacaccctggaatgtaaaatccggaaagcttcaacattgaattcttttgaaagagagctattaatgtgg 31701062  T
Q  208 gttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaatacct 307  Q
    ||||   |||||| |||||  |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31701063 gttt---cggttataaccaataacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaatacct 31701159  T
Q  308 tcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||    
T  31701160 tcattcttcacttcacctcttttctt 31701185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 32947180 - 32947072
Alignment:
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  32947180 aacacgttttcattgactgtattaatgacctaggacttgttttaggctataagtaggcttctatcttcaacaaataccttcattcttcacttcacctctt 32947081  T
Q  329 ttcttacat 337  Q
    |||||||||    
T  32947080 ttcttacat 32947072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 41 - 333
Target Start/End: Original strand, 586241 - 586552
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagtt 138  Q
    ||||||||||||||||| ||||||| ||||||| |  |  |||||| ||||||||||||  ||||||||| |||||||| ||   |||||||||||||||    
T  586241 actgatgcattccggaaaataaaatccggaatgtagctttgttttctggaatatattttc-cggattaatacgataatgatg---aacgagggaaaagtt 586336  T
Q  139 ggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattc---------------------agagccattaatgtgagttttgacgg 217  Q
    | |||||| ||||||| ||||||| |||||||||||| |||| |||||| |||                     |||||||| | |||   ||| |||||    
T  586337 gccacttcttgtagggttaaggacgttccggaatgtataatcaggaaagcttcaacattggattcttttgagagagagccatcagtgtagctttggacgg 586436  T
Q  218 ttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttca 317  Q
    |||||||||| |||| ||||||||||| |||| |||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  586437 ttacaaccactaacaagttttcattgactgtactaatgaactaagacttgttttaggctataaataggcttctatcttcaacaaataccttcattcttca 586536  T
Q  318 cttcacctcttttctt 333  Q
    || |||||||||||||    
T  586537 ctccacctcttttctt 586552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 41 - 333
Target Start/End: Complemental strand, 627682 - 627371
Alignment:
Q  41 actgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagtt 138  Q
    ||||||||||||||||| ||||||| ||||||| |  |  |||||| ||||||||||||  || |||||| |||||||| ||   |||||||||||||||    
T  627682 actgatgcattccggaaaataaaatccggaatgtagctttgttttcaggaatatattttc-cgaattaatacgataatgatg---aacgagggaaaagtt 627587  T
Q  139 ggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca---------------------gagccattaatgtgagttttgacgg 217  Q
    | |||||| ||||||| ||||||| |||||||||||| |||| |||||| ||||                     ||||||| |||||   ||| |||||    
T  627586 gacacttcttgtagggttaaggacgttccggaatgtataatcaggaaagcttcaacattggattcttttgagagagagccatcaatgtagctttggacgg 627487  T
Q  218 ttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttca 317  Q
    |||||||||| |||| ||||||||||| |||| |||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  627486 ttacaaccactaacaagttttcattgactgtactaatgaactaagacttgttttaggctataaataggcttctatcttcaacaaataccttcattcttca 627387  T
Q  318 cttcacctcttttctt 333  Q
    || |||||||||||||    
T  627386 ctccacctcttttctt 627371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 23144107 - 23144249
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaa-tgacctaggacttattttaggctataaataggcttcc 290  Q
    |||| |||||||||  |||| |||| |||||||||| |||| ||||||||||| |||| ||| ||||||||||||| ||||||| |||||||||||||||    
T  23144107 agagtcattaatgtaggtttggacgattacaaccactaacatgttttcattgactgtagtaaatgacctaggacttgttttaggttataaataggcttcc 23144206  T
Q  291 atcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23144207 atcttcaacaaataccttcattcttcacttcacctcttttctt 23144249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 13546078 - 13546239
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatg--ttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| ||   ||||||| ||||||||||  || |||||||||||||||||   |||||    
T  13546078 caccagccatgactaatgcattccggaatataaaatccggaatgcaaatcaattttccgaaatatattttc-cgaattaatgcgataatggt---gaacg 13546173  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag 193  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||| |||| |||||    
T  13546174 agggaaaagttggcacttcctgtagggttaaggacaatccggaatggaaaatccgaaaagcttcag 13546239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 13678395 - 13678234
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatg--ttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| ||   ||||||| ||||||||||  || ||||||||||||||||||   ||||    
T  13678395 caccagccatgactaatgcattccggaatataaaatccggaatgcaaatcaattttccgaaatatattttc-cgaattaatgcgataatggtg---aacg 13678300  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcag 193  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||| |||| |||||    
T  13678299 agggaaaagttggcacttcctgtagggttaaggacaatccggaatggaaaatccgaaaagcttcag 13678234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 32947321 - 32947197
Alignment:
Q  34 ggccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgaggg 131  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||| |||| ||||||||||||||||   ||||||||||| |    
T  32947321 ggccataactgatgcattccagaatataaaatccggaatgcacatctgttttccggaatata-ttttccggattaatgcgataa---tggtgaacgagag 32947226  T
Q  132 aaaagttggcacttcatgtagggctaagg 160  Q
    |||||||| |||||| |||||||||||||    
T  32947225 aaaagttgacacttcctgtagggctaagg 32947197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 28284527 - 28284449
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttc 331  Q
    |||| ||||||| | ||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  28284527 atgatctaggacatgttttaggctgtaaataggtttgcatcttcaacaaattccttcattcttcacttcacctcttttc 28284449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 23143940 - 23144081
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||| ||||  |||||||||| |||||||  | |  || ||||||||||||||||  ||||| ||| ||||||||||   |||||    
T  23143940 caccggccatgactgatgcgttccaaaatataaaatccggaatgtgcctttgtgttccggaatatattttc-cggataaatacgataatggt---gaacg 23144035  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatg 173  Q
    |||||||||||| |||||| |||||| |||||||  ||||||||||    
T  23144036 agggaaaagttgacacttcttgtaggcctaaggaagttccggaatg 23144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 11457093 - 11457017
Alignment:
Q  262 gacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacata 338  Q
    ||||| ||||||| |||||| |||||||||||||||||||||  |||| || ||||||| |||||||||||||||||    
T  11457093 gacttgttttaggttataaacaggcttccatcttcaacaaatttcttcctttttcacttaacctcttttcttacata 11457017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 42131968 - 42132013
Alignment:
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  42131968 tcttcaacaaataccttcattcttcacttcacctcttttcgtacat 42132013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 4258769 - 4258845
Alignment:
Q  261 ggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||| ||| |||||||||| ||| ||  ||||||||||| | || ||||||||||||||||||| ||||||||||    
T  4258769 ggacttgtttaaggctataaaaaggtttggatcttcaacaatttccgtcattcttcacttcacctcatttcttacat 4258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 21269089 - 21269138
Alignment:
Q  291 atcttcaacaaataccttcattcttcacttcacctcttttcttacatatt 340  Q
    ||||||||||| | |||||| |||||||||||||||||| ||||||||||    
T  21269089 atcttcaacaatttccttcactcttcacttcacctctttccttacatatt 21269138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 328
Target Start/End: Original strand, 42131940 - 42131971
Alignment:
Q  297 aacaaataccttcattcttcacttcacctctt 328  Q
    ||||||||||||||||||||||||||||||||    
T  42131940 aacaaataccttcattcttcacttcacctctt 42131971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 13546259 - 13546309
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcatt 242  Q
    ||||||||||||||| |||| ||||||||||||||| ||||  ||||||||    
T  13546259 agagccattaatgtgtgtttggacggttacaaccactaacagcttttcatt 13546309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 13678214 - 13678164
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcatt 242  Q
    ||||||||||||||| |||| ||||||||||||||| ||||  ||||||||    
T  13678214 agagccattaatgtgtgtttggacggttacaaccactaacagcttttcatt 13678164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 38225247 - 38225293
Alignment:
Q  298 acaaataccttcattcttcacttcacctcttttcttacatattattc 344  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||||    
T  38225247 acaaattccttcattcttcacttcatctcttttctttcattttattc 38225293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 32124533 - 32124590
Alignment:
Q  278 taaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||||||| |||| |||| |||| | ||||||||||||||| | |||||||||||    
T  32124533 taaataggcttgcatcgtcaaaaaattcattcattcttcacttcccatcttttcttac 32124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 23421002 - 23421062
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  23421002 acctatgactttttttaggctataaaaaggcttggatcttcaacattttccttcattcttc 23421062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 24830836 - 24830776
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  24830836 acctatgacttgttttaggctataaaaaggcttagatcttcaacattttccttcattcttc 24830776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 47647220 - 47646909
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||| |||||||||||||| |||||| ||| ||| |  ||||| |  ||| |||||||||||||  ||||||||||||||||||||||||||||    
T  47647220 caccggccataactgatgcattccgaaatatataatccggtaaacacatctatttttcggaatatattttc-cggattaatgcgataatggtggtgaacg 47647122  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    ||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||       
T  47647121 agggaaaagttggcacttcctataaggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacggttacaacaac 47647022  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47647021 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 47646922  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  47646921 tcttttcttacat 47646909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 149627 - 149323
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||||||||||||| |||| ||||||| || ||  |||||  |||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  149627 caccggccatgactgatgcattctggaacataaaatccgaaaaacacatatgttttccgaaatatattttc-cggattaatgcgataatggtggtgaacg 149529  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  149528 agggaaaagttggcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagtcattaacgtgggtttggacggttacaaccac 149429  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  149428 taacacgttttcattgactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaacaaatacttacattcttcacttcacctct 149329  T
Q  328 tttctt 333  Q
    ||||||    
T  149328 tttctt 149323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 10509055 - 10509366
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| ||||| ||||||||||| ||||||| ||| ||||| ||||||  ||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  10509055 caccggacatgaatgatgcattccagaatatataatccggaaagcacatctgttttcctgaatatattttc-cggattaatgcgataatggtgttgaacg 10509153  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    ||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||       
T  10509154 agggaaaggttgtcacttcctatagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacggttacaacaac 10509253  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10509254 cactaacacgttttcattgactgtattaatgacctaggacttcttttaggctataaataggcttctatcttcaacaaataccttcattcttcacttcacc 10509353  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  10509354 tcttttcttacat 10509366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 333
Target Start/End: Complemental strand, 40937512 - 40937214
Alignment:
Q  36 ccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaa 133  Q
    |||||||||||||||||||||||||||||| |||||| | |||  |||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  40937512 ccatgactgatgcattccggaatataaaatccggaattcgcatctgttttccggaatatattttc-cgaattaatgcgataatggtggtgaacgagggaa 40937414  T
Q  134 aagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacac 233  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||| ||||||||||||||| | |||||||| |||| ||||||||||||||| |||||    
T  40937413 aagttggcacttcctatagggctaaagacattccagaatgtaaaattcggaaagattcagagtctttaatgtgggtttggacggttacaaccactaacac 40937314  T
Q  234 gttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  40937313 gttttcattgactgtattaatgacctaggatttgttttaggctataaataggcttccatcttcaacaaatactttcatttttcacttcacctcttttctt 40937214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 36402547 - 36402855
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | | ||||||||||||||||||   || |    
T  36402547 caccggccatgactgatgcattccggaatataaaatccggaatgcacatctgttttccggaatatattttct-gaattaatgcgataatggtg---aatg 36402642  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    || ||||||||| ||||||  |||||| ||||| | ||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||       
T  36402643 agagaaaagttgacacttcccgtagggataagggcgttctggaatgtaaaatccggaaagattcagagtcattaatgtgggtttggacggttacaacaac 36402742  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36402743 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggttataaataggcttccatcttcaacaaataccttcattcttcacttcacc 36402842  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  36402843 tcttttcttacat 36402855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 344
Target Start/End: Complemental strand, 39586870 - 39586559
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||  ||||| |||||||||||||  | |||||||||||||||||||   ||||    
T  39586870 caccggccatgactgatgcattccagaat-taaaatccggaatgcacatctgtttttcggaatatattttc-ctgattaatgcgataatggtg---aacg 39586776  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  39586775 agggaaaagttagcacttcctgtaggactaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgggtttggatggttacaaccac 39586676  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||| ||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |    
T  39586675 taacacggtttcattgactgtattaatgacctaggatttgttttaagctataaataggcttccattttcaacaaatactttcattcttcaattcacctat 39586576  T
Q  328 tttcttacatattattc 344  Q
    |||||||||| ||||||    
T  39586575 tttcttacattttattc 39586559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 100 - 337
Target Start/End: Original strand, 47013623 - 47013860
Alignment:
Q  100 cggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccat 199  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47013623 cggattaatgcgataatggtagtgaacgagagaaaagttggcacttcctatagggctaaggacattccggaatgtaagatccgaaaagattcagagccat 47013722  T
Q  200 taatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaac 299  Q
    ||||||| |||| || |||||||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  47013723 taatgtgggtttggatggttacaaccactaacacgttttcattgaccgtattaatgacctaggacttgttttaggctataaataggtttccatcttcaac 47013822  T
Q  300 aaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47013823 aaataccttcattcttcacttcacctcttttcttacat 47013860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 26502026 - 26502332
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||| ||||||||||||||||||| ||  |||||  |||||  |||||||||||||||||||  |  ||||||||||||||||||||||| |    
T  26502026 caccggccatgattgatgcattccggaatatataacccggaaatcacatttgttttccggaatatattttg-caaattaatgcgataatggtggtgaatg 26502124  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    ||||||| |||| |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||       
T  26502125 agggaaa-gttgtcacttcctatagggctaaggacattctggaatgtaaaatccggaaagattcagagccattaatgtgggtttggacagttacaacaac 26502223  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26502224 cactaacacgttttcattgactgtattaatgacctaggacttgttttagactataaataggcttccatcttcaacaaatacctacattcttcacttcacc 26502323  T
Q  325 tcttttctt 333  Q
    |||||||||    
T  26502324 tcttttctt 26502332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 41182201 - 41182006
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| ||| | ||| ||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  41182201 caccggccatgactgatgcattccggaatatataatccagaaagcacatctgttttccggaatatattttt-cagattaatgcgataatggtggtgaacg 41182103  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac 224  Q
    ||||||||||||||||||| | ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||| || |||||||||    
T  41182102 agggaaaagttggcacttcctatagggctaaagacattccagaatgtaaagtccggaaagattcagagccattaatgtgggtttggatggttacaac 41182006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 32530052 - 32529796
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattc--- 191  Q
    |||| |||||||||||||||||||||   ||||||||||||||||||||||| |||| || ||||| | ||||||||||||||||||| |||  |||       
T  32530052 ttttccggattaatgcgataatggtg---aacgagggaaaagttggcacttcctgtatggttaagggctttccggaatgtaaaatccgaaaaacttcagc 32529956  T
Q  192 ------------------agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttag 273  Q
                      ||||||||||||||| |||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||    
T  32529955 attgggttcttttgaaagagagccattaatgtgggtttggacggttacaaccactaacacgttttcattaactgtattaatgacctaggacttgttttag 32529856  T
Q  274 gctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32529855 gctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 32529796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 189 - 333
Target Start/End: Complemental strand, 227770 - 227626
Alignment:
Q  189 ttcagagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggctt 288  Q
    |||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||    
T  227770 ttcagagccattgatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaatagactt 227671  T
Q  289 ccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  227670 ccatctttaacaaataccttcattcttcacttcacctcttttctt 227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 78 - 333
Target Start/End: Complemental strand, 6936735 - 6936464
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    ||||||||| || |||||||  |||||||||||||||| ||||   ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  6936735 tgttttccgaaacatattttc-cggattaatgcgataaaggtg---aacgagggaaaagttggtacttcttgtagggctaaggacgttccggaatgtaaa 6936640  T
Q  178 atccggaaagattca--------------------gagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgac 257  Q
    || ||||||| ||||                    ||||||||||| || |||| | ||||||||||||| |||||||||||||||| ||||||||||||    
T  6936639 attcggaaagcttcaacattgattcttttgaaagagagccattaatatgggtttgggcggttacaaccactaacacgttttcattgactgtattaatgac 6936540  T
Q  258 ctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
     |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6936539 ttaggacttgttttaggctataaataggcttccatcttcaacaaatacattcattcttcacttcaccttttttctt 6936464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 333
Target Start/End: Original strand, 49165944 - 49166250
Alignment:
Q  45 atgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggca 142  Q
    ||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||   |||||||||||||||||||    
T  49165944 atgcactccggaatataaaattcggaatgcacatctgttttccgaaatatattttc-cggattaatgcgataatggtg---aacgagggaaaagttggca 49166039  T
Q  143 cttcatgtagggctaaggacattccggaatgtaaaatccggaaag------------attc---------agagccattaatgtgagttttgacggttac 221  Q
    |||| ||||||| ||||||  ||||||  |||| |||||||||||            ||||         |||| |||||||||  |||  |||||||||    
T  49166040 cttcttgtagggttaaggaagttccgggctgtataatccggaaagctttaacattggattcttttgaaagagagtcattaatgtaggttaggacggttac 49166139  T
Q  222 aaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttc 321  Q
    |||||| |||| ||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49166140 aaccactaacatgttttcattgactgtagtaatgatctaggacttgttttaggctataaataggcttccatcttc-acaaataccttcattcttcacttc 49166238  T
Q  322 acctcttttctt 333  Q
    || |||||||||    
T  49166239 acatcttttctt 49166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 119 - 333
Target Start/End: Complemental strand, 39353529 - 39353294
Alignment:
Q  119 tggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaa------------gattc---------agagcc 197  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||            |||||         |||| |    
T  39353529 tggtgagcgagggaaaagttggcacttcttgtagagctaaggacactccggaatgtaaaatccggaaaacctcagcattggattcttttgaaagagagtc 39353430  T
Q  198 attaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttca 297  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  39353429 attaatgtgggtttggacggttacaaccactaacacgttttcattgactgtattaatgacctaggatttgttttaggctataaataggcttccatcttca 39353330  T
Q  298 acaaataccttcattcttcacttcacctcttttctt 333  Q
    ||| |||| ||||||||||||||| |||||||||||    
T  39353329 acagatacattcattcttcacttcgcctcttttctt 39353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 41193717 - 41193858
Alignment:
Q  192 agagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttcca 291  Q
    ||||| ||||||||| |||| ||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||    
T  41193717 agagctattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggacttgttttaggctataaatatgcttcca 41193816  T
Q  292 tcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  41193817 tcttcaacaaataccttcattctccacttcacctcttttctt 41193858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 41174910 - 41174802
Alignment:
Q  229 aacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctctt 328  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41174910 aacacgttttcattgactgtattaatgacataggacttgttttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacatctt 41174811  T
Q  329 ttcttacat 337  Q
    |||||||||    
T  41174810 ttcttacat 41174802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 31765207 - 31765335
Alignment:
Q  197 cattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttc 296  Q
    |||||||||  ||||  |||||||||||||| |||||||||| ||||| || | |||||||||||||||| ||||||| |||||||||||||||||||||    
T  31765207 cattaatgtaggtttgaacggttacaaccactaacacgtttttattgactgcactaatgacctaggacttgttttaggttataaataggcttccatcttc 31765306  T
Q  297 aacaaataccttcattcttcacttcacct 325  Q
    |||||||||||||||||||||||||||||    
T  31765307 aacaaataccttcattcttcacttcacct 31765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 53814910 - 53814808
Alignment:
Q  95 tttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcaga 194  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||    
T  53814910 tttttcggattaatgcgataatggtg---aacgagggaaaagttggcacttcctgcagggctaaggacgttccggaatgtaaaatctggaaagattcaga 53814814  T
Q  195 gccatt 200  Q
    | ||||    
T  53814813 gtcatt 53814808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 33843623 - 33843509
Alignment:
Q  223 accacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttca 322  Q
    ||||| ||||||||||  |||| |||  | |||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  33843623 accacaaacacgttttatttgactgtggttatgatctaggacttgttttaggctataaataggtttccatcttcaacaaattccttcattcttcacttca 33843524  T
Q  323 cctcttttcttacat 337  Q
    |||||||| ||||||    
T  33843523 cctctttttttacat 33843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 51328989 - 51329073
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||| ||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  51328989 atgaactaggacttgttttaggctataaataggcttgcatgttcaacaaattccttcattcttcacttcacctcttttattacat 51329073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 42899285 - 42899210
Alignment:
Q  262 gacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  42899285 gacttgttttaggctataaataggcttgcattttcaacaaattccttcattcttcacttcaccttttttcttacat 42899210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 25214595 - 25214677
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||| ||||||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  25214595 atgatctaggacttgttttaggctataaatagacttacatctttaacaaattccttcattcttcaattcaccacttttcttac 25214677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 53394018 - 53393942
Alignment:
Q  257 cctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    |||| ||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||||| | ||||||||||    
T  53394018 cctaagacttgttttaggctataaataggcttgcatgttcaacaaattccttcattcttcactttatctcttttctt 53393942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 45405667 - 45405776
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | |||||||| |||| |||| |||||||||| ||| ||  ||||||||||| | | ||||||||||||||||||||     
T  45405667 gaacacgttttatttgactgtacttatgacctatgactgatttaaggctataaaaaggtttggatcttcaacaatttctttcattcttcacttcacctcc 45405766  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  45405767 tttcttacat 45405776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 31765021 - 31765182
Alignment:
Q  30 caccggccatgac--tgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaa 125  Q
    |||||||||||||  ||||||| ||||||| ||| ||| ||||||| || |  |||||||| ||||||||||  ||||||||| ||||| ||||   |||    
T  31765021 caccggccatgacactgatgcagtccggaaaatacaatccggaatgtacctttgttttccgaaatatattttg-cggattaatacgatactggt---gaa 31765116  T
Q  126 cgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattca 192  Q
    ||||||||||||||||||||| |||| || ||||||  |||| |||||||  |||||||||| ||||    
T  31765117 cgagggaaaagttggcacttcttgta-ggttaaggaagttccagaatgtattatccggaaagcttca 31765182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 27023961 - 27023916
Alignment:
Q  290 catcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  27023961 catcttcaacaaattccttcattcttcacttcacctcttttcttac 27023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 41193607 - 41193691
Alignment:
Q  100 cggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaag 187  Q
    ||||||||||||||| ||||   |||||||| ||||||||||||||| ||||||| ||||||  || ||||||||||||| |||||||    
T  41193607 cggattaatgcgatattggt---gaacgaggaaaaagttggcacttcttgtagggttaaggaagtttcggaatgtaaaattcggaaag 41193691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 10494778 - 10494862
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||||||| |||| ||||  | ||||||||| ||||  ||||||||||| | ||||||||||||||||||||| |||||||||||    
T  10494778 atgacctatgactgatttacgactataaatatgcttagatcttcaacaatttccttcattcttcacttcaccttttttcttacat 10494862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 12717690 - 12717644
Alignment:
Q  291 atcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  12717690 atcttcaacaatttccttcattcttcacttcacctcttttcttacat 12717644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 333
Target Start/End: Complemental strand, 18876141 - 18876038
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | | ||| || ||||||||| |||||||||| ||||||  ||||||||||  | |||||||||||  |||||||||     
T  18876141 gaacacgttttatttgactgtaattaagacatatgacttatttaaggctataaaaaggcttggatcttcaacattttccttcattctt--cttcacctcc 18876044  T
Q  328 tttctt 333  Q
    ||||||    
T  18876043 tttctt 18876038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 21979925 - 21980032
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | | |||||| ||||||||| |||||||||| | ||||  |||||||| |  | |||||||||||  |||||||||     
T  21979925 gaacacgttttatttgactgtaattaagacctatgacttatttaaggctataaaaaagcttggatcttcaagattttccttcattctt--cttcacctcc 21980022  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  21980023 tttcttacat 21980032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 22002356 - 22002463
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||||||||  |||| |||| | | |||||| ||||||||| |||||||||| | ||||  |||||||| |  | |||||||||||  |||||||||     
T  22002356 gaacacgttttatttgactgtaattaagacctatgacttatttaaggctataaaaaagcttggatcttcaagattttccttcattctt--cttcacctcc 22002453  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  22002454 tttcttacat 22002463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 9119336 - 9119292
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaaca 300  Q
    ||||| |||||||||||||||||||| ||||||  ||||||||||    
T  9119336 acctatgacttattttaggctataaacaggcttggatcttcaaca 9119292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 48062263 - 48062203
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  48062263 acctatgacttgttttaggctataaaaaggcttgaatcttcaacattttccttcattcttc 48062203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 49327367 - 49327427
Alignment:
Q  256 acctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    ||||| ||||| |||||||||||||| ||||||  ||||||||||  | ||||||||||||    
T  49327367 acctatgacttgttttaggctataaaaaggcttgaatcttcaacattttccttcattcttc 49327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 31271650 - 31271346
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| |||||||||||||||||||||||||||||  ||||| |||||  |||||||||||||||||||  |||||||||| |||||||||||||||||    
T  31271650 caccggtcatgactgatgcattccggaatataaaatctggaatccacatctgttttccggaatatattttc-cggattaatgtgataatggtggtgaacg 31271552  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||||||||||||||||| | ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||    
T  31271551 agggaaaagttggcacttcctctagtgctaacgacattccggaatgtaaaatcccgaaagattcagagccattaatgtgggtttggacgattacaaccac 31271452  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
      ||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31271451 ttacacgttttcattaactgtattaatgacctatgacttgttttaggctataaataggcttccatcttcaacaaatactttcatttttcacttcacctct 31271352  T
Q  328 tttctt 333  Q
    ||||||    
T  31271351 tttctt 31271346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 30 - 333
Target Start/End: Complemental strand, 16395619 - 16395312
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  16395619 caccggccatgactgatgcattccggaatatataatccggaaagcacatttgttttccagaatatattttt-cggattgatgcgataatggtggtgaacg 16395521  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtt---acaac 224  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||| || ||||   |||||    
T  16395520 agggaaaagttggcacttcctatagggctaaggacattccgaaatgtaaaatccggaaatattcaaagccattaatgtgggtttggatggttacaacaac 16395421  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16395420 cactaacacgttttcattgactatattaatgacataggacttgttttaggctataaataggcttccatcgtcaacaaatactttcattcttcacttcacc 16395321  T
Q  325 tcttttctt 333  Q
    |||||||||    
T  16395320 tcttttctt 16395312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 35 - 333
Target Start/End: Complemental strand, 304052 - 303751
Alignment:
Q  35 gccatgactgatgcattccggaatataaaattcggaatgcaca--tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgaggga 132  Q
    ||||||||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||  ||||||| |||||||||| ||| ||||||| ||    
T  304052 gccatgactgatgcattccggaatataaaatccagaatgcacacttgttttccggaatatattttc-cggattattgcgataatgatgg-gaacgagaga 303955  T
Q  133 aaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtta---caaccacga 229  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  ||| |||| |||||||| ||||||||| ||||| ||||||||   ||||||| |    
T  303954 aaagttggcacttcctgtagggctaaggaaattccggaatgtaagctccagaaacattcagagtcattaatgtaagtttggacggttataacaaccacca 303855  T
Q  230 acacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttt 329  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  303854 acacgttttcattgattgtattaatgacctaggacttgttttaggctataaataggcttccattttcaacaaataccttcattcttcacttcacctcttt 303755  T
Q  330 tctt 333  Q
    ||||    
T  303754 tctt 303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 439335 - 439024
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    ||||||||||||| |||||||||||||||||| ||| | ||| ||||||  |||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  439335 caccggccatgaccgatgcattccggaatatataatccagaaagcacatatgttttccataatatattttt-cggattaatgcgataatggtggtgaacg 439237  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggtta---caac 224  Q
    |||||||| || ||||||| | ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| |||| ||||||||   ||||    
T  439236 agggaaaaattagcacttcctatagggctaaggacattccggaatgtaaaatccgaaaagattcaaagtcattaatgtgggtttggacggttacaacaac 439137  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| ||||||||||| |||| | || |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  439136 cactaacacgttttcgttgactatactaatgacctaggacttgttttaggctataaatagacttccatcttcaacaaataccttcattcttcacttcacc 439037  T
Q  325 tcttttcttacat 337  Q
    |||||||||||||    
T  439036 tcttttcttacat 439024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 30 - 330
Target Start/End: Original strand, 9304793 - 9305091
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacatgt--tttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||| |||||||||| |||||||||| ||||||| ||||||| || | |  |||||||||||| ||||  ||||||||||||||||||| |   ||||    
T  9304793 caccggtcatgactgatacattccggaaaataaaatacggaatgtacctttattttccggaatatgttttc-cggattaatgcgataatggcg---aacg 9304888  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaaccac 227  Q
    ||||| | ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  9304889 agggagaggttggcacttcctgtagggctaatgacgttccggaatgtaaaatccggaaagattcagagccattattgtgggttttgacggttacaaccac 9304988  T
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
     |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  | ||| ||||||||||||||||| |||||||||||||    
T  9304989 taacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttttaccttaaacaaataccttcattcatcacttcacctct 9305088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 31722719 - 31723016
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaatgcacat--gttttccggaatatattttttcggattaatgcgataatggtggtgaacg 127  Q
    |||||||||||||||||||||||||||||||| |||  |||| ||||||  |||||||||||||||||||  |||||||||||||||| |||||  ||||    
T  31722719 caccggccatgactgatgcattccggaatatataatctggaaagcacatctgttttccggaatatattttc-cggattaatgcgataagggtggcaaacg 31722817  T
Q  128 agggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaaagattcagagccattaatgtgagttttgacggttacaac--- 224  Q
    |||||||||||||||||||   ||||||||||||||||||||||              ||||||||||||||||||||| |||| || |||||||||       
T  31722818 agggaaaagttggcacttcccatagggctaaggacattccggaa--------------agattcagagccattaatgtgggtttggatggttacaacaac 31722903  T
Q  225 cacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacc 324  Q
    ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  31722904 cactaacacgttttcattgactgtattaatgacctaggacttgttttaggctataaataggcttccatcttcaacaaagaccttcattcttcacttcatc 31723003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 86 - 333
Target Start/End: Complemental strand, 31318795 - 31318531
Alignment:
Q  86 ggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaaatccggaa 185  Q
    ||||||||||||| ||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  31318795 ggaatatattttt-cggattaatgcgataatggtt---aacgagggaaaagttggcacttcttgtagggctaaggacactccggaatgtaaaatctggaa 31318700  T
Q  186 agattcag---------------------agccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggac 264  Q
    || |||||                     ||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  31318699 agcttcagcattggattcttttgaaagtgagccattaatgtgggtttggacggttacaaccactaacacgttttcattgactgtagtaatgacctaggac 31318600  T
Q  265 ttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttctt 333  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31318599 ttgttttaggctataaataggctttcatcttcaacaaataccttcattcttcacttcacctcttttctt 31318531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 337
Target Start/End: Complemental strand, 20818649 - 20818525
Alignment:
Q  213 gacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcatt 312  Q
    ||||||||  ||||| ||||||||||||||||||||| | ||||| || |||||||||||| |||||||||  |||||||||||||||||| ||||||||    
T  20818649 gacggttagcaccacaaacacgttttcattgattgtacttatgacgtatgacttattttagactataaatatacttccatcttcaacaaattccttcatt 20818550  T
Q  313 cttcacttcacctcttttcttacat 337  Q
    ||| |||||||||||||||||||||    
T  20818549 ctttacttcacctcttttcttacat 20818525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 28546961 - 28546866
Alignment:
Q  241 ttgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    ||||||||| | ||||  ||||||| ||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||||| ||||||||||    
T  28546961 ttgattgtagttatgatttaggactgattttaggctataaataggcttgaatcttcaacaatttcctt-attcttcacttcacctcctttcttacat 28546866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 6837260 - 6837344
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttacat 337  Q
    |||| |||||||| |||| || |||||||||||  |  |||||||| || | |||||||||||||||||||||||||||||||||    
T  6837260 atgatctaggactgatttaagactataaatagggctggatcttcaataatttccttcattcttcacttcacctcttttcttacat 6837344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 17519930 - 17519848
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||| ||| ||||| |||||||||||||||| | || ||| ||||| |||| ||| |||||||||||||| |||||| |||||    
T  17519930 atgatctatgacttgttttaggctataaatatgtttgcatgttcaagaaattcctccattcttcacttcatctctttccttac 17519848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 12305133 - 12305196
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttc 316  Q
    |||||||| |||| |||| |||||||||| ||||||  ||||||||||| | ||||||||||||    
T  12305133 atgacctatgactgatttaaggctataaaaaggcttgaatcttcaacaatttccttcattcttc 12305196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 11975285 - 11975243
Alignment:
Q  30 caccggccatgactgatgcattccggaatataaaattcggaat 72  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  11975285 caccagccatgactgatgcattccggaatatataatccggaat 11975243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 177 - 331
Target Start/End: Complemental strand, 1808 - 1654
Alignment:
Q  177 aatccggaaagattcagagccattaatgtgagttttgacggttacaaccacgaacacgttttcattgattgtattaatgacctaggacttattttaggct 276  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||  |||||| |||| |||||||||||| || | ||| |||||| ||    
T  1808 aatccggaaagattcagagccattaatgtgggtttggacggttacaaccactaacttgttttcgttgactgtattaatgacttaaggcttgttttagact 1709  T
Q  277 ataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttc 331  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  1708 ataaataggcttccaacttcaacaaataccttcattcttcagttcacctattttc 1654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 19067 - 19167
Alignment:
Q  237 ttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttaca 336  Q
    |||||||| |||| | |||||||| ||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||    
T  19067 ttcattgactgtacttatgacctaagacttgttttaggctataaataggctctcatcttcaacaaattccttcattcttcacttcaactcttttcttaca 19166  T
Q  337 t 337  Q
    |    
T  19167 t 19167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 8146 - 8255
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||| ||||  ||||||||||| |||| ||||||||  ||| ||||||||| |||||||  ||||| ||||| | |||||||||||||||||||||||    
T  8146 gaacacattttatttgattgtatttatgatctaggactggtttaaggctataactaggcttggatctttaacaatttccttcattcttcacttcacctct 8245  T
Q  328 tttcttacat 337  Q
    ||||||||||    
T  8246 tttcttacat 8255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 51941 - 51836
Alignment:
Q  228 gaacacgttttcattgattgtattaatgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctct 327  Q
    |||||| ||||  ||||||||| | |||| ||||||||| |||||||||||||||||| || ||||||||||  || ||||||||||| |||||||||||    
T  51941 gaacacattttatttgattgtagttatgatctaggacttgttttaggctataaataggtttgcatcttcaac--attccttcattcttaacttcacctct 51844  T
Q  328 tttcttac 335  Q
    ||||||||    
T  51843 tttcttac 51836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 17301 - 17383
Alignment:
Q  253 atgacctaggacttattttaggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    |||| ||||||||| |||||||||||||||||| ||  ||||||||||||| | ||||||||||||||||||| |||||||||    
T  17301 atgatctaggacttgttttaggctataaataggtttgtatcttcaacaaattctttcattcttcacttcacctattttcttac 17383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 427263 - 427326
Alignment:
Q  272 aggctataaataggcttccatcttcaacaaataccttcattcttcacttcacctcttttcttac 335  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||    
T  427263 aggctataaataggcttgcatcttcaacaatttccttcattcttcacttcacctcttttgttac 427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 47321 - 47431
Alignment:
Q  78 tgttttccggaatatattttttcggattaatgcgataatggtggtgaacgagggaaaagttggcacttcatgtagggctaaggacattccggaatgtaaa 177  Q
    |||||||||||||||| |||| |||||||||   || ||  |||||||||||||||||||||| ||||| ||||||| ||||||  ||| ||| |||| |    
T  47321 tgttttccggaatata-ttttccggattaat---atgatactggtgaacgagggaaaagttggtacttcttgtagggttaaggaagttctggactgtata 47416  T
Q  178 atccggaaagattca 192  Q
    |||||||||| ||||    
T  47417 atccggaaagcttca 47431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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