View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0684_low_67 (Length: 306)

Name: NF0684_low_67
Description: NF0684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0684_low_67
NF0684_low_67
[»] chr3 (40 HSPs)
chr3 (19-306)||(17025513-17025800)
chr3 (40-225)||(757856-758042)
chr3 (41-265)||(35456411-35456636)
chr3 (33-258)||(25726233-25726458)
chr3 (35-266)||(10708152-10708383)
chr3 (40-225)||(24037863-24038045)
chr3 (40-225)||(29350660-29350844)
chr3 (33-225)||(7570708-7570899)
chr3 (40-225)||(23660956-23661138)
chr3 (40-225)||(23665615-23665797)
chr3 (40-189)||(18467645-18467793)
chr3 (44-224)||(46964433-46964614)
chr3 (41-225)||(27709353-27709535)
chr3 (40-192)||(55326196-55326346)
chr3 (40-171)||(18472427-18472557)
chr3 (41-183)||(39775260-39775401)
chr3 (35-258)||(11399777-11400000)
chr3 (40-189)||(14438226-14438372)
chr3 (83-189)||(8883608-8883714)
chr3 (44-142)||(18011739-18011837)
chr3 (35-189)||(45904096-45904249)
chr3 (19-208)||(3656738-3656924)
chr3 (83-183)||(3673024-3673124)
chr3 (83-189)||(3034081-3034187)
chr3 (83-189)||(8070116-8070222)
chr3 (83-189)||(8888368-8888474)
chr3 (116-225)||(20520450-20520560)
chr3 (200-258)||(28125687-28125745)
chr3 (52-109)||(20168844-20168901)
chr3 (83-183)||(3693056-3693156)
chr3 (40-191)||(48431882-48432034)
chr3 (33-93)||(55431728-55431788)
chr3 (90-189)||(10585740-10585839)
chr3 (42-137)||(19339727-19339822)
chr3 (148-225)||(12899253-12899331)
chr3 (146-225)||(3419513-3419592)
chr3 (40-130)||(2207333-2207422)
chr3 (90-208)||(12965396-12965514)
chr3 (154-222)||(1640436-1640504)
chr3 (137-198)||(55431797-55431858)
[»] chr4 (37 HSPs)
chr4 (35-266)||(6943196-6943426)
chr4 (40-224)||(19540672-19540856)
chr4 (40-225)||(37259356-37259538)
chr4 (40-225)||(31269447-31269628)
chr4 (40-225)||(31273936-31274117)
chr4 (42-234)||(13065285-13065476)
chr4 (55-223)||(23093549-23093717)
chr4 (19-225)||(16421438-16421645)
chr4 (40-225)||(51698338-51698525)
chr4 (19-225)||(55252062-55252269)
chr4 (41-263)||(15805093-15805314)
chr4 (34-225)||(39216594-39216785)
chr4 (43-225)||(12823380-12823563)
chr4 (40-225)||(37264056-37264238)
chr4 (40-190)||(5927743-5927892)
chr4 (43-225)||(19107033-19107214)
chr4 (40-189)||(31766292-31766440)
chr4 (40-189)||(5270950-5271096)
chr4 (40-189)||(31728918-31729064)
chr4 (35-193)||(32081650-32081807)
chr4 (40-189)||(8694134-8694282)
chr4 (35-224)||(42316118-42316310)
chr4 (120-225)||(42758348-42758455)
chr4 (95-189)||(41817232-41817326)
chr4 (155-265)||(26188138-26188248)
chr4 (35-225)||(43477521-43477710)
chr4 (90-189)||(3997612-3997711)
chr4 (54-189)||(34560831-34560966)
chr4 (44-130)||(1150953-1151039)
chr4 (40-130)||(16595610-16595700)
chr4 (124-225)||(33462856-33462957)
chr4 (40-225)||(19102399-19102584)
chr4 (34-127)||(2820208-2820301)
chr4 (116-208)||(8029851-8029944)
chr4 (116-225)||(47244637-47244746)
chr4 (137-225)||(48276149-48276238)
chr4 (49-109)||(3309587-3309647)
[»] scaffold0009 (2 HSPs)
scaffold0009 (33-266)||(147840-148074)
scaffold0009 (126-173)||(163986-164033)
[»] chr8 (38 HSPs)
chr8 (46-258)||(24672782-24672994)
chr8 (35-264)||(26779531-26779760)
chr8 (40-190)||(15951078-15951228)
chr8 (40-225)||(44925413-44925597)
chr8 (19-225)||(38181734-38181941)
chr8 (33-225)||(19167058-19167251)
chr8 (33-266)||(22714443-22714675)
chr8 (34-225)||(1910446-1910638)
chr8 (35-225)||(18875880-18876070)
chr8 (34-266)||(7002064-7002297)
chr8 (134-266)||(2966144-2966276)
chr8 (33-225)||(17020762-17020955)
chr8 (33-225)||(17551199-17551392)
chr8 (40-225)||(1807868-1808050)
chr8 (83-189)||(31449415-31449521)
chr8 (35-266)||(23548065-23548297)
chr8 (35-225)||(15875184-15875378)
chr8 (85-225)||(17026390-17026531)
chr8 (85-225)||(17556882-17557023)
chr8 (146-225)||(33417054-33417134)
chr8 (54-189)||(37772114-37772250)
chr8 (33-78)||(2966061-2966106)
chr8 (42-127)||(20072472-20072557)
chr8 (40-224)||(36684001-36684187)
chr8 (34-108)||(18260252-18260326)
chr8 (85-189)||(4237891-4237995)
chr8 (85-189)||(4242630-4242734)
chr8 (40-191)||(19954636-19954788)
chr8 (40-130)||(33416969-33417056)
chr8 (90-189)||(8330914-8331013)
chr8 (146-225)||(40125387-40125466)
chr8 (35-109)||(4543955-4544029)
chr8 (40-130)||(14035850-14035940)
chr8 (95-189)||(34818257-34818351)
chr8 (36-109)||(19950178-19950251)
chr8 (35-92)||(27415921-27415978)
chr8 (34-70)||(17793890-17793926)
chr8 (194-234)||(28863956-28863996)
[»] chr1 (23 HSPs)
chr1 (40-225)||(16649126-16649310)
chr1 (40-189)||(26927247-26927395)
chr1 (35-225)||(39200253-39200443)
chr1 (19-225)||(19798492-19798698)
chr1 (40-225)||(47450716-47450902)
chr1 (41-258)||(16036042-16036258)
chr1 (40-225)||(25844174-25844358)
chr1 (124-266)||(12260495-12260638)
chr1 (40-189)||(51041037-51041185)
chr1 (40-189)||(10140516-10140662)
chr1 (35-225)||(38621120-38621311)
chr1 (40-189)||(10135748-10135894)
chr1 (40-193)||(33300768-33300922)
chr1 (83-189)||(3094527-3094633)
chr1 (27-225)||(39587850-39588056)
chr1 (44-221)||(28434129-28434306)
chr1 (35-128)||(40166403-40166495)
chr1 (146-225)||(7882509-7882589)
chr1 (40-191)||(40232913-40233063)
chr1 (54-189)||(41097509-41097644)
chr1 (85-225)||(16833937-16834078)
chr1 (90-172)||(8267402-8267484)
chr1 (88-137)||(9328099-9328148)
[»] chr7 (28 HSPs)
chr7 (35-266)||(10387806-10388035)
chr7 (42-266)||(26286593-26286818)
chr7 (148-253)||(10532317-10532422)
chr7 (44-225)||(42626080-42626260)
chr7 (40-225)||(8268713-8268899)
chr7 (40-189)||(26341628-26341776)
chr7 (95-266)||(10392544-10392716)
chr7 (160-226)||(10499615-10499681)
chr7 (160-226)||(10504644-10504710)
chr7 (90-258)||(9008602-9008772)
chr7 (35-234)||(21671612-21671808)
chr7 (134-234)||(10499688-10499789)
chr7 (134-234)||(10504717-10504818)
chr7 (60-266)||(3046008-3046216)
chr7 (34-224)||(16372810-16373001)
chr7 (40-171)||(4930643-4930772)
chr7 (77-225)||(12799842-12799990)
chr7 (40-225)||(44422629-44422808)
chr7 (54-189)||(27256645-27256780)
chr7 (90-189)||(40864915-40865014)
chr7 (150-266)||(3285030-3285146)
chr7 (19-225)||(30258499-30258706)
chr7 (153-225)||(13313775-13313848)
chr7 (134-225)||(4580011-4580105)
chr7 (95-192)||(2595296-2595394)
chr7 (147-234)||(13344002-13344087)
chr7 (49-210)||(23319346-23319507)
chr7 (49-91)||(45748292-45748334)
[»] chr5 (31 HSPs)
chr5 (40-225)||(37248292-37248478)
chr5 (40-189)||(26667694-26667842)
chr5 (40-189)||(26939291-26939439)
chr5 (40-225)||(40148317-40148501)
chr5 (35-266)||(23757263-23757494)
chr5 (35-266)||(23822719-23822950)
chr5 (40-225)||(9726245-9726429)
chr5 (40-189)||(29167499-29167647)
chr5 (34-234)||(16115713-16115914)
chr5 (40-189)||(37549678-37549826)
chr5 (42-190)||(36429133-36429280)
chr5 (40-189)||(36424059-36424207)
chr5 (40-189)||(37652476-37652624)
chr5 (84-189)||(557135-557240)
chr5 (84-189)||(561907-562012)
chr5 (40-225)||(12103447-12103631)
chr5 (40-189)||(7452176-7452322)
chr5 (116-225)||(20180647-20180757)
chr5 (35-225)||(6513405-6513596)
chr5 (90-189)||(13301041-13301140)
chr5 (155-234)||(15414375-15414454)
chr5 (137-225)||(4872416-4872505)
chr5 (85-225)||(39518861-39519002)
chr5 (85-225)||(39523500-39523641)
chr5 (83-189)||(36941815-36941921)
chr5 (51-124)||(2860061-2860134)
chr5 (120-189)||(23977128-23977197)
chr5 (124-198)||(35679406-35679480)
chr5 (35-189)||(12044685-12044840)
chr5 (54-225)||(23688528-23688700)
chr5 (144-189)||(31732036-31732081)
[»] chr2 (24 HSPs)
chr2 (42-225)||(25496814-25496997)
chr2 (44-225)||(12797350-12797530)
chr2 (35-265)||(40847040-40847271)
chr2 (42-225)||(25477786-25477969)
chr2 (40-225)||(1934485-1934667)
chr2 (40-225)||(31327171-31327356)
chr2 (40-189)||(17968489-17968637)
chr2 (40-183)||(18344844-18344986)
chr2 (40-172)||(19892016-19892147)
chr2 (42-225)||(9180218-9180399)
chr2 (40-225)||(9184909-9185092)
chr2 (134-265)||(19578029-19578161)
chr2 (90-225)||(17453097-17453232)
chr2 (54-183)||(6297449-6297578)
chr2 (85-225)||(30651380-30651521)
chr2 (35-172)||(10160288-10160426)
chr2 (42-172)||(13291077-13291207)
chr2 (85-225)||(29678220-29678361)
chr2 (148-225)||(42926134-42926211)
chr2 (35-172)||(30643513-30643651)
chr2 (42-130)||(38591634-38591722)
chr2 (54-121)||(7712606-7712673)
chr2 (146-224)||(7737354-7737433)
chr2 (41-130)||(38427031-38427119)
[»] scaffold0352 (1 HSPs)
scaffold0352 (40-225)||(7526-7710)
[»] chr6 (24 HSPs)
chr6 (85-255)||(17914051-17914221)
chr6 (63-225)||(16835650-16835809)
chr6 (35-258)||(2759868-2760089)
chr6 (58-265)||(19994847-19995054)
chr6 (40-225)||(6407353-6407535)
chr6 (40-208)||(11559725-11559894)
chr6 (40-208)||(11570253-11570422)
chr6 (44-225)||(20747793-20747974)
chr6 (35-172)||(22694853-22694990)
chr6 (40-208)||(12689393-12689560)
chr6 (35-225)||(2699585-2699776)
chr6 (95-264)||(12405812-12405978)
chr6 (34-225)||(4156843-4157037)
chr6 (40-189)||(17964085-17964233)
chr6 (40-225)||(25313945-25314130)
chr6 (40-225)||(26201439-26201624)
chr6 (40-183)||(11534240-11534384)
chr6 (40-225)||(33687139-33687324)
chr6 (157-266)||(12799401-12799510)
chr6 (49-266)||(17599797-17600014)
chr6 (95-207)||(22610019-22610133)
chr6 (35-106)||(32001791-32001862)
chr6 (71-127)||(5856467-5856523)
chr6 (90-130)||(14042057-14042097)
[»] scaffold0240 (1 HSPs)
scaffold0240 (42-225)||(4395-4578)
[»] scaffold0054 (2 HSPs)
scaffold0054 (20-225)||(25854-26059)
scaffold0054 (20-225)||(29574-29779)
[»] scaffold0002 (2 HSPs)
scaffold0002 (40-225)||(443435-443619)
scaffold0002 (85-225)||(4526-4667)
[»] scaffold0020 (1 HSPs)
scaffold0020 (54-189)||(791-926)
[»] scaffold0182 (1 HSPs)
scaffold0182 (83-189)||(9431-9537)
[»] scaffold0690 (1 HSPs)
scaffold0690 (35-87)||(5712-5764)
[»] scaffold0060 (3 HSPs)
scaffold0060 (54-189)||(47523-47658)
scaffold0060 (54-189)||(52467-52602)
scaffold0060 (42-99)||(55682-55738)
[»] scaffold0041 (1 HSPs)
scaffold0041 (90-189)||(35255-35354)
[»] scaffold0061 (1 HSPs)
scaffold0061 (128-189)||(49534-49595)
[»] scaffold0018 (1 HSPs)
scaffold0018 (41-130)||(171356-171444)
[»] scaffold0017 (1 HSPs)
scaffold0017 (128-189)||(149039-149100)
[»] scaffold0008 (1 HSPs)
scaffold0008 (124-266)||(256292-256435)
[»] scaffold0045 (1 HSPs)
scaffold0045 (63-189)||(81231-81359)


Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 306
Target Start/End: Complemental strand, 17025800 - 17025513
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  17025800 ggacattatcattacaaaaagggactatggtcttaaaaatactttttattctgaagggacatatattatcgaaggaactatgttcttaagaactttctta 17025701  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgtta 218  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  17025700 atttcgaagggataatataccgaacatggacgaaggtcttaagaacactcttaaatctgaagggaaagaaaaaagagatggggagaagaataactcgtta 17025601  T
Q  219 acacaagccggagggataaaagggaaagtgttctcgacaattcaatagcaatttgtggatcaatttcaaaatgatatgattcagaaga 306  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||| |||| ||||||    
T  17025600 acacaagccggagggataagagggaaagagttctcgacaattcaatagtaatttgtggatcaatttcggaatgatacgatttagaaga 17025513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 758042 - 757856
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||| ||||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  758042 ggactatgatcttaaaagtactctttaatctgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 757943  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | || | |||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  757942 gaaaaagggactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 41 - 265
Target Start/End: Complemental strand, 35456636 - 35456411
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg 140  Q
    ||||||| |||||||| || | |||||| ||| |||||||| | ||||||||  | |||| |||||||| | || |||||| |||||||| | |||||||    
T  35456636 gactatgatcttaaaa-tattatttattttgatgggacataaactatcaaagagattatgctcttaagaccattcttaattccgaagggacattataccg 35456538  T
Q  141 aacatggactaaggtcttaagaacactcttaaatccaaaggga--aagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaa 238  Q
    || | | | ||||||||||||||||||| ||| ||| ||||||  ||||||||||||||| || |||||||||||||||||||||||| ||||||| ||     
T  35456537 aataggaattaaggtcttaagaacactcataattccgaagggacaaagaaaaaagagatgaggtgaagaataactcgttaacacaagctggagggagaag 35456438  T
Q  239 agggaaagtgttctcgacaattcaata 265  Q
    || ||||| ||| ||||||| ||||||    
T  35456437 agagaaagagttatcgacaactcaata 35456411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 258
Target Start/End: Complemental strand, 25726458 - 25726233
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    ||||| ||||||||| ||| | || |||| ||||||   ||||||||||||||||| |||| |||||||||||||||  ||| |||| |||||||||| |    
T  25726458 caaaattggactatgatctgataagtactctttatttcaaagggacatatattatcgaagggactatgttcttaagacatttcttaacttcgaagggaca 25726359  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
     ||| | ||| | ||| |||||||||||||||| |||||| | | |||||| ||||||| ||||||  ||||||||||| |||||||||||||||| |      
T  25726358 ttatgctgaataaggattaaggtcttaagaacattcttaatttcgaagggacagaaaaaggagatgaagagaagaataattcgttaacacaagccgaaat 25726259  T
Q  233 gataaaagggaaagtgttctcgacaa 258  Q
    || || || ||||| |||||||||||    
T  25726258 gagaagagagaaagagttctcgacaa 25726233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 10708383 - 10708152
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| |||||||||||||| ||| |||||||||||||| ||||  ||||||| |||| | ||||||||||| | |||||| | |    
T  10708383 aaaagggactatgatcttaataatactttttattccgaatggacatatattatcgaaggggctatgtttttaaaaccttttttaattccaaagggacatt 10708284  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||||||||   ||||||||||||| ||||||||||  ||| || ||| | ||||| |||||| | |||||||||  |||| || |||||  |||||||    
T  10708283 ataccgaacagaaactaaggtcttaaaaacactcttatttccgaaaggacataaaaaggagatgagaagaagaatagttcgtcaagacaagatggaggga 10708184  T
Q  235 taaaagggaaagtgttctcgacaattcaatag 266  Q
     || || ||||| |||||| |||| |||||||    
T  10708183 gaagagagaaagagttctctacaactcaatag 10708152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 24038045 - 24037863
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  24038045 ggactatgatcttaaaagtattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 24037949  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  24037948 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 24037863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 29350660 - 29350844
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||||| |||| |||||||| |||||| | || |||||| | |||||| | || |||    
T  29350660 ggactatgatcttaaaaatattctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattattaattccaaagggacattaaacc 29350758  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| | |||||||||||||||||| | | ||||||  |||||| ||||||  ||||||||  |||||| ||||||||    
T  29350759 gaaaagggactatgatcttaagaacactcttaatttcgaagggacggaaaaatgagatgaagagaagaaagactcgtcaacacaag 29350844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 7570899 - 7570708
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatc-aaaggaactatgttcttaagaacttttttaatttcgaagggat 131  Q
    |||| |||||||||| |||||||| |||| |||||||| || ||||||   ||||| ||||| |||||||| |||||| | || |||||||||||||||     
T  7570899 caaatatggactatgatcttaaaagtactctttattctaaatggacat---ttatcgaaagggactatgtttttaagaccattcttaatttcgaagggac 7570803  T
Q  132 aatataccgaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | || |||||| | || |||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  7570802 attaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 7570708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 23661138 - 23660956
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  23661138 ggactatgatcttaaaagtattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 23661042  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| ||||||  |||||| ||||||  ||||||||  |||||| ||||||||    
T  23661041 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacggaaaaaggagatgaagagaagaaagactcgtcaacacaag 23660956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 23665797 - 23665615
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  23665797 ggactatgatcttaaaagtattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 23665701  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     || |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  23665700 aaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 23665615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 18467645 - 18467793
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  18467645 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 18467743  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| | |||||||||||||||||  ||| |||||| |||||    
T  18467744 gaaaagggactatgatcttaagaacactcttatttccgaagggacagaaa 18467793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 224
Target Start/End: Original strand, 46964433 - 46964614
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg-aa 142  Q
    |||| |||||||| |||| |||||||||||||||||||||||||| |||  |||||||| |||||| | || ||||||   |||||| | || |||| ||    
T  46964433 tatgatcttaaaagtactctttattctgaagggacatatattatcgaagagactatgtttttaagaccattcttaattctaaagggacattaaaccgaaa 46964532  T
Q  143 catggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaa 224  Q
     | |||||| |||||||||||||||||||| ||| ||| || ||||||| ||||||  ||||||||  |||||| |||||||    
T  46964533 aagggactatggtcttaagaacactcttaattccgaagtgatagaaaaaggagatgaagagaagaaagactcgtcaacacaa 46964614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 225
Target Start/End: Original strand, 27709353 - 27709535
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg 140  Q
    ||||||| ||||||||||||| ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| ||||| || | || |||     
T  27709353 gactatgatcttaaaaatactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagagacattaaacca 27709449  T
Q  141 aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaag-agatggggagaagaataactcgttaacacaag 225  Q
    || | | |||| |||||||||||||||||||| | | |||||| ||||||||| |||||  ||||||||  |||||| ||||||||    
T  27709450 aaaaggaactatggtcttaagaacactcttaatttcgaagggacagaaaaaagtagatgaagagaagaaagactcgtcaacacaag 27709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 55326196 - 55326346
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| | |||||| |||||| | || |||||| |||| ||| | |  |||    
T  55326196 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggattatgtt-ttaagaccattcttaattccgaa-ggacattcaacc 55326293  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa 192  Q
    ||| |  ||||| |||||||||||||||||||| ||| |||||| ||||||||    
T  55326294 gaaaagcgactatggtcttaagaacactcttaattccgaagggacagaaaaaa 55326346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 18472427 - 18472557
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||  |||||||| |||| |||||||| ||||||||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  18472427 ggactatcatcttaaaagtactctttattctaaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaacc 18472525  T
Q  140 gaacatggactaaggtcttaagaacactctta 171  Q
    ||| | |||||| |||||||||||||||||||    
T  18472526 gaaaagggactatggtcttaagaacactctta 18472557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 39775401 - 39775260
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg 140  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||  | | |||||||| |||||| | || |||||| |||||||| | || |||     
T  39775401 gactatgatcttaaaagtactatttattctgaagggacatatattatcgcaaggactatgtt-ttaagaccattcttaattccgaagggacattaaaccc 39775303  T
Q  141 aacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    || | |||||| |||||||| ||||||||||| ||| ||||||    
T  39775302 aaaagggactatggtcttaataacactcttaattccgaaggga 39775260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 258
Target Start/End: Original strand, 11399777 - 11400000
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| ||| |||||||  ||| ||||||| |||||| |||  | |||| | |||| | |||| ||||||||||||||| | |    
T  11399777 aaaagggactatgatcttaaaactacgttttattacgaatggacatacattatcgaagagattatgcttttaatacctttcttaatttcgaagggacatt 11399876  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    |||||||| |  | | |||||||| |||||||| |||  ||  ||||||  |||||| |||| | | ||||||||| ||||| ||| ||||| |||||||    
T  11399877 ataccgaatagcgtcaaaggtctttagaacacttttatttctgaagggacggaaaaatgagaagagaagaagaatagctcgtcaactcaagctggaggga 11399976  T
Q  235 taaaagggaaagtgttctcgacaa 258  Q
     || || ||||| |||||||||||    
T  11399977 gaagagagaaagagttctcgacaa 11400000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 14438372 - 14438226
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||| ||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  14438372 ggactatgatcttaaaagtactctttattctgaaggaacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 14438276  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||| |||||||  ||| |||||| |||||    
T  14438275 gaaaagggactatggtcttaagaatactcttatttccgaagggacagaaa 14438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 8883608 - 8883714
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| |||||||| | ||||||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  8883608 attatcgaaggtactatgctcttaagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 8883707  T
Q  183 aaagaaa 189  Q
    | |||||    
T  8883708 acagaaa 8883714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 18011739 - 18011837
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaa 142  Q
    |||||||||||||||| | |||||| ||||| |||||| |||||| |||| |||||||| |||||| | ||||| |||||||||||| |||||| ||||    
T  18011739 tatggtcttaaaaatattatttattttgaagcgacataaattatcgaagggactatgtttttaagaccatttttgatttcgaagggacaatataacgaa 18011837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 45904249 - 45904096
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    ||||||||| ||| |||||||| || | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || |||| ||||| |    
T  45904249 aaaatggaccatgatcttaaaa-tattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggatagt 45904151  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    | |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  45904150 aaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 45904096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 3656924 - 3656738
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| ||| |||| |||||| | |||| ||||||  |||||||| ||||||||| |||| ||||||||    ||| | || | |    
T  3656924 ggacattattattccaaaaagggattatgatcttaacagtactctttattacgaagggacttatattatcgaagggactatgtt----agaccattctga 3656829  T
Q  119 atttcgaagggataatataccgaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaa 208  Q
    |||||||||||| | || |||||| | || |||| |||||||||||||||||||| ||| |||||| | ||||| ||||||  ||||||||    
T  3656828 atttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaattccgaagggacaaaaaaaggagatgaagagaagaa 3656738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 3673024 - 3673124
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    ||||||||||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  3673024 attatcaaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 3673123  T
Q  183 a 183  Q
    |    
T  3673124 a 3673124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 3034081 - 3034187
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  3034081 attatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 3034180  T
Q  183 aaagaaa 189  Q
    | |||||    
T  3034181 acagaaa 3034187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 8070116 - 8070222
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  8070116 attatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 8070215  T
Q  183 aaagaaa 189  Q
    | |||||    
T  8070216 acagaaa 8070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 8888368 - 8888474
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| |||||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||  |||||    
T  8888368 attatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattctgaaggg 8888467  T
Q  183 aaagaaa 189  Q
    | |||||    
T  8888468 acagaaa 8888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 20520450 - 20520560
Alignment:
Q  116 ttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga-aagaaaaaagagatggggagaagaataactc 214  Q
    |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||| || ||||| ||||||  ||||||||  ||||    
T  20520450 ttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacaaaaaaaaggagatgaagagaagaaagactc 20520549  T
Q  215 gttaacacaag 225  Q
    || ||||||||    
T  20520550 gtcaacacaag 20520560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 28125687 - 28125745
Alignment:
Q  200 ggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgacaa 258  Q
    ||||||||||||||||||||||||||| ||||||| || || ||||| |||||||||||    
T  28125687 ggagaagaataactcgttaacacaagctggagggagaagagagaaagagttctcgacaa 28125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 20168901 - 20168844
Alignment:
Q  52 taaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaaga 109  Q
    |||||||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||    
T  20168901 taaaaatactttttatttcgaagggacataaattattaaagaaactatgttcttaaga 20168844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 3693056 - 3693156
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  3693056 attatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 3693155  T
Q  183 a 183  Q
    |    
T  3693156 a 3693156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 48432034 - 48431882
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggg--ataatata 137  Q
    ||||| || |||||| |||||| ||  ||| ||||||||| |  ||||| |||| ||||||||||||||| | || ||||||||||||||  || ||| |    
T  48432034 ggactttgatcttaagaatactcttatttccgaagggacaaaatttatcgaagggactatgttcttaagaccattcttaatttcgaagggacattataaa 48431935  T
Q  138 ccgaacatggactaaggtcttaagaacactc-ttaaatccaaagggaaagaaaaa 191  Q
    ||||  |||||||| ||  |||||||||||| |||||||| |||||| |||||||    
T  48431934 ccga--atggactatggcattaagaacactctttaaatccgaagggacagaaaaa 48431882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 55431728 - 55431788
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaagg 93  Q
    |||| ||||| |||| |||||||| |||| |||||||||||||||||||||||||| ||||    
T  55431728 caaatatggattatgatcttaaaagtactctttattctgaagggacatatattatcgaagg 55431788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 10585839 - 10585740
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |||||||| ||||||||||| ||| |||||| |||||    
T  10585839 aagggactatgctcttaagaccattcttatttccgaaaggataataaaccgatgatggactatggtcttaaaaacactcttaattccgaagggacagaaa 10585740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 19339727 - 19339822
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatata 137  Q
    |||||||||||||||||| | |||||| ||||| |||||| |||||  || |||||||| | |||||| | || ||||||| ||||||| ||||||    
T  19339727 actatggtcttaaaaatattatttattttgaagcgacataaattattgaatgaactatggttttaagaccattcttaattttgaagggacaatata 19339822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 12899331 - 12899253
Alignment:
Q  148 actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaag-agatggggagaagaataactcgttaacacaag 225  Q
    |||| ||||||| |||||||||||| ||| |||||| | ||| ||| ||||||||||||||||| |||||||| |||||    
T  12899331 actatggtcttatgaacactcttaattccgaagggacataaataaggagatggggagaagaatagctcgttaagacaag 12899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 3419513 - 3419592
Alignment:
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||||| |||||||||||||| ||||| ||| |||||| | ||||| ||||||  ||||||||  |||||| ||||||||    
T  3419513 ggactatggtcttaagaacacccttaattccgaagggacataaaaaggagatgaagagaagaaagactcgtcaacacaag 3419592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 2207422 - 2207333
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||| ||| |||||||| |||| ||||||| |||| ||||||||||||  |||| |||||| | |||||| | || |||||||||||||||    
T  2207422 ggaccatgatcttaaaagtactctttattccgaagagacatatattattgaagggactatgct-ttaagaccattcttaatttcgaaggga 2207333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 12965514 - 12965396
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| ||||||  ||||||| | || ||||||||||||||| | || |||||| | ||| || |||||| |||||| |||||| ||| |||||| |||||    
T  12965514 aagggactatgaacttaagaccattcttaatttcgaagggacattaaaccgaaaagggagtatggtcttcagaacattcttaattccgaagggacagaaa 12965415  T
Q  190 aaagagatggggagaagaa 208  Q
     | ||||||  ||||||||    
T  12965414 taggagatgaagagaagaa 12965396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 1640504 - 1640436
Alignment:
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaaaaag-agatggggagaagaataactcgttaacac 222  Q
    |||||||||||||||| ||||||||| |||| ||||| || |||||  |||||||| |||||||||||||    
T  1640504 gtcttaagaacactctcaaatccaaa-ggaacgaaaagagaagatgaagagaagaacaactcgttaacac 1640436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 55431797 - 55431858
Alignment:
Q  137 accgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatg 198  Q
    |||||| | |||||| |||||||||||||||||||| ||| |||||| | ||||| ||||||    
T  55431797 accgaaaagggactatggtcttaagaacactcttaattccgaagggacataaaaaggagatg 55431858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 266
Target Start/End: Original strand, 6943196 - 6943426
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| ||||||||||||| ||||||| ||| |||||||||||||| |||  ||||| || |||||| |||| ||||||  ||||||| | |    
T  6943196 aaaagggactatgatcttaaaaatactatttattccgaatggacatatattatcgaagagactatttttttaagacctttcttaattctgaagggacatt 6943295  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||| | ||||| |||| | ||| ||||||| || || ||||||||| |||||||    
T  6943296 ataccgaatatggactaaggtcttaagaacactcttaattccgaagggaca-aaaaaggagacgaggataagaatagctagtcaacacaagctggaggga 6943394  T
Q  235 taaaagggaaagtgttctcgacaattcaatag 266  Q
     || || ||||| ||||||||||| |||||||    
T  6943395 gaagagcgaaagagttctcgacaactcaatag 6943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 19540856 - 19540672
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  19540856 ggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 19540757  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaa 224  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| ||||||| |||||   ||||||||  |||||| |||||||    
T  19540756 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagattaagagaagaaagactcgtcaacacaa 19540672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 37259538 - 37259356
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| ||||||||||| | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  37259538 ggactatgatcttaaaaatattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 37259442  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  37259441 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 37259356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 31269447 - 31269628
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  31269447 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 31269542  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  31269543 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 31269628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 31273936 - 31274117
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  31273936 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 31274031  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  31274032 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 31274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 13065476 - 13065285
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| |||||||| |  | ||||||  ||||||||||| |||||| ||||  ||||||| |||||| |||| |||||| |||||||| | ||| ||||    
T  13065476 actatgatcttaaaagtcatatttatttcgaagggacatacattatcgaaggggctatgtttttaagacctttcttaattccgaagggacattatgccga 13065377  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    | | ||||||||||||||||||||||||||  | |||||||| |||||||| ||||| ||||||||||  ||| | ||||||||| |||||||    
T  13065376 atagggactaaggtcttaagaacactcttattttcaaagggacagaaaaaa-agatgaggagaagaatggctcatcaacacaagctggaggga 13065285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 23093549 - 23093717
Alignment:
Q  55 aaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaagg 154  Q
    ||||||| |||||| |||||||| ||  ||||||||| | ||||||||||||||| |||| ||||||||||| ||| | ||||| ||| | |||||||||    
T  23093549 aaatactctttattttgaagggaaatgaattatcaaatggactatgttcttaagacctttcttaatttcgaatggacattatacggaatagggactaagg 23093648  T
Q  155 tcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacaca 223  Q
    ||||||||| |||||||| | | |||||| | ||| ||||||||  |||||||||| ||||| ||||||    
T  23093649 tcttaagaaaactcttaatttcgaagggacaaaaataagagatgaagagaagaatagctcgtcaacaca 23093717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 16421438 - 16421645
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| |||||||| |||||| | |||| |||||||  ||||||| ||||||||| |||| |||||||| |||||| | || |||    
T  16421438 ggacattattattccaaaaagggactatgatcttaatagtactctttattccaaagggacttatattatcgaagggactatgtttttaagaccattctta 16421537  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtt 217  Q
    ||| |||||||| | || |||||  | |||||| |||||||||||||||||||| ||| || ||| |||||||| ||||||  ||||||||  ||||||     
T  16421538 attccgaagggacattaaaccgagaagggactatggtcttaagaacactcttaattccgaatggacagaaaaaaggagatgaagagaagaaagactcgtc 16421637  T
Q  218 aacacaag 225  Q
    ||||||||    
T  16421638 aacacaag 16421645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 51698338 - 51698525
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaa-gggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatac 138  Q
    |||||| | |||||||| ||||  |||||||||| ||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || ||    
T  51698338 ggactacgatcttaaaagtactcattattctgaatgggacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaac 51698437  T
Q  139 cgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||| | ||||||  ||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  51698438 cgaaaagggactattgtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 51698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 55252062 - 55252269
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| |||||||| |||||| | || | ||||||| |||||||| ||||||||| || |  ||||||| |||||| | ||  ||    
T  55252062 ggacattattattccaaaaagggactatgatcttaatagtattctttattccgaagggacttatattatcgaatgggctatgtttttaagaccattccta 55252161  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtt 217  Q
    |||||||||||| | || |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  ||||||     
T  55252162 atttcgaagggacattaaaccgagaatggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtc 55252261  T
Q  218 aacacaag 225  Q
    ||||||||    
T  55252262 aacacaag 55252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 15805314 - 15805093
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg 140  Q
    ||||||||| |||||| || | ||||||| |||||| |||| ||||||||||| |||||| | ||||||   || |||||| |||||||| | |||||||    
T  15805314 gactatggtattaaaa-tattatttattccgaaggggcataaattatcaaagggactatgctattaagattattcttaattccgaagggacattataccg 15805216  T
Q  141 aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaag 240  Q
    || |  ||  ||||||||||||||| || ||| ||  |||||| |||||||  ||||| ||||||||||| ||||||||||||||| ||| ||| || ||    
T  15805215 aatagagataaaggtcttaagaacagtcataattctgaagggatagaaaaagtagatgaggagaagaatatctcgttaacacaagctggaaggagaagag 15805116  T
Q  241 ggaaagtgttctcgacaattcaa 263  Q
     ||||| ||||||||||| ||||    
T  15805115 agaaagagttctcgacaactcaa 15805093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 39216785 - 39216594
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatat-tatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||||||||||| | |||||| || | |||||||  |||||||||| |  |||  |||| |||||| ||| |||| |||| ||||||||||||||| |    
T  39216785 aaaaatggactatgattttaaaa-tattatttattccaaagggacataaaaatattgaagggactatgctctcaagacctttcttaatttcgaagggaca 39216687  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||||| | |||||| |||||||||||||||||| | |   |||||| ||||||| |||||| ||||||||||| ||||||||||||||    
T  39216686 ttataccgaatagggactatggtcttaagaacactcttgattttgaagggacagaaaaaggagatgaggagaagaatagctcgttaacacaag 39216594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 225
Target Start/End: Complemental strand, 12823563 - 12823380
Alignment:
Q  43 ctatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaa 142  Q
    ||||| |||||| |||||| ||||||| ||| |||| ||||||||| || | |||||||| |||||| | |||||||||  ||||||| | || || |||    
T  12823563 ctatgatcttaataatactctttattccgaaaggacttatattatcgaatggactatgtttttaagaccatttttaattctgaagggacattaaactgaa 12823464  T
Q  143 catggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
     | ||| || |||||||||||||||||||| ||| |||||| |||||||| ||||||| ||||||||  |||||| ||||||||    
T  12823463 aagggattatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatggagagaagaaagactcgtcaacacaag 12823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 37264238 - 37264056
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || ||     
T  37264238 ggactatgatcttaaaagtattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaact 37264142  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| | ||||| ||||||  ||||||||  |||||| ||||||||    
T  37264141 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacataaaaaggagatgaagagaagaaagactcgtcaacacaag 37264056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 5927892 - 5927743
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||| ||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  5927892 ggactatgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 5927794  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaa 190  Q
    ||| | |||||| ||||||||||||||| |||| ||| || ||| ||||||    
T  5927793 gaaaagggactatggtcttaagaacacttttaattccgaatggacagaaaa 5927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 225
Target Start/End: Original strand, 19107033 - 19107214
Alignment:
Q  43 ctatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaa 142  Q
    ||||| |||||||| |||| ||||||| |||| ||||||||||||| |||| |||||||| |||||| | || ||||||||||||||| | || ||||||    
T  19107033 ctatgatcttaaaagtactctttattccgaagagacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaaccgaa 19107131  T
Q  143 catggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     | | |||| ||||||||||| |||||||| ||| |||||| ||| ||| |||||   ||||||||  |||||| ||||||||    
T  19107132 aaggaactatggtcttaagaatactcttaagtccgaagggacagagaaaggagataaagagaagaaagactcgtcaacacaag 19107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 31766292 - 31766440
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||| |||||| | || |||||| |||||||| | || ||     
T  31766292 ggactatgatcttaaaagtactttttattctgaagggacatatattatcgcagggactatgtt-ttaagaccattcttaattccgaagggacattaaact 31766390  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||| |||||||| ||| || ||| |||||    
T  31766391 gaaaagggactatggtcttaagaatactcttaattccgaaaggacagaaa 31766440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 5271096 - 5270950
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  5271096 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 5271000  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||  ||| |||||| |||||    
T  5270999 gaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 5270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 31729064 - 31728918
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||||||||||||||||||||||   ||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  31729064 ggactatgatcttaaaagtactttttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattcagaagggacattaaacc 31728968  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||  ||| |||||| |||||    
T  31728967 gaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 31728918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 32081807 - 32081650
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| | |||| ||||||| |||||||| ||||||||| |||| |||||||| |||||| | || |||||| | |||||| | |    
T  32081807 aaaagggactatgatcttaatagtactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacatt 32081708  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaag 193  Q
    | |||||| | |||||| ||| |||||||||||||||| | | |||||| |||||||||    
T  32081707 aaaccgaaaagggactatggt-ttaagaacactcttaatttcgaagggacagaaaaaag 32081650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 8694134 - 8694282
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||| ||||||||||||||||| || | |||||||| |||||| | || |||||| | |||||| | || | |    
T  8694134 ggactatgatcttaaaagtactctttattctaaagggacatatattatcgaatggactatgtt-ttaagaccattcttaattccaaagggacattaaatc 8694232  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
     || | |||||| |||||||||||||||||||| ||| |||||| |||||    
T  8694233 aaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 8694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 224
Target Start/End: Complemental strand, 42316310 - 42316118
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| || | |||||  |||||||||||| || ||  || | |||||  |||||||| | || ||||||||||||||| | |    
T  42316310 aaaagggactatgatcttaaaa-tattatttatcatgaagggacataaataattgaacggactatactcttaagaccattcttaatttcgaagggacatt 42316212  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa----gagatggggagaagaataactcgttaacacaa 224  Q
    |||||||| | | |||||||||| || ||||||||||| ||  |||||| ||||||||    |||||| ||||||||||| |||||||||||||    
T  42316211 ataccgaataggaactaaggtctcaataacactcttaattctgaagggacagaaaaaaaaatgagatgaggagaagaatagctcgttaacacaa 42316118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 42758455 - 42758348
Alignment:
Q  120 tttcgaagggataatataccgaaca-tggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtt 217  Q
    ||||||||||| | ||||||||| | ||||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  |||||||| |||||||     
T  42758455 tttcgaagggacattataccgaaaaatggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaaaactcgtc 42758356  T
Q  218 aacacaag 225  Q
    ||||||||    
T  42758355 aacacaag 42758348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 41817232 - 41817326
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||||| |||||||| | || ||| ||||||| |||||||| |||||| |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  41817232 actatgctcttaagaccattcttattttcgaaaggataataaaccgaagatggactatggtcttaagaacactcttaattccgaagggacagaaa 41817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 26188248 - 26188138
Alignment:
Q  155 tcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcg 254  Q
    |||||||| |||||| ||||||||||||| | ||| | |||||| | |||| |||| | ||||||||||||| ||||||| || || ||||| |||||||    
T  26188248 tcttaagagcactctcaaatccaaagggacataaagaggagatgagaagaaaaatagcacgttaacacaagctggagggagaagagagaaagagttctcg 26188149  T
Q  255 acaattcaata 265  Q
    |||| ||||||    
T  26188148 acaactcaata 26188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 43477710 - 43477521
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    ||||||||||||| |||||||| || | |||||||| || ||||||| || ||  ||||  | ||| |||||||| | |||||||||   || ||| | |    
T  43477710 aaaatggactatgatcttaaaa-tattatttattctaaatggacataaataattgaaggggccatgctcttaagaccctttttaattctaaaaggacatt 43477612  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||||||| |  ||||||||| |||||||||| ||||| ||| || ||| |||||||  ||||| | |||| |||| ||||||||||||||    
T  43477611 ataccgaataatgactaaggttttaagaacacccttaattccgaaaggacagaaaaagaagatgagaagaataatagctcgttaacacaag 43477521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 3997711 - 3997612
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  ||||||||  ||||||||||||||||||| ||| |||||| |||||    
T  3997711 aagggactatgctcttaagaccattcttatttccgaaaggataataaaccgatgatggactatagtcttaagaacactcttaattccgaagggacagaaa 3997612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 34560831 - 34560966
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  ||| | || |    
T  34560831 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatgaattatg 34560930  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||||||||||||||| ||| |||||| |||||    
T  34560931 gtcttaagaacactcttaattccgaagggacagaaa 34560966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 1151039 - 1150953
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||| |||||||| |||| ||||||  ||||| ||||| ||||||||||| |||||| |||||||| | || |||||| ||||||||    
T  1151039 tatgatcttaaaagtactctttattacgaaggtacataaattatcaaagggactatgctcttaagatcattcttaattccgaaggga 1150953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 16595700 - 16595610
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||||||| ||||||||||||| ||  ||||||||||||| || ||| | |||| ||||||||||||||| | || ||||||  |||||||    
T  16595700 ggactatgatcttaaaaatactcttatttctgaagggacaaattttacctaagggactatgttcttaagaccattcttaattctgaaggga 16595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 33462957 - 33462856
Alignment:
Q  124 gaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacaca 223  Q
    ||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||| | ||||||| |||||   ||||||||  |||||| ||||||    
T  33462957 gaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggaacagaaaaatgagataaagagaagaaagactcgtcaacaca 33462858  T
Q  224 ag 225  Q
    ||    
T  33462857 ag 33462856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 19102399 - 19102584
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaac-ttttttaatttcgaagggataatatac 138  Q
    |||| ||| |||||||| |||| ||||||  ||| |||||||||||||| |||| |||||||| |||||| | ||| |||||| |||| ||| | || ||    
T  19102399 ggacaatgatcttaaaagtactctttatttcgaatggacatatattatcgaagggactatgtt-ttaagaccatttcttaattccgaatggacattaaac 19102497  T
Q  139 cgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||| | ||||||  |||||||||  |||||||  ||  || ||| ||||||  ||||||  ||||||||  |||||| ||||||||    
T  19102498 cgaaaagggactatagtcttaagattactcttacttctgaaaggacagaaaagggagatgaagagaagaaagactcgtcaacacaag 19102584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 2820208 - 2820301
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaag 127  Q
    ||||| ||||| || ||||||||||| |||||||||  || |||| ||||||||  |||| ||||||  ||||||| | || ||||||||||||    
T  2820208 aaaaagggactttgatcttaaaaataatttttattccaaatggacgtatattattgaagggactatgcacttaagaccattcttaatttcgaag 2820301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 8029944 - 8029851
Alignment:
Q  116 ttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaag-aaaaaagagatggggagaagaa 208  Q
    |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| | | ||||||  | ||||||||||||  ||||||||    
T  8029944 ttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaatttcgaagggacggaaaaaaagagatgaagagaagaa 8029851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 47244637 - 47244746
Alignment:
Q  116 ttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcg 215  Q
    |||||| |||||||| | || |||||| | | ||||  ||||||||||||||||||| | | |||||| ||||||| ||||||  | | ||||| |||||    
T  47244637 ttaattccgaagggacattaaaccgaaaaggaactatagtcttaagaacactcttaatttcgaagggacagaaaaatgagatgaagtggagaatgactcg 47244736  T
Q  216 ttaacacaag 225  Q
    | ||||||||    
T  47244737 tcaacacaag 47244746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 48276238 - 48276149
Alignment:
Q  137 accgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||| | ||||||  ||||||||||||||||||| ||| ||||||  ||||||| ||||||  ||||||||  |||||| ||||||||    
T  48276238 accgaaaagggactatagtcttaagaacactcttaattccgaagggacggaaaaaaggagatgaagagaagaaagactcgtcaacacaag 48276149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 3309587 - 3309647
Alignment:
Q  49 tcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaaga 109  Q
    ||||||||||||| |||||| |||||| ||||| |||||| |||| |||||| ||| ||||    
T  3309587 tcttaaaaatactatttattatgaaggaacataaattatcgaagggactatgatctgaaga 3309647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 266
Target Start/End: Complemental strand, 148074 - 147840
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||| |||||||| |||||||| || | ||||||||||||||| ||| |||||| || | |||||||| |||||| |||| |||||| ||| |||| |    
T  148074 caaaaagggactatgatcttaaaagtattctttattctgaagggagatacattatcgaatggactatgtttttaagatctttcttaattccgatgggaca 147975  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaagccggag 231  Q
     |||| |||| | ||||||||||||||||||||||||||  | | ||||||||||||||| |||||| ||||||||||| ||||| |||||||||  |||    
T  147974 ttatatcgaatagggactaaggtcttaagaacactcttattttcgaagggaaagaaaaaaggagatgaggagaagaatatctcgtcaacacaagctagag 147875  T
Q  232 ggataaaagggaaagtgttctcgacaattcaatag 266  Q
    ||  || ||  |||| |||||||||||||||||||    
T  147874 ggggaagagataaagagttctcgacaattcaatag 147840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 164033 - 163986
Alignment:
Q  126 agggataatataccgaacatggactaaggtcttaagaacactcttaaa 173  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  164033 agggacaatataccgaacagggactatggtcttaagaacactcttaaa 163986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 24672994 - 24672782
Alignment:
Q  46 tggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacat 145  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| ||| |||| ||||||  ||||||| | ||||||||| |     
T  24672994 tggtcttaaaaatactctttattctgaagggacatatattatcgaatgaactatgttctttagacctttcttaattctgaagggacattataccgaatag 24672895  T
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaa 245  Q
     || ||||| |||||||||||| |||| ||| ||||||   |||| ||||| | ||||||||||||||| |||||||||||  |||||| || || ||||    
T  24672894 agagtaaggccttaagaacacttttaattccgaagggactaaaaatagagacgaggagaagaataactcattaacacaagctagagggagaagagagaaa 24672795  T
Q  246 gtgttctcgacaa 258  Q
      |||||||||||    
T  24672794 tagttctcgacaa 24672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 264
Target Start/End: Original strand, 26779531 - 26779760
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| |||||||||||  ||||||||||| ||| || |||  |||||||| |||| |  ||| |||||| |||||||| | |    
T  26779531 aaaagggactatgatcttaaaagtactttttatttcgaagggacatacattgtcgaagagactatgtttttaaaacatttcttaattccgaagggacatt 26779630  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    |||  ||| | ||||||||||||||||||||||||||  || ||||||  ||||||| |||||| ||||||||||||||||| ||||||||||||| |||    
T  26779631 atagtgaatagggactaaggtcttaagaacactcttatttctaaaggggcagaaaaatgagatgaggagaagaataactcgtcaacacaagccggatgga 26779730  T
Q  235 taaaagggaaagtgttctcgacaattcaat 264  Q
     || || ||||| ||| ||||||| |||||    
T  26779731 gaagagagaaagagttatcgacaactcaat 26779760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 15951228 - 15951078
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||||| | |||| | || |||||| |||||||| | || |||    
T  15951228 ggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgttttaaagaccattcttaattccgaagggacattaaacc 15951129  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaa 190  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| ||||||    
T  15951128 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaa 15951078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 44925597 - 44925413
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| ||||  ||||||| |||||| | || |||||| |||||||| | |  |||    
T  44925597 ggactatgatcttaaaagtactatttattctgaagggacatatattatcgaaggggctatgtt-ttaagaccattcttaattccgaagggacattgaacc 44925499  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |||||||| |||||||||||||||||||| ||| |||||| ||||||| ||||||  ||||| ||  |||||| ||||||||    
T  44925498 gaaaatggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagagaataaagactcgtcaacacaag 44925413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 38181941 - 38181734
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| |||||||| ||||||   |||| ||||||| |||||||| ||||||||| |||  |||||||| |||||| | ||||||    
T  38181941 ggacattattattccaaaaaaggactatgatcttaatggtactctttattccgaagggacttatattatcgaagagactatgtttttaagaccattttta 38181842  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtt 217  Q
    ||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  ||||||     
T  38181841 attccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtc 38181742  T
Q  218 aacacaag 225  Q
    ||||||||    
T  38181741 aacacaag 38181734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 19167058 - 19167251
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||| |||||||| |||||| | |||| ||||||| |||||||| ||||||||| || |||||||||| | |||| | || |||||| |||||||  |    
T  19167058 caaaaagggactatgatcttaatagtactctttattccgaagggacttatattatcgaatgaactatgttttaaagaccattcttaattccgaagggtca 19167157  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
     || |||||| | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  19167158 ttaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 19167251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 266
Target Start/End: Complemental strand, 22714675 - 22714443
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||| ||| |||| |||||||| |||| ||||| | ||||| ||||| |||||| || | ||||||||||||||| ||||  || || | |||||| |    
T  22714675 caaaaagggagtatgatcttaaaagtactctttatcccgaaggaacatacattatcgaatggactatgttcttaagacctttactacttccaaagggaca 22714576  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
     ||||||||| | |||||||   ||||| ||||||||||| | | ||| ||| |||| | |||||| ||||||||||||||||||||||||||| |||||    
T  22714575 ttataccgaatagggactaattccttaaaaacactcttaatttcgaagtgaaggaaacaggagatgaggagaagaataactcgttaacacaagctggagg 22714476  T
Q  233 gataaaagggaaagtgttctcgacaattcaatag 266  Q
    || || |  ||||| ||||||||||| |||||||    
T  22714475 ga-aataacgaaagagttctcgacaactcaatag 22714443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 1910638 - 1910446
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataa 133  Q
    ||||| |||||||| |||||| | |||| ||||||  |||||||| ||||||||| || | |||||||| |||||| | || ||||||  ||||||| |     
T  1910638 aaaaagggactatgatcttaatagtactctttatttcgaagggacttatattatcgaatggactatgtttttaagaccattcttaattatgaagggacat 1910539  T
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    || |||||| | |||||| |||||||||||||||||||| |||||||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  1910538 taaaccgaaaagggactatggtcttaagaacactcttaattccaaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 1910446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 18876070 - 18875880
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| | |||| ||||||| |||||||| |||||||||  ||  |||||||| |||||| | || ||||||||||||||| | |    
T  18876070 aaaagggactatgatcttaatattactctttattccgaagggacttatattatcggagtgactatgtttttaagaccattcttaatttcgaagggacatt 18875971  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||||| | |||| | |||||||||||||||||||| | | |||||| ||||||| ||||||  ||||||||  | |||| ||||||||    
T  18875970 aaaccgaaaagggacaatggtcttaagaacactcttaatttcgaagggacagaaaaaggagatgaagagaagaaagattcgtcaacacaag 18875880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 266
Target Start/End: Original strand, 7002064 - 7002297
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataa 133  Q
    ||||| |||||||| ||||||||||| |||||||||  |||||||||| ||||||||||| ||||||  ||||||| | || || ||| |||||| |       
T  7002064 aaaaaaggactatgatcttaaaaatattttttattccaaagggacataaattatcaaagggactatgcccttaagatcattcttgattccgaaggaacgt 7002163  T
Q  134 tataccg-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
    |||| || || | | |||| |||||| |||||||| | || ||  |||| | ||||||| |||||| |||| |||||||| |||||||| |||| |||||    
T  7002164 tatatcgaaaaaagaactatggtctttagaacactatcaattctgaaggtacagaaaaaggagatgaggagtagaataacacgttaacataagctggagg 7002263  T
Q  233 gataaaagggaaagtgttctcgacaattcaatag 266  Q
    || || || ||||| ||||||||||| |||||||    
T  7002264 gagaacagagaaagagttctcgacaactcaatag 7002297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 134 - 266
Target Start/End: Original strand, 2966144 - 2966276
Alignment:
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggg 233  Q
    ||||||||||| ||||||||||||||||||||||||||  ||| | |||| | |||||  |||||  |||||||||||||||| ||||||||| ||||||    
T  2966144 tataccgaacagggactaaggtcttaagaacactcttatttcctatgggacaaaaaaagaagatgaagagaagaataactcgtcaacacaagctggaggg 2966243  T
Q  234 ataaaagggaaagtgttctcgacaattcaatag 266  Q
    | || || |||||  |||||||||||| |||||    
T  2966244 agaagagagaaagaattctcgacaatttaatag 2966276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 17020762 - 17020955
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||| |||| ||| |||||| | |||| |||||| ||||||| | ||||||||| |||| |||||||| |||||| | || |||||| | |||||| |    
T  17020762 caaaaagggacaatgatcttaatagtactctttattttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggaca 17020861  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
     || |||||  | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  | |||| ||||||||    
T  17020862 ttaaaccgagaaaggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagaatcgtcaacacaag 17020955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 17551199 - 17551392
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    |||||| |||| ||| |||||| | |||| |||||| ||||||| | ||||||||| |||| |||||||| |||||| | || |||||| | |||||| |    
T  17551199 caaaaagggacaatgatcttaatagtactctttattttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggaca 17551298  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
     || |||||  | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  | |||| ||||||||    
T  17551299 ttaaaccgagaaaggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagaatcgtcaacacaag 17551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 1807868 - 1808050
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| || ||||| |||||| | || |||||| |||| ||| | || |||    
T  1807868 ggactatgatcttaaaagtaatctttattctgaagggacat---ttatcgaagggacaatgtttttaagaccattcttaattccgaatggacattaaacc 1807964  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||| ||| |||| | ||||||| ||||||   |||||||  |||||| ||||||||    
T  1807965 gaaaagtgactatggtcttaagaacactcttaattccgaaggaacagaaaaaggagatgaatagaagaaagactcgtcaacacaag 1808050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 31449521 - 31449415
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| |||||||| | || |||||| |||||||| | || |||||| |||||||| |||||||||||||||||||| ||| |||||    
T  31449521 attatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaatggactatggtcttaagaacactcttaattccgaaggg 31449422  T
Q  183 aaagaaa 189  Q
    | |||||    
T  31449421 acagaaa 31449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 23548297 - 23548065
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||  |||||||| || | ||||||  |||| |||||| |||||| || | |||||||| |||||| |||| |||| | | ||| || | |    
T  23548297 aaaagggactataatcttaaaagtattctttattacgaagcgacatacattatcgaatgtactatgtttttaagatctttcttaactccaaagagacatt 23548198  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaagccggaggg 233  Q
    |||||||| |  ||| |||||||||||||||||||||  | | |||||| |||||||| ||||||  |||||||||| ||||| ||||||||  |||| |    
T  23548197 ataccgaataacgacaaaggtcttaagaacactcttattttcgaagggatagaaaaaaggagatgaagagaagaatagctcgtcaacacaagttggagag 23548098  T
Q  234 ataaaagggaaagtgttctcgacaattcaatag 266  Q
    | || |  ||||| ||||||||| | |||||||    
T  23548097 agaagatagaaagagttctcgaccactcaatag 23548065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 15875378 - 15875184
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatat-tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataa 133  Q
    |||| |||||||| |||||||| || | ||||||||||||||||||| |  ||||||||| |||||  |||||| | | ||||||||| |||||||| |     
T  15875378 aaaagggactatgatcttaaaa-tattatttattctgaagggacataaaaatatcaaagggactatactcttaataccatttttaattccgaagggagat 15875280  T
Q  134 tataccgaacat-ggactaaggtcttaa---gaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||||||||| |  ||||||  |||||||   |||||||||||| ||| |||||| |||||||  |||||  ||||||||  |||||| ||||||||    
T  15875279 tataccgaaaaaaggactactgtcttaattagaacactcttaattccgaagggacagaaaaagaagatgaagagaagaaagactcgtcaacacaag 15875184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 17026390 - 17026531
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||||| ||| ||||||    
T  17026390 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaaggga 17026489  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  17026490 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 17026531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 17556882 - 17557023
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||||| ||| ||||||    
T  17556882 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaaggga 17556981  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  17556982 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 17557023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 33417054 - 33417134
Alignment:
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  33417054 ggactatggtcttaagaacactcttaattccaaagggacagaaaaaatgagatgaagagaagaaagactcgtcaacacaag 33417134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 37772114 - 37772250
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |    
T  37772114 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatggactatg 37772213  T
Q  154 gtcttaa-gaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||| |||||||||||| |||||||||| |||||    
T  37772214 gtcttaaagaacactcttaattccaaagggacagaaa 37772250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 2966061 - 2966106
Alignment:
Q  33 caaaaatggactatggtcttaaaaatactttttattctgaagggac 78  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  2966061 caaaaaaggactatgatcttaaaaatactttttattctgaagggac 2966106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 20072472 - 20072557
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaag 127  Q
    ||||||||||||| |||||| || ||| ||||||| |||| ||| ||||||| |||||| ||||||||   |||||||||||||||    
T  20072472 actatggtcttaagaatactcttaattatgaaggggcataaattgtcaaagggactatgctcttaagactatttttaatttcgaag 20072557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 36684001 - 36684187
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||||| |||| || | |||||||| |||||| |  | |||||| |||||||| | || |||    
T  36684001 ggactatgatcttaaaagtactctttattctgaagggacatataatatcgaatggactatgtt-ttaagaccactcttaattccgaagggacattaaacc 36684099  T
Q  140 gaacatgg---actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaa 224  Q
    ||| |  |   || | ||||||||||||| |||||| ||| |||||| |||||||  |||||  ||||| ||  |||||| |||||||    
T  36684100 gaaaagagaccaccatggtcttaagaacattcttaattccgaagggacagaaaaagaagatgaagagaaaaaagactcgtcaacacaa 36684187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 18260252 - 18260326
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaag 108  Q
    |||||||||||||| |||||||| || ||||||||| ||| |||||||  ||||| || |||||||||| |||||    
T  18260252 aaaaatggactatgatcttaaaagtattttttattccgaaaggacataagttatcgaatgaactatgtttttaag 18260326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 4237995 - 4237891
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaa 184  Q
    |||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| || |||     
T  4237995 tatcgaagggactatgctgttaagatcattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaatggac 4237896  T
Q  185 agaaa 189  Q
    |||||    
T  4237895 agaaa 4237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 4242734 - 4242630
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaa 184  Q
    |||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| || |||     
T  4242734 tatcgaagggactatgctgttaagatcattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaatggac 4242635  T
Q  185 agaaa 189  Q
    |||||    
T  4242634 agaaa 4242630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 19954636 - 19954788
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggg--ataatata 137  Q
    |||||||| |||||| |||||| ||  ||||||||||||| || ||| | |||| ||||||||||||||| | || || ||| |||||||  ||  || |    
T  19954636 ggactatgctcttaagaatactcttatttctgaagggacaaattttaccgaagggactatgttcttaagaccattctttattccgaagggacattttaaa 19954735  T
Q  138 ccgaacatggactaaggtcttaagaacactc-ttaaatccaaagggaaagaaaaa 191  Q
    ||||| |  ||||| || ||||||||||||| |||||||| |||||| |||||||    
T  19954736 ccgaaga--gactatggccttaagaacactctttaaatccgaagggagagaaaaa 19954788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 33416969 - 33417056
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||||||| |||||||| |||| |||||||||| | |||||   ||||| |||| |||||||| |||||| | || |||||||||||||||    
T  33416969 ggactatgatcttaaaagtactctttattctgaggagacat---ttatcgaagggactatgtttttaagaccattcttaatttcgaaggga 33417056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 8331013 - 8330914
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | || ||| ||||||| |||||||| ||| |  |||||||| ||||||||||| |||||||| ||| || ||| |||||    
T  8331013 aagggactatgctcttaagaccattcttattttcgaaaggataataaaccaacgatggactatggtcttaagaatactcttaattccgaatggacagaaa 8330914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 40125466 - 40125387
Alignment:
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||||| |||||||||||||||||||| ||| || ||| ||||||| ||||||  ||||||||  ||| || ||||||||    
T  40125466 ggactatggtcttaagaacactcttaattccgaacggacagaaaaaggagatgaagagaagaaagacttgtcaacacaag 40125387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 4544029 - 4543955
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaaga 109  Q
    |||| |||||||| |||||| |||||||||  ||||||||||||  || ||| | |||| |||||||||||||||    
T  4544029 aaaagggactatgatcttaagaatacttttatttctgaagggacgaattttaccgaagggactatgttcttaaga 4543955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 14035850 - 14035940
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||||||| ||||||||||||| ||||||  |||| |||||| || || |||||   |||| |||||||||  || |||||||||||||||    
T  14035850 ggactatgatcttaaaaatactctttatttcgaagagacataaatgatgaaaggggttatgctcttaagaagattcttaatttcgaaggga 14035940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 34818351 - 34818257
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||||| |||||||| | || ||| ||||||| |||||||| || ||  ||| |||| |||||||||||||||||||| | | |||||| |||||    
T  34818351 actatgctcttaagaccattcttattttcgaaaggataataaactgaggatgaactatggtcttaagaacactcttaatttcgaagggacagaaa 34818257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 19950178 - 19950251
Alignment:
Q  36 aaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaaga 109  Q
    |||||||||||| |||||| |||||| ||  |||||| |||||| || ||| | |||| |||||||||||||||    
T  19950178 aaatggactatgatcttaagaatactcttatttctgatgggacaaattttaccgaagggactatgttcttaaga 19950251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 27415921 - 27415978
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaag 92  Q
    ||||||||||||| |||||||| |||| ||| ||||||||| ||||| || |||||||    
T  27415921 aaaatggactatgatcttaaaagtactatttgttctgaaggaacataaatgatcaaag 27415978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 17793890 - 17793926
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattct 70  Q
    |||||||||||||| |||||||| |||||||||||||    
T  17793890 aaaaatggactatgatcttaaaagtactttttattct 17793926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 28863956 - 28863996
Alignment:
Q  194 agatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  28863956 agatgaggagaagaatagctcgttaacacaagctggaggga 28863996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 16649310 - 16649126
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || ||||||||||||||| | || |||    
T  16649310 ggactatgatcttaaaaatactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaacc 16649212  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| | ||||| ||||||   |||||||  |||||| ||||||||    
T  16649211 gaaaagggactatggtcttaagaacactcttaattccgaagggacaaaaaaaggagatgaatagaagaaagactcgtcaacacaag 16649126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 26927395 - 26927247
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||  ||||| | || |||||| | |||||||| || |||    
T  26927395 ggactatgatcttaaaaatactctttattctgaagggacatatattatcgaagggactatgtt-gtaagaccattcttaattccaaagggatattaaacc 26927297  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||| | |||||||| |||||    
T  26927296 gaaaagggactatggtcttaagaacactcttaatttcaaagggacagaaa 26927247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 39200443 - 39200253
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||| ||| |||||| | |||| ||||||  |||||||| ||||||||| |||| |||||||| |||||| | || |||||| |||||||| | |    
T  39200443 aaaagggacaatgatcttaatagtactctttatttcgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacatt 39200344  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | ||| || | |||||| ||| |||||||||||||||| |||||||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  39200343 aaaccaaaaagggactatggtattaagaacactcttaattccaaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 39200253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 19798698 - 19798492
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| |||||||| |||| | | |||| ||||||| |||||||| ||||||||| |||| | |||||| | |||| | || |||    
T  19798698 ggacattattattccaaaaagggactatgatcttcatagtactctttattccgaagggacttatattatcgaagggattatgttttgaagaccattctta 19798599  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgtta 218  Q
    |||||||||||| | || | | || | |||||| |||||||||||||||||||| | | |||||| ||||||| ||||||  ||||||||  |||||| |    
T  19798598 atttcgaagggacattaaatcaaaaagggactatggtcttaagaacactcttaattacgaagggacagaaaaaggagatgaagagaagaaagactcgtca 19798499  T
Q  219 acacaag 225  Q
    |||||||    
T  19798498 acacaag 19798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 47450902 - 47450716
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||||||| |||  |||||||| |||||| | || ||||||| ||||||  | || |||    
T  47450902 ggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagagactatgtttttaagaccattcttaattttgaaggggcattaaacc 47450803  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| |||||||| ||||||||||| ||| |||||| | |||||| | ||||  ||||||||  |||||| ||||||||    
T  47450802 gaaaagggactatggtcttaaaaacactcttaattccgaagggacataaaaaaggtgatgaagagaagaaagactcgtcaacacaag 47450716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 258
Target Start/End: Original strand, 16036042 - 16036258
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccg 140  Q
    ||||||| |||||||| |||| ||||||  ||||||||||| ||| || || | |||||||| | |||| |||| |||||| |||||  | | ||||| |    
T  16036042 gactatgatcttaaaagtactctttatttcgaagggacatacattctcgaatggactatgttttcaagacctttattaattgcgaaga-acattatactg 16036140  T
Q  141 aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaag 240  Q
    || | ||||||||||||||||||||||||||  ||  || ||| ||||||| |||  | ||||||||||| ||||| ||||||||| ||||||| || ||    
T  16036141 aatagggactaaggtcttaagaacactcttatttcagaaaggacagaaaaaggagtcgaggagaagaatagctcgtcaacacaagctggagggagaagag 16036240  T
Q  241 ggaaagtgttctcgacaa 258  Q
     ||||| |||||||||||    
T  16036241 agaaagagttctcgacaa 16036258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 25844174 - 25844358
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||| ||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  25844174 ggactatgatcttaaaagtactctttatcctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 25844270  T
Q  140 gaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    ||| | || |||| |||||||||||||||||||||| | |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  25844271 gaaaaagggactatggtcttaagaacactcttaaattcgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 25844358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 12260495 - 12260638
Alignment:
Q  124 gaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga-aagaaaaaagagatggggagaagaataactcgttaacac 222  Q
    ||||||| | ||||||||| |||||||| |||||||| ||||||||||| ||||||||||   ||| || ||||||  ||||||||||||||||||||||    
T  12260495 gaagggacattataccgaaaatggactatggtcttaaaaacactcttaattccaaagggatgggaataaggagatgaagagaagaataactcgttaacac 12260594  T
Q  223 aagccggagggataaaagggaaagtgttctcgacaattcaatag 266  Q
    |||| | ||||| || || ||||| |||||| |||| |||||||    
T  12260595 aagctgaagggagaagagagaaagagttctcaacaactcaatag 12260638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 51041185 - 51041037
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||| |||| |||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  51041185 ggactatgatcttaaaagtactctttattctaaaggaacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaacc 51041087  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||| |||||||| ||| |||||| |||||    
T  51041086 gaaaagggactatggtcttaagaatactcttaattccgaagggacagaaa 51041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 10140516 - 10140662
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||| |||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  10140516 ggactatgatcttaaaagtactctttattatgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 10140612  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||  ||| |||||| |||||    
T  10140613 gaaaagggactatggtcttaagaacactcttatttccgaagggacagaaa 10140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 38621120 - 38621311
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| | || | ||||||| |||||||| |||||||||||||| |||||||| |||||| | || ||||||  ||||||| | |    
T  38621120 aaaagggactatgatcttaatagtaatctttattccgaagggacttatattatcaaagggactatgtttttaagagcattattaattctgaagggacatt 38621219  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga-aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | | |||| | |||||| | |||||||||||||||||| ||  |||| | || ||||| ||||||  |||||||| ||||||| ||||||||    
T  38621220 aaaacgaaaagggactatgatcttaagaacactcttaattcttaaggaacaaaaaaaaggagatgaagagaagaaaaactcgtcaacacaag 38621311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 10135748 - 10135894
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||| |||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  10135748 ggactatgatcttaaaagtactctttattatgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 10135844  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||| |||||||  ||| |||||| |||||    
T  10135845 gaaaagggactatggtcttaagaatactcttatttccgaagggacagaaa 10135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 33300922 - 33300768
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| |||||||| |||||| | || ||| || |||||||| | || |||    
T  33300922 ggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccgttcttagttccgaagggacattaaacc 33300823  T
Q  140 gaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaag 193  Q
     || | || |||| |||| |||||||||| |||| ||| |||| | |||||||||    
T  33300822 aaaaaaggaactatggtcctaagaacacttttaattccgaaggaacagaaaaaag 33300768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 3094527 - 3094633
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| | |||||| | || ||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  3094527 attatcgaagggactatgctgttaagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 3094626  T
Q  183 aaagaaa 189  Q
    | |||||    
T  3094627 acagaaa 3094633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 39588056 - 39587850
Alignment:
Q  27 tcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcg-a 125  Q
    ||||| |||| | |||||||| |||||||| || | ||||||| || ||||||||||||||| |||| ||| |||| |||||| | |||||||||||  |    
T  39588056 tcattccaaatagggactatgatcttaaaagtattctttattccgatgggacatatattatcgaagggactgtgtttttaagaccatttttaatttctta 39587957  T
Q  126 agggataat------ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtta 218  Q
    |   |||||      | |||| | | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| |    
T  39587956 attcataatggaattaaaccggaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtca 39587857  T
Q  219 acacaag 225  Q
    |||||||    
T  39587856 acacaag 39587850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 221
Target Start/End: Complemental strand, 28434306 - 28434129
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaac 143  Q
    |||| ||||| ||||| | ||||||  |||| ||||||||||||| || | |||||| | |||||| | || ||||||||||||||| | |||||| ||     
T  28434306 tatgatcttacaaatattctttatttcgaagagacatatattatcgaatggactatgcttttaagaccattcttaatttcgaagggagattatacc-aaa 28434208  T
Q  144 atggactaaggtcttaagaacactcttaaatccaaagggaaagaaa-aaagagatggggagaagaataactcgttaaca 221  Q
    |  ||||| | ||||||||| |||||||| ||| ||||||  |||| || |||||  ||||||||||| ||||||||||    
T  28434207 aaagactatgttcttaagaaaactcttaattccgaagggacggaaataaggagataaggagaagaatagctcgttaaca 28434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 40166403 - 40166495
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagg 128  Q
    |||| |||||||| |||||| | ||||||| |||| |||||||| |||||||||||||| |||||||| |||||| | || |||||| ||||||    
T  40166403 aaaagggactatgatcttaatagtactttt-attccgaagggacttatattatcaaagggactatgtttttaagaccattcttaattccgaagg 40166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 7882509 - 7882589
Alignment:
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||| |||||||||||||||||||| |||||||||| | |||||| ||||||  ||||||||  |||||| ||||||||    
T  7882509 ggactatggtcttaagaacactcttaattccaaagggacataaaaaaggagatgaagagaagaaagactcgtcaacacaag 7882589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 40233063 - 40232913
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | |||||||| ||| |||||| |  ||  |||| |||||| |||||||| | || ||| || |||| |||||||| | |    
T  40233063 ggactatgatcttaaaa-tattatttattctaaagagacataaacaattgaagggactatgctcttaagatcattattatttccgaaaggataataaatc 40232965  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaa 191  Q
    ||  |||||||| | |||||||||||||||||| ||| |||||| |||||||    
T  40232964 gacgatggactatgatcttaagaacactcttaattccgaagggacagaaaaa 40232913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 41097644 - 41097509
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || | || |||||||| |||||  ||||| || |    
T  41097644 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccaaaaggataataaaccgacgatggattatg 41097545  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||||||||||||||| ||| |||||| |||||    
T  41097544 gtcttaagaacactcttaattccgaagggacagaaa 41097509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 16833937 - 16834078
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaa 184  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | || | || | | |||||| |||||||||||||||||||| ||| ||||||     
T  16833937 tatcgaagggactatgaacttaagaccattcttaattccgaagggacattaaatcggaaagggactatggtcttaagaacactcttaattccgaagggac 16834036  T
Q  185 agaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||||| ||||||  ||||||||  |||| | ||||||||    
T  16834037 agaaaaaaggagatgaagagaagaaagactcatcaacacaag 16834078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 8267484 - 8267402
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaa 172  Q
    |||| |||||| |||||||| | || ||| ||||||| ||| |||| |||||| | |||||| ||||||||||||| ||||||    
T  8267484 aagggactatgctcttaagaccattcttattttcgaaaggacaataaaccgaataaggactatggtcttaagaacattcttaa 8267402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 9328148 - 9328099
Alignment:
Q  88 caaaggaactatgttcttaagaacttttttaatttcgaagggataatata 137  Q
    |||||| ||||||||||||||| | || ||||||||||||||| ||||||    
T  9328148 caaagggactatgttcttaagaccattcttaatttcgaagggacaatata 9328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 10388035 - 10387806
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||  |||||||| ||||||||||||||||||| |||| |||||| | | ||||||||| ||||||  ||| |||||| |||||||| | |    
T  10388035 aaaagggactatattcttaaaagtactttttattctgaaggggcatacattatcgacgaaactatgtttttaagacttttcttaattccgaagggacatt 10387936  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    |||||||| | ||||||||||||||| |||||| |||  ||| |||||  | |||||| ||||| ||||||||||||||||  ||||||||| |||||||    
T  10387935 ataccgaataaggactaaggtcttaaaaacactattatttccgaaggg--acaaaaaaaagatgaggagaagaataactcgacaacacaagctggaggga 10387838  T
Q  235 taaaagggaaagtgttctcgacaattcaatag 266  Q
     || || ||||| ||| ||||||| |||||||    
T  10387837 gaagagagaaagagttatcgacaactcaatag 10387806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 266
Target Start/End: Complemental strand, 26286818 - 26286593
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| ||||||||||| | ||||||| |||||||  ||||||||| || ||| |||| | |||||| | || |||||| |||||||| | ||||||||    
T  26286818 actatgatcttaaaaatattctttattccgaagggatgtatattatcgaatgaaatatgcttttaagaccattcttaattccgaagggacattataccga 26286719  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaaga-gatggggagaagaataactcgttaacacaagccggagggataaaag 240  Q
    | ||| |||  ||||||||||| ||| |||  ||| |||||| ||||| |||| |||| ||||||||||||||||| ||||||||| ||||||| || ||    
T  26286718 aaatgaactgtggtcttaagaaaacttttagttccgaagggacagaaataagaagatgaggagaagaataactcgtcaacacaagctggagggagaagag 26286619  T
Q  241 ggaaagtgttctcgacaattcaatag 266  Q
     ||||| ||||||||||| |||||||    
T  26286618 agaaagagttctcgacaactcaatag 26286593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 253
Target Start/End: Complemental strand, 10532422 - 10532317
Alignment:
Q  148 actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagt 247  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||| || || |||||     
T  10532422 actaaggtcttaagaacactcttaatttcaaagggacagaaaaaagagatgaagagaagaataactcattaacacaagccggagggagaagagagaaaga 10532323  T
Q  248 gttctc 253  Q
    ||||||    
T  10532322 gttctc 10532317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 42626260 - 42626080
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaac 143  Q
    |||| |||||||| |||| |||||||||||||||||||||||||  |||| |||||||| |||||| | || |||||| || ||||| | || ||||||     
T  42626260 tatgatcttaaaagtactctttattctgaagggacatatattattgaagggactatgtt-ttaagaccattcttaattccggagggacattaaaccgaaa 42626162  T
Q  144 atggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||||| |||||||||||||||||| | ||| |||||| | ||||| ||||||  ||||||||  |||||| ||||||||    
T  42626161 agggactatggtcttaagaacactcttgattccgaagggacataaaaaggagatgaagagaagaaagactcgtcaacacaag 42626080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 8268713 - 8268899
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||||||| || | |||||||| |||||| | || |||||| |||||||| | || |||    
T  8268713 ggactatgatcttaaaagtactctttattccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaacc 8268812  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | || | ||||||  |||||||||||||| |||| | | |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  8268813 gaaaaagggactatcgtcttaagaacactgttaatttcgaagggatagaaaaatgagatgaagagaagaaagactcgtcaacacaag 8268899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 26341628 - 26341776
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||||||||||| ||| ||||| || |||||| | || |||||| |||||||| | || |||    
T  26341628 ggactatgatcttaaaagtattctttattctgaagggacatatattatcacagggactatatt-ttaagaccattcttaattccgaagggacattaaacc 26341726  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | ||| || |||||||||||||||||||| ||| |||||| |||||    
T  26341727 gaaaagggattatggtcttaagaacactcttaattccgaagggacagaaa 26341776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 266
Target Start/End: Complemental strand, 10392716 - 10392544
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg--aaagaaaaaa 192  Q
    |||||||| | ||||  ||||||||||||||||||| | ||||||||| | ||| |||||||||||||||| | |||  | | |||||  ||| ||||||    
T  10392716 actatgttttcaagacattttttaatttcgaagggaca-tataccgaatagggattaaggtcttaagaacatttttattttcgaagggacaaaaaaaaaa 10392618  T
Q  193 gagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgacaattcaatag 266  Q
    |||||| ||||||||||| ||||| ||||||||| ||||||| || || ||||| ||||| ||||| |||||||    
T  10392617 gagatgaggagaagaatagctcgtcaacacaagctggagggagaagagagaaagagttctagacaactcaatag 10392544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 10499681 - 10499615
Alignment:
Q  160 agaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagc 226  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  10499681 agaacactcttaattccaaagggacagaaaaaagagatgaggagaagaataactcgttaacacaagc 10499615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 10504710 - 10504644
Alignment:
Q  160 agaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagc 226  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  10504710 agaacactcttaattccaaagggacagaaaaaagagatgaggagaagaataactcgttaacacaagc 10504644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 90 - 258
Target Start/End: Original strand, 9008602 - 9008772
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaa--ggtcttaagaacactcttaaatccaaagggaaaga 187  Q
    |||| |||||| |||||||| | || || ||||||||||||  |||||| ||| | ||||||   ||||||||||| |||||||| ||| ||||||  ||    
T  9008602 aagggactatgctcttaagaccattcttgatttcgaagggacgatatactgaaaaaggactatatggtcttaagaatactcttaattccgaagggatgga 9008701  T
Q  188 aaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgacaa 258  Q
    ||||| |||||  |||||||||| |||||||||||| || ||||||| || | |||||| |||||||||||    
T  9008702 aaaaaaagatgaagagaagaatagctcgttaacacaggctggagggagaagaaggaaagagttctcgacaa 9008772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 234
Target Start/End: Original strand, 21671612 - 21671808
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||| ||| |||||||| |||| ||||||| |||||||||||  ||    |||| | |||||| |||||| |||| |||||| | || ||| | |    
T  21671612 aaaagggaccatgatcttaaaagtactctttattccgaagggacatacttttg--aagggattatgtt-ttaagatctttcttaattccaaatggacatt 21671708  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    |||| ||| | |||||||||||||| ||| |||||||| ||| |||||||||||||| |||| | ||||||||||| ||||  ||||||||| |||||||    
T  21671709 atactgaatagggactaaggtcttatgaaaactcttaattccgaagggaaagaaaaatgagacgaggagaagaatagctcgccaacacaagctggaggga 21671808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 10499789 - 10499688
Alignment:
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaaga-aaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
    ||||||||| | ||| ||||||||||||||||||||||| || ||||||| ||| ||||| ||||| ||||||||||| || |||||||||||  |||||    
T  10499789 tataccgaatagggattaaggtcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaacacaagttggagg 10499690  T
Q  233 ga 234  Q
    ||    
T  10499689 ga 10499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 10504818 - 10504717
Alignment:
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaaga-aaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
    ||||||||| | ||| ||||||||||||||||||||||| || ||||||| ||| ||||| ||||| ||||||||||| || |||||||||||  |||||    
T  10504818 tataccgaatagggattaaggtcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaacacaagttggagg 10504719  T
Q  233 ga 234  Q
    ||    
T  10504718 ga 10504717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 266
Target Start/End: Original strand, 3046008 - 3046216
Alignment:
Q  60 ctttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttt-ttaatttcgaagggataatat-accgaacatggactaaggtct 157  Q
    |||||||||| ||||||||||| |||| | |||  |||||||| ||||||  |||| |||||||| |||||| | ||| || ||||| ||||||||||||    
T  3046008 ctttttattccgaagggacatacattaccgaagagactatgtttttaagacattttcttaatttcaaagggacattattacagaacaaggactaaggtct 3046107  T
Q  158 taagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgaca 257  Q
    || |||||||||||  | | ||| || ||||||| |||||| | |||||||||  || | ||||||||| | ||||| || || ||||| ||| ||| ||    
T  3046108 taggaacactcttattttcgaagcgacagaaaaaggagatgagaagaagaatagttcatcaacacaagctgaagggagaagagagaaagagttatcgcca 3046207  T
Q  258 attcaatag 266  Q
    | |||||||    
T  3046208 actcaatag 3046216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 224
Target Start/End: Original strand, 16372810 - 16373001
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatat-tatcaaaggaactatgttcttaagaacttttttaatttcgaagggata 132  Q
    ||||| |||||||| |||||||  || | ||||||| ||||||||||| |  |||| |||| ||||||||||||||| | || |||||| |||||||| |    
T  16372810 aaaaagggactatgatcttaaac-tattatttattccgaagggacataaaaatatcgaagggactatgttcttaagaccattcttaattccgaagggaca 16372908  T
Q  133 atataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaa 224  Q
     |||||| || |   || ||| |||||||||||||||||| ||  || ||| |||||||| ||||||  ||||||||||||| ||||||||||    
T  16372909 ttataccaaaaagaaaccaagatcttaagaacactcttaattctgaaaggacagaaaaaaggagatgaagagaagaataacttgttaacacaa 16373001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 4930643 - 4930772
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||| |||||| |||||   ||||| |||| |||||||| |||||| | || ||||||||||||||| | || |||    
T  4930643 ggactatgatcttaaaagtactctttatcctgaagagacat---ttatcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaacc 4930739  T
Q  140 g-aacatggactaaggtcttaagaacactctta 171  Q
    | || | |||||| |||||||||||||||||||    
T  4930740 gaaaaagggactatggtcttaagaacactctta 4930772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 12799842 - 12799990
Alignment:
Q  77 acatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatgg-actaaggtcttaagaacactcttaaatc 175  Q
    |||||||||||| || | |||||||| |||||| | || ||||||||||||||| | || |||||| | || |||| |||||||| ||||||||||| |     
T  12799842 acatatattatcgaatggactatgtt-ttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaataacactcttaattt 12799940  T
Q  176 caaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  12799941 cgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 12799990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 44422808 - 44422629
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||||   ||     |||||||||| ||| || | || |||||| |||||||| | || ||     
T  44422808 ggactatgatcttaaaagtactctttattctgaagggacatattgaat-----gaactatgtt-ttacgaccattcttaattccgaagggacattaaacg 44422715  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | | |||| |||||||||||||||||||| ||| |||||| ||||||| ||||||  || |||||  |||||| ||||||||    
T  44422714 gaaaaagaactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagaaaagaaagactcgtcaacacaag 44422629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 27256645 - 27256780
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |    
T  27256645 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatggactatg 27256744  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||||||||||||||| ||  |||||| |||||    
T  27256745 gtcttaagaacactcttaattctgaagggacagaaa 27256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 40865014 - 40864915
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  40865014 aagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 40864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 266
Target Start/End: Original strand, 3285030 - 3285146
Alignment:
Q  150 taaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgt 249  Q
    |||||||||||||||| | |||  | | || ||| | ||||| |||| |||||||||||||| |||| ||||||||| ||||||| || || ||||| ||    
T  3285030 taaggtcttaagaacatttttattttcgaatggacaaaaaaaggagacggggagaagaataattcgtcaacacaagctggagggagaagagagaaagagt 3285129  T
Q  250 tctcgacaattcaatag 266  Q
    |||| |||| |||||||    
T  3285130 tctccacaactcaatag 3285146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 30258499 - 30258706
Alignment:
Q  19 ggacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaactttttta 118  Q
    |||||| || ||| |||||| |||||||| |||||| | |||  || ||| ||||||||| ||||||||| |||| ||| |||| || | | | || |||    
T  30258499 ggacattattatttcaaaaagggactatgatcttaatagtacccttgattttgaagggacttatattatcgaagggactgtgttttttataccattctta 30258598  T
Q  119 atttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtt 217  Q
    ||| |||||||| | || ||| || | | || | ||||||||||| |||||||| | | |||||| |||||||| ||||||  ||||||||  ||||||     
T  30258599 attccgaagggacattaaacccaaaaggcacaatggtcttaagaagactcttaatttcgaagggacagaaaaaaggagatgaagagaagaaagactcgtc 30258698  T
Q  218 aacacaag 225  Q
    ||||||||    
T  30258699 aacacaag 30258706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 13313848 - 13313775
Alignment:
Q  153 ggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  13313848 ggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 13313775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 4580011 - 4580105
Alignment:
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga---aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||||||||| | ||| || |||||||||||||||||||| ||||||||||   || ||||| |||||||||||| |||  | |||| ||||||||    
T  4580011 tataccgaaaagggattatggtcttaagaacactcttaattccaaagggacataaaaaaaaggagatggggagaggaaagattcgtcaacacaag 4580105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 2595296 - 2595394
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa 192  Q
    |||||||| |||||| | || |||||| |||||||| | || |||||| | || |||| |||||||||||||||||||| | | |||||| ||||||||    
T  2595296 actatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactacggtcttaagaacactcttaatttcgaagggacagaaaaaa 2595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 13344087 - 13344002
Alignment:
Q  147 gactaaggtcttaagaacactcttaaatccaaagggaaag-aaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||||| |||||||||||||||||| | |||| ||| || |||||| |||||   ||||||||| ||| ||||||||||| |||||||    
T  13344087 gactaagatcttaagaacactcttaatttcaaaaggataggaaaaaaaagatg---agaagaatagctctttaacacaagctggaggga 13344002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 210
Target Start/End: Original strand, 23319346 - 23319507
Alignment:
Q  49 tcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagg-gataatataccgaacatgg 147  Q
    ||||||||||| ||||||||  ||| ||| |||||||||| |||  | ||| |||| |||| |||| |||||| | || | || | |||||| ||||  |    
T  23319346 tcttaaaaatattttttatttcgaatggaaatatattatcgaagagattatattctcaagacctttcttaattccaaatgagacattatacccaacagag 23319445  T
Q  148 actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaata 210  Q
    |||||||| |||||||||||||||| ||| || |||  || |||||||||  |||||||||||    
T  23319446 actaaggt-ttaagaacactcttaattccgaatggacggacaaaagagataaggagaagaata 23319507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 45748334 - 45748292
Alignment:
Q  49 tcttaaaaatactttttattctgaagggacatatattatcaaa 91  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||    
T  45748334 tcttaaaaatactctttattccgaagagacatatattatcaaa 45748292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 37248478 - 37248292
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  37248478 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtttttaagatcattcttaattctgaagggacattaaacc 37248379  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | || | |||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  37248378 gaaaaagggactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 37248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 26667694 - 26667842
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  26667694 ggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 26667792  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| |||||    
T  26667793 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 26667842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 26939291 - 26939439
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  26939291 ggactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 26939389  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| |||||    
T  26939390 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 26939439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 40148317 - 40148501
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  40148317 ggacaatgatcttaaaagtactttttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaacc 40148415  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| |||||||  |||||  ||||||||  |||||| ||||||||    
T  40148416 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaagaagatgaagagaagaaagactcgtcaacacaag 40148501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 23757494 - 23757263
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| |||| |||||||  |||||||||| |||||| |||| |||||||| |||||| ||||  ||||| ||||| || | |    
T  23757494 aaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacatt 23757395  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||||||   |||||||||||||||||| |||||||  ||| |||||  ||||||| || ||| ||||||||||| ||||| |||| ||||  ||||||    
T  23757394 ataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcagaaaaaggatatgaggagaagaatagctcgtcaacataagctagaggga 23757295  T
Q  235 taaaagggaaagtgttctcgacaattcaatag 266  Q
     || ||  |||| ||||||||||| |||||||    
T  23757294 gaagagaaaaagagttctcgacaactcaatag 23757263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 266
Target Start/End: Complemental strand, 23822950 - 23822719
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| |||| |||||||  |||||||||| |||||| |||| |||||||| |||||| ||||  ||||| ||||| || | |    
T  23822950 aaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattccgaagtgacatt 23822851  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||||||   |||||||||||||||||| |||||||  ||| |||||  ||||||| || ||| ||||||||||| ||||| |||| ||||  ||||||    
T  23822850 ataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcagaaaaaggatatgaggagaagaatagctcgtcaacataagctagaggga 23822751  T
Q  235 taaaagggaaagtgttctcgacaattcaatag 266  Q
     || ||  |||| ||||||||||| |||||||    
T  23822750 gaagagaaaaagagttctcgacaactcaatag 23822719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 9726429 - 9726245
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || |||    
T  9726429 ggactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattctgaagggacattaaacc 9726331  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| ||||||| ||||||  ||||||||  ||| || ||||||||    
T  9726330 gaaaagggactacggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagagaagaaagactagtcaacacaag 9726245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 29167647 - 29167499
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| || ||||| |||||| | || |||||| |||||||| | || |||    
T  29167647 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggacaatgtt-ttaagaccattcttaattccgaagggacattaaacc 29167549  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||| ||| |||||| |||||    
T  29167548 gaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 29167499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 234
Target Start/End: Complemental strand, 16115914 - 16115713
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataa 133  Q
    |||||||||||||| |||||||| |||| |||||||||||||||  ||||||||| || |||||||  ||||  || | || |||| ||| |||||| |     
T  16115914 aaaaatggactatgatcttaaaagtactctttattctgaagggatgtatattatcgaatgaactattctcttcggaccattcttaacttcaaagggacat 16115815  T
Q  134 tat-accgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
    ||| |||||| | ||| || |||||||||||||||||||| ||  || | | | ||||| |||||| |||||| |||||||||||||||||||| |||||    
T  16115814 tataaccgaaaagggattatggtcttaagaacactcttaattctgaaagaacaaaaaaaggagatgaggagaaaaataactcgttaacacaagctggagg 16115715  T
Q  233 ga 234  Q
    ||    
T  16115714 ga 16115713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 37549826 - 37549678
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| || | |||||||| | |||| | || |||||| |||||||| | || |||    
T  37549826 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaatggactatgtt-tcaagaccattcttaattccgaagggacattaaacc 37549728  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||  |||||||||| |||||    
T  37549727 gaaaagggactatggtcttaagaacactcttatttccaaagggacagaaa 37549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 36429133 - 36429280
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| | |  |||||||| |||||| | || |||||| |||||||| | || | |||    
T  36429133 actatgatcttaaaaatactctttattctgaagggacatatattatcgacgagactatgtt-ttaagaccattcttaattccgaagggacattaaaacga 36429231  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaa 190  Q
    | | |||||| |||||||||||||||||||| ||| |||||| ||||||    
T  36429232 aaagggactatggtcttaagaacactcttaattccgaagggacagaaaa 36429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 36424059 - 36424207
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||  | |||||| |||||| | || |||||| |||||||| | || |||    
T  36424059 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaagagattatgtt-ttaagaccattcttaattccgaagggacattaaacc 36424157  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||||| |||||| ||| |||||| |||||    
T  36424158 gaaaagggactatggtcttaagaacagtcttaattccgaagggacagaaa 36424207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 37652624 - 37652476
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| | || |||||||||||||||||||||||||| || | |||||||| | |||| | || |||||| |||||||| | || |||    
T  37652624 ggactatgatcttaaaagtgctctttattctgaagggacatatattatcgaatggactatgtt-tcaagaccattcttaattccgaagggacattaaacc 37652526  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||||||||||||||||  |||||||||| |||||    
T  37652525 gaaaagggactatggtcttaagaacactcttatttccaaagggacagaaa 37652476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 557135 - 557240
Alignment:
Q  84 ttatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||||||||| ||||||||||||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| ||||||    
T  557135 ttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 557234  T
Q  184 aagaaa 189  Q
     |||||    
T  557235 cagaaa 557240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 561907 - 562012
Alignment:
Q  84 ttatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||||||||| ||||||||||||||| | || |||||| |||||||| | || |||||| | |||||| |||||||||||||||||||| ||| ||||||    
T  561907 ttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 562006  T
Q  184 aagaaa 189  Q
     |||||    
T  562007 cagaaa 562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 12103447 - 12103631
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| | ||||||||||| || ||||||||| |||| |||| ||| |||||| | ||  |||||  ||||||||| || |||    
T  12103447 ggactatgatcttaaaagtactctatattctgaaggcacgtatattatcgaagggactaggtt-ttaagatcattcgtaattctgaagggatattaaacc 12103545  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | | |||| ||||||||| |||||||||| ||| |||||| ||||||  ||||||  ||||||||  |||||| ||||||||    
T  12103546 gaaaaggaactatggtcttaagtacactcttaattccgaagggacagaaaatggagatgaagagaagaaagactcgtcaacacaag 12103631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 189
Target Start/End: Original strand, 7452176 - 7452322
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  7452176 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 7452272  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||| | ||||||||||| |||||||  ||| |||||| |||||    
T  7452273 gaaaagggacaatggtcttaagaaaactcttatttccgaagggacagaaa 7452322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 20180757 - 20180647
Alignment:
Q  116 ttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactc 214  Q
    ||||||| ||||||| | || |||||||| |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  || |||||  ||||    
T  20180757 ttaattttgaagggacattaaaccgaacagggactatggtcttaagaacactcttaattccgaagggatagaaaaaaggagatgaagaaaagaaagactc 20180658  T
Q  215 gttaacacaag 225  Q
    || ||||||||    
T  20180657 gtcaacacaag 20180647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 6513596 - 6513405
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| |  ||| ||||||| |||||||| |||||||||  ||| |||||||| |||||| | || ||||||||||||||| | |    
T  6513596 aaaagggactatgatcttaatagcactctttattccgaagggacttatattatcggagggactatgtttttaagatcattcttaatttcgaagggacatt 6513497  T
Q  135 ataccg-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||| || | | | |  |||||||| ||||||||||| ||  |||||| ||||||| ||||||  || |||||  |||||| ||||||||    
T  6513496 aaaccgaaataggaaatgtggtcttaataacactcttaattctgaagggacagaaaaaggagatgaagaaaagaaagactcgtcaacacaag 6513405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 13301140 - 13301041
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  13301140 aagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 13301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 15414454 - 15414375
Alignment:
Q  155 tcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    ||||||||||||| |||  ||  |||||| ||||||| |||||| |||||||||||||| |||||||||||| |||||||    
T  15414454 tcttaagaacacttttacttctgaagggacagaaaaaggagatgaggagaagaataacttgttaacacaagctggaggga 15414375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 4872416 - 4872505
Alignment:
Q  137 accgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||| | |||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  4872416 accgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 4872505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 39518861 - 39519002
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||| | ||| ||||||    
T  39518861 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaaggga 39518960  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  39518961 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 39519002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 39523500 - 39523641
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||| | ||| ||||||    
T  39523500 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaaggga 39523599  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  39523600 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 39523641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 36941921 - 36941815
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| | |||||| | || |||||| |||||||| | || |||||| | |||||| | |||||||||||||||||| ||| |||||    
T  36941921 attatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatgatcttaagaacactcttaattccgaaggg 36941822  T
Q  183 aaagaaa 189  Q
    | |||||    
T  36941821 acagaaa 36941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 2860134 - 2860061
Alignment:
Q  51 ttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcg 124  Q
    |||| |||||| |||||| |||| |||||||||||||| || ||||||||||||||| | | || |||||||||    
T  2860134 ttaagaatactctttattttgaaaggacatatattatcgaatgaactatgttcttaaaatcattcttaatttcg 2860061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 23977197 - 23977128
Alignment:
Q  120 tttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||| | |||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  23977197 tttcgaaagaataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggatagaaa 23977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 35679480 - 35679406
Alignment:
Q  124 gaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatg 198  Q
    ||||||| | || |||||| | |||||| |||||| ||||||||||||| ||| |||||| ||||||| ||||||    
T  35679480 gaagggacattaaaccgaaaagggactatggtctttagaacactcttaattccgaagggatagaaaaaggagatg 35679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 189
Target Start/End: Complemental strand, 12044840 - 12044685
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| || | |||||||| || ||||||| || ||  |||| |||||| ||||| || | || || ||| |||||||| |||    
T  12044840 aaaagggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttatgaccattcttgattccgaagggacaat 12044742  T
Q  135 ataccgaacatggactaa--ggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| |||  | ||||||   |||||||||||||||||||| |||||| ||| |||||    
T  12044741 atatcgacaagggactatatggtcttaagaacactcttaattccaaaaggacagaaa 12044685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 23688528 - 23688700
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatc-aaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaa 152  Q
    |||||| | ||||||| |||||||||||||| ||| ||||||| |||| |||||||| | || |||||| || | ||| | ||||||||| | |  |||     
T  23688528 aaaatagtctttattccgaagggacatatatcatcgaaaggaa-tatgctcttaagaccattcttaattccggacggacattataccgaaaaggttctat 23688626  T
Q  153 ggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    |||||||||||| ||||||| | | |||||| | |||||| ||||||  ||||||||  ||| || ||||||||    
T  23688627 ggtcttaagaactctcttaatttcgaagggacataaaaaaggagatgaagagaagaaacacttgtcaacacaag 23688700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 31732036 - 31732081
Alignment:
Q  144 atggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  31732036 atggactatggtcttaagaacactcttaattccgaagggacagaaa 31732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 25496997 - 25496814
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||||    
T  25496997 actatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccga 25496899  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    | | ||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  | |||| ||||||||    
T  25496898 aaagggactaaggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagattcgtcaacacaag 25496814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 225
Target Start/End: Original strand, 12797350 - 12797530
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaac 143  Q
    |||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || ||||||  ||||||| | || ||||||     
T  12797350 tatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagagcattcttaattctgaagggacattaaaccgaaa 12797448  T
Q  144 atggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||||| ||| |||||||||||||||| ||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  12797449 agggactatggtattaagaacactcttaattccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 12797530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 265
Target Start/End: Complemental strand, 40847271 - 40847040
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| | ||||||  ||| |||||||| |||||| |||| |||||||| |  ||||||| |||||| |||| ||||||||||| ||| | |    
T  40847271 aaaagggactatgatattaaaagcactctttattcttaagggagatatgttatcaaaagggctatgtttttaagacctttcttaatttcgaatggacatt 40847172  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaagccggaggg 233  Q
    |||| ||| | ||||||||||||||||||||||||||  | | |||||| |||||||| |||||| ||||||||||| ||||| | || |||| ||| ||    
T  40847171 atactgaatagggactaaggtcttaagaacactcttattttcgaagggatagaaaaaaggagatgaggagaagaatagctcgtcagcagaagctggatgg 40847072  T
Q  234 ataaaagggaaagtgttctcgacaattcaata 265  Q
    | || || |||||  |||||||||| ||||||    
T  40847071 agaagagagaaagaattctcgacaactcaata 40847040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 25477969 - 25477786
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||||    
T  25477969 actatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaccga 25477871  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    | | |||||| |||||||| |||||| |||| | | |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  25477870 aaagggactatggtcttaaaaacacttttaatttcgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 25477786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 1934667 - 1934485
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| |  | |||    
T  1934667 ggactatgatcttaaaagtattctttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacatgaaacc 1934571  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  1934570 gaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 1934485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 31327171 - 31327356
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||||||||||  |||||||||||||||||| ||||||||||||| |||||| | || |||||| |||||||| | |  |||    
T  31327171 ggactatgatcttaaaagtactttttatttcgaagggacatatattatcgaaggaactatgtt-ttaagaccattcttaattccgaagggacattgaacc 31327269  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | |||| |||||| |||||||||||||||||||| | | |||||| | ||||| ||||||  ||||||||  ||| || ||||||||    
T  31327270 gaaacagggactatggtcttaagaacactcttaatttcgaagggacaaaaaaaggagatgaagagaagaaagacttgtcaacacaag 31327356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 17968637 - 17968489
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||| ||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  17968637 ggactatgatcttaaaagtactctttattttgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaacc 17968539  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| ||||||||||||||| |||| ||| |||||| |||||    
T  17968538 gaaaagggactatggtcttaagaacacttttaattccgaagggacagaaa 17968489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 18344844 - 18344986
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || || ||| |||| ||| | || |||    
T  18344844 ggactatgatcttaaaagtactatttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttcattccgaaaggacattaaacc 18344942  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
     || | |||||| |||||||||||||||||||| ||| ||||||    
T  18344943 aaaaagggactatggtcttaagaacactcttaattccgaaggga 18344986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 19892147 - 19892016
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| || | |||||||| |||||| | || ||||||  ||||||| | || |||    
T  19892147 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaatggactatgtt-ttaagaccattcttaattctgaagggacattaaacc 19892049  T
Q  140 gaacatggactaaggtcttaagaacactcttaa 172  Q
    ||| | |||||| | ||||||||||||||||||    
T  19892048 gaaaagggactatgatcttaagaacactcttaa 19892016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 9180399 - 9180218
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| |||||||| |||| ||||| ||||||||||||   ||||| |||| ||||| || |||||| | || |||||| |||||||| | || |||||    
T  9180399 actatgatcttaaaagtactctttatcctgaagggacat---ttatcgaagggactatttttttaagaccattcttaattccgaagggacattaaaccga 9180303  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    | |  ||||| |||||||||||||||||||| ||| |||||  |||||||| ||||||  ||||||||  |||||| ||||||||    
T  9180302 aaagcgactatggtcttaagaacactcttaattccgaaggggcagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 9180218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 9185092 - 9184909
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||| ||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||    
T  9185092 ggactatgatcttaaaagtactctttatcctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaacc 9184996  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaaggga-aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| |  ||||| |||||||||||||||||||  ||| |||||| || ||||| ||||||  ||||||||   ||||| ||||||||    
T  9184995 gaaaagcgactatggtcttaagaacactcttatttccgaagggacaaaaaaaaggagatgaagagaagaaaggctcgtcaacacaag 9184909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 265
Target Start/End: Complemental strand, 19578161 - 19578029
Alignment:
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaa-gggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagg 232  Q
    ||||||||| |  ||||||| |||||||||||||||||| |||||| |||| ||||||| |||||| |||||| ||||||||||||||| |  | |||||    
T  19578161 tataccgaatagagactaagttcttaagaacactcttaattccaaaagggacagaaaaaggagatgaggagaaaaataactcgttaacaaaccctggagg 19578062  T
Q  233 gataaaagggaaagtgttctcgacaattcaata 265  Q
    || || || ||||| ||| ||||||| ||||||    
T  19578061 gagaagagagaaagagttttcgacaactcaata 19578029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 17453232 - 17453097
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| | |||||| | || |||||| |||||| | ||||||| ||| | |||||  |||||||||| ||||||||| |||||||||| |||||    
T  17453232 aagggactatgctattaagaccattcttaattccgaaggaacaatatactgaaaaaggactttggtcttaagagcactcttaattccaaagggacagaaa 17453133  T
Q  190 aaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||||  |||||||||| || |||||||||||    
T  17453132 gaagagatgaagagaagaatagcttgttaacacaag 17453097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 183
Target Start/End: Complemental strand, 6297578 - 6297449
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| || |||| |||||||| |||||  |||||||| |    
T  6297578 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttatttccgaaaggataataaaccgacgatggactatg 6297479  T
Q  154 gtcttaagaacactcttaaatccaaaggga 183  Q
    ||||||||||||||||||| ||| ||||||    
T  6297478 gtcttaagaacactcttaattccgaaggga 6297449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 30651380 - 30651521
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||| | ||| ||||||    
T  30651380 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaaggga 30651479  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  30651480 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 30651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 10160426 - 10160288
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    ||||||||||||| |||||||| || | |||||||| || ||||||| || ||  |||| |||||| |||||||| | || || ||| |||||||| |||    
T  10160426 aaaatggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccgaagggacaat 10160328  T
Q  135 ataccgaacatggactaa--ggtcttaagaacactcttaa 172  Q
    ||| |||  ||||||||   ||||||||||||||||||||    
T  10160327 atatcgacaatggactatatggtcttaagaacactcttaa 10160288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 13291207 - 13291077
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| ||||||||||||| |||||||| |||||||||| |||||| |||| | |||  |||||||| | || | |||| |||||||| | |||| | |    
T  13291207 actatgatcttaaaaatactatttattcttaagggacataaattatcgaagggattatactcttaagaccattgtcaattccgaagggacattatatcta 13291108  T
Q  142 acatggactaaggtcttaagaacactcttaa 172  Q
      | || ||| | ||||||||||||||||||    
T  13291107 gaagggtctatgatcttaagaacactcttaa 13291077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 29678220 - 29678361
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||||||||||  ||||||| | || |||||| |||||| | | | | |||||| | |||||| |||||||||||||||||||| ||  |||| |    
T  29678220 tatcgaaggaactatgaacttaagaccattcttaattccgaaggaacatttaaaccgaatagggactatggtcttaagaacactcttaattctgaaggaa 29678319  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  29678320 cagaaaaatgagatgaagagaagaaagactcgtcaacacaag 29678361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 42926211 - 42926134
Alignment:
Q  148 actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||| ||| |||||||||||||||| ||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  42926211 actatggtattaagaacactcttaattccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 42926134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 30643513 - 30643651
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| || | |||||||| || ||||||| || ||  |||| |||||| |||||||| | || || ||| ||||||||||||    
T  30643513 aaaagggactatgatcttaaaa-tattctttattctaaaaggacataaataattgaagggactatgctcttaagaccattcttgattccgaagggataat 30643611  T
Q  135 ataccgaacatggac--taaggtcttaagaacactcttaa 172  Q
    ||| |||  | ||||  || ||||||||||||||||||||    
T  30643612 atatcgacaagggactatatggtcttaagaacactcttaa 30643651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 38591634 - 38591722
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||||| ||||||||||||| ||||||   |||||||||| ||||||||| | |||||||| |||||| | ||  || |||||||||||    
T  38591634 actatgatcttaaaaatactctttattacaaagggacataaattatcaaatggactatgtttttaagatcattcatattttcgaaggga 38591722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 7712673 - 7712606
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatt 121  Q
    ||||||||||||||| ||||| |||| | ||||||||||  |||||| |||||||| | |||||||||    
T  7712673 aaaatactttttattttgaagtgacacaaattatcaaagcgactatgctcttaagatcatttttaatt 7712606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 7737433 - 7737354
Alignment:
Q  146 ggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaa 224  Q
    |||||| |||||||||||| ||||||| ||| |||||| |||||||| || |||  |||||||| ||||||| |||||||    
T  7737433 ggactatggtcttaagaacgctcttaactccgaagggacagaaaaaatgatatgaagagaagaaaaactcgtcaacacaa 7737354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 38427119 - 38427031
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    ||||||| ||||||||||| | ||||||  ||||||||||| |||||| ||||||| ||| || ||| | | ||||||||| ||||||||    
T  38427119 gactatgatcttaaaaatattatttatttcgaagggacataaattatcgaaggaaccatgctc-taaaaccatttttaattccgaaggga 38427031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 7526 - 7710
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||| ||||||||||||| |||| |||||||| |||||| | || ||||||||||||||| | || |||    
T  7526 ggactatgatcttaaaagtactctttattctgaagagacatatattatcgaagggactatgtt-ttaagaccattcttaatttcgaagggacattaaacc 7624  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| |||||||| ||||||||||| ||| |||||| ||||||| ||||||  || |||||  |||||| ||||||||    
T  7625 gaaaagggactatggtcttaataacactcttaattccgaagggacagaaaaaggagatgaagataagaacgactcgtcaacacaag 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 85 - 255
Target Start/End: Original strand, 17914051 - 17914221
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaa 184  Q
    ||||||||| ||||||  ||||||| | || |||||| |||||||| | |||| |||| |||||||| |||||||||||||||||||||||| || |||     
T  17914051 tatcaaagggactatgcacttaagaccattcttaattccgaagggacattatatcgaaaatggactatggtcttaagaacactcttaaatccgaaaggac 17914150  T
Q  185 agaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcga 255  Q
    ||||||| |||||| ||||||||||| ||||| ||||||||| ||||||| ||  | ||||| ||||||||    
T  17914151 agaaaaaggagatgaggagaagaatagctcgtcaacacaagctggagggagaagtgagaaagagttctcga 17914221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 16835809 - 16835650
Alignment:
Q  63 tttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaaga 162  Q
    ||||||||||||||||||   ||||| |||| |||||||| |||||| | || |||||| |||||||| | || |||||| | |||||| ||||||||||    
T  16835809 tttattctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaaga 16835713  T
Q  163 acactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  16835712 acactcttaaatccgaagggacagaaaaatgagatgaagagaagaaagactcgtcaacacaag 16835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 2760089 - 2759868
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||||||||||||||||||||| || | |||||||| ||| |||||| || ||  | ||||||||| |||||||| | || ||||   |||||||| |||    
T  2760089 aaaatggactatggtcttaaaa-tattatttattctaaagagacataaataattgagggaactatgctcttaagaccattcttaaaaccgaagggacaat 2759991  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggaggga 234  Q
    | |||||||| | | |  ||||||||||||||||  || || ||||||| ||||||| |||||| ||||| ||||||||||||||||||||||| |||||    
T  2759990 aaaccgaacaggaattgtggtcttaagaacactca-aattctaaagggatagaaaaaggagatgaggagaggaataactcgttaacacaagccgaaggga 2759892  T
Q  235 taaaagggaaagtgttctcgacaa 258  Q
     || || ||||| ||| |||||||    
T  2759891 gaagagagaaagagttatcgacaa 2759868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 265
Target Start/End: Complemental strand, 19995054 - 19994847
Alignment:
Q  58 tactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtct 157  Q
    |||| ||||||||||||||||||| |||||  |||| |||||||| |||| | |||| ||||||  ||||||| | ||||| ||| | |||||||| |||    
T  19995054 tactctttattctgaagggacatacattatagaagggactatgtttttaaaacctttcttaattctgaagggacattatactgaatagggactaagatct 19994955  T
Q  158 taagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgaca 257  Q
    ||| ||||||||||  | | |||||| ||||||| |||||  |||||||||||  |||| ||||||||| ||||||| || || ||||| |||||| |||    
T  19994954 taaaaacactcttattttcgaagggacagaaaaaggagattaggagaagaatagatcgtcaacacaagctggagggagaagagagaaagagttctctaca 19994855  T
Q  258 attcaata 265  Q
    | ||||||    
T  19994854 actcaata 19994847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 6407535 - 6407353
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||||||||||||||   ||||||| ||| ||||||| |||||| | || |||||| |||||| | | || |||    
T  6407535 ggactatgatcttaaaagtactctttattctgaagggacat---ttatcaaggga-ctatgtttttaagaccattcttaattccgaaggaacattaaacc 6407440  T
Q  140 gaacatgg-actaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | || |||| |||||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||  |||||| ||||||||    
T  6407439 gaaaaagggactatggtcttaagaacactcttaaatccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaag 6407353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 11559894 - 11559725
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| ||||||||||||||||||||| | |||||||| |||||| | || |||||| |||||||| | || |      
T  11559894 ggactatgatcttaaaagtactctttattccgaagggacatatattatcaaatggactatgtttttaagaccattcttaattccgaagggacattaaatt 11559795  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaa 208  Q
    | || | |||||| |||||||||||||||||||| ||| |||||| ||||||  ||||||  ||||||||    
T  11559794 gaaagagggactatggtcttaagaacactcttaattccgaagggacagaaaatggagatgaagagaagaa 11559725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 11570422 - 11570253
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||| || |||||||||||||||||| || | |||||||| |||||| | || |||||| |||||||| | || | |    
T  11570422 ggactatgatcttaaaagtactctttaatccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaatc 11570323  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaa 208  Q
    | || | |||||| |||||||||||||||||||| ||| |||||| ||||||| ||||||  ||||||||    
T  11570322 gaaagagggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagagaagaa 11570253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 20747974 - 20747793
Alignment:
Q  44 tatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaac 143  Q
    |||| ||||||||||| | ||||||| ||||||||||||||||||||||| |||||||| |||||| | || |||||| |||||||| | |||| || |     
T  20747974 tatgatcttaaaaatattctttattccgaagggacatatattatcaaagggactatgtttttaagatcattcttaattccgaagggacattatatcggaa 20747875  T
Q  144 atggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    |  ||||| ||||||||||||| |||||| | | |||||| |  |||| ||||||  |||||||| ||||||| ||| ||||    
T  20747874 agagactatggtcttaagaacattcttaatttcgaagggacaagaaaaggagatgaagagaagaaaaactcgtcaacgcaag 20747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 22694990 - 22694853
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||||| |||| ||||||| |||||| |||| |||||  || |||||||||| |||||| |||| ||||||   |||||| | |    
T  22694990 aaaagggactatgatcttaaaagtactctttattccgaaggggcatacattattgaatgaactatgtttttaagacctttcttaattcttaagggacatt 22694891  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaa 172  Q
    |||||||| | |||||||||||||||||||||||||||    
T  22694890 ataccgaatagggactaaggtcttaagaacactcttaa 22694853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 12689393 - 12689560
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||| ||||||||||||  |||| |||||||| |||||| | || |||||| ||||||||   || |||    
T  12689393 ggactatgatcttaaaagtactatttattctgaagagacatatattattgaagggactatgtt-ttaagaccattcttaattccgaagggacgttaaacc 12689491  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaa 208  Q
    ||| |||||||| |||||||| ||||||||||| ||| ||||||  | |||| ||||||  ||||||||    
T  12689492 gaaaatggactatggtcttaaaaacactcttaattccgaagggactgtaaaaggagatgaagagaagaa 12689560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 2699776 - 2699585
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat 134  Q
    |||| |||||||| |||||| | |||| ||||||| ||||| || ||||||||| |||| |||||||| ||||||   || ||||||  ||||||| | |    
T  2699776 aaaagggactatgatcttaatagtactctttattccgaaggaacttatattatcgaagggactatgtttttaagattattcttaattctgaagggacatt 2699677  T
Q  135 ataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacacaag 225  Q
    | |||||| | |||||| ||| |||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| ||||||||    
T  2699676 aaaccgaaaagggactatggttttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag 2699585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 264
Target Start/End: Complemental strand, 12405978 - 12405812
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaaga 194  Q
    |||| ||| ||||||  ||| ||||||  ||||||| | ||||||||| | ||||||||||||||||||||||||||  ||| |||||| ||||||| ||    
T  12405978 actacgtttttaagacttttcttaattctgaagggacattataccgaatagggactaaggtcttaagaacactcttatttccgaagggacagaaaaatga 12405879  T
Q  195 gatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgacaattcaat 264  Q
    |||| ||||||||||| ||||  ||||||||| |||||   || || ||||| ||||||||||| |||||    
T  12405878 gatgaggagaagaatagctcgccaacacaagctggagg---aagagagaaagagttctcgacaactcaat 12405812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 225
Target Start/End: Complemental strand, 4157037 - 4156843
Alignment:
Q  34 aaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataa 133  Q
    ||||| ||| |||| |||||| |||||| ||||||| |||||||| ||||||||  |||  |||||||| |||||| | || |||||| |||||||| |     
T  4157037 aaaaagggattatgatcttaataatactctttattccgaagggacttatattattgaagtgactatgtttttaagaccattcttaattccgaagggacat 4156938  T
Q  134 tataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga---aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    || |||||| | |||||| ||||||||||||| |||||| ||| ||||||   |||||||| |||||   || |||||  |||||||||||||||    
T  4156937 taaaccgaaaaaggactatggtcttaagaacaatcttaattccgaagggacagaagaaaaaggagataaagaaaagaaagactcgttaacacaag 4156843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 17964233 - 17964085
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||| |||| |||||||||||||| |||| |||||||| |||||| | || |||||| |||||||| | || | |    
T  17964233 ggactatgatcttaaaagtactctttattttgaatggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaagggacattaaaac 17964135  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||| | |||||| |||||| ||||||||| ||| ||| |||||| |||||    
T  17964134 gaaaaaggactatggtcttgagaacactcataattccgaagggacagaaa 17964085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 25314130 - 25313945
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| || | |||||||| |||||| | || ||||||   |||||  | || |||    
T  25314130 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaacc 25314031  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
        | |||||| |||||||| ||||||||||| ||| |||||| ||||||| ||||||  || |||||  |||||| ||||||||    
T  25314030 agcaagggactatggtcttaaaaacactcttaattccgaagggatagaaaaaggagatgaagaaaagaaagactcgtcaacacaag 25313945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 26201624 - 26201439
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||| || | |||||||| |||||| | || ||||||   |||||  | || |||    
T  26201624 ggactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaacc 26201525  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
        | |||||| |||||||| ||||||||||| ||| |||||| ||||||| ||||||  || |||||  |||||| ||||||||    
T  26201524 agcaagggactatggtcttaaaaacactcttaattccgaagggatagaaaaaggagatgaagaaaagaaagactcgtcaacacaag 26201439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 11534384 - 11534240
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| || | |||||||  |||||||||||||||||||| | |||||||| |||||| | ||||||||| |||||||| | || |      
T  11534384 ggactatgatcttaaaagtattctttattcctaagggacatatattatcaaatggactatgtttttaagaccatttttaattccgaagggacattaaatt 11534285  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    | || | |||||| |||||||||||||||||||| ||| ||||||    
T  11534284 gaaagagggactatggtcttaagaacactcttaattccgaaggga 11534240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 33687324 - 33687139
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| |||||||| |||| ||||||| ||||| |||||||||||| |||  |||||||| |||||| | |  |||||| |||||||| | || |||    
T  33687324 ggactatgatcttaaaagtactctttattccgaaggaacatatattatcgaagagactatgtt-ttaagaccatacttaattgcgaagggacattaaacc 33687226  T
Q  140 g-aacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    | || | |||||| ||||||||||| |||||||| ||  ||||||  |||||| ||||||  || |||||  |||||| ||||||||    
T  33687225 gaaaaagggactatggtcttaagaagactcttaattctgaagggatggaaaaaggagatgaagaaaagaaagactcgtcaacacaag 33687139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 12799510 - 12799401
Alignment:
Q  157 ttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtgttctcgac 256  Q
    |||||||||||||||| |   |||||| | ||||| |||||  ||||||||||||||||||||||  ||| ||| ||| || || ||||| ||| || ||    
T  12799510 ttaagaacactcttaattttgaagggataaaaaaatgagataaggagaagaataactcgttaacattagctggaaggagaagagagaaagagttttcaac 12799411  T
Q  257 aattcaatag 266  Q
    ||||||||||    
T  12799410 aattcaatag 12799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 266
Target Start/End: Original strand, 17599797 - 17600014
Alignment:
Q  49 tcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatgga 148  Q
    |||||||| |||| || ||| |||| ||||||| |||||| |    |||||||| |||| | |||| |||||| |||||||| | |||||| || |   |    
T  17599797 tcttaaaagtactcttcattttgaatggacatacattatcgatttgactatgtttttaaaacctttcttaattccgaagggacattataccaaatagaaa 17599896  T
Q  149 ctaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataaaagggaaagtg 248  Q
     |||||||||||||||| |||||  | | |||||| | |||||  ||||  ||||||||||| ||||| ||||||||  ||| ||| || || ||||| |    
T  17599897 ataaggtcttaagaacattcttattttcgaagggatataaaaagaagattaggagaagaatagctcgtcaacacaagttggatggagaagagagaaagag 17599996  T
Q  249 ttctcgacaattcaatag 266  Q
    || ||||||| |||||||    
T  17599997 ttttcgacaactcaatag 17600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 22610019 - 22610133
Alignment:
Q  95 actatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg--aaagaaaaaa 192  Q
    |||||| |||||| | | || |||||| ||||| || | ||||||||| | ||| || |||||||||||||||||||| ||| |||||  ||| |||||     
T  22610019 actatgctcttaaaaccattcttaattccgaagtgacattataccgaaaagggattatggtcttaagaacactcttaattcctaagggacaaaaaaaaag 22610118  T
Q  193 gagatggggagaaga 207  Q
    |||||| ||||||||    
T  22610119 gagatgaggagaaga 22610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 32001862 - 32001791
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttctta 106  Q
    |||| |||||||| || ||||||||||  ||||| ||||| || ||| |||||| |||||||||||||||||    
T  32001862 aaaagggactatgatcgtaaaaatactaattattttgaagagatataaattatcgaaggaactatgttctta 32001791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 5856467 - 5856523
Alignment:
Q  71 gaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaag 127  Q
    |||||||| ||||||||| |||| |||||||| |||||| | || ||||||||||||    
T  5856467 gaagggacttatattatcgaagggactatgtttttaagaccattcttaatttcgaag 5856523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 14042057 - 14042097
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  14042057 aaggaactatgttcttaagaccattcttaatttcgaaggga 14042097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 225
Target Start/End: Original strand, 4395 - 4578
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccga 141  Q
    |||||| ||||||||||| | ||||||| |||||||| ||||||||| |||| |||||| | ||||| || || |||||| |||||||| | ||||||||    
T  4395 actatgatcttaaaaatattctttattccgaagggacgtatattatcgaagggactatgcttttaag-acattcttaattccgaagggacattataccga 4493  T
Q  142 acatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa-aaagagatggggagaagaataactcgttaacacaag 225  Q
    | ||| |||| |||||||||||||| ||||| ||| |||||| | ||| || |||||| ||||||||||| ||||| ||||||||    
T  4494 aaatgaactatggtcttaagaacacacttaattccgaagggacataaataaggagatgaggagaagaatagctcgtcaacacaag 4578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 25854 - 26059
Alignment:
Q  20 gacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaa 119  Q
    ||||| || ||| |||||| |||||||| |||||| |  ||| ||||||| |||||||| ||||||||| |||| |||||||| |||||| | || ||||    
T  25854 gacattattattccaaaaagggactatgatcttaatagcactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaa 25953  T
Q  120 tttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaa 219  Q
    ||||||||||| | || |||||| | |||||| ||||||||||||| || ||| ||| ||||||   ||||| ||||||  ||||||||  |||| | ||    
T  25954 tttcgaagggacattaaaccgaaaagggactatggtcttaagaacaatcgtaattccgaagggacgaaaaaaggagatgaagagaagaaagactcatcaa 26053  T
Q  220 cacaag 225  Q
    ||||||    
T  26054 cacaag 26059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 29574 - 29779
Alignment:
Q  20 gacatcatcattacaaaaatggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaa 119  Q
    ||||| || ||| |||||| |||||||| |||||| |  ||| || |||| |||||||| |||||||||||||| |||||||| |||||| | || ||||    
T  29574 gacattattattccaaaaagggactatgatcttaatag-actcttcattccgaagggacttatattatcaaagggactatgtttttaagaccattcttaa 29672  T
Q  120 tttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgtta 218  Q
    ||  ||||||| | || |||||| | ||| || | |||||||||||||||||| ||| |||||| |||||||| ||||||  ||||||||  |||||| |    
T  29673 ttctgaagggacattaaaccgaagagggaatatgatcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtca 29772  T
Q  219 acacaag 225  Q
    |||||||    
T  29773 acacaag 29779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 443619 - 443435
Alignment:
Q  40 ggactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatatacc 139  Q
    |||||||| | |||||| |||| |||||||||||||||||||||||||| |||| |||||||| |||||| | || |||||| |||||| | | || ||     
T  443619 ggactatgattttaaaagtactctttattctgaagggacatatattatcgaagggactatgtt-ttaagaccattcttaattccgaaggaacattaaact 443521  T
Q  140 gaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
    ||| | |||||| ||||||||||||||| |||| ||| |||||| | ||||| ||||||  || |||||  ||| |||||||||||    
T  443520 gaaaagggactatggtcttaagaacactattaattccgaagggacaaaaaaaggagatgaagacaagaaagacttgttaacacaag 443435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 4526 - 4667
Alignment:
Q  85 tatcaaaggaactatgttcttaagaacttttttaatttcgaagggataat-ataccgaacatggactaaggtcttaagaacactcttaaatccaaaggga 183  Q
    |||| |||| ||||||  ||||||| | || |||||| |||||||| | | | |||||| | |||||| |||||||||||||||||||| ||| ||||||    
T  4526 tatcgaagggactatgaacttaagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaaggga 4625  T
Q  184 aagaaaaaagagatggggagaagaataactcgttaacacaag 225  Q
     ||||||| ||||||  ||||||||  |||||| ||||||||    
T  4626 cagaaaaaggagatgaagagaagaaagactcgtcaacacaag 4667  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 926 - 791
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||| |||||||| | || ||| ||||||| |||||||| |||||  |||||||| |    
T  926 aaaatattatttattctaaagagacataaataattgaagggactatgctcttaagaccattcttattttcgaaaggataataaaccgacgatggactatg 827  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
     ||||||||||||| |||| ||| |||||| |||||    
T  826 atcttaagaacacttttaattccgaagggacagaaa 791  T

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Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 9537 - 9431
Alignment:
Q  83 attatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaaggg 182  Q
    |||||| |||| |||||| |||||||| | || |||||| |||| ||| | || |||||| | |||||| |||||||||||||||||||| ||| |||||    
T  9537 attatcgaagggactatgctcttaagaccattcttaattccgaatggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggg 9438  T
Q  183 aaagaaa 189  Q
    | |||||    
T  9437 acagaaa 9431  T

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Target: scaffold0690 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 5712 - 5764
Alignment:
Q  35 aaaatggactatggtcttaaaaatactttttattctgaagggacatatattat 87  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||| |||||    
T  5712 aaaatggactatgatcttaaaagtactctttattctgaagggacataaattat 5764  T

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Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 47658 - 47523
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  ||||  ||||| |||||||| | || ||| ||  ||| |||||||| |||||  |||||||| |    
T  47658 aaaatattatttattctaaagagacataaataattgaaggggctatgctcttaagaccattcttatttctgaaaggataataaaccgacgatggactatg 47559  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||||||||||||||| ||| |||||| |||||    
T  47558 gtcttaagaacactcttaattccgaagggacagaaa 47523  T

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Target: scaffold0060; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 52602 - 52467
Alignment:
Q  54 aaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaag 153  Q
    |||||| | |||||||| ||| |||||| || ||  |||| |||||  |||||||| | || ||| || |||| |||||||| |||||  |||||||| |    
T  52602 aaaatattatttattctaaagagacataaataattgaagggactatactcttaagaccattcttatttccgaaaggataataaaccgacgatggactatg 52503  T
Q  154 gtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    ||||||||||||||||||| ||  |||||| |||||    
T  52502 gtcttaagaacactcttaattctgaagggacagaaa 52467  T

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Target: scaffold0060; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 55682 - 55738
Alignment:
Q  42 actatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactat 99  Q
    |||||| ||||||||||||| |||||| |||| ||| ||| |||||||||||||||||    
T  55682 actatgatcttaaaaatactatttattttgaaaggatata-attatcaaaggaactat 55738  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 35354 - 35255
Alignment:
Q  90 aaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||| |||||| |||||||| | |||||| || |||| |||||||| | |||  ||||| || |||||||||||||||||||| ||| |||||| |||||    
T  35354 aagggactatgctcttaagaccatttttatttccgaaaggataataaaacgacgatggattatggtcttaagaacactcttaattccgaagggatagaaa 35255  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 49595 - 49534
Alignment:
Q  128 ggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  49595 ggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 49534  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 171444 - 171356
Alignment:
Q  41 gactatggtcttaaaaatactttttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaaggga 130  Q
    ||||||| ||||||||||||| ||  ||||||||||||| || ||||| |||| |||| |||||||||| | || |||||| ||||||||    
T  171444 gactatgatcttaaaaatactcttatttctgaagggacaaat-ttatcgaagggactacgttcttaagaccattcttaattccgaaggga 171356  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 149039 - 149100
Alignment:
Q  128 ggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaa 189  Q
    |||||||| |||||  |||||||| |||||||||||||||||||| ||| |||||| |||||    
T  149039 ggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 149100  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 266
Target Start/End: Original strand, 256292 - 256435
Alignment:
Q  124 gaagggataatataccgaacatggactaaggtcttaagaacactcttaaatccaaagggaaagaaaaaa-gagatggggagaagaataactcgttaacac 222  Q
    ||||||| |||| |||||| | |||||| ||||||||||||| |||||| ||| || ||| |||||||| |||||  ||||||||| | || ||| || |    
T  256292 gaagggacaataaaccgaaaagggactacggtcttaagaacattcttaattccgaatggacagaaaaaaggagataaggagaagaaaatcttgttcacgc 256391  T
Q  223 aagccggagggataaaagggaaagtgttctcgacaattcaatag 266  Q
    |||  ||||| | || || ||||| ||| ||||||| |||||||    
T  256392 aagttggaggaagaagagagaaagagttatcgacaactcaatag 256435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 81231 - 81359
Alignment:
Q  63 tttattctgaagggacatatattatcaaaggaactatgttcttaagaacttttttaatttcgaagggataatataccgaacatggactaa--ggtcttaa 160  Q
    |||||||| || ||||||| |||||  |||| | |||| |||||||| | || || ||| |||||||| ||||||| ||  | ||||||   ||||||||    
T  81231 tttattctaaaaggacataaattattgaagggattatgctcttaagatcattattgattccgaagggacaatatacggacaagggactatatggtcttaa 81330  T
Q  161 gaacactcttaaatccaaagggaaagaaa 189  Q
    |||||||||||| ||| |||||| |||||    
T  81331 gaacactcttaattccgaagggacagaaa 81359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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