View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0684_low_78 (Length: 287)

Name: NF0684_low_78
Description: NF0684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0684_low_78
NF0684_low_78
[»] chr5 (35 HSPs)
chr5 (63-238)||(6252348-6252526)
chr5 (81-137)||(42522722-42522778)
chr5 (85-152)||(40483058-40483125)
chr5 (82-135)||(14725289-14725342)
chr5 (81-118)||(40693304-40693341)
chr5 (81-152)||(27598335-27598406)
chr5 (83-162)||(35695243-35695322)
chr5 (81-131)||(835634-835684)
chr5 (80-149)||(11487234-11487303)
chr5 (82-131)||(14861849-14861898)
chr5 (81-190)||(27175125-27175234)
chr5 (81-197)||(3955849-3955965)
chr5 (81-153)||(39850393-39850465)
chr5 (81-152)||(13998626-13998697)
chr5 (81-188)||(19840291-19840398)
chr5 (81-176)||(43530534-43530629)
chr5 (83-137)||(2463467-2463521)
chr5 (83-137)||(3246651-3246705)
chr5 (83-125)||(11832445-11832487)
chr5 (92-162)||(22012375-22012445)
chr5 (73-162)||(28727900-28727987)
chr5 (83-137)||(28746516-28746570)
chr5 (83-137)||(29874864-29874918)
chr5 (83-137)||(36242150-36242204)
chr5 (81-210)||(41879797-41879926)
chr5 (73-118)||(3165645-3165690)
chr5 (87-152)||(3945184-3945249)
chr5 (81-118)||(37516893-37516930)
chr5 (81-166)||(39178135-39178220)
chr5 (92-137)||(39585056-39585101)
chr5 (81-113)||(14930730-14930762)
chr5 (103-163)||(31202017-31202077)
chr5 (81-109)||(32654039-32654067)
chr5 (80-116)||(35627245-35627281)
chr5 (85-113)||(36629689-36629717)
[»] chr2 (28 HSPs)
chr2 (85-206)||(23914715-23914836)
chr2 (81-209)||(23914513-23914641)
chr2 (81-153)||(35468717-35468789)
chr2 (81-152)||(744911-744982)
chr2 (81-131)||(30675544-30675594)
chr2 (85-162)||(21384663-21384740)
chr2 (81-137)||(11538383-11538439)
chr2 (82-190)||(13277888-13277995)
chr2 (85-162)||(41860288-41860365)
chr2 (81-156)||(6674931-6675006)
chr2 (81-192)||(26966407-26966518)
chr2 (83-137)||(1693065-1693119)
chr2 (83-137)||(3079541-3079595)
chr2 (81-115)||(9546131-9546165)
chr2 (83-137)||(10120435-10120489)
chr2 (83-137)||(13552099-13552153)
chr2 (98-208)||(16568200-16568310)
chr2 (83-137)||(22077982-22078036)
chr2 (81-115)||(29353776-29353810)
chr2 (81-131)||(34118958-34119008)
chr2 (81-115)||(34423875-34423909)
chr2 (83-137)||(38709530-38709584)
chr2 (83-137)||(38878963-38879017)
chr2 (83-137)||(40202054-40202108)
chr2 (83-137)||(41452657-41452711)
chr2 (81-193)||(352320-352433)
chr2 (81-162)||(14690108-14690188)
chr2 (81-137)||(10886557-10886613)
[»] chr8 (33 HSPs)
chr8 (96-162)||(7975945-7976011)
chr8 (81-183)||(15920025-15920126)
chr8 (81-137)||(4438542-4438598)
chr8 (81-152)||(13206130-13206201)
chr8 (82-137)||(19341860-19341915)
chr8 (81-162)||(11420424-11420505)
chr8 (95-187)||(35173369-35173462)
chr8 (81-165)||(4205161-4205245)
chr8 (81-125)||(23038508-23038552)
chr8 (72-111)||(4437486-4437525)
chr8 (82-137)||(38137915-38137970)
chr8 (81-210)||(1657845-1657974)
chr8 (81-131)||(2442259-2442309)
chr8 (83-137)||(6746981-6747035)
chr8 (83-137)||(11579015-11579069)
chr8 (83-137)||(12261671-12261725)
chr8 (83-137)||(33848886-33848940)
chr8 (81-143)||(34103436-34103498)
chr8 (80-193)||(36801828-36801942)
chr8 (83-137)||(38139135-38139189)
chr8 (83-137)||(38909109-38909163)
chr8 (83-137)||(39525275-39525329)
chr8 (83-137)||(41526137-41526191)
chr8 (84-137)||(6657236-6657289)
chr8 (84-137)||(6737638-6737691)
chr8 (81-166)||(11439069-11439154)
chr8 (80-125)||(11912047-11912092)
chr8 (81-162)||(34882270-34882350)
chr8 (83-136)||(45139248-45139301)
chr8 (82-162)||(3539284-3539364)
chr8 (88-152)||(40038900-40038964)
chr8 (82-118)||(40721264-40721300)
chr8 (81-125)||(41790317-41790361)
[»] chr7 (27 HSPs)
chr7 (80-156)||(47437806-47437882)
chr7 (78-149)||(1292083-1292154)
chr7 (73-152)||(10039414-10039493)
chr7 (81-151)||(32358849-32358919)
chr7 (81-166)||(43358729-43358814)
chr7 (81-133)||(35338366-35338418)
chr7 (73-152)||(10039626-10039705)
chr7 (83-137)||(4492630-4492684)
chr7 (81-131)||(29285585-29285635)
chr7 (80-118)||(44410537-44410575)
chr7 (92-161)||(40358459-40358528)
chr7 (103-183)||(10040844-10040924)
chr7 (92-156)||(39617376-39617440)
chr7 (81-152)||(9059314-9059385)
chr7 (81-210)||(5096512-5096641)
chr7 (82-132)||(8146064-8146114)
chr7 (83-137)||(16933657-16933711)
chr7 (83-137)||(16939040-16939094)
chr7 (83-137)||(40036216-40036270)
chr7 (81-131)||(42181693-42181743)
chr7 (83-137)||(43110857-43110911)
chr7 (83-137)||(47139581-47139635)
chr7 (83-137)||(47840554-47840608)
chr7 (81-162)||(14624025-14624106)
chr7 (81-138)||(38237488-38237545)
chr7 (92-137)||(40659460-40659505)
chr7 (98-166)||(31177346-31177414)
[»] chr3 (32 HSPs)
chr3 (81-192)||(37681301-37681412)
chr3 (81-152)||(19578675-19578746)
chr3 (104-210)||(2699525-2699631)
chr3 (81-131)||(17583224-17583274)
chr3 (82-188)||(26513024-26513130)
chr3 (81-162)||(2594462-2594543)
chr3 (81-210)||(8235934-8236063)
chr3 (82-151)||(14771256-14771325)
chr3 (81-193)||(28247262-28247374)
chr3 (78-113)||(41922994-41923029)
chr3 (81-160)||(54114326-54114403)
chr3 (91-153)||(1149688-1149750)
chr3 (83-137)||(20996530-20996584)
chr3 (83-137)||(22762727-22762781)
chr3 (83-137)||(22934575-22934629)
chr3 (80-162)||(37761154-37761236)
chr3 (83-137)||(39721084-39721138)
chr3 (81-210)||(44177012-44177141)
chr3 (81-210)||(44183693-44183822)
chr3 (83-137)||(44762922-44762976)
chr3 (84-118)||(47410943-47410977)
chr3 (84-118)||(47411079-47411113)
chr3 (98-191)||(7982812-7982904)
chr3 (78-111)||(8231687-8231720)
chr3 (81-114)||(26495133-26495166)
chr3 (84-137)||(34804381-34804434)
chr3 (81-149)||(20037602-20037670)
chr3 (141-193)||(21301822-21301874)
chr3 (81-125)||(25441594-25441638)
chr3 (81-125)||(36637174-36637218)
chr3 (88-152)||(42097316-42097380)
chr3 (120-152)||(51103245-51103277)
[»] chr1 (29 HSPs)
chr1 (81-135)||(35632987-35633041)
chr1 (84-210)||(42561653-42561779)
chr1 (81-166)||(4968703-4968788)
chr1 (88-162)||(40780787-40780861)
chr1 (83-152)||(10428263-10428332)
chr1 (82-151)||(14487086-14487155)
chr1 (103-156)||(26768194-26768247)
chr1 (73-190)||(27506509-27506626)
chr1 (80-136)||(11067095-11067151)
chr1 (81-137)||(15881346-15881402)
chr1 (81-137)||(21966246-21966302)
chr1 (81-125)||(42470408-42470452)
chr1 (81-177)||(42560960-42561056)
chr1 (81-152)||(46738117-46738189)
chr1 (86-152)||(6294677-6294743)
chr1 (83-137)||(16033632-16033686)
chr1 (83-137)||(17248758-17248812)
chr1 (83-137)||(17366544-17366598)
chr1 (83-137)||(23911346-23911400)
chr1 (79-209)||(25788642-25788772)
chr1 (83-137)||(33932743-33932797)
chr1 (83-137)||(39879334-39879388)
chr1 (83-137)||(43119309-43119363)
chr1 (83-137)||(49571029-49571083)
chr1 (83-136)||(24473749-24473802)
chr1 (80-133)||(36564079-36564132)
chr1 (81-118)||(49840486-49840523)
chr1 (80-136)||(10427493-10427549)
chr1 (81-125)||(44717366-44717410)
[»] chr6 (24 HSPs)
chr6 (85-189)||(20469581-20469685)
chr6 (81-178)||(4119125-4119222)
chr6 (81-137)||(8866872-8866928)
chr6 (81-137)||(32939274-32939330)
chr6 (80-192)||(34672594-34672706)
chr6 (82-137)||(8872564-8872619)
chr6 (84-162)||(33803894-33803973)
chr6 (83-137)||(5414759-5414813)
chr6 (81-183)||(8478930-8479032)
chr6 (73-111)||(23649888-23649926)
chr6 (81-166)||(32279619-32279704)
chr6 (80-151)||(13704040-13704112)
chr6 (80-162)||(3533205-3533286)
chr6 (83-137)||(6018770-6018824)
chr6 (83-137)||(7540930-7540984)
chr6 (90-192)||(11734171-11734273)
chr6 (83-137)||(18313579-18313633)
chr6 (83-137)||(29043028-29043082)
chr6 (81-162)||(7980484-7980565)
chr6 (73-110)||(16436914-16436951)
chr6 (81-113)||(14356677-14356709)
chr6 (141-209)||(23958739-23958807)
chr6 (81-125)||(32937783-32937827)
chr6 (92-136)||(32938876-32938920)
[»] chr4 (39 HSPs)
chr4 (81-163)||(47393532-47393614)
chr4 (83-152)||(6028628-6028697)
chr4 (73-125)||(1237531-1237583)
chr4 (81-165)||(3092357-3092441)
chr4 (80-152)||(24670081-24670153)
chr4 (82-162)||(47044843-47044923)
chr4 (81-188)||(10214329-10214435)
chr4 (73-154)||(24610612-24610690)
chr4 (81-152)||(55109867-55109938)
chr4 (83-137)||(10582090-10582144)
chr4 (80-121)||(8897412-8897453)
chr4 (81-118)||(20004783-20004820)
chr4 (80-189)||(32820037-32820146)
chr4 (81-162)||(46058383-46058464)
chr4 (81-162)||(48458024-48458105)
chr4 (82-137)||(20681020-20681075)
chr4 (73-132)||(44857455-44857514)
chr4 (81-136)||(56084800-56084855)
chr4 (81-128)||(2766416-2766465)
chr4 (92-162)||(6484712-6484782)
chr4 (83-137)||(17976270-17976324)
chr4 (81-210)||(23315842-23315971)
chr4 (83-137)||(26097848-26097902)
chr4 (81-111)||(26108865-26108895)
chr4 (82-176)||(27746684-27746778)
chr4 (81-166)||(28704036-28704122)
chr4 (83-137)||(39651558-39651612)
chr4 (83-137)||(39657536-39657590)
chr4 (83-137)||(46045992-46046046)
chr4 (83-137)||(51153306-51153360)
chr4 (81-152)||(4605789-4605857)
chr4 (82-162)||(4815870-4815951)
chr4 (103-152)||(12294314-12294363)
chr4 (83-136)||(29099821-29099874)
chr4 (120-209)||(32639961-32640050)
chr4 (81-118)||(47683473-47683510)
chr4 (81-150)||(48171785-48171854)
chr4 (81-117)||(26509624-26509660)
chr4 (81-109)||(31444965-31444993)
[»] scaffold0018 (1 HSPs)
scaffold0018 (81-210)||(36730-36856)
[»] scaffold1793 (1 HSPs)
scaffold1793 (83-137)||(573-627)
[»] scaffold1017 (1 HSPs)
scaffold1017 (81-162)||(2047-2128)
[»] scaffold0003 (1 HSPs)
scaffold0003 (81-166)||(226399-226483)
[»] scaffold1777 (1 HSPs)
scaffold1777 (81-125)||(597-641)
[»] scaffold0025 (1 HSPs)
scaffold0025 (81-137)||(11678-11734)
[»] scaffold0636 (1 HSPs)
scaffold0636 (86-180)||(3335-3429)
[»] scaffold0035 (1 HSPs)
scaffold0035 (81-210)||(81762-81891)
[»] scaffold0013 (1 HSPs)
scaffold0013 (81-147)||(101112-101178)


Alignment Details
Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 6252526 - 6252348
Alignment:
Q  63 ttatttccaaaataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattct---tatatgcaaatttgtttaaaggtgta 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||   ||||||||||||||||||||||||||    
T  6252526 ttatttccaaaataaagaaaatataatataaattcttatatttttttataacagcatcaatataacattctaattatatgcaaatttgtttaaaggtgta 6252427  T
Q  160 attagaaaaatgaaaaattcagccaaaaatctcttattcactttatatatatttttgaaaggtattccatttttatatt 238  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6252426 attagaaaaatgaaaaattcagccaaaaatcccttattcactttatatatatttttgaaaggtattccatttttatatt 6252348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 42522722 - 42522778
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  42522722 aaatataataaaaattcttatattttttaataacaccaacaatataacattattata 42522778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 40483125 - 40483058
Alignment:
Q  85 ataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||||||| || ||| |||||||||||||   ||||||||| ||||||||||||||    
T  40483125 ataatataaattcttatattgttgaatgacaccatcaatatagtattcttataggcaaatttgtttaa 40483058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 14725342 - 14725289
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattctta 135  Q
    ||||||||| |||||||||||||||| |||||||||| |||||| |||||||||    
T  14725342 aatataataaaaattcttatatttttcaataacaccagcaatataacattctta 14725289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 40693304 - 40693341
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacca 118  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40693304 aaatataatataaattcttatattttttaataacacca 40693341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 27598406 - 27598335
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||| |||| |||||||||||||||||||||| |||| |||||| ||| | ||||| | ||||||||||||    
T  27598406 aaataaaataaaaattcttatattttttaataataccaacaatataacactattataagaaaatttgtttaa 27598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 35695322 - 35695243
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||||||||||  ||| ||||| |||  ||||| ||||||  ||||||||||||||||||||||||| ||| |||||    
T  35695322 atataatataaatttatatctttttgaatggcaccagcaatatagcattcttatatgcaaatttgtttaagggtataatt 35695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 835684 - 835634
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||||||||| ||||||||||||||||||||| | |||| |||||    
T  835684 aaatataatataaattattatattttttaataacaccaacgatataacatt 835634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 11487234 - 11487303
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtt 149  Q
    ||||||||||| ||||||| |||||||||||||| || | |||||| ||||| ||||| | |||||||||    
T  11487234 aaaatataataaaaattctgatattttttaataatacgaacaatataacatttttataggaaaatttgtt 11487303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 14861849 - 14861898
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||| ||||||||||||||||||| |||||| |||||| |||||    
T  14861849 aatataatattaattcttatattttttaatgacaccaacaatataacatt 14861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 190
Target Start/End: Complemental strand, 27175234 - 27175125
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||| | |||||||||| |||||||||||||||| |||||| ||||| |||||   ||  |||||||| ||| ||||| ||| ||  |||||| ||    
T  27175234 aaatataacaaaaattcttatcttttttaataacaccaacaatataacattattatagaaaacattgtttaatggtataattggaataacaaaaaatcca 27175135  T
Q  181 gccaaaaatc 190  Q
    ||| ||||||    
T  27175134 gcccaaaatc 27175125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 3955849 - 3955965
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||||||| ||||||| |||| ||  ||| || ||||||  |||| ||| |   ||||||||||||||||  |||| ||| |||||||||| ||    
T  3955849 aaatataatataaactcttatagttttcaacgacatcaacaatatatcattattaaagaaaaatttgtttaaaggtacaattggaataatgaaaaatcca 3955948  T
Q  181 gccaaaaatctcttatt 197  Q
     || |||||||||||||    
T  3955949 acccaaaatctcttatt 3955965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 39850465 - 39850393
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaa 153  Q
    |||||||||||||||||||||  |||||||||||   | |||||| ||||| |||||  ||||||||||||||    
T  39850465 aaatataatataaattcttatcatttttaataactttaacaatataacattattatagacaaatttgtttaaa 39850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 13998626 - 13998697
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||| | ||||| |||| | |||||||||||||| |||||| ||| | ||||||| ||||||||||||    
T  13998626 aaatataacaaaaattattatctattttaataacaccaacaatataacactattatatgaaaatttgtttaa 13998697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 19840398 - 19840291
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||| |||||||||||||| | |||| |  |||||||| | |||| ||| ||||| ||| ||| || || || || |||||||    
T  19840398 aaatataataaaaattcttatcttttttaataacacaaacaatgtatcattcttaaaagcaagtttatttaagggtataactaaaataaagagaaattca 19840299  T
Q  181 gccaaaaa 188  Q
    ||| ||||    
T  19840298 gcccaaaa 19840291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 43530534 - 43530629
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaa 176  Q
    ||||| |||||||||||| || ||||| ||| |  ||| |||||| ||||||||||| || |||||||| || ||| ||||| ||| |||||||||    
T  43530534 aaataaaatataaattctcatctttttcaatgatcccaacaatataacattcttataggccaatttgttgaagggtataattggaagaatgaaaaa 43530629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 2463467 - 2463521
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  2463467 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 2463521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 3246651 - 3246705
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  3246651 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 3246705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 11832487 - 11832445
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||    
T  11832487 atataatataaattcttatcttttttaatgacaccaacaatat 11832445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 22012375 - 22012445
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||| |||||||||||||| | |||||||  ||| ||||| | |||||||||||| ||| |||||    
T  22012375 aaattcttatcttttttaataacacaaacaatatgtaattattataagaaaatttgtttaacggtataatt 22012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 28727900 - 28727987
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||| |||||||||||| |  ||||| ||||| ||| |||||| |||||| |||||||| |  |||||||||||||| ||| |||||    
T  28727900 aataaagtaaatataatataca--cttatgtttttcaatgacaccaacaatataacattctttttggcaaatttgtttaagggtataatt 28727987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 28746570 - 28746516
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  28746570 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 28746516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 29874918 - 29874864
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  29874918 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 29874864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 36242150 - 36242204
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  36242150 atataatataaattcttatgtttttaaatgacaccaaaaatatgatattcttata 36242204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 41879797 - 41879926
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  41879797 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 41879896  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  41879897 agcccaaagtctc-tattcccttcatatata 41879926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 3165690 - 3165645
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacacca 118  Q
    |||| ||||||||||| || |||| |||||||||||||||||||||    
T  3165690 aatatagaaaatataacatgaatttttatattttttaataacacca 3165645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 3945184 - 3945249
Alignment:
Q  87 aatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||| ||||||||||||||||| |||||  ||| || ||||| |||||  |||||||||||||    
T  3945184 aatataagttcttatattttttaatgacacctacaaaataacattgttatagtcaaatttgtttaa 3945249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 37516893 - 37516930
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacca 118  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  37516893 aaatataatataaattcttatatttttgaatgacacca 37516930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 39178135 - 39178220
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    |||||||| | ||||| |||| | ||||||||||| || |||||| ||||| ||||| | |||||| ||||| ||| |||||||||    
T  39178135 aaatataacaaaaattattatctattttaataacatcaacaatataacattattataggaaaatttatttaagggtataattagaa 39178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 39585101 - 39585056
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||| || ||||||||||||||||||||||| ||||| |||||    
T  39585101 aaattctcatcttttttaataacaccatcaatataacattattata 39585056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 14930762 - 14930730
Alignment:
Q  81 aaatataatataaattcttatattttttaataa 113  Q
    |||||||||| ||||||||||||||||||||||    
T  14930762 aaatataatacaaattcttatattttttaataa 14930730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 31202077 - 31202017
Alignment:
Q  103 ttttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatta 163  Q
    |||||||||||||||| | |||| ||||| ||||| | |||||||||||| ||| ||||||    
T  31202077 ttttttaataacaccaacgatataacattgttataagaaaatttgtttaagggtataatta 31202017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 32654039 - 32654067
Alignment:
Q  81 aaatataatataaattcttatatttttta 109  Q
    |||||||||||||||||||||||||||||    
T  32654039 aaatataatataaattcttatatttttta 32654067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 35627245 - 35627281
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacac 116  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  35627245 aaaatataatataaattcttattttttttaatgacac 35627281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 36629717 - 36629689
Alignment:
Q  85 ataatataaattcttatattttttaataa 113  Q
    |||||||||||||||||||||||||||||    
T  36629717 ataatataaattcttatattttttaataa 36629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 23914836 - 23914715
Alignment:
Q  85 ataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagcca 184  Q
    ||||||||||||||||||||||| ||||  |||| |||||| ||||||||||| ||||||||||||||  || ||||| ||| |||||||||| ||| |     
T  23914836 ataatataaattcttatatttttcaatattaccaacaatataacattcttataggcaaatttgtttaagagtataattggaataatgaaaaatccagtcc 23914737  T
Q  185 aaaatctcttattcactttata 206  Q
    |||||| | ||||| |||||||    
T  23914736 aaaatcccatattccctttata 23914715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 23914641 - 23914513
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    ||||||||||||||||||||| ||||| |||||||| | |||||| |||||||||||  ||||||||||||| ||| ||||| | | ||||||||   |     
T  23914641 aaatataatataaattcttatctttttcaataacacaaacaatataacattcttatagccaaatttgtttaagggtataatttgcataatgaaaacaccg 23914542  T
Q  181 gccaaaaatctcttattcactttatatat 209  Q
    ||| |||||| | ||||| ||||||||||    
T  23914541 gcccaaaatcccctattccctttatatat 23914513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 35468789 - 35468717
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaa 153  Q
    ||||||||||||||||||||||||||||| | |||||| ||| || |||||||||||  |||||||| |||||    
T  35468789 aaatataatataaattcttatattttttattgacaccaacaaaataacattcttatagtcaaatttgcttaaa 35468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 744911 - 744982
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||| |||| ||||| |||||||||| |||||| |||||||||||  ||||||| |||||    
T  744911 aaatataatataaatttttatctttttaaataacaccaacaatataacattcttatagacaaatttatttaa 744982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30675544 - 30675594
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  30675544 aaatataatataaactcttatattttttaataacaccaacaatataacatt 30675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 21384663 - 21384740
Alignment:
Q  85 ataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||| ||||||||||||||||||| ||||||| ||||||  |||| ||||||| ||| |||||||| ||| |||||    
T  21384663 ataataaaaattcttatattttttaaaaacaccaacaatatagcattattatatgaaaaattgtttaagggtataatt 21384740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 11538439 - 11538383
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||| | |||||||||| |||||||||||||||| |||||||||||| |||||    
T  11538439 aaatataacaaaaattcttatcttttttaataacaccaacaatatgacattattata 11538383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 13277995 - 13277888
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcag 181  Q
    ||||||||||||||| |||| ||||  |||||||| | |||||| ||||| ||||| |||||||| ||||| | | |||||  || ||||||||||||||    
T  13277995 aatataatataaattattatcttttc-aataacactaacaatataacattgttataggcaaatttatttaaggatataattgaaataatgaaaaattcag 13277897  T
Q  182 ccaaaaatc 190  Q
    || ||||||    
T  13277896 cccaaaatc 13277888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 41860288 - 41860365
Alignment:
Q  85 ataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||||||||||||| ||||| ||  ||| || ||||||  ||||||||||||||||||| | ||||||| |||||    
T  41860288 ataatataaattcttatctttttaaaggacatcaacaatatagcattcttatatgcaaatttatataaaggtataatt 41860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 6675006 - 6674931
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggt 156  Q
    ||||||||||||||||||||||||||| ||||  | || |||||  ||| ||||||| |||| ||| |||||||||    
T  6675006 aaatataatataaattcttatatttttcaatacaatcaacaatacaacactcttataggcaactttctttaaaggt 6674931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 26966407 - 26966518
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||||||||||||||  ||||||||| ||||| |||||| |||||  ||||      ||||||||| ||| ||||| |||  || |||||||||    
T  26966407 aaatataatataaattcttatcatttttaatatcaccaacaatataacattaatataaatttttttgtttaagggtataattggaattataaaaaattca 26966506  T
Q  181 gccaaaaatctc 192  Q
    | ||||||||||    
T  26966507 gtcaaaaatctc 26966518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 1693119 - 1693065
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||  ||||||  ||||||| |||||||||    
T  1693119 atataatataaattcttatatttttcaaagacaccaaaaatatgatattcttata 1693065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 3079541 - 3079595
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  3079541 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 3079595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 9546131 - 9546165
Alignment:
Q  81 aaatataatataaattcttatattttttaataaca 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  9546131 aaatataatataaattcttatatttttcaataaca 9546165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 10120435 - 10120489
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  10120435 atataatataaattcttatgtttttaaatgacaccaaaaatatgatattcttata 10120489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 13552153 - 13552099
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  13552153 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 13552099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 16568310 - 16568200
Alignment:
Q  98 ttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatctcttatt 197  Q
    |||||||||||||||||| || |||||| |||||  ||||   |||||| ||||||||| |||||| || ||| ||||| ||  || |||||||| ||||    
T  16568310 ttatattttttaataacatcaacaatataacattagtatagaaaaatttatttaaaggtataattaaaataataaaaaaatctccctaaaatctcatatt 16568211  T
Q  198 cactttatata 208  Q
    |  ||||||||    
T  16568210 ctttttatata 16568200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 22077982 - 22078036
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  22077982 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 22078036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 29353776 - 29353810
Alignment:
Q  81 aaatataatataaattcttatattttttaataaca 115  Q
    ||||||||||||||||||| |||||||||||||||    
T  29353776 aaatataatataaattcttgtattttttaataaca 29353810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 34118958 - 34119008
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    ||||||||||||||| |||||||||||||||| ||| | |||||| |||||    
T  34118958 aaatataatataaatccttatattttttaataccactaacaatataacatt 34119008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 34423909 - 34423875
Alignment:
Q  81 aaatataatataaattcttatattttttaataaca 115  Q
    ||||||||||||||||||||| |||||||||||||    
T  34423909 aaatataatataaattcttatcttttttaataaca 34423875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38709530 - 38709584
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  38709530 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 38709584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38878963 - 38879017
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  38878963 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 38879017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 40202054 - 40202108
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  40202054 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 40202108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 41452657 - 41452711
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  41452657 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 41452711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 352433 - 352320
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaattt-gtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    ||||||||||||||| ||||| ||||| |||| ||||| |||||| |||||  |||| | ||||||  ||||| ||| ||||| |||  || |||||||     
T  352433 aaatataatataaatccttatctttttcaataccaccaacaatataacattaatataggaaaatttattttaagggtataattggaattataaaaaattt 352334  T
Q  180 agccaaaaatctct 193  Q
    |||| |||||||||    
T  352333 agcccaaaatctct 352320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 14690108 - 14690188
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||| ||| |||| | |||||||||||||||| |||||| ||||| ||||| | |||| ||||||| ||| |||||    
T  14690108 aaatataataaaaaatctttt-ttttttaataacaccaacaatataacattattataggaaaatatgtttaagggtataatt 14690188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 10886613 - 10886557
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||| |||| |||||||||| ||||||||||||| || |||||| ||||| |||||    
T  10886613 aaataaaataaaaattcttatcttttttaataacatcaacaatataacattattata 10886557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 7975945 - 7976011
Alignment:
Q  96 tcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||| |||||    
T  7975945 tcttatattttttaataacaccaacaatatgacattattataagaaaatttgtttaaaggtataatt 7976011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 15920126 - 15920025
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||| ||||| |||||||||| |||||| ||||| ||||| | |||||||||||| ||| ||||||||| ||  |||||||||    
T  15920126 aaatataataaaaattcttatcttttt-aataacaccaacaatataacattattataagaaaatttgtttaagggtataattagaataacaaaaaattca 15920028  T
Q  181 gcc 183  Q
    |||    
T  15920027 gcc 15920025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 4438598 - 4438542
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||| ||||||||| | |||| |||||| |||||||||||    
T  4438598 aaatataatataaattcttatcttttttaatgataccaacaatataacattcttata 4438542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 13206130 - 13206201
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||| || |||||||||| ||||| | |||||||| |||||| ||||||||| | ||||||||||||||    
T  13206130 aaatatattaaaaattcttatctttttcattaacaccaacaatataacattcttaaaagcaaatttgtttaa 13206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 19341915 - 19341860
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  19341915 aatataataaaaattcttatattttttaataacgccaacaatataacattattata 19341860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 11420424 - 11420505
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||||||||||||||||| ||||| || ||||||| ||| || | |||||||||  ||||||| |||||| || |||||    
T  11420424 aaatataatataaattcttatctttttgaacaacaccaacaaaataatattcttatagtcaaatttatttaaatgtataatt 11420505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 35173369 - 35173462
Alignment:
Q  95 ttcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa-aaatgaaaaattcagccaaaa 187  Q
    ||||||| | ||||||||||| || |||||| ||||||||||| | | |||||||||| ||| ||||||||| |||  |||||| |||||||||    
T  35173369 ttcttatctattttaataacatcaacaatataacattcttataggaacatttgtttaagggtataattagaataaaaaaaaaatacagccaaaa 35173462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 4205161 - 4205245
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattaga 165  Q
    ||||||||||||||||| ||| |||||||||| ||| | |||||| |||||  |||| | ||||||||||||  || ||||||||    
T  4205161 aaatataatataaattcctatcttttttaatatcacgaacaatataacattaatataagaaaatttgtttaagagtataattaga 4205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 23038552 - 23038508
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||    
T  23038552 aaatataatataaattcttaccttttttaataacaccaacaatat 23038508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 111
Target Start/End: Original strand, 4437486 - 4437525
Alignment:
Q  72 aaataaagaaaatataatataaattcttatattttttaat 111  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  4437486 aaatatagcaaatataatataaattcttatattttttaat 4437525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 38137970 - 38137915
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  38137970 aatataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 38137915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 1657974 - 1657845
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  1657974 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 1657875  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  1657874 agcccaaagtctc-tattcccttcatatata 1657845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 2442309 - 2442259
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||||||||| |||| ||||||||||||| || |||||| |||||    
T  2442309 aaatataatataaatttttatcttttttaataacatcaacaatataacatt 2442259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 6746981 - 6747035
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  6746981 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 6747035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 11579015 - 11579069
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  11579015 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 11579069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 12261725 - 12261671
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  12261725 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 12261671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 33848940 - 33848886
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  33848940 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 33848886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 34103498 - 34103436
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaa 143  Q
    |||||||||||||||| |||||||||||||||| | || |||||  ||||| ||||| |||||    
T  34103498 aaatataatataaatttttatattttttaataatagcaacaataaaacattattataagcaaa 34103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 36801942 - 36801828
Alignment:
Q  80 aaaatataatataaattctta-tattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaatt 178  Q
    ||||||||||||||||||||| | |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || |||||||    
T  36801942 aaaatataatataaattcttatttttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaatt 36801843  T
Q  179 cagccaaaaatctct 193  Q
    ||||| ||| |||||    
T  36801842 cagcccaaagtctct 36801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38139135 - 38139189
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  38139135 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 38139189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 38909109 - 38909163
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  38909109 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 38909163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 39525275 - 39525329
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  39525275 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 39525329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 41526137 - 41526191
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  41526137 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 41526191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 6657236 - 6657289
Alignment:
Q  84 tataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  6657236 tataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 6657289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 6737638 - 6737691
Alignment:
Q  84 tataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  6737638 tataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 6737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 11439069 - 11439154
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    |||||||||||||| | ||||| ||||||| ||| |||  ||||| | ||| ||||| | ||||||||||||| || |||||||||    
T  11439069 aaatataatataaaattttataatttttaacaacgccaaaaatataatattattataagaaaatttgtttaaaagtataattagaa 11439154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 11912092 - 11912047
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||| |||||||||||||||| ||||||||||||| || ||||||    
T  11912092 aaaatgtaatataaattcttatcttttttaataacatcaacaatat 11912047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 34882350 - 34882270
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||||| ||||  |||| ||| ||| || |||| | |||||||||| ||||| ||||||||||||| |||||    
T  34882350 aaatataatataaattattatcattttgaatgacatcaacaatgtaacattcttat-tgcaagtttgtttaaaggtataatt 34882270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 45139301 - 45139248
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| ||||||||    
T  45139301 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttat 45139248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 3539364 - 3539284
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||| | |||||||||| ||| ||||||||  || |||||| || || ||||||| |||||||||||| ||| |||||    
T  3539364 aatataaaaaaaattcttatctttattaataacctcaacaatataacgttattatatgaaaatttgtttaagggtataatt 3539284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 40038900 - 40038964
Alignment:
Q  88 atataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||||||||||  |||||||| |||||| || ||| ||| | ||||||| ||||||||||||    
T  40038900 atataaattcttatcatttttaatgacaccaacattataacagttttatatgtaaatttgtttaa 40038964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 40721300 - 40721264
Alignment:
Q  82 aatataatataaattcttatattttttaataacacca 118  Q
    |||||||||||||||||||  ||||||||||||||||    
T  40721300 aatataatataaattcttaccttttttaataacacca 40721264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 41790317 - 41790361
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    |||||| ||||||||||||||  ||||||||||||||| ||||||    
T  41790317 aaatatgatataaattcttatcatttttaataacaccaacaatat 41790361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 47437806 - 47437882
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggt 156  Q
    |||||||||||||||||||||| |||||||||||||||| ||| || | |||||||||  ||||| |||||||||||    
T  47437806 aaaatataatataaattcttatcttttttaataacaccaacaaaatcaaattcttatagtcaaatatgtttaaaggt 47437882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 1292083 - 1292154
Alignment:
Q  78 agaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtt 149  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||  |||||||||| | |||||||||    
T  1292083 agaaaatataatataaattcttatcttttttaatgacaccaacaatatagcattcttataagtaaatttgtt 1292154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 10039414 - 10039493
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||| ||||||||||||||||||| ||||||||| |||| || ||| ||| || |||| ||||||||||| |||||||||    
T  10039414 aatatagaaaatataatataaatttttatattttctaatgacgccaacaaaataacatgcttatatgcaagtttgtttaa 10039493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 32358919 - 32358849
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgttta 151  Q
    ||||||||||||||||||||| ||||| ||| ||| ||  ||||| ||||| |||||||||||||||||||    
T  32358919 aaatataatataaattcttatctttttcaatgacaacaaaaatataacatttttatatgcaaatttgttta 32358849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 43358814 - 43358729
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||| || ||||| |||||  ||||||| |||||| || |||||||||    
T  43358814 aaatataatataaattcttatctttttaaattacaccaacaaaataacatttttatagtcaaatttatttaaaagtataattagaa 43358729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 35338418 - 35338366
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattct 133  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||| |||||||    
T  35338418 aaatataatataaattcttatcttttttaatgacaccaacaatataacattct 35338366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 10039626 - 10039705
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||| ||||||||||||||||||| |||| |||| |||| |||||| ||| || |||| |||||| |||| |||||||||    
T  10039626 aatatagaaaatataatataaatttttatcttttctaatgacaccaacaaaataacatgcttataagcaagtttgtttaa 10039705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 4492684 - 4492630
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||||||||||  ||||||| |||||||||    
T  4492684 atataatataaattcttatctttttaaataacaccaaaaatatgatattcttata 4492630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 29285635 - 29285585
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  29285635 aaatataatataaattcttatgtttttcaataacaccaacaatataacatt 29285585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 44410537 - 44410575
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacacca 118  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44410537 aaaatataatataaattcttatattttttaatgacacca 44410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 40358528 - 40358459
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaat 161  Q
    |||||||||| ||||||||||||| || |||||| ||||| ||||| | |||||||||||| ||| ||||    
T  40358528 aaattcttatcttttttaataacatcaacaatataacattgttataggaaaatttgtttaagggtataat 40358459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 10040844 - 10040924
Alignment:
Q  103 ttttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagcc 183  Q
    ||||| |||||||||| |||||| ||||| ||||| | |||||||||||| ||| |||||||||  |  ||||||||||||    
T  10040844 tttttcaataacaccaacaatataacatttttataggaaaatttgtttaagggtataattagaattacaaaaaattcagcc 10040924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 39617440 - 39617376
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggt 156  Q
    ||||||||||||||||||||||||||| | |||| ||||| | |||   ||||||||||||||||    
T  39617440 aaattcttatattttttaataacaccaacgatataacattatcatagaaaaatttgtttaaaggt 39617376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 9059314 - 9059385
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||  |||| |||||||||||||||| |||||| |||||  ||||   ||||||||||||    
T  9059314 aaatataatataaatctttatcttttttaataacaccaacaatataacattaatatagaaaaatttgtttaa 9059385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 5096512 - 5096641
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  5096512 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 5096611  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  5096612 agcccaaagtctc-tattcccttcatatata 5096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 8146114 - 8146064
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattc 132  Q
    |||||||||||| ||||||| ||||||||| |||||| |||||| ||||||    
T  8146114 aatataatataatttcttatcttttttaatgacaccaacaatattacattc 8146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 16933711 - 16933657
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  16933711 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 16933657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 16939094 - 16939040
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  16939094 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 16939040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 40036270 - 40036216
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  40036270 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 40036216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 42181743 - 42181693
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||||||||| |||||||| |||||||||| | |||||| |||||    
T  42181743 aaatataatataaatttttatatttattaataacactaacaatataacatt 42181693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 43110857 - 43110911
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  43110857 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 43110911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 47139581 - 47139635
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  47139581 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 47139635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 47840554 - 47840608
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  47840554 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 47840608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 14624025 - 14624106
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||||| |||| |||||||| | ||||| |||||  |||||  |||||| ||||||| |||| ||| |||||    
T  14624025 aaatataatataaatttttatcttttttaacaccaccaacaatacaacattaatatatgaaaatttgattaagggtataatt 14624106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 38237488 - 38237545
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatat 138  Q
    ||||||||||||||||||||| ||||| ||| |||||| || ||| ||||| ||||||    
T  38237488 aaatataatataaattcttatctttttcaatgacaccaacagtataacatttttatat 38237545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 40659460 - 40659505
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||| |||||||||||||||| |||||| ||||| |||||    
T  40659460 aaattcttatcttttttaataacaccaacaatataacattattata 40659505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 31177346 - 31177414
Alignment:
Q  98 ttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    |||| |||||||||||||||| |  ||| ||||| ||||| | ||||||||||| |||| |||||||||    
T  31177346 ttatcttttttaataacaccaacggtataacattattataagaaaatttgtttataggtataattagaa 31177414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 37681412 - 37681301
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||||| |||||  |||| | |||||||||||| ||| |||||  ||  || |||||||||    
T  37681412 aaatataatataaatccttatcttttttaataccaccaacaatataacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattca 37681313  T
Q  181 gccaaaaatctc 192  Q
    ||| ||||||||    
T  37681312 gcccaaaatctc 37681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 19578746 - 19578675
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||| ||||| ||||  | ||||||||||||    
T  19578746 aaatataataaaaactcttatattttttaataacaccaacaatataacattattattggaaaatttgtttaa 19578675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 2699525 - 2699631
Alignment:
Q  104 tttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatctcttattcacttt 203  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||| | ||| ||| |||||  || ||||||||| ||||||||||||  ||||||  ||||    
T  2699525 tttttaataacaccaacaatataacattattatataaaaatttatataagggtataattgaaataatgaaaaagtcagccaaaaatgccttattttcttt 2699624  T
Q  204 atatata 210  Q
    |||||||    
T  2699625 atatata 2699631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 17583274 - 17583224
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacatt 131  Q
    |||||||||| |||||||||| |||||||||||||||| |||||| |||||    
T  17583274 aaatataataaaaattcttatcttttttaataacaccaacaatataacatt 17583224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 26513024 - 26513130
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcag 181  Q
    ||||||||| |||||||||| |||||| |||| || | |||||| ||||||||| |   |||||||||||||||| || ||  || ||||||||||| ||    
T  26513024 aatataataaaaattcttatcttttttgataaaacgaacaatataacattcttaaaaataaatttgtttaaaggtatagttgaaataatgaaaaattaag 26513123  T
Q  182 ccaaaaa 188  Q
    || ||||    
T  26513124 cctaaaa 26513130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 2594543 - 2594462
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||| || ||||| ||||   |||||||| |||| |||||||||    
T  2594543 aaatataatataaattcttatctttttgaatgacaccagcaaaataacattgttatggtcaaatttgattaagggtgtaatt 2594462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 8236063 - 8235934
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||| |||| |||| ||||||  ||||| ||||  || |||| ||||||||  || ||| |||||  || ||| ||||| |||    
T  8236063 aaatataatacaaattcttatcttttgtaatgacaccaataatataacatcattgtatgaaaatttgtccaatggtataattgaaataataaaaaagtca 8235964  T
Q  181 gccaaaaatctcttattcactttatatata 210  Q
     || ||||||| |||||| |||||||||||    
T  8235963 acccaaaatctattattctctttatatata 8235934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 14771256 - 14771325
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgttta 151  Q
    ||||||||| |||||||||||||||||| |||| ||| ||||||  |||| ||||| | |||||||||||    
T  14771256 aatataataaaaattcttatattttttagtaacgccaacaatatagcattattataagaaaatttgttta 14771325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 28247374 - 28247262
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||||||||| ||||  |||| ||| ||| || | |||| ||||  ||||||| |||||||||||| ||| ||||| ||| ||| |||||| ||    
T  28247374 aaatataatataaatttttatcattttcaatgacatcaactatataacatcattatatgaaaatttgtttaagggtataattggaacaataaaaaatcca 28247275  T
Q  181 gccaaaaatctct 193  Q
     || |||||||||    
T  28247274 acccaaaatctct 28247262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 41923029 - 41922994
Alignment:
Q  78 agaaaatataatataaattcttatattttttaataa 113  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41923029 agaaaatataacataaattcttatattttttaataa 41922994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 54114403 - 54114326
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaa 160  Q
    ||||||||||||||||||||| ||||||||||||| ||  ||||| |||||| |||| |||||||||  ||| |||||||    
T  54114403 aaatataatataaattcttat-ttttttaataaca-cactaatataacattcatataggcaaatttgcataagggtgtaa 54114326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 1149750 - 1149688
Alignment:
Q  91 taaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaa 153  Q
    ||||||||||| ||||| |||||||||| || ||| ||||| ||| | |||||||||||||||    
T  1149750 taaattcttatttttttcaataacaccaacattataacattgttacaggcaaatttgtttaaa 1149688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 20996584 - 20996530
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||| ||| ||  ||||||| |||||||||    
T  20996584 atataatataaattcttatatttttaaatgacatcaaaaatatgatattcttata 20996530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 22762781 - 22762727
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||  ||||||  ||||||| |||||||||    
T  22762781 atataatataaattcttatatttttcaaagacaccaaaaatatgatattcttata 22762727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 22934575 - 22934629
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| |||||||||||||| |  ||||||  |||||||||    
T  22934575 atataatataaattcttatcttttttaataacacaaaaaatatggtattcttata 22934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 37761236 - 37761154
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||| |||||||||||||| ||||| ||||||||||  || || |||||||||||  |||| ||| ||||| || |||||    
T  37761236 aaaatattatataaattcttatctttttaaataacaccagtaaaataacattcttataatcaaaattgcttaaaagtataatt 37761154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 39721084 - 39721138
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  39721084 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 39721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 44177012 - 44177141
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  44177012 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 44177111  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  44177112 agcccaaagtctc-tattcccttcatatata 44177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 44183693 - 44183822
Alignment:
Q  81 aaatataatataaattcttatatttttt-aataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||| |||||||||| |||||| |||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||| ||  || ||||||||    
T  44183693 aaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattaaaattataaaaaattc 44183792  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  44183793 agcccaaactctc-tattcccttcatatata 44183822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 44762976 - 44762922
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  44762976 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 44762922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 47410977 - 47410943
Alignment:
Q  84 tataatataaattcttatattttttaataacacca 118  Q
    |||||||||||||||||| ||||||||||||||||    
T  47410977 tataatataaattcttatcttttttaataacacca 47410943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 47411113 - 47411079
Alignment:
Q  84 tataatataaattcttatattttttaataacacca 118  Q
    |||||||||||||||||| ||||||||||||||||    
T  47411113 tataatataaattcttatcttttttaataacacca 47411079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 7982812 - 7982904
Alignment:
Q  98 ttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatct 191  Q
    |||| |||||||||||||||| |||||| | ||| || |||| |||||||||||||||| ||||| ||| ||  ||||  |||||| |||||||    
T  7982812 ttatcttttttaataacaccaacaatataatattatt-tatgaaaatttgtttaaaggtataattggaataacaaaaatgtcagcccaaaatct 7982904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 8231687 - 8231720
Alignment:
Q  78 agaaaatataatataaattcttatattttttaat 111  Q
    |||||||||||||||||||||||| |||||||||    
T  8231687 agaaaatataatataaattcttatcttttttaat 8231720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 26495133 - 26495166
Alignment:
Q  81 aaatataatataaattcttatattttttaataac 114  Q
    ||||||||||||||||||||||||||| ||||||    
T  26495133 aaatataatataaattcttatatttttcaataac 26495166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 34804434 - 34804381
Alignment:
Q  84 tataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||| |||| ||||||||||||||||||||| || |||||| ||||| |||||    
T  34804434 tataaaataagttcttatattttttaataacatcaacaatataacattattata 34804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 20037602 - 20037670
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtt 149  Q
    ||||||||||  ||||||||| |||||||||||||||| ||| ||  |||| ||| | |||||||||||    
T  20037602 aaatataataataattcttatcttttttaataacaccaacaaaatagcatttttaaaagcaaatttgtt 20037670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 21301822 - 21301874
Alignment:
Q  141 aaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatctct 193  Q
    |||||||||||| ||| |||||||||  || |||||||||||| |||||||||    
T  21301822 aaatttgtttaagggtataattagaattataaaaaattcagcccaaaatctct 21301874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 25441594 - 25441638
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    |||||||||||||||| |||| |||||||||| ||||| ||||||    
T  25441594 aaatataatataaattattatcttttttaatatcaccaacaatat 25441638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 36637218 - 36637174
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    |||||||||| |||||||||| |||||||||||||| | ||||||    
T  36637218 aaatataataaaaattcttatcttttttaataacacaaacaatat 36637174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 42097316 - 42097380
Alignment:
Q  88 atataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||| ||| ||| |||||||||  |||| | ||| ||||||| ||||||||||||||    
T  42097316 atataaattcttttatgtttgaataacaccgacaatgtaacactcttataagcaaatttgtttaa 42097380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 51103245 - 51103277
Alignment:
Q  120 caatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||| ||||||||||||||||||||||||||    
T  51103245 caatataacattcttatatgcaaatttgtttaa 51103277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 35633041 - 35632987
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattctta 135  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |||||||||    
T  35633041 aaatataatataaattcttatattttttaataacaccaacaaaataacattctta 35632987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 42561653 - 42561779
Alignment:
Q  84 tataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagcc 183  Q
    |||||||||| |||||||  |||||||| | |||| |||||| ||||| |||||   ||||||||| || ||  ||||| ||| ||||||||| ||||||    
T  42561653 tataatataatttcttatgctttttaatgaaaccaacaatataacattgttatagaaaaatttgttgaagggaataattggaataatgaaaaagtcagcc 42561752  T
Q  184 aaaaatctcttattcactttatatata 210  Q
     |||||||||||||  |||||||||||    
T  42561753 caaaatctcttattttctttatatata 42561779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 4968703 - 4968788
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    |||||||| | |||||||||| | | |||||||||||| |||||| ||||| ||||| | ||||||||||||| || |||||||||    
T  4968703 aaatataacaaaaattcttatctatcttaataacaccaacaatataacattattataagaaaatttgtttaaaagtataattagaa 4968788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 40780861 - 40780787
Alignment:
Q  88 atataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||| |||||||||||||||| |||||| | ||| |||||   |||||| ||||||| |||||||    
T  40780861 atataaattcttatcttttttaataacaccaacaatataatattattatagaaaaatttatttaaagatgtaatt 40780787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 10428263 - 10428332
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||| |||||||||| ||||| || ||||||| ||||||  |||||||| | ||||||||||||||    
T  10428263 atataataaaaattcttatctttttcaagaacaccaacaatatagcattcttaaaagcaaatttgtttaa 10428332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 14487086 - 14487155
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgttta 151  Q
    ||||||| | ||||||||||  ||||||||||||||| |||||| ||||| ||||||  |||||||||||    
T  14487086 aatataacaaaaattcttatcctttttaataacaccaacaatataacattattatataaaaatttgttta 14487155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 26768194 - 26768247
Alignment:
Q  103 ttttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggt 156  Q
    |||||||||||||||| |||||| ||||| ||||| | ||||||||||||||||    
T  26768194 ttttttaataacaccaccaatataacattgttataggaaaatttgtttaaaggt 26768247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 27506626 - 27506509
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattc--ttatatgcaaatttgtttaaaggtgtaattagaaaaat 170  Q
    |||| |||||||||||||||| ||||||||||||| ||  |||| | |||||| ||||||  ||||| | |||||| ||||| ||| |||||  ||||||    
T  27506626 aatatagaaaatataatataagttcttatatttttgaacgacactaacaatataacattcttttatacgtaaatttatttaagggtataatt--aaaaat 27506529  T
Q  171 gaaaaattcagccaaaaatc 190  Q
    ||||||| || || ||||||    
T  27506528 gaaaaatgcaccccaaaatc 27506509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 11067095 - 11067151
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    ||||||||| | |||||||||| |||||||||||||||| |||||| ||||| ||||    
T  11067095 aaaatataacaaaaattcttatcttttttaataacaccaacaatataacattattat 11067151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 15881402 - 15881346
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||| |||||||||||||||| || |||||| |||||| ||||| |||||    
T  15881402 aaatataatattaattcttatatttttttatgacaccaacaatataacattattata 15881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 21966302 - 21966246
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  21966302 aaatataatataaattcttatctttttgaatgacaccaaaaatatgatattcttata 21966246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 42470408 - 42470452
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||    
T  42470408 aaatataatataaattcttatattttttaatgacaacaacaatat 42470452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 42560960 - 42561056
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaat 177  Q
    |||||||||||||| |||| |  |||| ||| |||||| |||||| ||||| |||||   |||||||||||| ||| ||||| ||| ||||||||||    
T  42560960 aaatataatataaactcttgtcattttcaatgacaccaacaatataacattattatagaaaaatttgtttaagggtataattggaataatgaaaaat 42561056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 46738117 - 46738189
Alignment:
Q  81 aaatataatataaattcttatat-tttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||||||||||||||||| | ||||||||||||  |  ||||| ||||||||||| | ||||||||||||    
T  46738117 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 46738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 6294677 - 6294743
Alignment:
Q  86 taatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||||||||||| | |||| | |||||| | ||||||||| || ||||| |||||    
T  6294677 taatataaattcttatattttttattgacactaacaatattatattcttataggcgaatttatttaa 6294743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 16033686 - 16033632
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||  |||||||||    
T  16033686 atataatataaattcttatattttttaaagacaccaaaaatatggtattcttata 16033632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 17248758 - 17248812
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||||||||||  ||||||  |||||||||    
T  17248758 atataatataaattcttatctttttaaataacaccaaaaatatggtattcttata 17248812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 17366598 - 17366544
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  17366598 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 17366544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 23911400 - 23911346
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||  ||||||  ||||||| |||||||||    
T  23911400 atataatataaattcttatatttttcaaagacaccaaaaatatgatattcttata 23911346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 25788772 - 25788642
Alignment:
Q  79 gaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaatt 178  Q
    |||||||||||||||| ||||||  |||| | | |||||| |||||| | ||| |||||   |||||||||||||||| ||  | ||| |||  |||||     
T  25788772 gaaaatataatataaactcttatcattttaattgacaccaacaatataatattattatagaaaaatttgtttaaaggtatatctggaataatacaaaatc 25788673  T
Q  179 cagccaaaaatctcttattcactttatatat 209  Q
    || || |||||||| |||| |||||||||||    
T  25788672 caacccaaaatctcatatttactttatatat 25788642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 33932743 - 33932797
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  33932743 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 33932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 39879388 - 39879334
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  39879388 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 39879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 43119363 - 43119309
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||| || |||  ||||||| |||||||||    
T  43119363 atataatataaattcttatatttttaaatgacgccaaaaatatgatattcttata 43119309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 49571029 - 49571083
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  49571029 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 49571083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 24473802 - 24473749
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| ||||||||    
T  24473802 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttat 24473749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 36564132 - 36564079
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattct 133  Q
    |||||||||||||||||||||| ||||||||| ||| || ||| || |||||||    
T  36564132 aaaatataatataaattcttattttttttaatgacatcaacaaaataacattct 36564079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 49840486 - 49840523
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacca 118  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  49840486 aaatataatatacattcttatattttttaatgacacca 49840523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 10427549 - 10427493
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    |||||||||||||||||||||| ||||||||| ||| || ||| ||  |||||||||    
T  10427549 aaaatataatataaattcttattttttttaatgacatcaacaaaatagcattcttat 10427493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 44717366 - 44717410
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||| |||| |||||||||| |||||||||||||||| ||||||    
T  44717366 aaataaaataaaaattcttatcttttttaataacaccaacaatat 44717410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 20469581 - 20469685
Alignment:
Q  85 ataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagcca 184  Q
    ||||||||||| ||||| |||||||||| ||||| |||||| |||||  |||| | |||||||||||| ||| ||||| |||  || ||||||||||||     
T  20469581 ataatataaatccttatcttttttaataccaccaacaatataacattaatataggaaaatttgtttaagggtataattggaattataaaaaattcagcct 20469680  T
Q  185 aaaat 189  Q
    |||||    
T  20469681 aaaat 20469685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 4119125 - 4119222
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaatt 178  Q
    ||||| |||||||||||| || ||||||||| |||| | |||||   |||| |||||   |||||||||||| ||| |||||||||||||||||||||    
T  4119125 aaatacaatataaattctaatcttttttaatgacacaaacaataaagcattattataacaaaatttgtttaagggtataattagaaaaatgaaaaatt 4119222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 8866872 - 8866928
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||  |||||||||||    
T  8866872 aaatataatataaattcttatcttttttaatgacaccaacaataaaacattcttata 8866928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 32939330 - 32939274
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||| ||||||||||  ||||||||||||||| |||||||||||| |||||    
T  32939330 aaatataataaaaattcttatcctttttaataacaccaccaatatgacattattata 32939274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 34672594 - 34672706
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    ||||||||||||||||||||||  ||||||||| || || |||||| |||||  ||||   |||||| ||||| ||| ||||| |||  || ||||||||    
T  34672594 aaaatataatataaattcttatcatttttaatatcatcaacaatataacattaatataaaaaaatttatttaagggtataattggaattataaaaaattc 34672693  T
Q  180 agccaaaaatctc 192  Q
    || ||||||||||    
T  34672694 agtcaaaaatctc 34672706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 8872564 - 8872619
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||||||||||||| ||||||||| |||||| |||||  |||||||||||    
T  8872564 aatataatataaattcttatcttttttaatgacaccaacaataaaacattcttata 8872619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 33803894 - 33803973
Alignment:
Q  84 tataatataaattcttatatttttt-aataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||  |||||||||||||| ||||| |||| ||| |||||    
T  33803894 tataatataaattcttatctttttttaatgacaccaacaatatagcattcttatatgcatatttgattaagggtataatt 33803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 5414813 - 5414759
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||||||||||  ||||||| |||||||||    
T  5414813 atataatataaattcttatctttttaaataacaccaaaaatatgatattcttata 5414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 8479032 - 8478930
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||||||||| | ||||| || |||||| |  |||| | | |||||||||||||| ||  || || ||| |||||||||||||    
T  8479032 aaatataataaaaattcttatatttttcattaacatcaacaatataaacttctaaaaagcaaatttgtttaagggcttatttggaataatgaaaaattca 8478933  T
Q  181 gcc 183  Q
    |||    
T  8478932 gcc 8478930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 23649888 - 23649926
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaat 111  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  23649888 aatatagaaaatataatataaattcttatattttttaat 23649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 32279619 - 32279704
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    ||||||||||||||||||||| ||||||||| |||||| ||| || ||||| ||||   |||||||| |||| | | |||||||||    
T  32279619 aaatataatataaattcttatcttttttaatgacaccaacaaaataacatttttatggtcaaatttgcttaaggatataattagaa 32279704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 13704040 - 13704112
Alignment:
Q  80 aaaatataatataaattctt-atattttttaataacaccatcaatatgacattcttatatgcaaatttgttta 151  Q
    ||||||||||||||||| || |||||||| ||||||| || |||| || |||||||||| | |||||||||||    
T  13704040 aaaatataatataaattttttatatttttgaataacatcaacaatgtggcattcttataggaaaatttgttta 13704112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 3533286 - 3533205
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||| | ||||||| |||||||||||||||| |||||| | ||| |||||   |||||||||||| ||| |||||    
T  3533286 aaaatataatatgatttcttattttttttaataacaccaacaatataatatt-ttatagaaaaatttgtttaagggtctaatt 3533205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 6018824 - 6018770
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  6018824 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 6018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 7540930 - 7540984
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  7540930 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 7540984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 11734273 - 11734171
Alignment:
Q  90 ataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaat 189  Q
    ||||||||||||  |||| |||| ||||| |||||| |||||  |||| | |||||| ||||||||| ||| | |||  || |||||||||||| |||||    
T  11734273 ataaattcttatccttttaaataccaccaacaatataacattaatataggaaaatttatttaaaggtataactggaattataaaaaattcagcccaaaat 11734174  T
Q  190 ctc 192  Q
    |||    
T  11734173 ctc 11734171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 18313579 - 18313633
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||  ||||||  ||||||| |||||||||    
T  18313579 atataatataaattcttatatttttcaaagacaccaaaaatatgatattcttata 18313633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 29043028 - 29043082
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  29043028 atataatataaattcttatgtttttaaatgacaccaaaaatatgatattcttata 29043082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 7980565 - 7980484
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||| |||||||||| ||||||||||| |||| ||||||  | || ||| | |||||||| ||||| ||| |||||    
T  7980565 aaatataataaaaattcttatcttttttaataaaaccaacaatatcgcgtttttaaaagcaaatttatttaagggtataatt 7980484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 16436914 - 16436951
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaa 110  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  16436914 aatatagaaaatataatataaattcttatcttttttaa 16436951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 14356677 - 14356709
Alignment:
Q  81 aaatataatataaattcttatattttttaataa 113  Q
    ||||||||||||||||||||||||||| |||||    
T  14356677 aaatataatataaattcttatatttttcaataa 14356709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 23958807 - 23958739
Alignment:
Q  141 aaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatctcttattcactttatatat 209  Q
    ||||||||||||||||||||||  || |||||||||| || |  |||||||| |||| | |||||||||    
T  23958807 aaatttgtttaaaggtgtaattgaaataatgaaaaatccaactcaaaatctcctatttattttatatat 23958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 32937827 - 32937783
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||||||||||||||||||  ||||||| |||||||| ||||||    
T  32937827 aaatataatataaattcttaccttttttagtaacaccaacaatat 32937783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 32938920 - 32938876
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||    
T  32938920 aaattcttatattttttaatgacaccaacaatataacattattat 32938876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 47393614 - 47393532
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatta 163  Q
    ||||||||||||| ||||||||||||| ||| |||||| |||||| ||||| ||||| | || ||||||||||| | ||||||    
T  47393614 aaatataatataatttcttatatttttgaatgacaccaacaatataacatttttataagaaattttgtttaaagatataatta 47393532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 6028628 - 6028697
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||||||||||||||| ||||||||| ||||||  |||||  ||||||| |||| ||||||||||||    
T  6028628 atataatataaattcttatcttttttaatgacaccaaaaatatagcattcttgtatgaaaatttgtttaa 6028697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 1237583 - 1237531
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  1237583 aatatagaaaatataatataaattcttatcttttttaatgacaccaacaatat 1237531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 3092441 - 3092357
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattaga 165  Q
    ||||| ||| |||||| |||| ||||||||| ||| || |||||| ||||| | ||| ||||||||| |||||||||||||||||    
T  3092441 aaatacaatctaaatttttatcttttttaattacatcaacaatataacattttcataggcaaatttgcttaaaggtgtaattaga 3092357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 24670153 - 24670081
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||||||||| ||||| |||||||  |  ||||| |||||||||||  |||||||||||||    
T  24670153 aaaatataatataaattcttatctttttaaataacataaaaaatataacattcttatagacaaatttgtttaa 24670081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 47044843 - 47044923
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||| ||||||||||| ||||| |||||||||| ||| || |||||||||||  |||||||||| || ||| |||||    
T  47044843 aatataatttaaattcttatctttttcaataacaccagcaaaataacattcttataatcaaatttgttcaagggtataatt 47044923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 10214329 - 10214435
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||||| ||| ||| |||||| ||| || |||||||||||  ||||||| ||||| ||| ||||| |||  | ||||||||||    
T  10214329 aaatataatacaaattcttatatatttgaatgacaccaacaaaataacattcttatagtcaaatttatttaagggtataattggaagga-gaaaaattca 10214427  T
Q  181 gccaaaaa 188  Q
    ||| ||||    
T  10214428 gcccaaaa 10214435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 24610690 - 24610612
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaag 154  Q
    |||| ||||||||||||| |||||||||||||||| |||   | || |||||| ||||| ||||| ||||||||||||||||    
T  24610690 aatatagaaaatataatacaaattcttatatttttgaat---agcaacaatataacatttttataggcaaatttgtttaaag 24610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 55109938 - 55109867
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||||||||  |||||| |||||||| ||| || |||||||||||  ||||||| |||||    
T  55109938 aaatataatataaattcttattatttttagtaacaccaacaaaataacattcttataatcaaatttatttaa 55109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 10582144 - 10582090
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||| ||| ||||||  ||||||| |||||||||    
T  10582144 atataatataaattcttatatttttaaatgacaccaaaaatatgatattcttata 10582090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 8897412 - 8897453
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatca 121  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  8897412 aaaatataatataaattcttattttttttaatgacaccatca 8897453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 20004783 - 20004820
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacca 118  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  20004783 aaatataatataaattcttatattttttaatgacacca 20004820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 32820037 - 32820146
Alignment:
Q  80 aaaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    ||||||||||||||||| |||| ||||||||||||||||  ||||| ||||   ||||   |||||| |||||| || ||||||||| ||| ||||  ||    
T  32820037 aaaatataatataaatttttatcttttttaataacaccaaaaatataacatcagtatagaaaaatttatttaaaagtataattagaataataaaaatatc 32820136  T
Q  180 agccaaaaat 189  Q
    |||| |||||    
T  32820137 agcccaaaat 32820146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 46058464 - 46058383
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||| | |||||||||| |||  ||||| |||| |  |||| ||||||||||||||||||||| || |||||    
T  46058464 aaatataatataaacttttatatttttgaatggcaccaacaatgtatcatttttatatgcaaatttgtttaaaagtataatt 46058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 48458105 - 48458024
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||| |||||| |||||||||||||| | ||| ||  ||||||||||  ||| ||| ||||||||| |||||    
T  48458105 aaatataatataaagtcttatcttttttaataacacaaacaaaatagcattcttatagtcaagtttttttaaaggtataatt 48458024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 20681020 - 20681075
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  20681020 aatataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 20681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 44857514 - 44857455
Alignment:
Q  73 aataaagaaaatataatataaattcttatattttttaataacaccatcaatatgacattc 132  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||||  |||||| ||||||    
T  44857514 aataaagcatatataatataaattcttattttttttagtaacaccgacaatataacattc 44857455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 56084800 - 56084855
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    |||||||||| |||||||| | |||||||||||||||| |||||| ||||| ||||    
T  56084800 aaatataatacaaattcttttcttttttaataacaccaacaatataacattattat 56084855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 2766416 - 2766465
Alignment:
Q  81 aaatataatataaat--tcttatattttttaataacaccatcaatatgac 128  Q
    |||||||||||||||  |||||| |||||||||||||||| |||||||||    
T  2766416 aaatataatataaatattcttatcttttttaataacaccaacaatatgac 2766465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 6484782 - 6484712
Alignment:
Q  92 aaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||||||||| ||| ||||||  |||||   ||| |||||||||||||||||||| ||| |||||    
T  6484782 aaattcttatatttttgaatgacaccaataatatataattattatatgcaaatttgtttaagggtataatt 6484712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 17976270 - 17976324
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  17976270 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 17976324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 23315971 - 23315842
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  23315971 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 23315872  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  23315871 agcccaaagtctc-tattcccttcatatata 23315842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 26097902 - 26097848
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  26097902 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 26097848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 111
Target Start/End: Complemental strand, 26108895 - 26108865
Alignment:
Q  81 aaatataatataaattcttatattttttaat 111  Q
    |||||||||||||||||||||||||||||||    
T  26108895 aaatataatataaattcttatattttttaat 26108865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 27746684 - 27746778
Alignment:
Q  82 aatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaa 176  Q
    |||||||||||||||||||| ||||| ||| ||||||  ||||| ||||| || || |  ||||||||||| ||| ||| | ||| |||||||||    
T  27746684 aatataatataaattcttatctttttcaatgacaccaataatataacattattgtaggtgaatttgtttaagggtataactggaagaatgaaaaa 27746778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 28704036 - 28704122
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaa-tttgtttaaaggtgtaattagaa 166  Q
    |||||| ||||||||||| || ||||||||| |||||| ||||||  |||||||||| | ||| ||||||||| ||| || ||||||    
T  28704036 aaatattatataaattctcatcttttttaatgacaccaacaatatagcattcttataagtaaattttgtttaagggtatatttagaa 28704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 39651558 - 39651612
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  39651558 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 39651612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 39657536 - 39657590
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  39657536 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 39657590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 46046046 - 46045992
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  46046046 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 46045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 51153306 - 51153360
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| |||||||||    
T  51153306 atataatataaattcttatctttttaaatgacaccaaaaatatgatattcttata 51153360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 4605789 - 4605857
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    ||||||||||||||||   |||||||| ||| |||  |  |||||| |||||||||||||||||||||||||    
T  4605789 aaatataatataaatt---atatttttgaatgacataaaaaatatggcattcttatatgcaaatttgtttaa 4605857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 4815951 - 4815870
Alignment:
Q  82 aatataatataaattctta-tattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    ||||||| | ||||||||| | |||||||||||||||| |||||| ||||| ||||| | ||||||| |||| ||| |||||    
T  4815951 aatataacaaaaattcttaatcttttttaataacaccaacaatataacattattatacgaaaatttgcttaagggtataatt 4815870  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 12294363 - 12294314
Alignment:
Q  103 ttttttaataacaccatcaatatgacattcttatatgcaaatttgtttaa 152  Q
    |||||||||||||||| |||||| | ||| ||||||| ||||||||||||    
T  12294363 ttttttaataacaccaacaatataatattattatatgaaaatttgtttaa 12294314  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 29099874 - 29099821
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttat 136  Q
    ||||||||||||||||||| ||||| ||| ||||||  ||||||| ||||||||    
T  29099874 atataatataaattcttatgtttttaaatgacaccaaaaatatgatattcttat 29099821  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 32639961 - 32640050
Alignment:
Q  120 caatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattcagccaaaaatctcttattcactttatatat 209  Q
    |||||| ||||| |||||   |||||| ||||||| ||||||| ||| ||||||||||||| ||  |||||||||||   ||||||||||    
T  32639961 caatataacattattatagaaaaatttatttaaagatgtaatttgaataatgaaaaattcaacctgaaatctcttatctcctttatatat 32640050  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 47683510 - 47683473
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacca 118  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  47683510 aaatataatataaattcttatatttttgaatgacacca 47683473  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 48171854 - 48171785
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgttt 150  Q
    |||||||| | |||||||||||||||||||| ||||||  ||||| ||||| |||||   ||||||||||    
T  48171854 aaatataacaaaaattcttatattttttaattacaccaataatataacattattatagaaaaatttgttt 48171785  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 26509624 - 26509660
Alignment:
Q  81 aaatataatataaattcttatattttttaataacacc 117  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  26509624 aaatataatataagttcttatatttcttaataacacc 26509660  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 31444965 - 31444993
Alignment:
Q  81 aaatataatataaattcttatatttttta 109  Q
    |||||||||||||||||||||||||||||    
T  31444965 aaatataatataaattcttatatttttta 31444993  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 36856 - 36730
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||   | | |||||||  |||||||||||  || ||||| ||||||  ||||| ||     
T  36856 aaatataataaaaattcttatcttttttaataacaccaacaatat---actattatatgataatttgtttaagagtataattggaaaaacaaaaaagtcg 36760  T
Q  181 gccaaaaatctcttattcactttatatata 210  Q
    ||  |||||| | ||||| |||||||||||    
T  36759 gctcaaaatcccctattctctttatatata 36730  T

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Target: scaffold1793 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 573 - 627
Alignment:
Q  83 atataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||  |||||||||    
T  573 atataatataaattcttatattttttaatgacaccaaaaatatggtattcttata 627  T

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Target: scaffold1017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 2047 - 2128
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaatt 162  Q
    |||||||||| |||||||||| |||||||||||||| | |||||| ||||| |||||   |||| ||||||| ||| |||||    
T  2047 aaatataataaaaattcttatcttttttaataacacaaacaatataacattattatagaaaaatatgtttaagggtataatt 2128  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 226399 - 226483
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaa 166  Q
    |||||||||| |||||||||| |||||||||||||| | |||||| |||||  |||| | ||||||||||||  || |||||||||    
T  226399 aaatataataaaaattcttattttttttaataacacgaacaatataacatt-atataagaaaatttgtttaatcgtataattagaa 226483  T

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Target: scaffold1777 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 641 - 597
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatat 125  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||    
T  641 aaatataatataaattcttatatttttcaataataccaacaatat 597  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 11734 - 11678
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttata 137  Q
    |||||||| | |||||||||| |||||||||||||||| |||||| ||||| |||||    
T  11734 aaatataacaaaaattcttatcttttttaataacaccaacaatataacattattata 11678  T

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Target: scaffold0636 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 3335 - 3429
Alignment:
Q  86 taatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattca 180  Q
    |||||||||||||||| ||||| ||||  ||||  ||||| |||||  |||||  |||||||||||||||| | ||||||| |||  ||||||||    
T  3335 taatataaattcttatctttttaaatatgaccaataatataacattaatatataaaaatttgtttaaaggtattattagaataatacaaaattca 3429  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 81891 - 81762
Alignment:
Q  81 aaatataatataaattcttat-attttttaataacaccatcaatatgacattcttatatgcaaatttgtttaaaggtgtaattagaaaaatgaaaaattc 179  Q
    |||||||||||||||||||||  |||||||||| |||||  ||| | |||||  |||| | |||||||||||| ||| |||||  ||  || ||||||||    
T  81891 aaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggtataattgaaattataaaaaattc 81792  T
Q  180 agccaaaaatctcttattcactttatatata 210  Q
    |||| ||| |||| ||||| ||| |||||||    
T  81791 agcccaaagtctc-tattcccttcatatata 81762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 101112 - 101178
Alignment:
Q  81 aaatataatataaattcttatattttttaataacaccatcaatatgacattcttatatgcaaatttg 147  Q
    ||||||||||||||||| ||| |||||||||   |||| |||||| |||||  ||||||||||||||    
T  101112 aaatataatataaattcatatcttttttaatgtgaccaacaatataacattaatatatgcaaatttg 101178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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