View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0684_low_96 (Length: 258)

Name: NF0684_low_96
Description: NF0684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0684_low_96
NF0684_low_96
[»] chr2 (54 HSPs)
chr2 (1-246)||(43570333-43570578)
chr2 (24-171)||(18066070-18066218)
chr2 (50-174)||(1625868-1625993)
chr2 (59-171)||(36043881-36043994)
chr2 (58-175)||(26626849-26626967)
chr2 (27-180)||(45229457-45229610)
chr2 (53-169)||(40279168-40279285)
chr2 (53-183)||(41812060-41812189)
chr2 (27-144)||(12464480-12464598)
chr2 (93-173)||(750681-750762)
chr2 (95-175)||(4606938-4607019)
chr2 (115-182)||(2142687-2142755)
chr2 (97-176)||(35378508-35378587)
chr2 (93-176)||(35378992-35379075)
chr2 (27-142)||(41241141-41241257)
chr2 (62-168)||(680483-680589)
chr2 (118-180)||(16451154-16451217)
chr2 (114-181)||(23974463-23974530)
chr2 (24-82)||(42457890-42457948)
chr2 (53-181)||(12313144-12313272)
chr2 (102-182)||(43529828-43529908)
chr2 (112-179)||(1647266-1647333)
chr2 (112-163)||(9174845-9174897)
chr2 (115-182)||(25800869-25800936)
chr2 (107-182)||(28677629-28677704)
chr2 (110-181)||(38916279-38916351)
chr2 (53-173)||(42907330-42907452)
chr2 (134-181)||(1801721-1801767)
chr2 (131-182)||(5745754-5745805)
chr2 (36-174)||(9395084-9395223)
chr2 (21-175)||(32592526-32592680)
chr2 (93-175)||(33256751-33256833)
chr2 (7-182)||(36114342-36114520)
chr2 (58-172)||(40158694-40158808)
chr2 (6-85)||(2416235-2416316)
chr2 (114-175)||(13325602-13325664)
chr2 (53-146)||(33942121-33942215)
chr2 (117-182)||(36534803-36534869)
chr2 (93-182)||(41817179-41817268)
chr2 (58-175)||(41851511-41851629)
chr2 (77-134)||(6993742-6993799)
chr2 (114-173)||(7928276-7928337)
chr2 (93-134)||(9530746-9530787)
chr2 (93-173)||(33192213-33192293)
chr2 (118-174)||(43279506-43279563)
chr2 (58-146)||(43911004-43911093)
chr2 (114-181)||(449879-449947)
chr2 (107-182)||(7035536-7035612)
chr2 (116-175)||(15757634-15757694)
chr2 (63-146)||(22681190-22681274)
chr2 (130-182)||(24100977-24101029)
chr2 (24-100)||(35755554-35755630)
chr2 (114-181)||(40682365-40682433)
chr2 (96-175)||(41293139-41293219)
[»] chr5 (49 HSPs)
chr5 (6-175)||(39105386-39105558)
chr5 (58-182)||(2568633-2568758)
chr5 (7-171)||(9202728-9202895)
chr5 (114-181)||(10639985-10640053)
chr5 (44-134)||(10272449-10272539)
chr5 (6-175)||(1464996-1465167)
chr5 (24-127)||(12425513-12425616)
chr5 (24-182)||(12459971-12460128)
chr5 (118-183)||(42582364-42582429)
chr5 (114-182)||(19460356-19460424)
chr5 (93-175)||(7984980-7985063)
chr5 (14-173)||(11700092-11700254)
chr5 (93-175)||(17258860-17258942)
chr5 (115-182)||(32859689-32859756)
chr5 (115-182)||(32861861-32861928)
chr5 (117-182)||(7808540-7808606)
chr5 (21-182)||(16457948-16458109)
chr5 (60-173)||(16937861-16937975)
chr5 (53-174)||(17368647-17368768)
chr5 (67-129)||(41016164-41016226)
chr5 (20-180)||(29925779-29925940)
chr5 (114-169)||(40426797-40426853)
chr5 (114-161)||(42099862-42099910)
chr5 (64-182)||(6587077-6587195)
chr5 (115-182)||(32862645-32862712)
chr5 (24-146)||(42582854-42582977)
chr5 (120-173)||(706501-706555)
chr5 (114-175)||(12857681-12857743)
chr5 (114-179)||(35446087-35446153)
chr5 (93-174)||(37611193-37611274)
chr5 (93-174)||(37787923-37788004)
chr5 (53-127)||(41957476-41957550)
chr5 (114-182)||(3735127-3735196)
chr5 (130-175)||(7853689-7853734)
chr5 (114-175)||(42500218-42500279)
chr5 (147-183)||(499700-499736)
chr5 (58-181)||(1619066-1619188)
chr5 (138-178)||(2973517-2973557)
chr5 (115-170)||(3280696-3280751)
chr5 (134-182)||(3520630-3520678)
chr5 (120-175)||(12857314-12857370)
chr5 (67-174)||(28776978-28777086)
chr5 (130-182)||(31038333-31038385)
chr5 (130-182)||(31047557-31047609)
chr5 (24-84)||(34112817-34112877)
chr5 (130-182)||(39248148-39248199)
chr5 (116-180)||(40438925-40438989)
chr5 (24-80)||(42583091-42583147)
chr5 (53-121)||(42646886-42646954)
[»] chr3 (34 HSPs)
chr3 (53-182)||(21367638-21367768)
chr3 (60-182)||(45541549-45541671)
chr3 (6-182)||(402511-402689)
chr3 (53-174)||(25453836-25453958)
chr3 (27-174)||(53789438-53789586)
chr3 (114-175)||(20880508-20880570)
chr3 (53-129)||(14145883-14145959)
chr3 (53-175)||(34610782-34610905)
chr3 (24-143)||(44061032-44061151)
chr3 (58-180)||(46778162-46778284)
chr3 (53-182)||(21574462-21574590)
chr3 (53-182)||(30443864-30443994)
chr3 (1-174)||(30573892-30574065)
chr3 (114-182)||(39980761-39980830)
chr3 (58-174)||(45264343-45264460)
chr3 (93-181)||(49465636-49465724)
chr3 (27-182)||(583991-584147)
chr3 (29-129)||(2719416-2719515)
chr3 (130-182)||(31365157-31365209)
chr3 (55-182)||(54837004-54837131)
chr3 (115-165)||(3194250-3194301)
chr3 (36-146)||(45432944-45433055)
chr3 (93-182)||(466204-466294)
chr3 (114-183)||(901956-902026)
chr3 (114-171)||(5391911-5391968)
chr3 (117-174)||(26878235-26878293)
chr3 (114-175)||(37389215-37389277)
chr3 (28-172)||(36631030-36631175)
chr3 (123-171)||(39723381-39723429)
chr3 (114-182)||(19983807-19983875)
chr3 (27-119)||(30956659-30956751)
chr3 (27-119)||(30972471-30972563)
chr3 (130-174)||(49556907-49556951)
chr3 (115-182)||(53952081-53952148)
[»] chr4 (41 HSPs)
chr4 (53-179)||(17822837-17822964)
chr4 (4-174)||(1706542-1706715)
chr4 (115-182)||(21523591-21523658)
chr4 (96-175)||(30668343-30668422)
chr4 (23-174)||(1203093-1203246)
chr4 (114-182)||(13126545-13126614)
chr4 (5-146)||(17883989-17884133)
chr4 (114-182)||(25904192-25904261)
chr4 (118-182)||(29774276-29774341)
chr4 (39-182)||(23459585-23459728)
chr4 (27-165)||(55414406-55414545)
chr4 (1-72)||(23503476-23503549)
chr4 (24-173)||(52315175-52315325)
chr4 (31-182)||(22661958-22662111)
chr4 (36-175)||(25332728-25332869)
chr4 (114-175)||(2703058-2703121)
chr4 (63-174)||(2996554-2996665)
chr4 (36-100)||(25885813-25885877)
chr4 (122-173)||(49939929-49939981)
chr4 (112-182)||(1137742-1137812)
chr4 (1-168)||(3155520-3155690)
chr4 (79-175)||(28615331-28615428)
chr4 (53-167)||(52746825-52746939)
chr4 (17-164)||(1407891-1408040)
chr4 (114-175)||(22030235-22030297)
chr4 (93-174)||(24169274-24169356)
chr4 (53-174)||(28300277-28300398)
chr4 (1-171)||(44138476-44138649)
chr4 (107-174)||(44938740-44938808)
chr4 (114-175)||(54426075-54426137)
chr4 (94-171)||(55302261-55302339)
chr4 (50-146)||(7694015-7694112)
chr4 (31-182)||(22666437-22666590)
chr4 (36-85)||(26520296-26520345)
chr4 (114-182)||(39603139-39603208)
chr4 (24-73)||(49803153-49803202)
chr4 (29-134)||(51630058-51630163)
chr4 (114-174)||(26842-26902)
chr4 (130-174)||(20109634-20109678)
chr4 (115-174)||(29657417-29657477)
chr4 (53-85)||(47946169-47946201)
[»] chr8 (38 HSPs)
chr8 (36-174)||(29205762-29205900)
chr8 (56-181)||(27028805-27028931)
chr8 (93-182)||(42215276-42215365)
chr8 (24-176)||(13459588-13459739)
chr8 (114-181)||(33808335-33808403)
chr8 (7-174)||(10114413-10114582)
chr8 (116-182)||(32840955-32841022)
chr8 (121-182)||(31716196-31716258)
chr8 (114-175)||(16825514-16825575)
chr8 (27-182)||(26771210-26771366)
chr8 (113-176)||(31751532-31751596)
chr8 (93-175)||(1930046-1930129)
chr8 (24-134)||(4558740-4558850)
chr8 (24-181)||(7646148-7646305)
chr8 (36-173)||(10758235-10758372)
chr8 (93-182)||(30251423-30251513)
chr8 (114-174)||(10120788-10120849)
chr8 (114-182)||(1058046-1058114)
chr8 (130-182)||(28763417-28763469)
chr8 (107-182)||(35643957-35644033)
chr8 (1-82)||(37444485-37444568)
chr8 (63-134)||(7645959-7646030)
chr8 (24-127)||(13652157-13652260)
chr8 (24-127)||(13710800-13710903)
chr8 (1-85)||(16210953-16211039)
chr8 (96-146)||(20672764-20672815)
chr8 (26-84)||(1074080-1074138)
chr8 (23-85)||(3537098-3537160)
chr8 (93-182)||(12851187-12851276)
chr8 (121-182)||(12976251-12976313)
chr8 (93-174)||(26473730-26473811)
chr8 (58-128)||(34551096-34551166)
chr8 (95-175)||(2458543-2458623)
chr8 (112-172)||(10383915-10383975)
chr8 (115-175)||(27492970-27493031)
chr8 (114-165)||(1113090-1113142)
chr8 (93-133)||(10075570-10075610)
chr8 (93-168)||(35220707-35220782)
[»] chr6 (21 HSPs)
chr6 (5-174)||(9093533-9093705)
chr6 (114-182)||(9912160-9912229)
chr6 (7-171)||(2734995-2735159)
chr6 (70-174)||(13907573-13907678)
chr6 (53-175)||(20368157-20368279)
chr6 (112-169)||(28641732-28641789)
chr6 (6-84)||(264293-264373)
chr6 (114-179)||(834997-835062)
chr6 (93-165)||(34430447-34430520)
chr6 (115-182)||(848022-848090)
chr6 (130-182)||(9559391-9559443)
chr6 (115-173)||(1575928-1575986)
chr6 (115-173)||(31624123-31624181)
chr6 (63-134)||(32386581-32386652)
chr6 (116-182)||(33832243-33832309)
chr6 (123-171)||(696483-696531)
chr6 (24-85)||(29274296-29274357)
chr6 (116-169)||(29660054-29660107)
chr6 (95-175)||(31813174-31813255)
chr6 (93-133)||(4324472-4324512)
chr6 (58-134)||(31671092-31671168)
[»] chr7 (30 HSPs)
chr7 (27-181)||(48469989-48470144)
chr7 (58-182)||(17248531-17248653)
chr7 (6-175)||(33678704-33678874)
chr7 (31-144)||(40688993-40689107)
chr7 (91-175)||(38499889-38499974)
chr7 (40-174)||(39967878-39968013)
chr7 (115-182)||(44989646-44989715)
chr7 (7-85)||(37832207-37832286)
chr7 (93-182)||(36517590-36517678)
chr7 (114-174)||(33601387-33601448)
chr7 (1-134)||(20881654-20881789)
chr7 (115-173)||(15740390-15740448)
chr7 (24-134)||(30496646-30496757)
chr7 (1-133)||(47177553-47177687)
chr7 (114-175)||(19302539-19302601)
chr7 (117-174)||(20526481-20526539)
chr7 (24-126)||(27481320-27481422)
chr7 (114-180)||(45790397-45790463)
chr7 (53-169)||(12110331-12110447)
chr7 (51-171)||(17944323-17944444)
chr7 (114-174)||(20526906-20526967)
chr7 (134-179)||(25635547-25635592)
chr7 (9-141)||(39393589-39393720)
chr7 (130-182)||(39629928-39629978)
chr7 (123-171)||(43219785-43219833)
chr7 (130-182)||(21568464-21568516)
chr7 (26-118)||(28340878-28340970)
chr7 (24-80)||(36982415-36982471)
chr7 (63-146)||(38010695-38010779)
chr7 (130-182)||(45593577-45593629)
[»] chr1 (56 HSPs)
chr1 (24-182)||(37842325-37842483)
chr1 (1-182)||(31517710-31517890)
chr1 (24-182)||(1432457-1432616)
chr1 (114-183)||(3887600-3887670)
chr1 (27-183)||(24915019-24915176)
chr1 (114-181)||(47498809-47498877)
chr1 (1-121)||(37841915-37842037)
chr1 (36-182)||(51695464-51695610)
chr1 (114-171)||(37631539-37631597)
chr1 (24-173)||(27145714-27145863)
chr1 (112-179)||(11639389-11639456)
chr1 (24-151)||(27820337-27820464)
chr1 (114-181)||(37473435-37473503)
chr1 (114-181)||(49938779-49938847)
chr1 (116-182)||(11941296-11941363)
chr1 (93-174)||(37811863-37811944)
chr1 (36-144)||(9656604-9656713)
chr1 (114-174)||(15477597-15477658)
chr1 (114-174)||(38503442-38503503)
chr1 (87-170)||(4699597-4699680)
chr1 (115-182)||(27820166-27820233)
chr1 (107-182)||(41184619-41184695)
chr1 (24-128)||(49888709-49888813)
chr1 (135-182)||(2295150-2295197)
chr1 (28-182)||(14576623-14576777)
chr1 (117-171)||(27976639-27976694)
chr1 (96-174)||(28689430-28689508)
chr1 (93-179)||(43338127-43338213)
chr1 (137-175)||(5894155-5894193)
chr1 (53-127)||(7218099-7218173)
chr1 (64-134)||(7244676-7244746)
chr1 (29-83)||(15687142-15687196)
chr1 (119-172)||(17577689-17577743)
chr1 (114-175)||(27970270-27970332)
chr1 (95-172)||(35925703-35925780)
chr1 (67-129)||(44422684-44422746)
chr1 (93-182)||(45975701-45975791)
chr1 (24-73)||(1255510-1255559)
chr1 (118-174)||(4481966-4482022)
chr1 (107-163)||(6292518-6292574)
chr1 (119-179)||(7862115-7862176)
chr1 (114-182)||(7941638-7941707)
chr1 (114-182)||(10280681-10280749)
chr1 (1-82)||(15784252-15784336)
chr1 (130-171)||(30286499-30286540)
chr1 (58-99)||(37295771-37295812)
chr1 (60-175)||(3233991-3234107)
chr1 (118-182)||(5709663-5709727)
chr1 (58-134)||(7472287-7472363)
chr1 (112-175)||(10199385-10199448)
chr1 (60-175)||(17603360-17603476)
chr1 (93-182)||(19389912-19390002)
chr1 (90-134)||(26461959-26462003)
chr1 (109-175)||(38480550-38480618)
chr1 (148-188)||(41505751-41505791)
chr1 (114-181)||(51929509-51929577)
[»] scaffold0221 (1 HSPs)
scaffold0221 (94-171)||(22243-22321)
[»] scaffold0024 (1 HSPs)
scaffold0024 (24-82)||(21348-21406)
[»] scaffold0608 (1 HSPs)
scaffold0608 (118-174)||(9615-9671)
[»] scaffold0528 (1 HSPs)
scaffold0528 (130-182)||(951-1003)


Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 43570333 - 43570578
Alignment:
Q  1 aagcacttatcatgataagtgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43570333 aagcacttatcatgataagcgcttgtataagctaattctatagtaaaatataaaatgaagttaaattgttttcatttaagctatacgttatcttcataag 43570432  T
Q  101 ccatcctggaaagcttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacagcttatgctcaagccaatc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43570433 ccatcctggaaagcttatgaaaataagctaaaaaagcttatgaacaatgtcataagctgttttcataagttctccttaacagcttatgctcaagccaatc 43570532  T
Q  201 caaacaggcccttagatcgaatgagaattttggcaccttttatatt 246  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  43570533 caaacaggcccttagattgaatgagaattttggcaccttttatatt 43570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 18066070 - 18066218
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||||||| | ||||||||| | | | ||||||||| ||| |||| | |||| |||||    
T  18066070 tgtagaagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaa 18066169  T
Q  124 taagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||| | |||| ||||||||| |||||||| ||||||||||||||||||    
T  18066170 taaggtgaaaatagcttatgagcaatgtcataagctgttttcataagtt 18066218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 1625868 - 1625993
Alignment:
Q  50 atgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaat 148  Q
    ||||||| |||||||||||||||||| |||| |||| ||| | ||||||||| ||| |||| | |||| |||||| |||| |||| | |||||||||| |    
T  1625868 atgaaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacatt 1625967  T
Q  149 gtcagaagctgttttcataagttctc 174  Q
    |||| |||||  ||||||||||||||    
T  1625968 gtcataagctactttcataagttctc 1625993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 36043881 - 36043994
Alignment:
Q  59 agttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagc 157  Q
    ||||||||||||||||| |||||||||   | ||||||| ||  ||| |||| ||||||||||| | ||||||||| |||||||||||||||||  |||     
T  36043881 agttaaattgttttcgtataagctataaactgtcttcattagttatcttggagagcttatgaaattgagctaaaaacagcttatgaacaatgtcgtaagt 36043980  T
Q  158 tgttttcataagtt 171  Q
    ||||||||||||||    
T  36043981 tgttttcataagtt 36043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 26626849 - 26626967
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaag 156  Q
    |||||||||||||||||| ||||||| | | | | ||||||||| ||| || | | ||||||||||||| || |||| || ||||||||||||||| |||    
T  26626849 aagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataag 26626948  T
Q  157 ctgttttcataagttctcc 175  Q
    || ||||| ||||||||||    
T  26626949 ctattttcgtaagttctcc 26626967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 45229457 - 45229610
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| |||||||| |||  || |||||| ||||||||||||| || || | ||| | || | ||||||||| ||| | || | |||||||||||||    
T  45229457 ataagctatttctatagcaaacgataaaatgaggttaaattgtttttgtatatgttat-cattgttttcataagctatcttcgagaacttatgaaaataa 45229555  T
Q  127 gct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaac 180  Q
    ||| ||||||||| ||||| ||||||| ||| | |||||||||||||||| ||||    
T  45229556 gctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaaac 45229610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 40279168 - 40279285
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||||||||||||||||||| || |||| |||| ||| | ||||||||| ||  |||| | ||||||||||| |||| |||| || |||||||||||| |    
T  40279168 aaatgaagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgcc 40279267  T
Q  152 agaagctgttttcataag 169  Q
    | ||| ||||||||||||    
T  40279268 ataagttgttttcataag 40279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 41812189 - 41812060
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||||||||||||||||||| || || |||| | | | | |||| |||| ||| |||||| |||| |||| |||| | ||||||||||||||| ||||||    
T  41812189 aaatgaagttaaattgtttttgtatatgctacaagatgt-ttcaaaagctatcttggaaaacttaggaaa-taagttgaaaaaagcttatgaaaaatgtc 41812092  T
Q  152 agaagctgttttcataagttctcctaaacagc 183  Q
    | |||||||||||| ||||||||| |||||||    
T  41812091 ataagctgttttcaaaagttctcccaaacagc 41812060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 12464598 - 12464480
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| |||| ||| |||| || |||| ||||||||||||||| || || |||||| | ||| ||||||||| ||| |||| | ||| |||||||||    
T  12464598 ataagctatttctgtagaaaaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataa 12464499  T
Q  127 gct-aaaaaagcttatgaa 144  Q
    ||| |||||||||| ||||    
T  12464498 gctgaaaaaagcttgtgaa 12464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 750681 - 750762
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||||||| ||| |||| | |||||| ||||||||| |||| ||||||||||||||||||  |||| ||||||||||||||    
T  750681 ttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttct 750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 4606938 - 4607019
Alignment:
Q  95 cataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| ||| |||| | ||||||||||||||||||||  |||| ||||||||||||| ||| |||||||| |||||||||    
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcc 4607019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 2142687 - 2142755
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||||||| |||| ||||||| ||||| ||  |||||||||||||||||| ||||||    
T  2142687 ttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttcataagttctcccaaacag 2142755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 35378587 - 35378508
Alignment:
Q  97 taagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcct 176  Q
    ||||| ||| |||| |||||||||||||||||| |||| | ||||||||||| ||||  ||||||||||||||||||||||    
T  35378587 taagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaa-gtcatcagctgttttcataagttctcct 35378508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 35379075 - 35378992
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcct 176  Q
    ||||||||| ||| |||| |||||||||||||||||| |||| | ||||||||||| ||||  ||||||||||||||| ||||||    
T  35379075 ttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaa-gtcatcagctgttttcataagctctcct 35378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 41241257 - 41241141
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| |||||||| |||| || |||||||||||||||||||| || || |||||| ||  | ||| ||||  ||| |||||| ||| ||||| |||    
T  41241257 ataagctatttctataggaaaagataaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaa 41241158  T
Q  127 gct-aaaaaagcttatg 142  Q
    ||| |||||||||||||    
T  41241157 gctgaaaaaagcttatg 41241141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 680483 - 680589
Alignment:
Q  62 taaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgt 160  Q
    |||||||||||||| ||||||||| | ||| ||||||||| ||| || | | ||| |||||||||||| |||| || |||| ||| |||||| |||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaac-atgtcataagctgt 680581  T
Q  161 tttcataa 168  Q
    ||||||||    
T  680582 tttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 16451154 - 16451217
Alignment:
Q  118 tgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaac 180  Q
    |||||||||||| |||| |||| ||||||||||||| ||| |||||||||||||||||| ||||    
T  16451154 tgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaac 16451217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 23974530 - 23974463
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||| ||| |||||| ||| |||| | ||||| |||||||||||||||||||||| |||||    
T  23974530 cttatgaaaatgagccaaaaaaacttgtgaaaattgtcataagctgttttcataagttctccaaaaca 23974463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 42457890 - 42457948
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagct 82  Q
    ||||||| ||| ||||||||||||| || |||| ||||||||||||||| |||||||||    
T  42457890 tgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagct 42457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 12313272 - 12313144
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||| |||||||||| |||| |||||||||| |  || | | ||||||| ||| |||| |||||||||||||||| | |||  | ||||||||| ||| |    
T  12313272 aaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaac-atggc 12313174  T
Q  152 agaagctgttttcataagttctcctaaaca 181  Q
    | ||||||||||||||| |||||| |||||    
T  12313173 ataagctgttttcataaattctcccaaaca 12313144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 43529908 - 43529828
Alignment:
Q  102 catcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| || ||||||||||||||| || |||| |||||||||||| || || ||||||||||||||| |||||| ||||||    
T  43529908 catcctagagagcttatgaaaataaactgaaaatagcttatgaaca-tggcataagctgttttcataaattctcccaaacag 43529828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 1647266 - 1647333
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    |||||||| ||||||||| |||| ||||||||| || ||||| |||||||||||||||||||| |||||    
T  1647266 agcttatggaaataagctgaaaacagcttatgagca-tgtcataagctgttttcataagttcttctaaa 1647333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 9174845 - 9174897
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgtttt 163  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| ||||||    
T  9174845 agcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 25800869 - 25800936
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||| | |||| |||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  25800869 ttatgaaaataagttgaaaatagcttatgaacaatgtcagaa-ttgttttaataagttctcccaaacag 25800936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 28677704 - 28677629
Alignment:
Q  107 tggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| |||||||| ||||||||  |||| | |||||||| ||||||| |||||||||||||||||||||| ||||||    
T  28677704 tggagagcttatggaaataagccgaaaacaacttatgaa-aatgtcataagctgttttcataagttctcccaaacag 28677629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 38916351 - 38916279
Alignment:
Q  110 aaagcttatgaaaataa-gctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    |||||||||| |||||| | |||||||||||||||| | || |  ||||| ||||||||||||||||||||||    
T  38916351 aaagcttatggaaataaagttaaaaaagcttatgaaaagtggcgtaagcttttttcataagttctcctaaaca 38916279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 173
Target Start/End: Original strand, 42907330 - 42907452
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatctt--cataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatg 149  Q
    |||| |||||||||||||||||||||||||||| ||| | ||  |||| || | | |||| |||||||||||||| ||| |||  ||||||||||| |||    
T  42907330 aaataaagttaaattgttttcgtttaagctataagttgttttcacatatgctaacttggagagcttatgaaaataggctgaaagcagcttatgaac-atg 42907428  T
Q  150 tcagaagctgttttcataagttct 173  Q
    | |||||||| |||| || |||||    
T  42907429 ttagaagctggtttcttatgttct 42907452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 1801721 - 1801767
Alignment:
Q  134 aagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  1801721 aagcttatgaaca-tgtcataagctgttttcataagttctcccaaaca 1801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 5745805 - 5745754
Alignment:
Q  131 aaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| | ||||| ||||||||||||||| |||| ||||||||    
T  5745805 aaaaagcttatgaaaattgtcataagctgttttcataaattcttctaaacag 5745754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 9395084 - 9395223
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaa 134  Q
    |||||||| |||| || |||| ||| |||||||||||| | ||| ||||| | | | ||||| ||  || ||| | |||||||||||||||||| ||||     
T  9395084 ttctatagaaaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaac 9395183  T
Q  135 agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||| ||||| | || |||||||||| ||||| ||||    
T  9395184 agcttataaacaacgacataagctgtttttataagctctc 9395223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 32592526 - 32592680
Alignment:
Q  21 gcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatga 120  Q
    ||||| |||| ||| || ||||| |||| || |||| | ||||||||||||| || || |||||| ||| | || |||||| ||  |||| | |||||||    
T  32592526 gcttgcataaactatttttatagaaaaagataaaataatgttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatga 32592624  T
Q  121 aaataagctaa-aaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| | | ||||||||||||| | ||||  ||||| ||||||||||||||||    
T  32592625 aaataagttgagaaaagcttatgaaaattgtcgtaagctattttcataagttctcc 32592680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 33256751 - 33256833
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||||| | | | |||||||||||||| | || || |||||||| |||||| |||||||||||||||| |||||    
T  33256751 ttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaac-atgtcataagctgttttcataagctctcc 33256833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 182
Target Start/End: Original strand, 36114342 - 36114520
Alignment:
Q  7 ttatcatgataagtgcttgtata--agctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccat 104  Q
    |||||||||||||||||| ||||  ||||| || |||   |||| || |||| ||||||||||||||| || | ||||| |  |    ||||||||| ||    
T  36114342 ttatcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttttgtattagctaaaaataggtttcataagctat 36114441  T
Q  105 cctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    | |||| | ||||| ||||||||||||||| ||||| |||||||| |||  || |||||| | ||||||||| ||||||    
T  36114442 cttggagatcttataaaaataagctaaaaacagcttttgaacaatttcattagttgttttaacaagttctcccaaacag 36114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 40158694 - 40158808
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaag 156  Q
    |||| ||| ||||||||| ||||| ||| ||| | ||||||||  || ||||| |||||||| || |||||| |||| | ||||| |||| ||||| |||    
T  40158694 aagtcaaactgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaaca-tgtcataag 40158792  T
Q  157 ctgttttcataagttc 172  Q
    ||||||||||||||||    
T  40158793 ctgttttcataagttc 40158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 2416235 - 2416316
Alignment:
Q  6 cttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    ||||||||| |||||||||  ||||||| || |||| ||| |||| || ||||||||||||||||||||  | |||||||||    
T  2416235 cttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctata 2416316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 13325602 - 13325664
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||| |||| |||||||||||||   ||||||| |||||||||||| |||||||||    
T  13325602 cttatgaaaatgagctgaaaaaagcttatgtgaaatgtcataagctgttttcaaaagttctcc 13325664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 33942121 - 33942215
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaaca 146  Q
    |||| |||| ||| ||||||| | ||||||||| ||| | ||||||||||||| | || |||| |||||||| |||| |||| ||||||||||||    
T  33942121 aaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaaca 33942215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 36534803 - 36534869
Alignment:
Q  117 atgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||| |||| || ||||||||||| | | |||||||||||||||||| ||| ||||||    
T  36534803 atgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacag 36534869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 41817179 - 41817268
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||| | |||||||| |||||||| ||||||||| |||| |  |||| |||| ||||| ||| ||||||||||| |||||||||||||    
T  41817179 ttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaaca-tgtcataagatgttttcataaattctcctaaacag 41817268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 41851511 - 41851629
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaag 156  Q
    ||||||||||||||| || || |||||| ||| | |||| |||| ||| |||| |  |||||||| |||||| | ||||||||||||| | ||||| |||    
T  41851511 aagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataag 41851610  T
Q  157 ctgttttcataagttctcc 175  Q
     ||||| ||||| ||||||    
T  41851611 ttgtttccataaattctcc 41851629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 6993799 - 6993742
Alignment:
Q  77 taagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||||||| ||| | ||||||||| || || || |||||||||||||||||||||||    
T  6993799 taagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaa 6993742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 7928337 - 7928276
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgt-cagaagctgttttcataagttct 173  Q
    |||||||||||||||| |||| | |||||||||||||| || |||||||||||| |||||||    
T  7928337 cttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttct 7928276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 9530787 - 9530746
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||||||| |||||||| ||||||||||| |||||||||||    
T  9530787 ttcataagctatcctggagagcttatgaaagtaagctaaaaa 9530746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 33192213 - 33192293
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||||||| |||||||| ||||||| || ||||||| |||| |||||||| | | ||||| || |||||||||||||||||    
T  33192213 ttcataagctatcctggagagcttataaatataagctgaaaacagcttatggata-tgtcataaactgttttcataagttct 33192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 43279563 - 43279506
Alignment:
Q  118 tgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||||| | ||||||||||||||| | ||||| ||||||||||||||| |||||    
T  43279563 tgaaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc 43279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 43911093 - 43911004
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaaca 146  Q
    |||||||||||||| ||| ||||| ||| ||| | |||| |||| ||| |||||||||| ||| |||||||| |||| | ||||||||||    
T  43911093 aagttaaattgtttccgtataagccataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaaca 43911004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 449879 - 449947
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||| ||| |||| |||||| |||||||||| ||||||| |||||||||||| |||| |||| |||||    
T  449879 cttatcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagtcctcccaaaca 449947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 7035612 - 7035536
Alignment:
Q  107 tggaaagcttatgaaaataagc-taaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| |||||||||||||||  |||| | |||||||||  ||||| ||||||||| |||||||||| | ||||||    
T  7035612 tggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacag 7035536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 15757694 - 15757634
Alignment:
Q  116 tatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||| |||||||||| |||| | ||||| |||| |||||||||| ||||||    
T  15757694 tatgaaaataagctgaaaaaagcttctgaaaattgtcataagcagttttcataaattctcc 15757634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 22681274 - 22681190
Alignment:
Q  63 aaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaaca 146  Q
    ||||||||||| | ||||||||| | | | ||||||| | ||||| || | |||||| |||||||||||||| ||||||||||||    
T  22681274 aaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 22681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 24100977 - 24101029
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| | ||||| ||| ||||| |||||||||||| ||||||    
T  24100977 aaaaaagcttatgaatattgtcataaggtgtttccataagttctcccaaacag 24101029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 35755630 - 35755554
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataag 100  Q
    ||||||||||| ||||||| | |||||  |||| |||| ||||||||||| | ||||||||| ||| | ||||||||    
T  35755630 tgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 40682433 - 40682365
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    |||||||||||||| | |||| | |||||||||||||||| ||||| |||| | ||||||||| |||||    
T  40682433 cttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaaca 40682365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 41293219 - 41293139
Alignment:
Q  96 ataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||| ||||||||   |||||||| ||||||| |||| ||||||||   ||||||| |||||||||| |||||||||||    
T  41293219 ataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcc 41293139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 39105386 - 39105558
Alignment:
Q  6 cttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagcca 103  Q
    |||||||||||||| ||||  |||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||   | | ||||||||| |    
T  39105386 cttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagcta 39105485  T
Q  104 tcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    || |||| | ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  39105486 tcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcc 39105558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 2568633 - 2568758
Alignment:
Q  58 aagttaaattgtttt-cgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaa 155  Q
    ||||||||||||||| ||| ||||||||| ||| | ||||||||| ||| |||| |||| |||||||||||||||||| | ||||||||  |||||| ||    
T  2568633 aagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaa-tatgtcataa 2568731  T
Q  156 gctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||||| ||||||||    
T  2568732 gctgttttcataagttcttctaaacag 2568758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 171
Target Start/End: Complemental strand, 9202895 - 9202728
Alignment:
Q  7 ttatcatgataagtgcttgtata--agctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccat 104  Q
    |||||||||||||||||| ||||  ||||| |||| ||| |||| || |||| |||||||||||||||| | ||||| ||| | | | ||||||||  ||    
T  9202895 ttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttat 9202796  T
Q  105 cctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    | || | | ||||||||||||||||  ||| |||||||||||||||||| ||||||||| ||| ||||    
T  9202795 cttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagtt 9202728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 10639985 - 10640053
Alignment:
Q  114 cttatgaaaataagcta-aaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  10639985 cttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaaca 10640053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 10272539 - 10272449
Alignment:
Q  44 taaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||| || |||| |||| ||||||||||||| ||||||||| ||| | ||||||||||||| |||| || ||||||||||||||| ||||    
T  10272539 taaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaa 10272449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 1465167 - 1464996
Alignment:
Q  6 cttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagcca 103  Q
    ||||||| |||||| ||||  |||||||||| |||||||| | |  || |||| ||||||||| | ||| || ||||||||| ||||| || |||||| |    
T  1465167 cttatcaagataagcgcttatgtataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataagttatttt-ataagcta 1465069  T
Q  104 tcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    || ||||   ||| |||||||||||| |||| | ||||||| ||||| || ||||||||||||||||||||||    
T  1465068 tcttggaggacttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctcc 1464996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 12425513 - 12425616
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||| ||| || |||||||||| || |||| |||||||||||||||||| ||||||||| | | | |||| |||| ||| |||| | ||||||||||    
T  12425513 tgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaa 12425612  T
Q  124 taag 127  Q
    ||||    
T  12425613 taag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 12460128 - 12459971
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||  |||| || |||| |||||| |||||||||   ||| ||||| ||| |||||| |||| ||| || | ||||||||||||    
T  12460128 tgtataagctatttctataacaaaagataaaat-aagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaa 12460030  T
Q  124 taagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||| ||||| | | ||||||| |||||| ||| |||||||||| ||||||| ||||||    
T  12460029 taagccaaaaacaacatatgaac-atgtcataagttgttttcataggttctcccaaacag 12459971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 42582429 - 42582364
Alignment:
Q  118 tgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacagc 183  Q
    ||||| |||||||||| || ||||||||||||| | |||||||| ||||||||||||| |||||||    
T  42582429 tgaaactaagctaaaacagtttatgaacaatgttataagctgttctcataagttctccaaaacagc 42582364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 19460424 - 19460356
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||| ||| |||||||||| ||| ||| ||| ||||| || ||||||||||||||||    
T  19460424 cttatgaaaataagctgaaacagcttatgaaaaatatcataagttgtttccaaaagttctcctaaacag 19460356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 7984980 - 7985063
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||| ||| |||| |  ||||||||||||||| |||| ||||||||||||| |||| ||||||||||| |||| |||||    
T  7984980 ttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcc 7985063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 11700092 - 11700254
Alignment:
Q  14 gataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagct-atacgttatcttcataagccatcctgga 110  Q
    |||||||||||  |||||||||| |||||||  |||| || || | ||||||  |||||||||| |||||| ||| ||| | || ||| || ||| ||||    
T  11700092 gataagtgcttatgtataagctatttctatataaaaaaataaattaaagttatgttgttttcgtataagcttataagttgttttgatatgctatcgtgga 11700191  T
Q  111 aagcttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttct 173  Q
     | |||||||||||||| | ||| |  ||||||||||||||| ||| ||||| ||||||||||    
T  11700192 gaacttatgaaaataagatgaaacaatttatgaacaatgtcataagttgtttccataagttct 11700254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 17258942 - 17258860
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| | |||||| | |||||||||||||||||| |||| ||||||||||| |||||| ||||| |||||||| |||||||    
T  17258942 ttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaac-atgtcataagctattttcataggttctcc 17258860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 32859756 - 32859689
Alignment:
Q  115 ttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||||||||||||| ||||||  ||| ||||||||||| |||| | ||||||    
T  32859756 ttatgaaaataagctgaaaaagcttatgaaaaatgtcgtaagttgttttcataaattcttccaaacag 32859689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 32861928 - 32861861
Alignment:
Q  115 ttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||||||||||||| ||||||  ||| ||||||||||| |||| | ||||||    
T  32861928 ttatgaaaataagctgaaaaagcttatgaaaaatgtcgtaagttgttttcataaattcttccaaacag 32861861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 7808540 - 7808606
Alignment:
Q  117 atgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||| |||| |||||||||||||||| | ||||| |||||||||| ||||| ||||||    
T  7808540 atgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacag 7808606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 16458109 - 16457948
Alignment:
Q  21 gcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatga 120  Q
    ||||| |||||||| || ||||| |||| || |||| || |||||||||||| || || |||||| ||| | || || ||| |   |||| | ||| |||    
T  16458109 gcttgcataagctatttttatagcaaaagataaaat-aacttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtga 16458011  T
Q  121 aaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| || |||| |||||||||| | ||||| |||||||||||||||||||||| ||||||    
T  16458010 aaataaactgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaaacag 16457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 16937975 - 16937861
Alignment:
Q  60 gttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagct 158  Q
    ||||||||||||| || || |||||| ||| | || ||| || ||  |||| | |||| ||||||||||| |||||||||||||||   ||||| |||||    
T  16937975 gttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagct 16937876  T
Q  159 gttttcataagttct 173  Q
    |||||||||||||||    
T  16937875 gttttcataagttct 16937861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 17368647 - 17368768
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaa-gcttatgaacaatgtc 151  Q
    ||||||||| ||| |||||| || ||| ||||| ||| | ||||||||| ||| |||| || ||||| ||||||||| ||||  || |||||||| ||||    
T  17368647 aaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaaca-tgtc 17368745  T
Q  152 agaagctgttttcataagttctc 174  Q
    | ||| |||||||||||||||||    
T  17368746 ataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 41016164 - 41016226
Alignment:
Q  67 tgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct 129  Q
    ||||||| | ||||||||| ||| | |||| |||||||| |||||||||||||||||||||||    
T  41016164 tgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagct 41016226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 29925779 - 29925940
Alignment:
Q  20 tgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatg 119  Q
    |||||| |||||||| || ||||| |||| || ||||   ||||||||||||  || |  |||||| ||| | | ||||||| ||  |||| | ||||||    
T  29925779 tgcttgcataagctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatg 29925878  T
Q  120 aaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaac 180  Q
    |||||||| | |||||| |  ||||||| ||||| |||||||||||||||||||||| ||||    
T  29925879 aaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaac 29925940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 40426797 - 40426853
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataag 169  Q
    |||| ||||||||||| ||||||||||||||| |||| || ||||||||||||||||    
T  40426797 cttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgttttcataag 40426853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 42099910 - 42099862
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgtt 161  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  42099910 cttatgaaaataagccaaaaacagcttatgaacaatgtcataagctgtt 42099862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 6587195 - 6587077
Alignment:
Q  64 aattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttt 162  Q
    |||||||||||| ||||||||| ||| | ||||||||| ||  |||| | ||| ||||||||||||  ||| |||||||||||  ||||| |||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaac-ctgtcataagctgttt 6587097  T
Q  163 tcataagttctcctaaacag 182  Q
    |  |||||||| | ||||||    
T  6587096 ttttaagttcttccaaacag 6587077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 32862712 - 32862645
Alignment:
Q  115 ttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||  ||||||||||||| ||||||  ||| ||||||||||| |||| | ||||||    
T  32862712 ttatgaaaataagctggaaaagcttatgaaaaatgtcgtaagttgttttcataaattcttccaaacag 32862645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 42582854 - 42582977
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||| ||  ||||| ||||||| |||||||||||| |||||||||| |||| | | | ||  ||||| ||  |||| | ||||||||||    
T  42582854 tgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctatattggagaacttatgaaaa 42582953  T
Q  124 taagct-aaaaaagcttatgaaca 146  Q
    |||||| |||| || |||||||||    
T  42582954 taagctcaaaacagtttatgaaca 42582977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 706501 - 706555
Alignment:
Q  120 aaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    |||||||||| |||| |||||||||||||||||| || || ||||||||||||||    
T  706501 aaaataagctgaaaatagcttatgaacaatgtcataaactattttcataagttct 706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 12857743 - 12857681
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||||| ||||||| || |||| | ||||| ||| ||||||||||||||||||    
T  12857743 cttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctcc 12857681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 35446087 - 35446153
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    |||||||||||||||| ||||||||||| ||| ||||||| || ||||||||  |||||||| ||||    
T  35446087 cttatgaaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttcgaaagttctcttaaa 35446153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 37611274 - 37611193
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||| ||| |||| |||||||| |||||| || |||| |||||||||||| ||||| ||| |||||||||||| ||||    
T  37611274 ttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaaca-tgtcacaagttgttttcataagctctc 37611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 37788004 - 37787923
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||| ||| |||| |||||||| |||||| || |||| |||||||||||| ||||| ||| |||||||||||| ||||    
T  37788004 ttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaaca-tgtcacaagttgttttcataagctctc 37787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 41957550 - 41957476
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataag 127  Q
    ||||||||||||||||||||| | |||| |||| | | | ||||||||| ||||| || | ||||||||||||||    
T  41957550 aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataag 41957476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 3735196 - 3735127
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||| ||||||| |||||||||| |||| | ||||| ||||||||||||| |||||| | ||||||    
T  3735196 cttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttctaccaaacag 3735127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 7853689 - 7853734
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||| |||||||||||||||||| ||| ||||| ||||||||||||    
T  7853689 aaaacagcttatgaacaatgtcataagttgtttccataagttctcc 7853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 42500279 - 42500218
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||| | |||||||||||||| | ||||  ||| ||||| ||||||||||||    
T  42500279 cttatgaaaataagttgaaaaagcttatgaaaattgtcgtaagttgtttccataagttctcc 42500218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 499736 - 499700
Alignment:
Q  147 atgtcagaagctgttttcataagttctcctaaacagc 183  Q
    |||||| |||||||||||||||||||||| |||||||    
T  499736 atgtcataagctgttttcataagttctcccaaacagc 499700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 1619066 - 1619188
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaag 156  Q
    |||||||||| ||| ||| ||||||||| | | | ||||||||||||  |||| ||| ||||||||| |||| |||| || ||||| | |||| || |||    
T  1619066 aagttaaattctttccgtataagctataagctgttttcataagccatt-tggagagcatatgaaaatcagctgaaaacagtttatgta-aatggcataag 1619163  T
Q  157 ctgttttcataagttctcctaaaca 181  Q
    |||||||||||||| |||| |||||    
T  1619164 ctgttttcataagtactcccaaaca 1619188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 2973557 - 2973517
Alignment:
Q  138 ttatgaacaatgtcagaagctgttttcataagttctcctaa 178  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  2973557 ttatgaaaattgtcataagctgttttcataagttctcctaa 2973517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 3280751 - 3280696
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagt 170  Q
    |||||||||||| ||||||| |||||||||| | ||||| |||||||||||||||||    
T  3280751 ttatgaaaataaactaaaaagagcttatgaaga-tgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 3520630 - 3520678
Alignment:
Q  134 aagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||| || |||| ||| |||||||||||||||||| ||||||    
T  3520630 aagcttatgaaaaaagtcataagatgttttcataagttctcccaaacag 3520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 12857370 - 12857314
Alignment:
Q  120 aaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||| |||||||||| |||| | ||||| ||| ||||||||||||||||||    
T  12857370 aaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctcc 12857314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 28776978 - 28777086
Alignment:
Q  67 tgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttca 165  Q
    ||||||||| || |||||| | | | ||||||||| ||| |||| | || ||||||||||| |||||| || || |||||||||||| || || |||| |    
T  28776978 tgttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatagtttttgaacaatgtcataaactattttta 28777077  T
Q  166 taagttctc 174  Q
    |||||||||    
T  28777078 taagttctc 28777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 31038333 - 31038385
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| ||||||| ||||| |||| ||||||| ||| ||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacag 31038385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 31047557 - 31047609
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| ||||||| ||||| |||| ||||||| ||| ||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacag 31047609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 34112817 - 34112877
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctat 84  Q
    ||||||||||| ||||||||||||| || || | ||||||| |||||||| | ||||||||    
T  34112817 tgtataagctatttctatagtaaaagattaattaaagttaagttgttttcatataagctat 34112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 39248148 - 39248199
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| ||||||||||||| |||| |||||||||| ||||||||||| ||||||    
T  39248148 aaaacagcttatgaacaa-gtcataagctgtttttataagttctcccaaacag 39248199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 40438989 - 40438925
Alignment:
Q  116 tatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaac 180  Q
    |||||||||||  | |||||||||||||| ||||||| ||| |||||||| | ||||||| ||||    
T  40438989 tatgaaaataaattgaaaaagcttatgaaaaatgtcacaagttgttttcaaatgttctcccaaac 40438925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 42583091 - 42583147
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaag 80  Q
    |||||||| || |||||||  |||| ||||||| |||||||||||||||||| ||||    
T  42583091 tgtataaggtatttctataacaaaagatgaaataaagttaaattgttttcgtgtaag 42583147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 42646886 - 42646954
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaa 121  Q
    |||| ||||||||||||||| |||||||||||| | | | ||||||| | ||| |||| ||||||||||    
T  42646886 aaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 21367638 - 21367768
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtc 151  Q
    |||| |||||||||||||||||| |||  |||| ||| | ||||||||| ||| |||| | |||||||||||||||| |||| ||||| |||||||||||    
T  21367638 aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtc 21367737  T
Q  152 agaagctgttttcataagttctcctaaacag 182  Q
    | |||||||||||||||||||||| ||||||    
T  21367738 ataagctgttttcataagttctcccaaacag 21367768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 45541549 - 45541671
Alignment:
Q  60 gttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagct 158  Q
    |||||||| ||||||| |||||||||  |||| ||||||||| ||| |||| | ||||||| ||||| || |||| |||||||||||| ||||| |||||    
T  45541549 gttaaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaaca-tgtcataagct 45541647  T
Q  159 gttttcataagttctcctaaacag 182  Q
    ||||||||||||||| ||||||||    
T  45541648 gttttcataagttcttctaaacag 45541671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 402689 - 402511
Alignment:
Q  6 cttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagcca 103  Q
    |||||||||||||| ||||  |||||||||| |||||||| |||| || || | || ||||||||||||||| |||| |||| | | | || |||| | |    
T  402689 cttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataagttataagctgtttttataatcta 402591  T
Q  104 tcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    || || | | ||| ||||| |||||| |||| |||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  402590 tcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaaacag 402511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 25453958 - 25453836
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||| |||| ||| ||||||||| ||| |||||   ||| ||||||| | ||||||||||||||||||||||||||| |||| ||||| |||||| | ||    
T  25453958 aaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacattttc 25453859  T
Q  152 agaagctgttttcataagttctc 174  Q
    | ||||||||||||||| |||||    
T  25453858 ataagctgttttcataaattctc 25453836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 53789586 - 53789438
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| |||||||| |||| ||||| | || ||||| |||||| || || |||||| ||| |  |||||||| ||| |||| | ||||||||| |||    
T  53789586 ataagctatttctataggaaaagatgaactaaaattaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaa 53789487  T
Q  127 gct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||| ||||||||||||||| | ||||| ||||||||| || ||||||||    
T  53789486 gctgaaaaaagcttatgaaaagtgtcataagctgtttccaaaagttctc 53789438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 20880508 - 20880570
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||||| ||||||||||||||| | ||||| |||||||||||||| |||||||    
T  20880508 cttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcc 20880570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 14145883 - 14145959
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct 129  Q
    |||| |||||||||||||||||| || |||||| ||||| ||||||||| ||| ||||   ||||||||||||||||    
T  14145883 aaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 34610905 - 34610782
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaag-cttatgaacaatgtc 151  Q
    ||||||||||||||| |||| ||  ||| |||| |||   ||||||||| ||| |||  | ||||||||||| |||| ||||   |||||||||||||||    
T  34610905 aaatgaagttaaattatttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtc 34610806  T
Q  152 agaagctgttttcataagttctcc 175  Q
    | |||| |||||||||||||||||    
T  34610805 ataagcagttttcataagttctcc 34610782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 44061151 - 44061032
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||| |||| || |||| | |||||||||||||  | ||||||||| ||| | |||||| |  ||| | || | |||||||||     
T  44061151 tgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaat 44061052  T
Q  124 taagctaaaaaagcttatga 143  Q
    |||||||||| |||||||||    
T  44061051 taagctaaaacagcttatga 44061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 46778284 - 46778162
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaa-aaagcttatgaacaatgtcagaag 156  Q
    ||||||||||||||| ||||| ||||||   | | ||||||| | ||| |||| | ||||||||| |||||| || ||| |||||||| ||||||| |||    
T  46778284 aagttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaa-taagctgaacaaaacttatgaaaaatgtcataag 46778186  T
Q  157 ctgttttcataagttctcctaaac 180  Q
     |||||||||||||||||| ||||    
T  46778185 ttgttttcataagttctcccaaac 46778162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 21574462 - 21574590
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtc 151  Q
    |||| |||||||||||||| | | |||||||||  || | || |||||| | | |||| |||||||| |||||||||||||  |||||||||||| ||||    
T  21574462 aaataaagttaaattgtttacatataagctataacttttttt-ataagctaacatggagagcttatggaaataagctaaaagcagcttatgaaca-tgtc 21574559  T
Q  152 agaagctgttttcataagttctcctaaacag 182  Q
    | ||| |||||||||||| ||||| ||||||    
T  21574560 ataagttgttttcataagctctcccaaacag 21574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 30443864 - 30443994
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||||||||||||||| ||| || || |||||| | | | || |||| | ||  |||| | |||||||||||||||| |||||||||| |||| | ||||    
T  30443864 aaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtc 30443963  T
Q  152 agaagctgttttcataagttctcctaaacag 182  Q
    | |||||||||||||||| ||| | ||||||    
T  30443964 ataagctgttttcataagctctaccaaacag 30443994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 30574065 - 30573892
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    ||||| ||||||||||||| ||||  |||||||||| |||||||  |||| || |||| ||||||| || ||||  | ||| ||||| | | | ||||||    
T  30574065 aagcatttatcatgataagcgcttatgtataagctatttctata--aaaagataaaataaagttaagttttttttttataatctatatgatgttttcata 30573968  T
Q  99 agccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||| ||| |||| |||| ||||| ||||||| |||| |||||||||||| || || ||  |||||||||||||||||    
T  30573967 agctatcttggagagctgatgaacataagctgaaaacagcttatgaaca-tgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 39980761 - 39980830
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| | |||||||||||||||    |||| ||||||||||||||||||||| |||||||    
T  39980761 cttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacag 39980830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 45264460 - 45264343
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaag 156  Q
    |||||||||||||||| |  |||||||| | ||| |||||||||  || ||||||  |  |||||||||| | |||| ||||||||||||||| |  |||    
T  45264460 aagttaaattgttttcttacaagctataagctattttcataagctctcttggaaaattggtgaaaataaggtgaaaacagcttatgaacaatgccgtaag 45264361  T
Q  157 ctgttttcataagttctc 174  Q
     |||||||||||||||||    
T  45264360 ttgttttcataagttctc 45264343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 49465724 - 49465636
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||| || ||||| | |||||| ||||||||| |||||| || ||||||| ||| | |||||||||||||||||||||| |||||    
T  49465724 ttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaaca-tgtaataagctgttttcataagttctccgaaaca 49465636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 583991 - 584147
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    ||||| || |||||||| |||  || |||| ||||||||||||||| ||| | |||||| ||||  ||||||||| ||| || | | ||||||||| |||    
T  583991 ataagttatttctatagaaaatgataaaataaagttaaattgtttttgttcatgctataagttagtttcataagctatcttgaagaacttatgaaattaa 584090  T
Q  127 gc-taaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    || |||| || | |||||| | || |  ||||||||||||||| |||||| ||||||    
T  584091 gcttaaagaaacctatgaaaactgccgtaagctgttttcataaattctccaaaacag 584147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 2719416 - 2719515
Alignment:
Q  29 aagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagc 128  Q
    |||||| ||||| || ||||||| |||| |||| |||||||||| ||||||||||||   | | ||||||||| ||| |||| | |||||||||||||||    
T  2719416 aagctatttctaaagcaaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagc 2719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 31365209 - 31365157
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| | ||||| |||||| ||||||||||||||| ||||||    
T  31365209 aaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacag 31365157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 54837131 - 54837004
Alignment:
Q  55 atgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcag 153  Q
    |||||| || |||||||| || ||| || || ||||| ||||||||| ||| |||| ||||||| |||||||||  |||| |  ||||||||| |||||     
T  54837131 atgaagatacattgtttttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaaca-tgtcat 54837033  T
Q  154 aagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||| | ||||||    
T  54837032 aagctgttttcataaattcttccaaacag 54837004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 3194301 - 3194250
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttca 165  Q
    |||||||||||||||||||| ||||||||| |||||||| ||| ||||||||    
T  3194301 ttatgaaaataagctaaaaacagcttatgatcaatgtcataagttgttttca 3194250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 45433055 - 45432944
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaa 134  Q
    |||||||  |||| || ||||||||||||||||||||| | | |||||||  || | |||| ||| ||||||| | |||||||| ||||||||| ||||     
T  45433055 ttctataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaac 45432956  T
Q  135 agcttatgaaca 146  Q
    | ||||||||||    
T  45432955 aacttatgaaca 45432944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 466204 - 466294
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||  |||| | |||||||||||||||| ||||||||||| ||| ||||| | ||||||||||  |||||| ||| ||||||    
T  466204 ttcataagctatgttggagaacttatgaaaataagctaaaaaaagcttaagaaaaatgttaaaagctgtttttgtaagttatcccaaacag 466294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 901956 - 902026
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacagc 183  Q
    |||||||||||||| | ||||||||||||| | ||||| |  ||||||||||||||||| ||| |||||||    
T  901956 cttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaacagc 902026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 5391911 - 5391968
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||||||||| | |||| |||||||||||| ||||| ||||||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 26878235 - 26878293
Alignment:
Q  117 atgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||| |||| || ||||||||||||||| ||||| |||||| ||||||||    
T  26878235 atgaaaataagctgaaaacagtttatgaacaatgtcataagctattttcacaagttctc 26878293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 37389215 - 37389277
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| ||||||||||||  ||| | |||||||||||| ||| ||||||||||||||||||    
T  37389215 cttatgagaataagctaaaagcagcatttgaacaatgtcataagttgttttcataagttctcc 37389277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 36631175 - 36631030
Alignment:
Q  28 taagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataag 127  Q
    ||||||| ||||||||||||  || || | ||||||||||||||| ||  | |||||| ||| | || || ||| ||  |||| | ||||||||||||||    
T  36631175 taagctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataag 36631076  T
Q  128 c-taaaaaagcttatgaacaatgtcagaagctgttttcataagttc 172  Q
    |  |||||||||| |||| |  |||| |||||| ||||||||||||    
T  36631075 cagaaaaaagcttttgaaaatcgtcataagctggtttcataagttc 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 39723429 - 39723381
Alignment:
Q  123 ataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  39723429 ataagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 19983807 - 19983875
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| | |||||||||||||| ||| ||| ||| | |||||||| |||| | |||||||    
T  19983807 cttatgaaaataagttgaaaaagcttatgaaaaatctcataagttattttcatatgttcccttaaacag 19983875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 30956751 - 30956659
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatg 119  Q
    |||||||| |||||||| |||| || |||| ||||||||||||||| || || |||||| ||| | |||| |||| ||| |||| | ||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 30972563 - 30972471
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatg 119  Q
    |||||||| |||||||| |||| || |||| ||||||||||||||| || || |||||| ||| | |||| |||| ||| |||| | ||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 49556907 - 49556951
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||||| | ||||| ||||||||||||||| |||||    
T  49556907 aaaaaagcttatgaaaattgtcataagctgttttcataaattctc 49556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 53952081 - 53952148
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||| |||| ||||||| ||| |  |||||||||||||||||||| |||||||    
T  53952081 ttatgaaaataagctgaaaacagctcatgaaca-tgttatcagctgttttcataagttctcttaaacag 53952148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 17822964 - 17822837
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaa-gcttatgaacaatgtc 151  Q
    |||| ||||||||||||| |  | || |||||| ||| | ||||||||| ||| |||| | |||||||||||||||||||||| ||||||||| ||||||    
T  17822964 aaattaagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtc 17822865  T
Q  152 agaagctgttttcataagttctcctaaa 179  Q
    | |||||||||||||| |||||||||||    
T  17822864 ataagctgttttcatatgttctcctaaa 17822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 1706542 - 1706715
Alignment:
Q  4 cacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagc 101  Q
    ||||| |||||||||||||||  ||| |||||| || ||||| ||||  | |||| | ||| ||||||||||||  |||||||| | | | ||||||| |    
T  1706542 cacttttcatgataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataagctgttttcataaac 1706641  T
Q  102 catcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
     ||| |||| |||||||||||||||| |  ||| ||||||||||||||| || ||||||||||||||| |||||    
T  1706642 tatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctc 1706715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 21523591 - 21523658
Alignment:
Q  115 ttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| |||| | ||||||    
T  21523591 ttatgaaaataagctgaaaaagcttatgaaaaatgtcataagttgttttcataaattcttccaaacag 21523658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 30668422 - 30668343
Alignment:
Q  96 ataagccatcctggaaagcttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||| ||| |||| || |||||||| |||||| |||||||||||||| | ||||| |||||||||||| |||||||||    
T  30668422 ataagctatcttggatagtttatgaaattaagctgaaaaagcttatgaaaagtgtcataagctgttttcacaagttctcc 30668343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 1203246 - 1203093
Alignment:
Q  23 ttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttc-gtttaagctatacgttatcttcataagccatcctggaaagcttatgaa 121  Q
    |||||||||||| |||||||| |||| || |||| |||| |  || ||||| || ||||||||| ||| ||||||||||  ||| |||| | ||||| ||    
T  1203246 ttgtataagctatttctatagcaaaacataaaataaagtaatttttttttccgtataagctataagttgtcttcataagttatcttggagaacttattaa 1203147  T
Q  122 aataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||| || ||| | | ||| ||| ||||||||||| |||||||||    
T  1203146 aataagctaaaaacagtttacggaaaatatcataagctgttttcgtaagttctc 1203093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 13126614 - 13126545
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||| ||||||||||||||  ||||||| |||||||||| ||||||||| | ||||||    
T  13126614 cttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacag 13126545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 17883989 - 17884133
Alignment:
Q  5 acttatcatgataagtgct--tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagcc 102  Q
    |||||||||| ||||||||  ||| ||||||| |||||||  |||| || |||| ||||||||||||||| || |||| |||  ||| | |||||||||     
T  17883989 acttatcatggtaagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagct 17884088  T
Q  103 atcctggaaagcttatgaaaataagct-aaaaaagcttatgaaca 146  Q
    ||  |||| ||||||||||||| |||| |||| | ||||||||||    
T  17884089 atattggagagcttatgaaaattagctgaaaacaacttatgaaca 17884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 25904261 - 25904192
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||| |||||||||| ||||||||||||||| |||| || |||||||||||||||| ||||| ||||||    
T  25904261 cttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacag 25904192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 29774276 - 29774341
Alignment:
Q  118 tgaaaataagctaaaaaagcttatgaacaa-tgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||||| |||||||| || || || ||||| |||||||||||||||||||||||    
T  29774276 tgaaaataagctaaaaaaacttatgaaaaaatgacataagctattttcataagttctcctaaacag 29774341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 23459585 - 23459728
Alignment:
Q  39 tatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagc 137  Q
    ||||| |||| || |||||||||||| |||||||| | ||||||||| | | | ||||||||  ||| || ||| |||||||| ||||| | |||| | |    
T  23459585 tatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataac 23459684  T
Q  138 ttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| ||| |||||| ||||| |||||||||||||||| ||||||    
T  23459685 ttattaac-atgtcataagcttttttcataagttctccgaaacag 23459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 55414545 - 55414406
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| |||||| | |||| || |||| ||||||| || |||| |  || ||||||  || | ||||||||  ||| |||| | |||||||||||||    
T  55414545 ataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataa 55414446  T
Q  127 gct-aaaaaagcttatgaacaatgtcagaagctgttttca 165  Q
    | | ||||||||||||||| ||||||| ||||||||||||    
T  55414445 gttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23503476 - 23503549
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgtttt 72  Q
    |||| |||||||||||||||||||  |||||| |||||||||||  ||||||| |||| |||||||||| ||||    
T  23503476 aagcgcttatcatgataagtgcttatgtataatctaattctataacaaaatataaaataaagttaaattatttt 23503549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 52315325 - 52315175
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||||| || |||| ||||||| ||||| |||||||||   | ||| |||| ||| | | ||||||| ||  |||||| ||||||||||    
T  52315325 tgtataagctatttctacagcaaaagatgaaataaagtttaattgtttttagtaaagttataagttgtttccataagctattttggaaaacttatgaaaa 52315226  T
Q  124 taagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    |||||| |||  | |||||||| ||||| | ||| |||||| |||||||||    
T  52315225 taagctgaaagcaacttatgaataatgtgataagttgttttgataagttct 52315175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 22661958 - 22662111
Alignment:
Q  31 gctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacg-ttatcttcataagccatcctggaaagcttatgaaaataagct 129  Q
    |||| |||||||| |||| || |||| ||||| |||| ||| ||| ||||||||| | || ||||||||||| ||| |||| | ||||||| |||||||     
T  22661958 gctatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagcttttcttcataagctatcatggagaacttatgacaataagca 22662057  T
Q  130 aaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
     |||| | || |||| |||||||| || ||| |||||||||||| || ||||||    
T  22662058 gaaaacaactcatgatcaatgtcataaactgatttcataagttcccccaaacag 22662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 25332728 - 25332869
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcct-ggaaagcttatgaaaataagct-aaaa 133  Q
    |||||||||||||  |||||||||||||||||||||| || |||||| || | ||| || |||||| ||| |   | | |||||||||||||||| ||||    
T  25332728 ttctatagtaaaagttgaaatgaagttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaa 25332827  T
Q  134 aagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
     | |||||||| |||| || ||| |||||||  |||||||||    
T  25332828 caacttatgaataatgccataagttgttttcgcaagttctcc 25332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 2703058 - 2703121
Alignment:
Q  114 cttatgaaaataagctaaaaaa--gcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||||| |||||  |||||||||||||||   ||||||||||| ||||||||||    
T  2703058 cttatgaaaataagctgaaaaacagcttatgaacaatgttgcaagctgttttcgtaagttctcc 2703121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 2996554 - 2996665
Alignment:
Q  63 aaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgtt 161  Q
    ||||||||||  | |||| |||| ||| | ||||||||| ||| |||| ||| |||||||||||| | ||||||||||||| || |||||| ||| ||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggac-atgtcataagttgtt 2996652  T
Q  162 ttcataagttctc 174  Q
    |||||||| ||||    
T  2996653 ttcataagctctc 2996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 25885813 - 25885877
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataag 100  Q
    |||||||| |||| || |||| |||||||||||||||||| ||||||||| ||| | ||||||||    
T  25885813 ttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataag 25885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 49939981 - 49939929
Alignment:
Q  122 aataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttct 49939929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 1137742 - 1137812
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||| |||||| || |||| | |||||||||| ||||| ||| |||||||||||||||||||||||||    
T  1137742 agcttatggaaataaactgaaaacaacttatgaaca-tgtcataagatgttttcataagttctcctaaacag 1137812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3155520 - 3155690
Alignment:
Q  1 aagcacttatcatgataag--tgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    |||| ||||||||||||||  ||  ||||||||||| |||||||| |||| || |||| ||||||||||||||| ||  |||||| | | | | ||||||    
T  3155520 aagcgcttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcata 3155619  T
Q  99 agccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataa 168  Q
    | | ||| || | | || ||||||||||||| |||| || ||| |||||||| || ||| |||| ||||||    
T  3155620 aactatcttgaagaactaatgaaaataagctgaaaacagtttacgaacaatgccataagttgttctcataa 3155690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 28615331 - 28615428
Alignment:
Q  79 agctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaag--cttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| ||| | ||||||||| ||  || | ||||||||||||||||| ||||||   |||||||| |||||||  |||||||||||||||||||||    
T  28615331 agctataagttgttttcataagctataatgaagagcttatgaaaataagccaaaaaacaacttatgaa-aatgtcattagctgttttcataagttctcc 28615428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 52746939 - 52746825
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||| ||||||||||||||| || ||||| ||| | | | ||||||||| ||| || || |||||||||||| |||| |||| ||||||||||| |||||    
T  52746939 aaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaac-atgtc 52746841  T
Q  152 agaagctgttttcata 167  Q
      ||||||||| ||||    
T  52746840 ttaagctgtttccata 52746825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 1407891 - 1408040
Alignment:
Q  17 aagtgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagctt 116  Q
    |||||||||| |||  || |||||||| |||  || ||||  |||||||||||||| || ||||||  | | | | ||||||||| |||  |||||  ||    
T  1407891 aagtgcttgtgtaaaatatttctatagcaaataataaaatagagttaaattgtttttgtgtaagctgcaagctgttttcataagctatctaggaaaattt 1407990  T
Q  117 atgaaaataagctaaaaaa--gcttatgaacaatgtcagaagctgttttc 164  Q
    ||||| ||||||| |||||  ||||||||| ||||||| |||||||||||    
T  1407991 atgaagataagctgaaaaacagcttatgaaaaatgtcataagctgttttc 1408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 22030235 - 22030297
Alignment:
Q  114 cttatgaaaataagctaa-aaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||||| || | |||||||| |||| | ||||| ||||||||||||||||||||||    
T  22030235 cttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcataagttctcc 22030297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 24169274 - 24169356
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||| |||| ||| |||| |||||||||||||||| | |||||| |||||||| ||||||| ||||| |||| | ||||||||    
T  24169274 ttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctc 24169356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 28300398 - 28300277
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||| ||||||||||||||| || |||||||||   ||| |||||| || ||| || | |||||||||||||||| | |||| | |||| |||| |||||    
T  28300398 aaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaac-atgtc 28300300  T
Q  152 agaagctgttttcataagttctc 174  Q
    | | ||||||||||||| |||||    
T  28300299 ataggctgttttcataaattctc 28300277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 44138476 - 44138649
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    |||||||||||||||||  |||||  |||||||||  |||||||| | || || |||| ||||||||||| |||||| ||  || ||  || | ||||||    
T  44138476 aagcacttatcatgatacttgcttatgtataagctgtttctatagcagaagataaaataaagttaaattgctttcgtatagcctgtaatttgttttcata 44138575  T
Q  99 agccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    | ||||  |||| | |||||||||||||||| ||||  |||| |||| ||||||| ||| | | ||||||||||    
T  44138576 aaccatgttggagaacttatgaaaataagctgaaaattgcttgtgaataatgtcataagttatcttcataagtt 44138649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 44938740 - 44938808
Alignment:
Q  107 tggaaagcttatgaaaataagctaaaaa--agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||| ||||||||||||||  | ||||||||  |||||| || ||||||||||||||||||    
T  44938740 tggaaagcttatggaaataagctaaaaaacatcttatgaa-tatgtcataacctgttttcataagttctc 44938808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 54426075 - 54426137
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||  | ||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  54426075 cttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcc 54426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 55302261 - 55302339
Alignment:
Q  94 tcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||| ||  |||||| |||||||||||||||| ||||||||||| ||| | ||||| |||||||||  |||||||    
T  55302261 tcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagtt 55302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 7694112 - 7694015
Alignment:
Q  50 atgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaaca 146  Q
    |||||||||||| ||| |||||| || ||||||||| | | | ||||||||  |||||||| || ||||| ||||||||| |||| | ||||||||||    
T  7694112 atgaaatgaagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaaca 7694015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 22666437 - 22666590
Alignment:
Q  31 gctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacg-ttatcttcataagccatcctggaaagcttatgaaaataagct 129  Q
    |||| |||||||| |||| || |||| ||||| |||| ||| ||| ||||||||| | || | ||||||||| ||| |||| | ||||||| |||||||     
T  22666437 gctatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagctttttttcataagctatcatggagaacttatgacaataagca 22666536  T
Q  130 aaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
     |||| | || |||| |||||||| || ||| |||||||||||| || ||||||    
T  22666537 gaaaacaactcatgatcaatgtcataaactgatttcataagttcccccaaacag 22666590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 26520345 - 26520296
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    |||||||  |||| ||||||| |||||||||||||||||| |||||||||    
T  26520345 ttctataacaaaagatgaaataaagttaaattgttttcgtgtaagctata 26520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 39603208 - 39603139
Alignment:
Q  114 cttatgaaaataagctaaaaaa-gcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||  ||||||| |||||| || | ||||| ||||||||||| |||||||||| ||||||    
T  39603208 cttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacag 39603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 49803153 - 49803202
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttc 73  Q
    |||||||| || |||||||| |||| || |||||||||||||||||||||    
T  49803153 tgtataagttatttctatagcaaaagataaaatgaagttaaattgttttc 49803202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 51630058 - 51630163
Alignment:
Q  29 aagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagc 128  Q
    |||||| || ||||| |||| || |||| |||||||||||||||  | ||||||||| | ||| ||||||||| ||| || | |  ||||||||||||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagc 51630157  T
Q  129 taaaaa 134  Q
    | ||||    
T  51630158 tgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 26902 - 26842
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||| || ||||||||| ||||   ||||| ||||||||||||||| |||||    
T  26902 cttatgaaaataatctgaaaaagcttgtgaaatttgtcataagctgttttcataatttctc 26842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 20109634 - 20109678
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||| |||||||| ||||||| |||||||||||| ||||||||    
T  20109634 aaaaaaacttatgaaaaatgtcataagctgttttcaaaagttctc 20109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 29657417 - 29657477
Alignment:
Q  115 ttatgaaaataagctaaaaaa-gcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||| |||||| ||||| |||| |||| | ||||| |||||||||||||||||||||    
T  29657417 ttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagttctc 29657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 47946169 - 47946201
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctata 85  Q
    ||||||||||||||||||||||| |||||||||    
T  47946169 aaatgaagttaaattgttttcgtataagctata 47946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 29205762 - 29205900
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaa 135  Q
    |||||||| |||| || |||||||||||||||||||| || || |||||| ||||| ||||||| | ||  |||| |  |||||||| || | |||||||    
T  29205762 ttctatagaaaaagataaaatgaagttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaagtaggttaaaaaa 29205861  T
Q  136 gcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||| ||||||| | |||||||| ||||||||||    
T  29205862 gcttatgaaaaatgtcatacgctgttttaataagttctc 29205900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 27028805 - 27028931
Alignment:
Q  56 tgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcaga 154  Q
    ||||||||||||||||  || || |||||| | | | ||||||||| ||| |||| |||||||||||||||||| |||| |||||||||| ||||||  |    
T  27028805 tgaagttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtccta 27028904  T
Q  155 agctgttttcataagttctcctaaaca 181  Q
    ||||||||||| || |||||| |||||    
T  27028905 agctgttttcagaatttctcccaaaca 27028931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 42215365 - 42215276
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| || |||||||| |||||||| ||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||| ||||||    
T  42215365 ttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaa-gtcataagctgttttcattagttctcccaaacag 42215276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 13459588 - 13459739
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||||||  ||||| || ||||||||| || || || | || ||||||||| ||| | |||||||  ||||||  | ||||||||||||    
T  13459588 tgtataagctatttctatgataaaagataaaatgaagtcaactttttgt-gtataagctataagttgttttcataaatcatcctacagagcttatgaaaa 13459686  T
Q  124 taagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcct 176  Q
    || ||| |||| || ||||||| ||||||| |||||||||||||||||||||||    
T  13459687 taggctgaaaacagtttatgaa-aatgtcataagctgttttcataagttctcct 13459739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 33808335 - 33808403
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||||||||||||| | |||||||||||| ||| ||||| |||||||||||||||| |||||    
T  33808335 cttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaaca 33808403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 10114413 - 10114582
Alignment:
Q  7 ttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccat 104  Q
    |||| |||||||||||||  |||||||||| |||||||| |||| || |||| ||||| ||||||||| || ||||||||| | | | ||||| ||| ||    
T  10114413 ttatgatgataagtgcttatgtataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcattagctat 10114511  T
Q  105 cctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
      |||| | | |||||||||||||| |||| ||| |||||  ||||| | ||| |||||||||||||||||    
T  10114512 attggagaacatatgaaaataagctgaaaacagcatatgataaatgttataagttgttttcataagttctc 10114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 32841022 - 32840955
Alignment:
Q  116 tatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| |||| | |||||||||||||||| ||| |||||||||||||||||| ||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacag 32840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 31716258 - 31716196
Alignment:
Q  121 aaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||    
T  31716258 aaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacag 31716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 16825575 - 16825514
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||| | |||||||||||||| | ||||| ||||| ||||||||||||||||    
T  16825575 cttatgaaaataagttgaaaaagcttatgaaaattgtcataagctattttcataagttctcc 16825514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 26771210 - 26771366
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| ||||||||||||  || |||| || |||||||||||| || || |||||| | | | || |||||  ||  | || | |||||||||||||    
T  26771210 ataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataa 26771309  T
Q  127 gctaaaaaag-cttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    | | |||||| ||| |||| | ||||| |||||||||||||||||||||| ||||||    
T  26771310 gttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaaacag 26771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 31751596 - 31751532
Alignment:
Q  113 gcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcct 176  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||| | ||||| |||||    
T  31751596 gcttatgaaaataagctgaaaatagcttatgaacaatgtcataagctgtttacgtaagtcctcct 31751532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 1930046 - 1930129
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||| ||| |||  | ||| |||||||||||| |||| |||||||||||||||||| || ||||||||| |||||||||    
T  1930046 ttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcc 1930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 4558740 - 4558850
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||||||| ||||| || |||| |||||||||| ||||| | || |||||| | | | | ||||||| ||||| || |||||||| |||    
T  4558740 tgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaa 4558839  T
Q  124 taagctaaaaa 134  Q
    ||| |||||||    
T  4558840 taaactaaaaa 4558850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 7646148 - 7646305
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||  ||||  | |||| ||||||||||||||| || ||| |||||   | |||||||||||   || ||| |||||||| |||    
T  7646148 tgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcataagctgaccaggagagcttatggaaa 7646247  T
Q  124 taagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    |||||| |||| |||| || ||| |||||| |||| |||||||||| |||||| |||||    
T  7646248 taagctgaaaatagctgatcaac-atgtcataagcagttttcataaattctcccaaaca 7646305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 10758372 - 10758235
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaa 134  Q
    |||||||| |||  || |||| ||||||||||||||| || || |||||| ||| |||| |||||| ||  | | || |||||||||| ||||| |||||    
T  10758372 ttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataagttgtctttataagctatattagcaa-cttatgaaaacaagctgaaaaa 10758274  T
Q  135 agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||| |||| | ||||| ||||||||||||||| ||||    
T  10758273 agcttttgaaaattgtcataagctgttttcataaattct 10758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 30251513 - 30251423
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagcta-aaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||| ||||   ||||||||||||||||  |||||||||||||| ||||  | ||||||||||| |||||||||| ||||||    
T  30251513 ttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttctcccaaacag 30251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 10120788 - 10120849
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||||||||||| |||| ||| |||||  ||||||| |||||||||||||||||||||    
T  10120788 cttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctc 10120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 1058114 - 1058046
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||  ||||| || ||||| ||||||| |||| ||||||| ||||||||| ||||||    
T  1058114 cttatgaaaataagcggaaaaaactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacag 1058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 28763417 - 28763469
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| | ||| | |||||||||||||||||||||| ||||||    
T  28763417 aaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacag 28763469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 35644033 - 35643957
Alignment:
Q  107 tggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| |||||||||||||||| | ||||||||||||||| | ||||| || || |||||||||||| ||| ||||||    
T  35644033 tggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacag 35643957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37444568 - 37444485
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagct 82  Q
    ||||||||||||||||||| ||||  |||||||||| | |||||  |||| || || | |||||||||||||||||| ||||||    
T  37444568 aagcacttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct 37444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 7645959 - 7646030
Alignment:
Q  63 aaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||||||||| | ||||||||| ||| | ||||||||| | |||| |||||||||| ||||||||| ||||    
T  7645959 aaattgttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaa 7646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 13652157 - 13652260
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||| |||| ||| |||||||| ||||||||||| | |||| ||||  || | || |||||| || ||||| |||||| | |||    
T  13652157 tgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaa 13652256  T
Q  124 taag 127  Q
    ||||    
T  13652257 taag 13652260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 13710800 - 13710903
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||| |||| ||| |||||||| ||||||||||| | |||| ||||  || | || |||||| || ||||| |||||| | |||    
T  13710800 tgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaa 13710899  T
Q  124 taag 127  Q
    ||||    
T  13710900 taag 13710903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16211039 - 16210953
Alignment:
Q  1 aagcacttatcatgataagtgct--tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    ||||||||||||||||| |  ||  ||||||||||| ||||||||||||  || |||| |||||| ||||||||| | |||||||||    
T  16211039 aagcacttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctata 16210953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 20672764 - 20672815
Alignment:
Q  96 ataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaaca 146  Q
    |||||| |||||||| |||||||||||||||||| |||| ||||||||||||    
T  20672764 ataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaaca 20672815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 1074080 - 1074138
Alignment:
Q  26 tataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctat 84  Q
    ||||||||| ||||||||||||| ||  ||||||||||||||| ||| || ||||||||    
T  1074080 tataagctatttctatagtaaaagatacaatgaagttaaattgattttgtataagctat 1074138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 3537160 - 3537098
Alignment:
Q  23 ttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    |||||||||| | |||||||| |||| || |||| |||| ||||||||||||| |||||||||    
T  3537160 ttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctata 3537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 12851187 - 12851276
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||  |||| || |||||||||||||||||  |||| | |||||||||| ||| | |||||||||||||||||| ||| ||||||    
T  12851187 ttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaaca-tgttataagctgttttcataagttttcccaaacag 12851276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 12976251 - 12976313
Alignment:
Q  121 aaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| |||||||||| |||| | ||| |||||||||| ||||||||||| ||||||||    
T  12976251 aaataagctgaaaaaagcttttgaaaattgttagaagctgttctcataagttctactaaacag 12976313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 26473811 - 26473730
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaa-aagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||| ||||| || |||||||||||||||| |||||  |||||||  || |||||| |||||||||||||||| ||||    
T  26473811 ttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagac-atgtcataagctgttttcataagctctc 26473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 34551096 - 34551166
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagc 128  Q
    |||| ||||||||||| |||||| |||| ||| | ||| ||||  |||||||| |||||||||||||||||    
T  34551096 aagtcaaattgttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaataagc 34551166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 2458623 - 2458543
Alignment:
Q  95 cataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| ||||| || |||||||| |||||| || |||| |||||||||||| || || ||||||| ||||||||||||||    
T  2458623 cataagctatcctagagagcttatggaaataaactgaaaacagcttatgaaca-tgccataagctgtcttcataagttctcc 2458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 10383915 - 10383975
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttc 172  Q
    |||||||| |||||||||  ||| |||||||||| ||||||| |||||||||||||||||||    
T  10383915 agcttatggaaataagctgtaaacagcttatgaa-aatgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 27492970 - 27493031
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||||| | |||| |||||||||||||||||| ||  |||||||||||| |||||    
T  27492970 ttatgaaaataagttgaaaatagcttatgaacaatgtcacaacttgttttcataagctctcc 27493031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 1113090 - 1113142
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttca 165  Q
    ||||||||||| ||||||||| ||||||||||||||||   ||||||||||||    
T  1113090 cttatgaaaattagctaaaaacagcttatgaacaatgttttaagctgttttca 1113142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 10075610 - 10075570
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaa 133  Q
    ||||||||| ||||| || ||||||||||||||||||||||    
T  10075610 ttcataagctatcctagagagcttatgaaaataagctaaaa 10075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 35220782 - 35220707
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataa 168  Q
    ||||||||| || ||||| ||||||| ||||||||||||||| ||||||||  | |||||| || ||||||||||||    
T  35220782 ttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggc-atgtcataaactgttttcataa 35220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 9093705 - 9093533
Alignment:
Q  5 acttatcatgataagtgcttgt--ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagcc 102  Q
    ||||||||||||||| |||| |  |||||||| |||||||  |||| || |||| |||||||||||||||||| ||||||||| | | | |||||||||     
T  9093705 acttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T
Q  103 atcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
     || | || | |||| ||||||||||| |||| || |||| |||||||||| ||||| |||||||||| ||||    
T  9093605 gtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataagctctc 9093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 9912229 - 9912160
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  9912229 cttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacag 9912160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 2734995 - 2735159
Alignment:
Q  7 ttatcatgataagtgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcc 106  Q
    ||||||||||||||  || |||||||||  ||||||  |||| || |||| |||||||||| |||| || ||| ||||| | | | ||||||||| |||     
T  2734995 ttatcatgataagtaatt-tataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatct 2735093  T
Q  107 tggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    || | | |||||||||||||||  |||| |||||||||| ||||||| |||| |||||||||||||    
T  2735094 tgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccgttttcataagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 13907573 - 13907678
Alignment:
Q  70 tttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataa 168  Q
    |||||| ||| ||||| ||| | ||||||||||||| |||| |  |||||||||||| || |||| | ||| ||||||||||||||||||||||||||||    
T  13907573 tttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataa 13907672  T
Q  169 gttctc 174  Q
     |||||    
T  13907673 attctc 13907678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 20368279 - 20368157
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtc 151  Q
    |||||||||| ||||||||| || | || |||| ||| | |||||||||  || |||| | |||||||||||||| | |||  ||||||||||| |||||    
T  20368279 aaatgaagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaac-atgtc 20368181  T
Q  152 agaagctgttttcataagttctcc 175  Q
    | ||| ||||||||||||||||||    
T  20368180 ataagttgttttcataagttctcc 20368157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 28641789 - 28641732
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataag 169  Q
    ||||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||    
T  28641789 agcttatgaaaataagctaaaaacagcttatgaac-atgttataagctgttttcataag 28641732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 264293 - 264373
Alignment:
Q  6 cttatcatgataagtgct--tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctat 84  Q
    ||||||||||||||||||  | ||||||||| ||||| || |||| || |||| ||||||||| |||||||| ||||||||    
T  264293 cttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctat 264373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 835062 - 834997
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    |||||||||||||||| ||||| |||||| || ||||  ||||  |||||||||||||||||||||    
T  835062 cttatgaaaataagctgaaaaaacttatggacgatgtttgaagtagttttcataagttctcctaaa 834997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 34430520 - 34430447
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttca 165  Q
    ||||||||| ||| |||| |  ||||||||||||||| ||||||||||||||  ||||||| ||||||||||||    
T  34430520 ttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgttttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 848022 - 848090
Alignment:
Q  115 ttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| ||||||||||| ||| ||||||| |||| ||||| ||||||||| | ||||||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacag 848090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 9559443 - 9559391
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| ||||||||||||||||   ||||||||||||||| |||||||||||||    
T  9559443 aaaacagcttatgaacaatgttgtaagctgttttcataacttctcctaaacag 9559391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 1575928 - 1575986
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||||||||||| |||||| |||||||||||| ||||| ||| ||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaaca-tgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 31624123 - 31624181
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||||||||||| | |||| |||||||||||| ||||| ||||||||||||||||||||    
T  31624123 ttatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 32386652 - 32386581
Alignment:
Q  63 aaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||||||||| | |||| |||||||| | ||||| ||  |||||||| |||||||||||||||||| ||||    
T  32386652 aaattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaa 32386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 33832309 - 33832243
Alignment:
Q  116 tatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||||||| | ||||| |||| ||||| ||| ||||||||||||||||| |||||||    
T  33832309 tatgaaaataagctaaaaacaacttataaaca-tgtcataagttgttttcataagttctcttaaacag 33832243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 696483 - 696531
Alignment:
Q  123 ataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  696483 ataagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 29274357 - 29274296
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    ||||||||||| |||||||| |||| || |||| |||| ||||||||||| | |||||||||    
T  29274357 tgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctata 29274296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 29660107 - 29660054
Alignment:
Q  116 tatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataag 169  Q
    ||||||||||| || |||||||||||| | ||||||| |||||||||| |||||    
T  29660107 tatgaaaataaactgaaaaagcttatggaaaatgtcataagctgtttttataag 29660054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 31813174 - 31813255
Alignment:
Q  95 cataagccatcctggaaagcttatgaaaataagctaaaaaag-cttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||| ||| |||| | | |||||||||||||| |||| | |||||||||||| ||| ||||  ||||||||||||||||    
T  31813174 cataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcc 31813255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 4324512 - 4324472
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaa 133  Q
    ||||||||| |||||||||| |||||| |||||||||||||    
T  4324512 ttcataagctatcctggaaaacttatgcaaataagctaaaa 4324472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 31671168 - 31671092
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    |||||||||||||||| | ||||||||| | | | ||| ||| | ||||| || |||||||||||||||||| ||||    
T  31671168 aagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 48469989 - 48470144
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||||||| ||||| || |||| || |||| ||||||||||||||| || ||   |||| ||| | ||||||||| ||  || | | |||||||| ||||    
T  48469989 ataagctatttctacagcaaaagataaaattaagttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataa 48470088  T
Q  127 gct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||| ||||||||||||||| |||| || |||||||||||||||||||||| |||||    
T  48470089 gctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaaaca 48470144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 17248531 - 17248653
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaaagcttatgaacaatgtcagaagc 157  Q
    ||||||||||||||| || ||||||||| | | | ||||||||  ||| | || | |||||||||||||| ||||  |||||||||||||||| | ||||    
T  17248531 aagttaaattgtttttgtataagctataagctcttttcataag--atcttagagaacttatgaaaataaggtaaatcagcttatgaacaatgttataagc 17248628  T
Q  158 tgttttcataagttctcctaaacag 182  Q
    |||||| ||||||||||| ||||||    
T  17248629 tgtttttataagttctcccaaacag 17248653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 33678704 - 33678874
Alignment:
Q  6 cttatcatgataagtgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatc 105  Q
    |||||||||||||| |||| ||||||||  | | |||| |||| || || | ||||||||| ||||| ||  |||||||| | | | ||||||||| |||    
T  33678704 cttatcatgataagagcttatataagctcttcccatagcaaaagataaagtaaagttaaatggtttttgtaaaagctataagctgttttcataagctatc 33678803  T
Q  106 ctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
     |||||| ||| |||||||||| | |||| | || ||||||||||| | ||| ||||||||||||||||||    
T  33678804 ttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctcc 33678874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 40689107 - 40688993
Alignment:
Q  31 gctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct- 129  Q
    |||| |||||||| |||| || |||| |||||||||| ||||| | ||||||||| | | | ||||||||| |||||||| | ||||||||||||||||     
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctc 40689008  T
Q  130 aaaaaagcttatgaa 144  Q
    |||| ||||||||||    
T  40689007 aaaacagcttatgaa 40688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 38499974 - 38499889
Alignment:
Q  91 tcttcataagccatcctggaaagcttatgaaaataagcta-aaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||| ||| |||| | ||||||||||||||||  |||||||||||||| ||||||| |||||||||| | |||||||||    
T  38499974 tcttcataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcc 38499889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 39967878 - 39968013
Alignment:
Q  40 atagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agct 138  Q
    |||| |||| || |||| || |||||||||||||||   ||||||| ||| | ||||||||| |||   || | || ||||||||||| | |||| ||||    
T  39967878 atagcaaaagataaaataaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagct 39967977  T
Q  139 tatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||| || |||||||||||||||||||||    
T  39967978 tatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 44989715 - 44989646
Alignment:
Q  115 ttatgaaaataagct--aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||  |||| ||||| |||||||||||||||| |||||||||||||| ||| ||||||    
T  44989715 ttatgaaaataagctgcaaaacagcttgtgaacaatgtcagaagttgttttcataagttttcccaaacag 44989646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 37832286 - 37832207
Alignment:
Q  7 ttatcatgataagtgcttgt--ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctata 85  Q
    ||||||||||||||||||||  |||| ||| |||||||| ||||||| |||| |||||| |||||||||| ||||||||||    
T  37832286 ttatcatgataagtgcttgtgtataaactatttctatagcaaaatataaaataaagttagattgttttcg-ttaagctata 37832207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 36517590 - 36517678
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||| |||| |  |||||||||||| || |||| ||||||||||||||||||  ||||||||| ||||||||||| ||||||    
T  36517590 ttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaacag 36517678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 33601448 - 33601387
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||  |||||| ||||||||||||||| | ||||| |||||||||||||||||||||    
T  33601448 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 33601387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20881789 - 20881654
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    |||||||||||||||||||  |||  |||| |||||  ||||||| |||| || ||| ||||||||||||||| |||  |||||||| ||| | ||||||    
T  20881789 aagcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaagttaaattgtttccgtacaagctataagttgttttcata 20881690  T
Q  99 agccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    | | ||| |  | | |||||||||||||||| ||||    
T  20881689 aactatcttaaagaacttatgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 15740448 - 15740390
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    ||||||||||||| |||||| |||||||||||| ||||| ||| ||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaaca-tgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 30496646 - 30496757
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagctta-tgaaa 122  Q
    ||||||| ||| |||||||  ||||||| |||| |||| ||||||||||||| ||| ||||| ||| | ||||||| |  ||| ||| |||||| |||||    
T  30496646 tgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcataaactgtcccggatagcttattgaaa 30496745  T
Q  123 ataagctaaaaa 134  Q
    ||||||| ||||    
T  30496746 ataagctgaaaa 30496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 47177553 - 47177687
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    |||||||||| ||||||||  |||  ||||||| || |||||||  ||||||  |||  |||||||||||||||| | ||||||||| | | | |||| |    
T  47177553 aagcacttatgatgataagcccttctgtataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttcaaa 47177652  T
Q  99 agccatcctggaaagcttatgaaaataagctaaaa 133  Q
    ||| ||| |||| |  |||||||||||||||||||    
T  47177653 agctatcttggagaatttatgaaaataagctaaaa 47177687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 19302601 - 19302539
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||| | ||||||| ||||||| | ||||| ||||||||||||||| ||||||    
T  19302601 cttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgttttcataaattctcc 19302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 20526481 - 20526539
Alignment:
Q  117 atgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||||||||||||| |||||| ||| ||||| | || ||||||||||||||||||    
T  20526481 atgaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctc 20526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 27481422 - 27481320
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||  |||  || ||| ||||| ||| ||||| | | ||||||||| ||||| ||||||||| ||| |||| |||||||| |||    
T  27481422 tgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaa 27481323  T
Q  124 taa 126  Q
    |||    
T  27481322 taa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 45790463 - 45790397
Alignment:
Q  114 cttatgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaac 180  Q
    |||||||||||||||| ||||||||| | || | ||||| ||| | |||||||||||||||| ||||    
T  45790463 cttatgaaaataagctgaaaaagcttttaaaaattgtcataagttattttcataagttctccgaaac 45790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 12110331 - 12110447
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtc 151  Q
    |||| |||| |||||||||| || ||||||||| | | | ||||||||| ||| || | | ||||||||||||| ||||||| || || ||||| |||||    
T  12110331 aaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaac-atgtc 12110429  T
Q  152 agaagctgttttcataag 169  Q
    | ||| ||||||||||||    
T  12110430 ataagttgttttcataag 12110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 17944444 - 17944323
Alignment:
Q  51 tgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatg 149  Q
    |||||| ||||||||||||||| || || | | || ||| | ||||||||  ||| |||| |  |||||||| |||||| |||||||| |||||| | ||    
T  17944444 tgaaataaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtg 17944345  T
Q  150 tcagaagctgttttcataagtt 171  Q
    ||| |||||||||| |||||||    
T  17944344 tcataagctgtttttataagtt 17944323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 20526967 - 20526906
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||||||||||| |||| | ||||| |||||| ||| ||||||||||||| |||||||    
T  20526967 cttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcatcagttctc 20526906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 25635592 - 25635547
Alignment:
Q  134 aagcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    ||||||||||||||| ||| ||| |||||||||||||||| |||||    
T  25635592 aagcttatgaacaatatcataagttgttttcataagttctactaaa 25635547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 39393720 - 39393589
Alignment:
Q  9 atcatgataagtgcttgt-ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcct 107  Q
    ||||||||||| |||| | |||||||| |||||||| |||| ||  | |||| ||||||| |||| || | ||||||| ||| | ||||||||| ||  |    
T  39393720 atcatgataagcgcttattataagcta-ttctatagcaaaacattgattgaatttaaattatttttgtatgagctataagtttttttcataagctatt-t 39393623  T
Q  108 ggaaagcttatgaaaataagctaaaaaagcttat 141  Q
    ||| | |||||||||||||||||||| |||||||    
T  39393622 ggagaacttatgaaaataagctaaaacagcttat 39393589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 39629978 - 39629928
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| | ||||| |||||||||||  ||||||||||||||||    
T  39629978 aaaaaagcttatgaaaattgtcataagctgttttc--aagttctcctaaacag 39629928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 43219833 - 43219785
Alignment:
Q  123 ataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  43219833 ataagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 21568516 - 21568464
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||| |||||||||| | ||| | |||||||||||||||||||||| ||||||    
T  21568516 aaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacag 21568464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 28340970 - 28340878
Alignment:
Q  26 tataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttat 118  Q
    |||| |||| || |||| ||||| |||||||||||| |||||||| || | ||||||||| | | | ||||||||| ||||| || |||||||    
T  28340970 tatatgctatttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 36982415 - 36982471
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaag 80  Q
    ||||||||| | ||||||| | ||| || ||||||||||||||| ||||||||||||    
T  36982415 tgtataagcaatttctatattgaaagataaaatgaagttaaattattttcgtttaag 36982471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 38010695 - 38010779
Alignment:
Q  63 aaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaaca 146  Q
    ||||||||||| | ||||||||| | | | ||||||| | ||||| || | |||||| |||||||||||||| ||||||||||||    
T  38010695 aaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaaca 38010779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 45593577 - 45593629
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||||||  || |||||| ||||||||||| ||||||    
T  45593577 aaaaaagcttatgaaaaatgtcatcagatgtttttataagttctcccaaacag 45593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 37842483 - 37842325
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||||||| |||| ||||||| |||||||| ||| ||||  ||||||||| ||| | ||||||||| ||| || | | ||||| ||||    
T  37842483 tgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaa 37842384  T
Q  124 taagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| ||||  |||||||||| ||||||  || |||||||||||||||| || |||||    
T  37842383 taagctgaaaactgcttatgaac-atgtcattagatgttttcataagttctactgaacag 37842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 31517890 - 31517710
Alignment:
Q  1 aagcacttatcatgataagtgcttgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataag 100  Q
    ||||| |||||||||||||| | | |||| |||| ||||| |  |||| || |||| ||||||||||| |||| | ||||||||| | | |||||||||     
T  31517890 aagcatttatcatgataagtacatatata-gctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataat 31517792  T
Q  101 ccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |  || |||| |||||||||||||||||| |||| ||||||||||| ||||||  || |||||| ||||||||||| ||||||    
T  31517791 ctgtcttggagagcttatgaaaataagctgaaaacagcttatgaac-atgtcatgagttgttttgataagttctcccaaacag 31517710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 1432457 - 1432616
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||||||||||||| || ||||  |||| |||||||||  | |||||||||  || | ||||||| | ||| |||| | |||||||||     
T  1432457 tgtataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaag 1432556  T
Q  124 taagctaaaaaag-cttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||  | | |||||||||||||||| | ||| |||||||||||||| | ||||||    
T  1432557 taagctaagtatgtcttatgaacaatgtcatacgctattttcataagttcttccaaacag 1432616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 3887670 - 3887600
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacagc 183  Q
    |||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||| | |||||||    
T  3887670 cttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacagc 3887600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 24915176 - 24915019
Alignment:
Q  27 ataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataa 126  Q
    |||| ||| |||||||| | || || |||| ||||||||||||||| || || |||||| | | | |||||||||  || |||| | ||| |||||||||    
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataa 24915077  T
Q  127 gct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacagc 183  Q
    | | ||||||||||||||| ||||||| ||| ||||||||||| || ||| |||||||    
T  24915076 gttgaaaaaagcttatgaaaaatgtcataagttgttttcataaattgtcccaaacagc 24915019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 47498877 - 47498809
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||||||||||||| | |||||||||||| ||| ||||| |||||||||||||||| |||||    
T  47498877 cttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaaca 47498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 37841915 - 37842037
Alignment:
Q  1 aagcacttatcatgataagtgct--tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcata 98  Q
    |||||||||||||||||||| ||  ||||||||||| | |||||  |||  || |||| |||||||||||||||||| ||||||||| ||| |   ||||    
T  37841915 aagcacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctatatgttgttcgcata 37842014  T
Q  99 agccatcctggaaagcttatgaa 121  Q
    ||| ||| |||| ||||||||||    
T  37842015 agctatcatggacagcttatgaa 37842037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 51695610 - 51695464
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa- 134  Q
    ||||||||||||| || |||| |||| ||||||||||||| |||| |||  | | | ||||||||| ||| |||| |  ||||||||||||||| ||||     
T  51695610 ttctatagtaaaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaat 51695512  T
Q  135 agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||| | ||| |||||  ||||||||| | ||||||    
T  51695511 agcttatgaacaatgtgataagttgtttatataagttcttccaaacag 51695464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 37631597 - 37631539
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  37631597 cttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgttttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 27145863 - 27145714
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| ||||| |  || | || |||| || ||||||| ||||||| |||  |||| ||||||||||| |   ||| || | | ||||||||||    
T  27145863 tgtataagctatttctacaacaacagataaaataaatttaaattattttcgtataatttataagttatcttcattaaatatcttgaagaacttatgaaaa 27145764  T
Q  124 taagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttct 173  Q
    |||||| ||||| |||||||||||||||| |||  |||||| ||||||||    
T  27145763 taagctgaaaaaacttatgaacaatgtcataagtcgttttcttaagttct 27145714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 11639456 - 11639389
Alignment:
Q  112 agcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||| ||| |||||    
T  11639456 agcttatgaaaataagctaaaaacagcttatggac-atgtcataagctgttttcataagctcttctaaa 11639389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 27820464 - 27820337
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| || ||||||||| ||| |||| ||| ||||||||||  || ||||||||| | | | || |||||| ||| |||| |  |||||||||    
T  27820464 tgtataagctatttttatagtaaa-tataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaa 27820366  T
Q  124 taagct-aaaaaagcttatgaacaatgtc 151  Q
    |||||| |||| |||||||||||||||||    
T  27820365 taagctgaaaatagcttatgaacaatgtc 27820337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 37473435 - 37473503
Alignment:
Q  114 cttatgaaaataagcta-aaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||| |||||||| ||||||||| |||||    
T  37473435 cttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctcccaaaca 37473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 49938779 - 49938847
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    |||||||||||||| | |||||||||| |||| | ||||| |||||||||||||||||||||| |||||    
T  49938779 cttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaaca 49938847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 11941296 - 11941363
Alignment:
Q  116 tatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| |||| |||||||||||||||| | ||||| |||||||||| ||||| ||||||    
T  11941296 tatgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacag 11941363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 37811863 - 37811944
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||| |||| |||| ||| ||||||| | |||| || ||||||||| ||||| |||||||||||||||||||||    
T  37811863 ttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaaca-tgtcataagctgttttcataagttctc 37811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 9656604 - 9656713
Alignment:
Q  36 ttctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaa 134  Q
    |||||||| |||| || |||| |||||||||| ||||| | ||||||||| | | | ||||||||| ||||||||    ||||||||||||||| ||||     
T  9656604 ttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaac 9656703  T
Q  135 agcttatgaa 144  Q
    ||||||||||    
T  9656704 agcttatgaa 9656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 15477597 - 15477658
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||| ||||||| |||||||||| |||| | ||||| |||||||||||||||||||||    
T  15477597 cttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttctc 15477658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 38503503 - 38503442
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||||||||||||| |||| | |||||||||||||||| | ||||||| |||||||||||    
T  38503503 cttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttctc 38503442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 4699680 - 4699597
Alignment:
Q  87 gttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagt 170  Q
    ||||| ||||||| | |||| ||| |||||||  |||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  4699680 gttattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaac-atgtcataagttgttttcataagt 4699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 27820233 - 27820166
Alignment:
Q  115 ttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| |||| |||||||||||||||| | ||||| ||||||||| |||||| ||||||    
T  27820233 ttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacag 27820166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 41184695 - 41184619
Alignment:
Q  107 tggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||| |||||||||||||| | |||||| |||||||| | ||||| ||||| ||||||||||||||  |||||||    
T  41184695 tggaaaacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagctattttcataagttctagtaaacag 41184619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 49888709 - 49888813
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaa 123  Q
    ||||||||||| |||| | | |||| || |||| ||||| |||||||||||| ||||||||  ||| | ||||||||| ||| | || | ||||||||||    
T  49888709 tgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 49888808  T
Q  124 taagc 128  Q
    |||||    
T  49888809 taagc 49888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 2295150 - 2295197
Alignment:
Q  135 agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||| | ||||| |||||||||||||||||||||| ||||||    
T  2295150 agcttatgaaaattgtcataagctgttttcataagttctcccaaacag 2295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 14576777 - 14576623
Alignment:
Q  28 taagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataag 127  Q
    ||||||| ||| ||||||||  || |||| ||||||||||||||| || || ||||||  || | || |||||| ||  | || | ||| ||||||||||    
T  14576777 taagctatttccatagtaaaggataaaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataag 14576679  T
Q  128 ct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    || |||||||||| |||| | ||||| |||||||||||| ||||| ||| ||||||    
T  14576678 ctgaaaaaagcttttgaaaattgtcataagctgttttcacaagttgtcccaaacag 14576623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 27976639 - 27976694
Alignment:
Q  117 atgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||| |||||| |||||    
T  27976639 atgaaaataagctgaaaaaagcttatgaaaaatgtcataagctattttcaaaagtt 27976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 28689508 - 28689430
Alignment:
Q  96 ataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    |||||| ||| ||||||||||||||||||||||| |||| | |||||| || |||||| ||||||||| | |||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggac-atgtcataagctgtttccgtaagttctc 28689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 43338127 - 43338213
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    ||||||||| | | |||| |||||||||||||| ||| |||| || |||||||| |||||| ||||||||| |||||||||| |||||    
T  43338127 ttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaac-atgtcataagctgtttccataagttcttctaaa 43338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 5894193 - 5894155
Alignment:
Q  137 cttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  5894193 cttatgaacaatgacataagctgttttcataagttctcc 5894155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 7218173 - 7218099
Alignment:
Q  53 aaatgaagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataag 127  Q
    |||| |||| ||||||||||| | ||||||||| ||| | ||||||| | |||||||| | ||||||||||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataag 7218099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 7244746 - 7244676
Alignment:
Q  64 aattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    |||||||||||| ||||||||||||| | ||||||||| ||| |||| | | |||||||||| | ||||||    
T  7244746 aattgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaaaataggttaaaaa 7244676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 15687196 - 15687142
Alignment:
Q  29 aagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagcta 83  Q
    |||||| |||||||  ||||||| |||| |||||||||||||||||| |||||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagcta 15687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 17577743 - 17577689
Alignment:
Q  119 gaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttc 172  Q
    |||||||||||||| | |||||||||||||||| |  ||||||||||||||||||    
T  17577743 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 17577689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 27970332 - 27970270
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    ||||||||||||| || ||||||||||||||| ||||||| || | ||||| |||||||||||    
T  27970332 cttatgaaaataaactgaaaaaagcttatgaaaaatgtcataaaccgtttttataagttctcc 27970270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 35925703 - 35925780
Alignment:
Q  95 cataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttc 172  Q
    ||||||| ||| |||| || ||||| ||||||| | |||| |||||||||||| ||||| |||||||||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 44422684 - 44422746
Alignment:
Q  67 tgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct 129  Q
    ||||||| | ||||||||| | ||| || |||||| |||||||| ||||||||||||||||||    
T  44422684 tgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 45975701 - 45975791
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||| |||| |  ||||||||||||||| |||| |||||||||| ||||| | |  ||||||||||| |||||||| |||||    
T  45975701 ttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttctcctgaacag 45975791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 1255559 - 1255510
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttc 73  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||| |||||    
T  1255559 tgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttc 1255510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 4481966 - 4482022
Alignment:
Q  118 tgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||||||| ||||||||||| |||| | ||| |||||||||||||||||    
T  4481966 tgaaaataagctaaaaacagcttatgaac-atgtaataagttgttttcataagttctc 4482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 6292518 - 6292574
Alignment:
Q  107 tggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgtttt 163  Q
    |||| |||||||||||||||||| |||| ||||||||||| |||||| ||||||||||    
T  6292518 tggagagcttatgaaaataagctgaaaacagcttatgaac-atgtcataagctgtttt 6292574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 7862115 - 7862176
Alignment:
Q  119 gaaaataagctaaa-aaagcttatgaacaatgtcagaagctgttttcataagttctcctaaa 179  Q
    |||||||||| ||| ||||||| |||| | |||||||||||||||| ||| |||||||||||    
T  7862115 gaaaataagccaaagaaagcttgtgaaaattgtcagaagctgttttaataggttctcctaaa 7862176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 7941638 - 7941707
Alignment:
Q  114 cttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||| | |||| |||||  ||||||||||| ||||||||||||||| |||| | ||||||    
T  7941638 cttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacag 7941707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 10280681 - 10280749
Alignment:
Q  114 cttatgaaaataagctaa-aaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||||||||| | ||||||||||||||| ||  | ||| ||||||||||||||||||| |||||    
T  10280681 cttatgaaaataagctgacaaaagcttatgaaca-tgaaataagttgttttcataagttctcctgaacag 10280749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15784252 - 15784336
Alignment:
Q  1 aagcacttatcatgataagtgctt--gtataagctaattctatagtaaaata-tgaaatgaagttaaattgttttcgtttaagct 82  Q
    |||||||||| |||||||| ||||  |||||||||| ||||| |||||||   | |||| |||||||||||||||||| ||||||    
T  15784252 aagcacttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaattgttttcgtataagct 15784336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 30286540 - 30286499
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    ||||||||||||||| | ||||| ||||||||||||||||||    
T  30286540 aaaaaagcttatgaaaattgtcataagctgttttcataagtt 30286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 37295812 - 37295771
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataa 99  Q
    |||||||||||||||||||||||||||| ||| | |||||||    
T  37295812 aagttaaattgttttcgtttaagctataagttgttttcataa 37295771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 3234107 - 3233991
Alignment:
Q  60 gttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagct 158  Q
    ||||||||||||| || || |||||| ||| | || |||||| ||  |||| | ||||||||||||||   |||||| |||||||| | ||| | ||| |    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagtt 3234008  T
Q  159 gttttcataagttctcc 175  Q
    |||||||||||||||||    
T  3234007 gttttcataagttctcc 3233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 5709663 - 5709727
Alignment:
Q  118 tgaaaataagctaaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    |||||||||| | |||||||||||||| | || || ||||| ||||||||| |||||| ||||||    
T  5709663 tgaaaataagttgaaaaagcttatgaaaattgccaaaagctattttcataaattctcccaaacag 5709727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 7472287 - 7472363
Alignment:
Q  58 aagttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    ||||||||||||||| || ||| ||||| | | | | ||||||| ||| |||| |||||||||||||||||| ||||    
T  7472287 aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 10199448 - 10199385
Alignment:
Q  112 agcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcc 175  Q
    |||||||||||||||||| |||| | ||||||||| |||||| ||||| ||||||| ||||||||    
T  10199448 agcttatgaaaataagctgaaaacaacttatgaac-atgtcataagctattttcatgagttctcc 10199385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 17603476 - 17603360
Alignment:
Q  60 gttaaattgttttcgtttaagctatacgttatcttcataagccatcctggaaagcttatgaaaataagcta-aaaaagcttatgaacaatgtcagaagct 158  Q
    ||||||||||||| || || |||||| ||| | || |||||| ||  |||| | ||| |||||||||| |  |||||| ||||||| | ||||| |||||    
T  17603476 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagct 17603377  T
Q  159 gttttcataagttctcc 175  Q
    |||||| ||||||||||    
T  17603376 gttttcgtaagttctcc 17603360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 19389912 - 19390002
Alignment:
Q  93 ttcataagccatcctggaaagcttatgaaaataagctaaaaa--agcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||| ||| |||| ||||| |||||||||||||||||  | ||||||||| || ||| ||| | |||||||| ||||||| ||||||    
T  19389912 ttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaac-atatcataagtttttttcatacgttctcccaaacag 19390002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 26462003 - 26461959
Alignment:
Q  90 atcttcataagccatcctggaaagcttatgaaaataagctaaaaa 134  Q
    |||||||||||| |||||| | |||||||||||||||||| ||||    
T  26462003 atcttcataagctatcctgcagagcttatgaaaataagctgaaaa 26461959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 38480618 - 38480550
Alignment:
Q  109 gaaagcttatgaaaataagctaaaaa-agcttatgaacaatgtcagaagct-gttttcataagttctcc 175  Q
    |||| ||||||||||||||||||||| || |||||| |||||||| |||||  ||||||| ||||||||    
T  38480618 gaaaacttatgaaaataagctaaaaacagtttatgagcaatgtcataagctatttttcattagttctcc 38480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 41505751 - 41505791
Alignment:
Q  148 tgtcagaagctgttttcataagttctcctaaacagcttatg 188  Q
    ||||| |||||||||||||||||||||| ||||| ||||||    
T  41505751 tgtcataagctgttttcataagttctcccaaacaacttatg 41505791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 51929577 - 51929509
Alignment:
Q  114 cttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaaca 181  Q
    |||||| ||||||| | ||||||||||||||| | ||||| ||||||||||||| | |||||| |||||    
T  51929577 cttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcatgaattctcccaaaca 51929509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 22243 - 22321
Alignment:
Q  94 tcataagccatcctggaaagcttatgaaaataagct-aaaaaagcttatgaacaatgtcagaagctgttttcataagtt 171  Q
    |||||||| ||  |||||| |||||||||||||||| ||||||||||| ||| | ||||| |||||||||  |||||||    
T  22243 tcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagtt 22321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 21406 - 21348
Alignment:
Q  24 tgtataagctaattctatagtaaaatatgaaatgaagttaaattgttttcgtttaagct 82  Q
    ||||||||||| || ||||| |||| || |||| |||||||||||||||||| ||||||    
T  21406 tgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagct 21348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 9671 - 9615
Alignment:
Q  118 tgaaaataagctaaaaa-agcttatgaacaatgtcagaagctgttttcataagttctc 174  Q
    ||||||||||||||||| |||||||||||| ||| | ||| |||||||||||||||||    
T  9671 tgaaaataagctaaaaacagcttatgaaca-tgtaataagttgttttcataagttctc 9615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 1003 - 951
Alignment:
Q  130 aaaaaagcttatgaacaatgtcagaagctgttttcataagttctcctaaacag 182  Q
    ||||||||||||||| ||||||| ||||| |||| ||||||| ||| ||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacag 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1856 times since January 2019
Visitors: 4432