View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0686_low_12 (Length: 416)
Name: NF0686_low_12
Description: NF0686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0686_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 21138507 - 21138789
Alignment:
| Q |
8 |
atatcatataatgaaagagagaaaagtacaaaaaggaggggggactagagtcaaaacctcctagcaatttacaaaacgaaaattaggcataccatttcta |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21138507 |
atatcatataatgaaagagagaaaagtacaaaaaggaggggg-actagagtcaaaacctcctagcaatttacaaaacgaaaattaggcataccatttcta |
21138605 |
T |
|
| Q |
108 |
tcttgaccaaacatactaccaatgaaactaggcatctctaaccaaatagtaacatatctaaccaaatagtaagaccttgtattcctaaaccaaaagaagc |
207 |
Q |
| |
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|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
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| T |
21138606 |
tcttaaccaaacatactaccaatgaaactaggcatctcta--------------------accaaatagtaagaccttgtatgcctaaaccaaaagaagc |
21138685 |
T |
|
| Q |
208 |
aagcttatctgcacatttattaccctctctataagtatgagaaatgatataattcatttgcttaagagcaataatgcaattcttccatctatttcgtaga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21138686 |
aagcttatctgcacatttattaccctctctataagtatgagaaatgatataattcatttgcttaagagcaataatgcaattcttccatctatttcgtaga |
21138785 |
T |
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