View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0686_low_19 (Length: 358)
Name: NF0686_low_19
Description: NF0686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0686_low_19 |
 | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31000496 - 31000273
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31000496 |
taaacttgtcaacgatgcttttgatttatattctgaaatggttgctaagagaattggccttgatgttttcacttacaatgctttaattagtggtttttct |
31000397 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31000396 |
gctgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtatacctttaatatactggttgatggtt |
31000297 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
31000296 |
tttgtaaggatggtagggtgaaag |
31000273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 24890800 - 24890595
Alignment:
| Q |
5 |
cttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttcccactg |
103 |
Q |
| |
|
||||| || ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
24890800 |
cttgttaatgatgcttttgatttatattctcaaatggttgctaagagaatttgccctgatgttttcacttacaatgctttaattagtggtttttccgctg |
24890701 |
T |
|
| Q |
104 |
tttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttg |
203 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
24890700 |
tttctaaattgaactatgcaattgatttgttcaataaaatgaaaaaggaaaacatcaacccaaatgtgtatacctttaatatactggttgatggcttttg |
24890601 |
T |
|
| Q |
204 |
caagga |
209 |
Q |
| |
|
||||| |
|
|
| T |
24890600 |
taagga |
24890595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 24887079 - 24886856
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || ||||||||||||||||||| ||||||||| || ||||||||| ||||||||| ||||||||| ||||||||||||||||||| | |
|
|
| T |
24887079 |
taaacttgttaatgatgcttttgatttatattctgaaatggtcgcgaagagaatttctcctgatgttatcacttacagtgctttaattagtggtttttgc |
24886980 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
24886979 |
attgttggtaaattgaatgatacaattgggttgttcaataaaatgacagcggaaaatatcaacccggatgtgtatacctttaatatatcggttgatgctt |
24886880 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| ||||||||||||| |
|
|
| T |
24886879 |
tttgtaaggaaggtagggtgaaag |
24886856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 24272505 - 24272282
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
|||||||| || ||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||| ||||||||||||| ||||||| | |
|
|
| T |
24272505 |
taaacttgataatgatgcttttgatttatattctgaaatggtttctaagagaattttccctgatgttaacacttataatgctttaattaatggtttttgc |
24272406 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||||| ||||||||| | |
|
|
| T |
24272405 |
attgttggtaaattgaaagatgcaattggtttgttcaataaaatgacatcggaaaacatcaaccctgatgtgtatacttttaatatattggttgatgcat |
24272306 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
24272305 |
tttgtaaggaaggaagggtgaaag |
24272282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29834656 - 29834865
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| | |
|
|
| T |
29834656 |
taaacatgttaatgatgcttttgatttatattctgaaatggtttctaagagaatttcccctgatgttttcacttacaatgctttgattagtggcttttgc |
29834755 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||||| ||||||||| | |
|
|
| T |
29834756 |
attgttggtaaattgaaagatgcaattggtttgttcaataaaatgacattggaaaacatcaaccctgatatgtatacctttaatatattggttgatgcat |
29834855 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29834856 |
tttgtaagga |
29834865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29866090 - 29866299
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| | |
|
|
| T |
29866090 |
taaacatgttaatgatgcttttgatttatattctgaaatggtttctaagagaatttcccctgatgttttcacttacaatgctttgattagtggcttttgc |
29866189 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||||| ||||||||| | |
|
|
| T |
29866190 |
attgttggtaaattgaaagatgcaattggtttgttcaataaaatgacattggaaaacatcaaccctgatatgtatacctttaatatattggttgatgcat |
29866289 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29866290 |
tttgtaagga |
29866299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29349156 - 29348933
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || |||||||||||||||| |||||||||| ||||| | ||| || |||||| | ||||||| ||||||||||||||||||| | |
|
|
| T |
29349156 |
taaacttgttaatgaagcttttgatttatattctgaaatggtttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgc |
29349057 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| | || |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||||| ||||||| |||| |||||||||| | |
|
|
| T |
29349056 |
attcttggtaaattgaatgatgcaattggtttgttcaataaaatgatatcggaagaaatcaaccctgatgtgtatacctttagtatattggttgatggat |
29348957 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
29348956 |
tttgtaaggaaggaagggtgaaag |
29348933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 24264297 - 24264087
Alignment:
| Q |
14 |
gatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttcccactgtttctaaat |
112 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||| ||||||| | || || ||||||| | ||||||||||||||| ||| || |||| ||||| |
|
|
| T |
24264297 |
gatgcttttgatttatattctgaaatggtttctaggagaatttcttccaatattgtcacttatagtgctttaattagtggcttttgcattgttggtaaat |
24264198 |
T |
|
| Q |
113 |
tgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaaggatgg |
212 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||||| ||||||||| ||||| ||||| || |
|
|
| T |
24264197 |
tgaaagatgcaattggtttgttcaataaaatgacatcggaaaacatcaaccctgatgtgtatacttttaatatattggttgatgcattttgtaaggaagg |
24264098 |
T |
|
| Q |
213 |
tagggtgaaag |
223 |
Q |
| |
|
|||||||||| |
|
|
| T |
24264097 |
aagggtgaaag |
24264087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29886738 - 29886947
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
29886738 |
taaacatgttaatgatgcttttgatttatattctgaaatggcttctaagagaattttccccgatgttttcacttacaatgctttaattagtggcttttgc |
29886837 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| ||||||| || ||| ||||||||||||||| || ||||||||||||| |||||| || ||||||||| ||||||||| | |
|
|
| T |
29886838 |
attgttggtaaattgaaagatgcaactgatttattcaataaaatgacatcgaaaaacatcaacccaactgtgtatacttttaatatattggttgatgcat |
29886937 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29886938 |
tttgtaagga |
29886947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24711579 - 24711743
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || ||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| | |||||||||||||||| || | |
|
|
| T |
24711579 |
taaacttgttaatgatgcatttgatttatattctgaaatggctgctaagagaatttgccctgatgttgtcacttatagtgctttaattagtggtgtttgc |
24711678 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaaccc |
164 |
Q |
| |
|
| |||| ||||||||||||||||||| | |||||||||||||||||||| || ||||||||||| |
|
|
| T |
24711679 |
attgttggtaaattgaatgatgcaatttggttgttcaataaaatgacagcagacaacatcaaccc |
24711743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29881876 - 29882099
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||| ||| ||||||||| ||| ||||| ||||||| | ||||||||||||||| ||| | |
|
|
| T |
29881876 |
taaacatgttaatgatgcttttgatttatattctgaaatggctgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgc |
29881975 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||| |||||| |||||||||| | |||||||||||| ||| ||||||| ||||||| |||| |||||||||| | |
|
|
| T |
29881976 |
attgttggtaaattgaaagatgcaattgatttgtttaataaaatgatattggaaaacatcaatccgaatgtgtatacctttagtatattggttgatggat |
29882075 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
29882076 |
tttgtaaggaaggaagggtgaaag |
29882099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29909032 - 29909255
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||| ||| ||||||||| ||| ||||| ||||||| | ||||||||||||||| ||| | |
|
|
| T |
29909032 |
taaacatgttaatgatgcttttgatttatattctgaaatggctgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgc |
29909131 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||| |||||| |||||||||| | |||||||||||| ||| ||||||| ||||||| |||| |||||||||| | |
|
|
| T |
29909132 |
attgttggtaaattgaaagatgcaattgatttgtttaataaaatgatattggaaaacatcaatccgaatgtgtatacctttagtatattggttgatggat |
29909231 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
29909232 |
tttgtaaggaaggaagggtgaaag |
29909255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29897523 - 29897731
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||||| ||||||||| || | |||| | ||||||| ||||||||||| ||| ||| | |
|
|
| T |
29897523 |
taaacatgttaatgatgcttttgatttatattctgaaatggttgcaaagagaatttatcccggtgttgttacttacagtgctttaattattggcttttgc |
29897622 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||||||||||||||||||||| | | ||||||||| |||||||||||| ||||||| |||| |||||||||| | |
|
|
| T |
29897623 |
attgttggtaaattgaaagatgcaattggtttgttcaataaaatgatattgaaaaacatcatcccggatgtgtatacctttagtata-tggttgatggat |
29897721 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29897722 |
tttgtaagga |
29897731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29073204 - 29073413
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || |||||||||||||||| |||||||||| || || ||||| ||||||||| | ||||||| ||||||||||||||| ||| | |
|
|
| T |
29073204 |
taaacttgttaatgaagcttttgatttatattctgaaatggtttctgagggaatttctcctgatgttgttacttacagtgctttaattagtgggtttttc |
29073303 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| |||| |||| |||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| || ||||||||| |||||||||| | |
|
|
| T |
29073304 |
attgttggtaaactgaaagatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacttttaatatattggttgatggat |
29073403 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29073404 |
tttgtaagga |
29073413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29105777 - 29105986
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || |||||||||||||||| |||||||||| || || ||||| ||||||||| | ||||||| ||||||||||||||| ||| | |
|
|
| T |
29105777 |
taaacttgttaatgaagcttttgatttatattctgaaatggtttctgagggaatttctcctgatgttgttacttacagtgctttaattagtgggtttttc |
29105876 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| |||| |||| |||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| || ||||||||| |||||||||| | |
|
|
| T |
29105877 |
attgttggtaaactgaaagatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacttttaatatattggttgatggat |
29105976 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29105977 |
tttgtaagga |
29105986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29211636 - 29211433
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||| ||||| ||||| || ||||| | ||||||| ||||||||||||||| ||| | |
|
|
| T |
29211636 |
taaacatgttaatgatgcttttgatttatattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttc |
29211537 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
|||||| |||| |||| |||||| ||| | |||| |||||||||| | ||||||||||||| ||||||||||| || ||||||||| ||||||||| || |
|
|
| T |
29211536 |
actgttggtaaactgaaagatgcagttgatctgtttaataaaatgatatcggaaaacatcaaaccggatgtgtatacttttaatatattggttgatgttt |
29211437 |
T |
|
| Q |
200 |
tttg |
203 |
Q |
| |
|
|||| |
|
|
| T |
29211436 |
tttg |
29211433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29893994 - 29894203
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||| ||||| ||||| || ||||| | ||||||| ||||||||||||||| ||| | |
|
|
| T |
29893994 |
taaacatgttaatgatgcttttgatttatattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttc |
29894093 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
|||||| | || |||| |||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| || ||||||||| |||||||||| | |
|
|
| T |
29894094 |
actgttggtcaactgaaagatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacttttaatatattggttgatggat |
29894193 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29894194 |
tttgtaagga |
29894203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 29905108 - 29905252
Alignment:
| Q |
15 |
atgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttcccactgtttctaaatt |
113 |
Q |
| |
|
|||||||||||||||||| | |||||||| ||||||||||| ||||||| || |||||||||||||||||||||||| ||| || |||| |||||| |
|
|
| T |
29905108 |
atgcttttgatttatattctaaaatggtttctaagagaatttcccctgatattctcacttacaatgctttaattagtgacttttgcattgttggtaaatt |
29905207 |
T |
|
| Q |
114 |
gaatgatgcaattggtttgttcaataaaatgacagcggaaaacat |
158 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
29905208 |
gaaagatgcaattggttttttcaataaaatgacattggaaaacat |
29905252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29928714 - 29928937
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| ||||||| | ||||||||||||||| ||| | |
|
|
| T |
29928714 |
taaacatgttaatgatgcttttgatttatattctgaaatggttgcaaagagaatttctcctaatgttgtcacttatagtgctttaattagtggattttgc |
29928813 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||| ||| ||| || |||||||||| | | ||||||||| ||| || |||| ||||||| |||| |||||||||| | |
|
|
| T |
29928814 |
attgttggtaaattgaaagatgcatttgatttttttaataaaatgatattgtaaaacatcattccgtatttgtatacctttagtatattggttgatggat |
29928913 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
29928914 |
tttgtaaggaaggaagggtgaaag |
29928937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29902697 - 29902920
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatattt-gaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
|||| |||| || |||||||||||||||||||| ||||||||| ||| ||||| | ||| ||||| ||||||| | ||||||||||||||| ||| | |
|
|
| T |
29902697 |
taaatttgttaatgatgcttttgatttatattttgaaatggtttctaggagaacttctcctaatgttgtcacttatagtgctttaattagtggattttgc |
29902796 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| |||| ||| |||||||||| ||| || |||||||||| | |||||||||||||| ||||||| || |||| |||| |||||||||||| |
|
|
| T |
29902797 |
attgttggtaaactgagagatgcaattgatttctttaataaaatgatattcgaaaacatcaacccaaatgtgtatacttttactatattggttgatggtt |
29902896 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || |||||||||| |
|
|
| T |
29902897 |
tttgtaaggaaggaagggtgaaag |
29902920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29084459 - 29084668
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||| ||||| ||||| || ||||| | ||||||| ||||||||||||||| ||| | |
|
|
| T |
29084459 |
taaacatgttaatgatgcttttgatttatattctgaaatggtttctaagggaatttctcccaatgttgttacttacagtgctttaattagtgggtttttc |
29084558 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
|||| |||| |||| |||||||||| | |||| |||||||| | | |||||||||||| ||||||| ||| || ||||||||| |||||||||| | |
|
|
| T |
29084559 |
gttgttggtaaactgaaagatgcaattgatctgtttaataaaataatattggaaaacatcaaaccggatgggtatacttttaatatattggttgatggat |
29084658 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29084659 |
tttgtaagga |
29084668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29098784 - 29098993
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || ||||||||||||| || |||||||||| ||||| | ||| || |||||| | ||||||| ||||||||||||||||||| | |
|
|
| T |
29098784 |
taaacttgttaatgaagcttttgatttattttctgaaatggtttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgc |
29098883 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| | || |||| |||| |||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| || ||||||||| ||||| ||| | |
|
|
| T |
29098884 |
attcttggtaaactgaaagatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacttttaatatattggttaatgcat |
29098983 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29098984 |
tttgtaagga |
29098993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29115702 - 29115911
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || ||||||||||||| || ||||||| || ||||| | ||| || |||||| | ||||||| ||||||||||||||||||| | |
|
|
| T |
29115702 |
taaacttgttaatgaagcttttgatttattttctgaaatgatttctaaggggatttctcccgatgttgttacttacagtgctttaattagtggtttttgc |
29115801 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| | || |||| ||||||||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| || ||||||||| ||||| ||| | |
|
|
| T |
29115802 |
attcttggtaaactgaatgatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacttttaatatattggttaatgcat |
29115901 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29115902 |
tttgtaagga |
29115911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 28927540 - 28927344
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || || |||||||||||||||| |||||||||| ||||| | ||| || || ||| | ||||||| ||||||||||||||||||| | |
|
|
| T |
28927540 |
taaacttgttaatgaagcttttgatttatattctgaaatggtttctaaggggatttctcccgaagttgttacttacagtgctttaattagtggtttttgc |
28927441 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatg |
196 |
Q |
| |
|
| | || ||||||||||||| ||||||||||||| ||||||||| | | ||||| |||||||| || |||| |||||||||||| || |||||| |
|
|
| T |
28927440 |
attcttggtaaattgaatgattcaattggtttgtttcataaaatgatatcagaaaagatcaacccaaatatgtatacctttaatatattgattgatg |
28927344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 29366963 - 29366770
Alignment:
| Q |
17 |
gcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttcccactgtttctaaattga |
115 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||| | ||| || |||||| | ||||||||||||||||||||||| ||| || ||| |||| ||| |
|
|
| T |
29366963 |
gcttttgatttatattctgaaatggtttctaaggggatttctcccgatgttgttacttacaatgctttaattagtggcttttgcattgtcggtaaaatga |
29366864 |
T |
|
| Q |
116 |
atgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaagga |
209 |
Q |
| |
|
| ||||||| || |||||| |||||||||| | |||||||||||||| ||||||| || ||||| ||| |||||||||| ||||| ||||| |
|
|
| T |
29366863 |
aagatgcaactgatttgtttaataaaatgatattcgaaaacatcaacccaaatgtgtatacttttaacatattggttgatggattttgtaagga |
29366770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 29358429 - 29358314
Alignment:
| Q |
108 |
taaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaag |
207 |
Q |
| |
|
|||| |||| |||||| ||| | |||| |||||||||| | |||||||||||||||||||||||| ||||||| |||| | |||||||| ||||| ||| |
|
|
| T |
29358429 |
taaactgaaagatgcagttgatctgtttaataaaatgatattggaaaacatcaacccggatgtgtatacctttactatattagttgatggattttgtaag |
29358330 |
T |
|
| Q |
208 |
gatggtagggtgaaag |
223 |
Q |
| |
|
|| || |||||||||| |
|
|
| T |
29358329 |
gaaggaagggtgaaag |
29358314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 25450349 - 25450572
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| ||||||| |||||||||| ||| ||| ||||| ||||||||||| || || || ||| || | |
|
|
| T |
25450349 |
taaacttgttaacgttgcttttgatttatattatgaaatgcttgctaagaggatttctcctaatgttatcacttacaatactctacttcatggcctttgc |
25450448 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| ||| ||||||| ||||||||| ||||||| || | |||| | |||||||||||||||| |||||| ||||| |||||| |||||||||| | |
|
|
| T |
25450449 |
atcgttggacaattgaaagatgcaattagtttgtttaagataatggtatcggaaaacatcaacccaactgtgtataccttcaatatattggttgatggat |
25450548 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaag |
223 |
Q |
| |
|
|||| ||||| || | |||||||| |
|
|
| T |
25450549 |
tttgtaaggaaggaaaggtgaaag |
25450572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 29889069 - 29889184
Alignment:
| Q |
108 |
taaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaag |
207 |
Q |
| |
|
|||| |||| |||||||||| || || |||||||||| | |||||||||||| ||| ||||||| |||||||| ||| |||||||||| ||||| ||| |
|
|
| T |
29889069 |
taaaatgaaagatgcaattgattgttttaataaaatgatattggaaaacatcaatccgaatgtgtatacctttaacataatggttgatggattttgtaag |
29889168 |
T |
|
| Q |
208 |
gatggtagggtgaaag |
223 |
Q |
| |
|
|| || |||||||||| |
|
|
| T |
29889169 |
gaaggaagggtgaaag |
29889184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 24730300 - 24730369
Alignment:
| Q |
5 |
cttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcactt |
73 |
Q |
| |
|
||||| || ||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
24730300 |
cttgttaatgatgcttttgatttatattctcaaatggttgctaagagaatttctcctgatgatttcactt |
24730369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 30154066 - 30154150
Alignment:
| Q |
125 |
ttggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaagga |
209 |
Q |
| |
|
|||||||||||||| |||||| | |||||| |||||| ||||||| ||||| |||||| ||||||||||||| || ||||| |
|
|
| T |
30154066 |
ttggtttgttcaatgaaatgatactcaaaaacaccaaccccaatgtgtataccttcaatatattggttgatggtttatgtaagga |
30154150 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21784 - 21993
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| ||||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
21784 |
taaacatgttaatgatgcttttgatttatattctgaaaaggtttctaagagaattttccccgatgttttcacttacaatgctttaattagtggcttttgc |
21883 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| ||||||||| |||||||||| ||| ||||||||||||||| || ||||||||| ||| |||||||| ||||||| |||| |||||||||| | |
|
|
| T |
21884 |
attgttggtaaattgaaagatgcaattgatttattcaataaaatgacatcgaaaaacatcatcccagatgtgtatacctttagtatattggttgatggat |
21983 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
21984 |
tttgtaagga |
21993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 54259 - 54037
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||| ||| || ||||||||||||||||||| |||||||||||| ||||||||| || |||||| | ||||||| |||||||||||| || ||| | |
|
|
| T |
54259 |
taaacatgttaatgatgcttttgatttatattctgaaatggttgcaaagagaatttctcccgatgttgttacttacagtgctttaattagagggtttttc |
54160 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| |||| |||| |||| |||||||||| | |||| |||||||||| | |||||||||||| ||||||||||| |||||||||||| | |||||||| | |
|
|
| T |
54159 |
attgttggtaaactgaaagatgcaattgatctgtttaataaaatgatattggaaaacatcaaaccggatgtgtatacctttaatatattagttgatggat |
54060 |
T |
|
| Q |
200 |
tttgcaaggatggtagggtgaaa |
222 |
Q |
| |
|
|||| ||||| || ||| ||||| |
|
|
| T |
54059 |
tttgtaaggaaggaaggctgaaa |
54037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 24219793 - 24219584
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| | ||| |||| ||||||| ||| |||||||| ||||||| | |
|
|
| T |
24219793 |
taaacttgttaacgatgcttttgatttctattctgaaatggttgctaagagaatttgtcctactgttgtcacttataatactttaatttgtggtttatgc |
24219694 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
| | | | ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||| ||||||| |||| ||||||||| | |
|
|
| T |
24219693 |
attatgggtcaattgaaagatgcaattggtttgttacataaaatgatattggaaaacatcaacccaactgtgtatacctttagtatattggttgatgcat |
24219594 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
24219593 |
tttgtaagga |
24219584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15063434 - 15063225
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||||||||| |||| |||||| |||||||| ||||||| | | ||||||||||||| ||| | |
|
|
| T |
15063434 |
taaacttgttaacgatgcttttgatttatattgtgaaatggtttctaaaagaatttctcctgatgtagtcacttatagttctttaattagtggcttttgc |
15063335 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
|||| ||||||||| |||| ||| |||||| |||| ||||| | |||| ||||| || ||| ||||||| || |||| |||| || ||||||||| |
|
|
| T |
15063334 |
gttgttggtaaattgaaatatgctgttgatttgtttaatagaatgatatcggacaacattaatccgaatgtgtatacttttagtatattgattgatggtt |
15063235 |
T |
|
| Q |
200 |
tttgcaagga |
209 |
Q |
| |
|
|||| ||||| |
|
|
| T |
15063234 |
tttgtaagga |
15063225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 10129578 - 10129790
Alignment:
| Q |
1 |
taaacttgtcaacgatgcttttgatttatatt-tgaaatggttgctaagagaattggccctgatgttttcacttacaatgctttaattagtggttttccc |
99 |
Q |
| |
|
||||||||| || ||||||||| ||||||||| ||||||| | |||||||||||| ||||||||| ||||||| ||| |||||||||||| ||| | |
|
|
| T |
10129578 |
taaacttgttaatgatgcttttaatttatattctgaaatgatcgctaagagaatttttcctgatgttgtcacttataataatttaattagtggcttttgc |
10129677 |
T |
|
| Q |
100 |
actgtttctaaattgaatgatgcaattggtttgttcaataaaatgacagcggaaaacatcaacccggatgtgtacacctttaatatactggttgatggtt |
199 |
Q |
| |
|
||| | ||||||| ||||||||||||||||| ||||||||| | ||||||||| ||||| |||| || ||| | | |||| ||||||||| || |
|
|
| T |
10129678 |
gttgtgggtcaattgaaagatgcaattggtttgttgcataaaatgatattggaaaacattaacccaaatgtttataccatgagtatattggttgatgctt |
10129777 |
T |
|
| Q |
200 |
tttgcaaggatgg |
212 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
10129778 |
tttgtaaggatgg |
10129790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 1626 - 1569
Alignment:
| Q |
152 |
aaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaagga |
209 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||| |||| |||| |||||| ||||| |
|
|
| T |
1626 |
aaaacatcaaccctgatgtgtatacttttaatatattggtcgatgctttttgtaagga |
1569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 105144 - 105087
Alignment:
| Q |
152 |
aaaacatcaacccggatgtgtacacctttaatatactggttgatggtttttgcaagga |
209 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||| ||||||||| | |||| ||||| |
|
|
| T |
105144 |
aaaacatcaacccagatgtgtatacttttaatatattggttgatgctctttgtaagga |
105087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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