View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0686_low_32 (Length: 281)
Name: NF0686_low_32
Description: NF0686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0686_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 13768914 - 13768675
Alignment:
| Q |
12 |
taatatcatcctcaagttcttctatcattaactttttctcttcaaattcaataatagctagagcctcagcttctgttatcttatcacaaacttcttgaac |
111 |
Q |
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| T |
13768914 |
taatatcatcctcaagttcttctatcattaactttttctcttcaaattcaataatagctagagcctcagcttctgttatcttatcacaaacttcttgaac |
13768815 |
T |
|
| Q |
112 |
ctgaataatttcagcatgcttctccgttagttgtgaattaaagggtatcaatgagctaatgaactcttttttcaatgaagtaacatacttcatgagttca |
211 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13768814 |
ctgaataatttcagcatgcttctccattagttgtgaattaaagggtatcaatgagctaatgaactcttttttcaatgaagtaacatacttcatgagttca |
13768715 |
T |
|
| Q |
212 |
ttttttgccatattttttccctttataggaatctctttct |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
13768714 |
ttttttgccatattttttccctttataggaatctctttct |
13768675 |
T |
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