View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0687_low_21 (Length: 279)

Name: NF0687_low_21
Description: NF0687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0687_low_21
NF0687_low_21
[»] scaffold0001 (1 HSPs)
scaffold0001 (42-279)||(143734-143971)
[»] chr7 (45 HSPs)
chr7 (182-259)||(33819115-33819192)
chr7 (133-259)||(21350717-21350851)
chr7 (69-121)||(33819283-33819335)
chr7 (133-179)||(759183-759229)
chr7 (133-179)||(36790731-36790777)
chr7 (69-121)||(7463282-7463334)
chr7 (133-179)||(21390286-21390332)
chr7 (69-111)||(26974108-26974150)
chr7 (69-111)||(32346060-32346102)
chr7 (133-179)||(32346144-32346190)
chr7 (133-179)||(34947491-34947537)
chr7 (133-178)||(3178296-3178341)
chr7 (133-259)||(11373520-11373653)
chr7 (69-122)||(12631373-12631426)
chr7 (135-176)||(25571413-25571454)
chr7 (134-179)||(48608857-48608902)
chr7 (69-113)||(2459546-2459590)
chr7 (69-113)||(5524457-5524501)
chr7 (133-177)||(6495026-6495070)
chr7 (69-121)||(11373436-11373488)
chr7 (69-121)||(28103802-28103854)
chr7 (69-121)||(29835422-29835474)
chr7 (69-121)||(34100555-34100607)
chr7 (69-121)||(41506073-41506125)
chr7 (69-113)||(44180282-44180326)
chr7 (133-175)||(9785983-9786025)
chr7 (133-179)||(19271825-19271871)
chr7 (133-179)||(28202401-28202447)
chr7 (69-111)||(34947579-34947621)
chr7 (137-259)||(37245595-37245723)
chr7 (133-179)||(46478385-46478431)
chr7 (133-174)||(2459467-2459508)
chr7 (76-121)||(7457436-7457481)
chr7 (182-255)||(8592589-8592662)
chr7 (80-121)||(21350644-21350685)
chr7 (76-113)||(24516304-24516341)
chr7 (133-174)||(34100639-34100680)
chr7 (133-174)||(41506157-41506198)
chr7 (69-113)||(83462-83506)
chr7 (182-270)||(5524273-5524360)
chr7 (69-113)||(8592448-8592492)
chr7 (69-121)||(9786057-9786109)
chr7 (135-179)||(22738692-22738736)
chr7 (69-113)||(22738778-22738822)
chr7 (135-179)||(40076309-40076353)
[»] chr8 (31 HSPs)
chr8 (69-121)||(21216103-21216155)
chr8 (133-259)||(44761580-44761711)
chr8 (69-113)||(1739710-1739754)
chr8 (69-121)||(1875594-1875646)
chr8 (69-111)||(7703158-7703200)
chr8 (133-177)||(22771921-22771965)
chr8 (73-121)||(44761500-44761548)
chr8 (191-259)||(45425819-45425886)
chr8 (69-123)||(2767293-2767347)
chr8 (133-179)||(17719344-17719390)
chr8 (133-257)||(10953821-10953949)
chr8 (133-257)||(10961826-10961954)
chr8 (196-264)||(14855093-14855159)
chr8 (69-121)||(7172976-7173028)
chr8 (133-185)||(17823899-17823951)
chr8 (133-176)||(32678390-32678433)
chr8 (133-179)||(7172898-7172944)
chr8 (133-179)||(13335200-13335246)
chr8 (133-175)||(31082607-31082649)
chr8 (182-259)||(21216243-21216319)
chr8 (133-174)||(39405751-39405792)
chr8 (69-113)||(396613-396657)
chr8 (133-177)||(396697-396741)
chr8 (69-121)||(11976938-11976990)
chr8 (142-178)||(26626207-26626243)
chr8 (133-177)||(29226614-29226658)
chr8 (133-177)||(32476273-32476317)
chr8 (69-113)||(34393956-34394000)
chr8 (69-113)||(34948689-34948733)
chr8 (69-113)||(39405832-39405876)
chr8 (69-113)||(39482685-39482729)
[»] chr3 (34 HSPs)
chr3 (191-259)||(24569247-24569315)
chr3 (69-121)||(8679055-8679107)
chr3 (69-121)||(37312012-37312064)
chr3 (69-121)||(43253864-43253916)
chr3 (133-178)||(10366734-10366779)
chr3 (182-259)||(27471232-27471308)
chr3 (182-259)||(43254006-43254082)
chr3 (133-179)||(5323022-5323068)
chr3 (69-123)||(10366643-10366697)
chr3 (134-176)||(17652739-17652781)
chr3 (69-111)||(37695667-37695709)
chr3 (133-179)||(37695751-37695797)
chr3 (142-179)||(3901243-3901280)
chr3 (72-113)||(30190664-30190705)
chr3 (133-177)||(1778629-1778673)
chr3 (69-113)||(23004383-23004427)
chr3 (69-121)||(27471397-27471449)
chr3 (133-177)||(39043842-39043886)
chr3 (133-176)||(36476571-36476614)
chr3 (70-113)||(38795414-38795457)
chr3 (69-111)||(1778714-1778756)
chr3 (133-179)||(12904848-12904894)
chr3 (135-177)||(19822997-19823039)
chr3 (69-111)||(24569101-24569143)
chr3 (133-179)||(29024050-29024096)
chr3 (133-179)||(30190745-30190791)
chr3 (133-179)||(36460501-36460547)
chr3 (182-264)||(37773108-37773189)
chr3 (133-179)||(44301546-44301592)
chr3 (182-259)||(51065155-51065235)
chr3 (142-179)||(8679148-8679185)
chr3 (69-110)||(33491084-33491125)
chr3 (133-177)||(37497478-37497522)
chr3 (135-179)||(37773051-37773095)
[»] chr4 (56 HSPs)
chr4 (154-259)||(44526278-44526384)
chr4 (69-121)||(6643667-6643719)
chr4 (69-121)||(47464372-47464424)
chr4 (133-179)||(21240795-21240841)
chr4 (133-179)||(33790822-33790868)
chr4 (133-179)||(49746945-49746991)
chr4 (69-113)||(7061671-7061715)
chr4 (70-113)||(48914151-48914194)
chr4 (133-179)||(17237387-17237433)
chr4 (69-123)||(38502489-38502543)
chr4 (133-179)||(47464456-47464502)
chr4 (133-179)||(49428433-49428479)
chr4 (133-255)||(22129943-22130073)
chr4 (134-179)||(38405194-38405239)
chr4 (135-179)||(6643753-6643797)
chr4 (69-113)||(17237303-17237347)
chr4 (69-121)||(32884863-32884915)
chr4 (69-121)||(34360717-34360769)
chr4 (69-121)||(35311230-35311282)
chr4 (73-113)||(36985856-36985896)
chr4 (69-113)||(43237313-43237357)
chr4 (69-121)||(46396890-46396942)
chr4 (69-113)||(47773026-47773070)
chr4 (69-113)||(51625153-51625197)
chr4 (135-178)||(28500976-28501019)
chr4 (69-112)||(44536203-44536246)
chr4 (133-179)||(2653404-2653450)
chr4 (137-179)||(3689546-3689588)
chr4 (133-179)||(6609745-6609791)
chr4 (182-264)||(26147766-26147847)
chr4 (69-111)||(28500898-28500940)
chr4 (182-259)||(35311373-35311448)
chr4 (137-179)||(35380428-35380470)
chr4 (69-111)||(42517645-42517687)
chr4 (133-179)||(47773110-47773156)
chr4 (69-111)||(49428349-49428391)
chr4 (133-179)||(51624770-51624816)
chr4 (69-111)||(52869144-52869186)
chr4 (142-179)||(5841528-5841565)
chr4 (133-174)||(43237232-43237273)
chr4 (134-179)||(46396963-46397008)
chr4 (133-174)||(49176025-49176066)
chr4 (76-113)||(49747031-49747068)
chr4 (142-179)||(50264180-50264217)
chr4 (69-121)||(2942652-2942704)
chr4 (134-174)||(4972561-4972601)
chr4 (69-113)||(6609831-6609875)
chr4 (69-113)||(11907606-11907650)
chr4 (182-258)||(16821480-16821555)
chr4 (69-113)||(17114510-17114554)
chr4 (69-113)||(21325171-21325215)
chr4 (135-179)||(28911249-28911293)
chr4 (69-121)||(35380340-35380392)
chr4 (69-121)||(40122861-40122913)
chr4 (191-259)||(47464523-47464591)
chr4 (69-113)||(52859806-52859850)
[»] chr5 (36 HSPs)
chr5 (76-121)||(41496142-41496187)
chr5 (69-121)||(4818613-4818665)
chr5 (69-121)||(8698371-8698423)
chr5 (137-259)||(40530311-40530441)
chr5 (133-179)||(6315860-6315906)
chr5 (133-179)||(6753741-6753787)
chr5 (69-123)||(7827925-7827979)
chr5 (76-121)||(6615886-6615931)
chr5 (135-179)||(19929930-19929974)
chr5 (69-121)||(40530223-40530275)
chr5 (69-123)||(2232072-2232126)
chr5 (133-179)||(40899902-40899948)
chr5 (133-174)||(2232152-2232193)
chr5 (69-118)||(15818479-15818528)
chr5 (133-259)||(27580503-27580630)
chr5 (133-177)||(7828009-7828053)
chr5 (68-111)||(27580672-27580715)
chr5 (182-259)||(41495979-41496053)
chr5 (69-111)||(1248603-1248645)
chr5 (182-264)||(4818442-4818523)
chr5 (133-171)||(6754021-6754059)
chr5 (137-179)||(8698293-8698335)
chr5 (69-111)||(8725008-8725050)
chr5 (133-179)||(21060614-21060660)
chr5 (133-179)||(27542779-27542825)
chr5 (69-111)||(27542867-27542909)
chr5 (69-111)||(30512684-30512726)
chr5 (69-111)||(30553024-30553066)
chr5 (133-179)||(31655037-31655083)
chr5 (69-111)||(31655125-31655167)
chr5 (182-259)||(2232212-2232288)
chr5 (133-174)||(22848467-22848508)
chr5 (69-113)||(2588067-2588111)
chr5 (81-113)||(9515816-9515848)
chr5 (135-179)||(30512771-30512815)
chr5 (135-179)||(30553111-30553155)
[»] chr1 (35 HSPs)
chr1 (69-121)||(23168997-23169049)
chr1 (69-121)||(28749053-28749105)
chr1 (69-121)||(39864173-39864225)
chr1 (147-270)||(33733364-33733497)
chr1 (182-264)||(12038974-12039055)
chr1 (69-113)||(12039152-12039196)
chr1 (69-113)||(31042867-31042911)
chr1 (133-179)||(25089174-25089220)
chr1 (133-179)||(35682882-35682928)
chr1 (133-179)||(39864095-39864141)
chr1 (133-178)||(38787326-38787371)
chr1 (135-179)||(7759199-7759243)
chr1 (70-113)||(36701991-36702034)
chr1 (70-113)||(36718095-36718138)
chr1 (131-174)||(37177825-37177868)
chr1 (133-179)||(6785240-6785286)
chr1 (133-179)||(14757682-14757728)
chr1 (69-111)||(24991657-24991699)
chr1 (182-264)||(24991799-24991880)
chr1 (69-111)||(26093466-26093508)
chr1 (133-179)||(32826082-32826128)
chr1 (143-177)||(37276447-37276481)
chr1 (133-179)||(37506108-37506154)
chr1 (135-220)||(6160549-6160633)
chr1 (133-174)||(9307616-9307657)
chr1 (133-178)||(20209928-20209973)
chr1 (133-174)||(35367791-35367832)
chr1 (133-178)||(40144935-40144980)
chr1 (135-179)||(917008-917052)
chr1 (191-259)||(6023804-6023871)
chr1 (69-121)||(9307689-9307741)
chr1 (69-113)||(21910010-21910054)
chr1 (69-121)||(43500788-43500840)
chr1 (133-177)||(49224074-49224118)
chr1 (133-177)||(52429330-52429374)
[»] scaffold0294 (1 HSPs)
scaffold0294 (69-123)||(17095-17149)
[»] chr2 (37 HSPs)
chr2 (69-123)||(35313947-35314001)
chr2 (133-177)||(7494921-7494965)
chr2 (133-177)||(8947135-8947179)
chr2 (182-259)||(8928504-8928582)
chr2 (133-179)||(9458349-9458395)
chr2 (133-179)||(17695314-17695360)
chr2 (69-111)||(19937749-19937791)
chr2 (133-179)||(25637465-25637511)
chr2 (133-179)||(36354526-36354572)
chr2 (133-179)||(37322412-37322458)
chr2 (69-111)||(43410498-43410540)
chr2 (69-113)||(8947051-8947095)
chr2 (76-123)||(3323292-3323339)
chr2 (143-178)||(5272232-5272267)
chr2 (196-259)||(26863515-26863578)
chr2 (196-259)||(35313784-35313846)
chr2 (133-179)||(39691474-39691520)
chr2 (69-111)||(45235653-45235695)
chr2 (182-259)||(3323412-3323488)
chr2 (133-174)||(7438935-7438976)
chr2 (69-110)||(17695403-17695444)
chr2 (69-110)||(26607967-26608008)
chr2 (76-121)||(28170589-28170634)
chr2 (133-178)||(39785570-39785615)
chr2 (69-121)||(5789647-5789699)
chr2 (135-179)||(5789733-5789777)
chr2 (69-113)||(9458270-9458314)
chr2 (133-177)||(15359170-15359214)
chr2 (69-113)||(16463759-16463803)
chr2 (70-102)||(18853200-18853232)
chr2 (69-113)||(27501537-27501581)
chr2 (135-179)||(34120522-34120566)
chr2 (133-177)||(34225576-34225620)
chr2 (133-177)||(36794270-36794314)
chr2 (69-113)||(36794354-36794398)
chr2 (69-113)||(39785658-39785702)
chr2 (69-121)||(43115801-43115853)
[»] chr6 (19 HSPs)
chr6 (69-121)||(31894210-31894262)
chr6 (136-259)||(31283488-31283612)
chr6 (133-174)||(181545-181586)
chr6 (133-178)||(11656030-11656075)
chr6 (133-174)||(31894294-31894335)
chr6 (69-113)||(13909494-13909538)
chr6 (69-121)||(23142729-23142781)
chr6 (135-179)||(29363290-29363334)
chr6 (70-121)||(1781864-1781915)
chr6 (70-113)||(7072230-7072273)
chr6 (133-176)||(33510127-33510170)
chr6 (133-179)||(21010157-21010203)
chr6 (71-113)||(34639454-34639496)
chr6 (182-259)||(3720382-3720458)
chr6 (133-174)||(15046113-15046153)
chr6 (133-174)||(15058106-15058147)
chr6 (133-177)||(11143671-11143715)
chr6 (133-173)||(21425641-21425681)
chr6 (182-229)||(21478236-21478284)
[»] scaffold0110 (1 HSPs)
scaffold0110 (133-179)||(1688-1734)
[»] scaffold1809 (2 HSPs)
scaffold1809 (79-121)||(695-737)
scaffold1809 (143-179)||(779-815)
[»] scaffold0182 (1 HSPs)
scaffold0182 (133-175)||(20438-20480)
[»] scaffold0095 (2 HSPs)
scaffold0095 (133-174)||(50193-50234)
scaffold0095 (69-113)||(50274-50318)
[»] scaffold0018 (1 HSPs)
scaffold0018 (133-174)||(136122-136163)
[»] scaffold0016 (1 HSPs)
scaffold0016 (133-174)||(76281-76322)
[»] scaffold0012 (1 HSPs)
scaffold0012 (133-178)||(105669-105714)
[»] scaffold0583 (1 HSPs)
scaffold0583 (146-178)||(2010-2042)
[»] scaffold0302 (1 HSPs)
scaffold0302 (69-121)||(16160-16212)
[»] scaffold0159 (2 HSPs)
scaffold0159 (69-121)||(34020-34072)
scaffold0159 (135-179)||(34106-34150)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-177)||(252889-252933)


Alignment Details
Target: scaffold0001 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 42 - 279
Target Start/End: Complemental strand, 143971 - 143734
Alignment:
Q  42 aatattaatagtttaaggttttactcaattaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttattgtgttgaatagtagttat 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  143971 aatattaatagtttaaggttttactcaattaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttattgtgttgaatagtagttat 143872  T
Q  142 gttggatgaaattaaataaataagggtataataatggatgaaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaa 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  143871 gttggatgaaattaaataaataagggtataataatggatgaaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaa 143772  T
Q  242 gagacaataattgtgagaaggataaagtacgcattttt 279  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  143771 gagacaataattgtgagaaggataaagtacgtattttt 143734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 33819192 - 33819115
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||| |||||||||||||  ||||||||||||||||||| |||  ||||| |||||||||||||||||||||||    
T  33819192 aaatgctgcattggtattgtaaagtgacaattattttgaaaaaaaaagaaaaatgttaaagagacaataattgtgaga 33819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 21350717 - 21350851
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatgaaa---------tgctgtattggtattgtaatctgacaattattttgaaaa 223  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||  |||         ||||| |||||||||||||  ||||||||||||||| ||    
T  21350717 agtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggtattgtaaagtgacaattattttgagaa 21350816  T
Q  224 ataaaataaaatattaaagagacaataattgtgaga 259  Q
    | || | ||||| ||||| |||||||||||||||||    
T  21350817 a-aagaaaaaatgttaaaaagacaataattgtgaga 21350851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 33819335 - 33819283
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  33819335 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 33819283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 759183 - 759229
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  759183 agtagttaagttggatgaaattcaataaataagggtataataatgga 759229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 36790777 - 36790731
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  36790777 agtagttatgtcggatgaaattcaataaataagggtataataatgga 36790731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 7463334 - 7463282
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  7463334 attaaggaaatgattaattgtgttgatttcaatgataaaattagtagcattta 7463282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 21390332 - 21390286
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  21390332 agtagttaagttagatgaaattcaataaataagggtataataatgga 21390286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 26974150 - 26974108
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  26974150 attaaggaaatgattaattgtgttgatttcaatggtaaaatta 26974108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 32346060 - 32346102
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  32346060 attaaggaaataattgattgtgttgatttcaatggtaaaatta 32346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 32346144 - 32346190
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||    
T  32346144 agtagttaagttgaatgaaattcaataaataagggtataataatgga 32346190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 34947537 - 34947491
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  34947537 agtagttaagttggatgaaattcaataaatgagggtataataatgga 34947491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 3178296 - 3178341
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  3178296 agtagttaagttggatgaaattcaataaataagggtatattaatgg 3178341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 11373520 - 11373653
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg--------atgaaatgctgtattggtattgtaatctgacaattattttgaaaaa 224  Q
    |||||||| ||||||||||||| |||||||||| |||||||| |||        |  |||||||| |||| ||||||||  | ||||||||||||| |||    
T  11373520 agtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaataataaatgctgcattgatattgtaaagtaacaattattttgagaaa 11373619  T
Q  225 taaaataaaatattaaagagacaataattgtgaga 259  Q
     || | |||||  ||||||||||||||||||||||    
T  11373620 -aagaaaaaatggtaaagagacaataattgtgaga 11373653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 12631426 - 12631373
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttat 122  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||    
T  12631426 attaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttat 12631373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 25571454 - 25571413
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataat 176  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  25571454 tagttaagttggatgaaattcaataaataagggtataataat 25571413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 48608902 - 48608857
Alignment:
Q  134 gtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  48608902 gtagttaagttggatgaaattcaataaataagagtataataatgga 48608857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 2459590 - 2459546
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  2459590 attaaggaaatgattaattgtgttgatttcaacggtaaaattagt 2459546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 5524501 - 5524457
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  5524501 attaagaaaatgattaattgtgttgatttcaatggtaaaattagt 5524457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 6495026 - 6495070
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||    
T  6495026 agtagtaaagttggatgaaatttaataaataagggtataataatg 6495070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 11373436 - 11373488
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||||||||  |||||||||||||| || |||||||||||||| |||||||    
T  11373436 attaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcattta 11373488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 28103854 - 28103802
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||  |||||||    
T  28103854 attaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcattta 28103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 29835422 - 29835474
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||| ||||||| | ||||||||||||||| |||||||    
T  29835422 attaaggaaatgattaattatgttgatttaaatggtaaaattagtagcattta 29835474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 34100555 - 34100607
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||| ||||||||||| |||||||    
T  34100555 attaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcattta 34100607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 41506073 - 41506125
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| |||||||||||| || | ||||||||||||||| |||||||    
T  41506073 attaaggaaatgattaattgtgttaattttaatggtaaaattagtagcattta 41506125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 44180326 - 44180282
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  44180326 attaagaaaatgattaattgtgttgatttcaatggtaaaattagt 44180282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 9786025 - 9785983
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataa 175  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||    
T  9786025 agtagttaagttggataaaattcaataaataagggtataataa 9785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 19271825 - 19271871
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||| | ||||||||||||||||||| ||||    
T  19271825 agtagttaagttggatgaaaattaataaataagggtataatattgga 19271871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 28202401 - 28202447
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| | ||||||||||||| |||||||||| |||||||||||||    
T  28202401 agtagtaaagttggatgaaattcaataaataagagtataataatgga 28202447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 34947621 - 34947579
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||    
T  34947621 attaaagaaatgattaattgtgttgatttcaatggtaaaatta 34947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 37245723 - 37245595
Alignment:
Q  137 gttatgttggatgaaattaaataaataagggtataataatg--------gatgaaatgctgtattggtattgtaatctgacaattattttgaaaaataaa 228  Q
    |||| ||||||||||||| ||||||||||||||||||| ||         |  ||||| || |||||||||||||  ||||||||||||||| ||  |||    
T  37245723 gttaagttggatgaaattcaataaataagggtataatagtgagaaaaaataataaatgttgcattggtattgtaaagtgacaattattttgagaa--aaa 37245626  T
Q  229 ataaaatattaaagagacaataattgtgaga 259  Q
    | ||| |  ||||||||||||||||||||||    
T  37245625 aaaaattgctaaagagacaataattgtgaga 37245595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 46478385 - 46478431
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| |||||||||| |||||||| ||||    
T  46478385 agtagttaagttggatgaaattcaataaataagagtataatagtgga 46478431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 2459508 - 2459467
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  2459508 agtagttaagtaggatgaaattcaataaataagggtataata 2459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 7457436 - 7457481
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||| ||||||| ||||||| |||||||||||||||||| ||||||    
T  7457436 aaatgattaattatgttgatttcaatggtaaaattagttacattta 7457481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 8592589 - 8592662
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgt 255  Q
    |||||||| |||| ||||||||  ||| ||||||||||| ||| | || |||||  ||||||||||||||||||    
T  8592589 aaatgctgcattgatattgtaaaatgaaaattattttgagaaaaagaaaaaaatgctaaagagacaataattgt 8592662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 21350644 - 21350685
Alignment:
Q  80 aattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||||||||||||| |||||||||||| |||||| |||||    
T  21350644 aattaattgtgttgatttcaatggtaaaaatagttgtattta 21350685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 24516304 - 24516341
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  24516304 aaatgattaattgtgttgatttcaatggtaaaattagt 24516341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 34100639 - 34100680
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||| ||| |||||||||||||||||||    
T  34100639 agtagttaagttggatgacattcaataaataagggtataata 34100680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 41506157 - 41506198
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||| ||||||||    
T  41506157 agtagttaagttggatgaaattcaataaataagagtataata 41506198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 83506 - 83462
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  83506 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 83462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 5524360 - 5524273
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggataaagta 270  Q
    |||||||| |||| ||||||||  ||| ||||||||||| ||| | || |||||  |||||||||||||||| ||||| |||| |||||    
T  5524360 aaatgctgcattgatattgtaaagtgagaattattttgagaaaaagaa-aaaatgctaaagagacaataattatgagatggatgaagta 5524273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 8592448 - 8592492
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||| ||||| ||||||||||||||| |||||||| ||||||||    
T  8592448 attaaagaaatgattaattgtgttgatttcaatggttaaattagt 8592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 9786109 - 9786057
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| |  |||||||||||| || ||||||    
T  9786109 attaaggaaatgattaattgtgttgattttgatggtaaaattaatttcattta 9786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 22738736 - 22738692
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  22738736 tagttaagttggatgaaatttaataaataaaggtataatagtgga 22738692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 22738822 - 22738778
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||| ||||| ||||||||||| ||| |||||||||||||||||    
T  22738822 attaaagaaatgattaattgtgtagatttcaatggtaaaattagt 22738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 40076353 - 40076309
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||||||| | ||||||||    
T  40076353 tagttaagttggatgaaattcaataaataagggtgtgataatgga 40076309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 21216103 - 21216155
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  21216103 attaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcattta 21216155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 44761580 - 44761711
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatgaaa------tgctgtattggtattgtaatctgacaattattttgaaaaata 226  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| ||||  |||      ||||| |||||||||||||  ||||||||||||||| ||| |    
T  44761580 agtagttaagttggatgaaattcaataaatgagggtataatagtggaaaaaactaatatgctgcattggtattgtaaagtgacaattattttgagaaa-a 44761678  T
Q  227 aaataaaatattaaagagacaataattgtgaga 259  Q
    | | |||||  || |||||||||||||||||||    
T  44761679 agaaaaaatgctagagagacaataattgtgaga 44761711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 1739754 - 1739710
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  1739754 attaaggaaataattaattgtgttgatttcaatggtaaaattagt 1739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 1875594 - 1875646
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  1875594 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 1875646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 7703158 - 7703200
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  7703158 attaaggaaataattaattgtgttgatttcaatggtaaaatta 7703200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 22771921 - 22771965
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||    
T  22771921 agtaattatgttggatgaaattcaataaataagggtataataatg 22771965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 44761500 - 44761548
Alignment:
Q  73 aggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  44761500 aggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 44761548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 45425819 - 45425886
Alignment:
Q  191 attggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||| ||||||||  |||||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  45425819 attgatattgtaaagtgacaattattttgaaaaaataaa-aaaatatcaaagagacaataattgtgaga 45425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 2767293 - 2767347
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||  ||||||||    
T  2767293 attaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttatt 2767347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 17719344 - 17719390
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  17719344 agtagttaagttggatgaaatttaataaataaaggtataataatgga 17719390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 10953821 - 10953949
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatga-----aatgctgtattggtattgtaatctgacaattattttgaaaaataa 227  Q
    |||||||| ||| ||| ||||| |||| ||||||||||||||||| |  |     |||| || |||||||| ||||  ||||||||||||||| ||| |     
T  10953821 agtagttaagttagatcaaattcaatatataagggtataataatgaaaaataataaatgttgcattggtatcgtaaagtgacaattattttgagaaaaag 10953920  T
Q  228 aataaaatattaaagagacaataattgtga 257  Q
    || ||||| |||||||||||||||||||||    
T  10953921 aa-aaaatgttaaagagacaataattgtga 10953949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 10961826 - 10961954
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatga-----aatgctgtattggtattgtaatctgacaattattttgaaaaataa 227  Q
    |||||||| ||| ||| ||||| |||| ||||||||||||||||| |  |     |||| || |||||||| ||||  ||||||||||||||| ||| |     
T  10961826 agtagttaagttagatcaaattcaatatataagggtataataatgaaaaataataaatgttgcattggtatcgtaaagtgacaattattttgagaaaaag 10961925  T
Q  228 aataaaatattaaagagacaataattgtga 257  Q
    || ||||| |||||||||||||||||||||    
T  10961926 aa-aaaatgttaaagagacaataattgtga 10961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 14855093 - 14855159
Alignment:
Q  196 tattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    ||||||||  ||||||||||||| |||||  |||||||||| |||||||||||||||| ||||| ||||    
T  14855093 tattgtaaagtgacaattattttaaaaaa--aaataaaatactaaagagacaataattatgagacggat 14855159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 7173028 - 7172976
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| ||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  7173028 attaaagaaatgattaattgtgttgatttcaatgataaaattagtagcattta 7172976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 17823951 - 17823899
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatgaaat 185  Q
    |||||||| |||||||||||||||||||||||  |||||||| |||| |||||    
T  17823951 agtagttaagttggatgaaattaaataaataatagtataatagtggaggaaat 17823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 32678433 - 32678390
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataat 176  Q
    |||||||| ||||||||||||||||||||||||  |||||||||    
T  32678433 agtagttaagttggatgaaattaaataaataagaatataataat 32678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 7172944 - 7172898
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| |||| |||||||| ||||||||||||||||||| ||||    
T  7172944 agtagttaagttgaatgaaattcaataaataagggtataatagtgga 7172898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 13335246 - 13335200
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||| ||||||||||||||||    
T  13335246 agtagttaagtttgatgaaattcaataaatcagggtataataatgga 13335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 31082649 - 31082607
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataa 175  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||    
T  31082649 agtagttaagttggatgaaatttaataaataaaggtataataa 31082607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 21216243 - 21216319
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||| || |||||||||||||  ||||||||||||| | ||| | || |||||  ||||||||||||||||||||||    
T  21216243 aaatgttgcattggtattgtaaagtgacaattattttcagaaaaagaa-aaaatgctaaagagacaataattgtgaga 21216319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 39405792 - 39405751
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||| ||| |||| ||||||||||||||||||||||||||||    
T  39405792 agtaattaagttgaatgaaattaaataaataagggtataata 39405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 396613 - 396657
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||| ||||||| |||| ||||||||||||    
T  396613 attaaggaaatgattaattatgttgatttcaacggtaaaattagt 396657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 396697 - 396741
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    ||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  396697 agtagttatattggataaaattcaattaataagggtataataatg 396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 11976938 - 11976990
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||| |||||| ||||||||||||||| ||||||||| ||| ||| |||||||    
T  11976938 attatggaaatcattaattgtgttgatttcaatggtataatcagtagcattta 11976990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26626207 - 26626243
Alignment:
Q  142 gttggatgaaattaaataaataagggtataataatgg 178  Q
    |||| |||||||| |||||||||||||||||||||||    
T  26626207 gttgaatgaaattcaataaataagggtataataatgg 26626243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 29226614 - 29226658
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||| ||||||||| |||||||||||||| |||||||    
T  29226614 agtagttaagttagatgaaattcaataaataagggtacaataatg 29226658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 32476317 - 32476273
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  32476317 agtagttaagtttgatgaaattcaataaataagggtataacaatg 32476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 34393956 - 34394000
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  34393956 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 34394000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 34948689 - 34948733
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||    
T  34948689 attaaggaaatgattaattgtgttgatttaaatagtaaaattagt 34948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 39405876 - 39405832
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| |||||||||||| || |||||| ||||||||||    
T  39405876 attaaggaaatgattaattgtgttaatttcaatgataaaattagt 39405832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 39482729 - 39482685
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| |||| ||||||||||||||| |||| ||||||||||||    
T  39482729 attaagaaaatgattaattgtgttgatttcaagggtaaaattagt 39482685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 24569247 - 24569315
Alignment:
Q  191 attggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||||||||  ||||||||||||||||||| || | ||||||||||||||||||| |||||||||    
T  24569247 attggtattgtaaagtgacaattattttgaaaaaaaagaaaaaatattaaagagacaattattgtgaga 24569315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 8679055 - 8679107
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  8679055 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 8679107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 37312064 - 37312012
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  37312064 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 37312012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 43253864 - 43253916
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  43253864 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 43253916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 10366734 - 10366779
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  10366734 agtagttaagttggatgaaattcaataaataagggtataataatgg 10366779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 27471308 - 27471232
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||||||||||||| |||  ||||||||||||||| ||| || | |||||  ||||||||||||||||||||||    
T  27471308 aaatgctgtattggtattataaagtgacaattattttgagaaa-aagaaaaaatgctaaagagacaataattgtgaga 27471232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 43254006 - 43254082
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||| || |||||||||||||  ||||||||||||||| ||||| || |||||  ||||||||||||||||||||||    
T  43254006 aaatgttgcattggtattgtaaagtgacaattattttgagaaatagaa-aaaatgctaaagagacaataattgtgaga 43254082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 5323022 - 5323068
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  5323022 agtagttaagtttgatgaaattcaataaataagggtataataatgga 5323068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 10366643 - 10366697
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||  ||||||||    
T  10366643 attaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttatt 10366697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 17652781 - 17652739
Alignment:
Q  134 gtagttatgttggatgaaattaaataaataagggtataataat 176  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  17652781 gtagttaagttggatgaaatttaataaataagggtataataat 17652739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 37695667 - 37695709
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  37695667 attaaggaaatgattaattgtgttgatttcaatggtaaaatta 37695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 37695751 - 37695797
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  37695751 agtagttaagttagatgaaattcaataaataagggtataataatgga 37695797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 3901243 - 3901280
Alignment:
Q  142 gttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3901243 gttggatgaaattcaataaataagggtataataatgga 3901280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 30190664 - 30190705
Alignment:
Q  72 aaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  30190664 aaggaaatgattaattgtgttgatttcaatggtaaaattagt 30190705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 1778673 - 1778629
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||    
T  1778673 agtagataagttggatgaaattcaataaataagggtataataatg 1778629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 23004383 - 23004427
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  23004383 attaaggaaatgattaattgtgtcgatttcaatggtaaaattagt 23004427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 27471449 - 27471397
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||| ||||||| |||||||| ||||||||||||||||    
T  27471449 attaagaaaatgattaattatgttgatttcaatggtgaaattagttgcattta 27471397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 39043842 - 39043886
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||    
T  39043842 agtagttaagttgaatgaaattcaataaataagggtataataatg 39043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 36476614 - 36476571
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataat 176  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||    
T  36476614 agtagttaagtttgatgaaattcaataaataagggtataataat 36476571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 38795457 - 38795414
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||||| |||||||||||| || |||||||||||||||||    
T  38795457 ttaaggaaatgattaattgtgtttatttcaatggtaaaattagt 38795414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 1778756 - 1778714
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||    
T  1778756 attaaggaaatgattaattgtgttgatttcaatgataaaatta 1778714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 12904894 - 12904848
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| ||||    
T  12904894 agtaattaagttggatgaaattcaataaataagggtataatagtgga 12904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 19823039 - 19822997
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||| ||||||||||||| |||||||||||||||| |||||    
T  19823039 tagttaagttggatgaaattcaataaataagggtatattaatg 19822997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 24569101 - 24569143
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  24569101 attaagaaaatgattaattgtgttgatttcaatggtaaaatta 24569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 29024050 - 29024096
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||| ||||||||||||| ||||||||| ||||||||||||||    
T  29024050 agtaattaagttggatgaaattcaataaataatggtataataatgga 29024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 30190745 - 30190791
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||| |||||||||| |||||||||    
T  30190745 agtagttaagttggatgaaattcaattaataagggtaaaataatgga 30190791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 36460501 - 36460547
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| ||||    
T  36460501 agtaattaagttggatgaaattcaataaataagggtataatagtgga 36460547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 37773108 - 37773189
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    |||||||| |||||||||||||  ||||||||||||||| ||| || | ||| |  |||||||||||| ||||||||| ||||    
T  37773108 aaatgctgcattggtattgtaaagtgacaattattttgagaaa-aagaaaaattgctaaagagacaattattgtgagacggat 37773189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 44301592 - 44301546
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| |||||||||| |||||||| ||||    
T  44301592 agtagttaagttggatgaaattcaataaataagagtataatagtgga 44301546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 51065155 - 51065235
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttg---aaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||| |||||||||||||  |||||||||||| |   ||||  |||| |||||| |||||||||||||||| |||||    
T  51065155 aaatgctgcattggtattgtaaaatgacaattatttagagaaaaagaaaaaaaaaatactaaagagacaataattatgaga 51065235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 8679148 - 8679185
Alignment:
Q  142 gttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  8679148 gttggatgaaattcaataaataagggtataatagtgga 8679185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 33491084 - 33491125
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatt 110  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||    
T  33491084 attaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 37497522 - 37497478
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||||||||||||| |||||||||  |||||||||||    
T  37497522 agtagttaagttggatgaaattcaataaataaacgtataataatg 37497478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 37773051 - 37773095
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| |||| |||||||| | ||||||||||||||||||||||    
T  37773051 tagttaagttgaatgaaattcattaaataagggtataataatgga 37773095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 44526384 - 44526278
Alignment:
Q  154 taaataaataagggtataataatggatgaaat----gctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaat 249  Q
    |||||||||||||| |||||||||||  ||||    | || |||||||||||||  |||||||||||||   |||||||| ||||||||||||| |||||    
T  44526384 taaataaataagggcataataatggaaaaaatagatgatgcattggtattgtaaaatgacaattatttt---aaataaaaaaaaatattaaagaaacaat 44526288  T
Q  250 aattgtgaga 259  Q
    ||||||||||    
T  44526287 aattgtgaga 44526278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 6643667 - 6643719
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  6643667 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 6643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 47464372 - 47464424
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  47464372 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 47464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 21240795 - 21240841
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  21240795 agtagttaagttggatgaaattcaataaataagggtataataatgga 21240841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 33790822 - 33790868
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  33790822 agtagttaagttggatgaaattcaataaataagggtataataatgga 33790868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 49746991 - 49746945
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49746991 agtagttaagttggatgaaattcaataaataagggtataataatgga 49746945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 7061671 - 7061715
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  7061671 attaaggaaatgattaattgtgttgatttcaatggtaaaattagt 7061715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 48914151 - 48914194
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  48914151 ttaaggaaataattaattgtgttcatttcaatggtaaaattagt 48914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 17237387 - 17237433
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  17237387 agtagttaagttggatgaaattcaataaataagggtataatagtgga 17237433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 38502489 - 38502543
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||  ||||||||    
T  38502489 attaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttatt 38502543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 47464456 - 47464502
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  47464456 agtagttaagttggatgaaattcaataaataagggtataatagtgga 47464502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 49428433 - 49428479
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  49428433 agtaattaagttggatgaaattcaataaataagggtataataatgga 49428479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 255
Target Start/End: Complemental strand, 22130073 - 22129943
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatggatgaaa---------tgctgtattggtattgtaatctgacaattattttgaaaa 223  Q
    |||| ||| ||||||||||||| ||||||||| ||||||||||||||  |||         || || |||||||||||||  ||||||||||||||| ||    
T  22130073 agtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaaataataaatgttgcattggtattgtaaaatgacaattattttgagaa 22129974  T
Q  224 ataaaataaaata-ttaaagagacaataattgt 255  Q
      |||| |||||| |||||||||||||||||||    
T  22129973 --aaaaaaaaatagttaaagagacaataattgt 22129943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 38405194 - 38405239
Alignment:
Q  134 gtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  38405194 gtagttaagttggatgaaattcaataaataaaggtataataatgga 38405239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 6643753 - 6643797
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||    
T  6643753 tagttaagttggatgaaattcaataaataagggtataatagtgga 6643797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 17237303 - 17237347
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||    
T  17237303 attaagaaaataattaattgtgttgattgcaatggtaaaattagt 17237347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 32884915 - 32884863
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||||||| ||||||| |||||||    
T  32884915 attaagaaaatgattaattgtgttgatttcaatggtagaattagtagcattta 32884863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 34360769 - 34360717
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| ||||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  34360769 attaaagaaatgattaattgtattgatttcaatggtaaaattagtagcattta 34360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 35311230 - 35311282
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||| |||| || ||||||||||||||| |||||||||    
T  35311230 attaaggaaatgattaattatgttaatttcaatggtaaaattaattgcattta 35311282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 36985896 - 36985856
Alignment:
Q  73 aggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  36985896 aggaaatgattaattgtgttgatttcaatggtaaaattagt 36985856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 43237357 - 43237313
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| |||||||||||| || |||||||||||||||||    
T  43237357 attaaggaaatgattaattgtgtttatttcaatggtaaaattagt 43237313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 46396890 - 46396942
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||||||||||||| | |||||||    
T  46396890 attaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcattta 46396942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 47773026 - 47773070
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  47773026 attaaggaaataattaattgtgttgattttgatggtaaaattagt 47773070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 51625197 - 51625153
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  51625197 attaagaaaatgattaattgtgttgatttcaatggtaaaattagt 51625153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 28500976 - 28501019
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||    
T  28500976 tagttaagtttgatgaaattcaataaataagggtataataatgg 28501019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 44536203 - 44536246
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattag 112  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||    
T  44536203 attaaggaaatgattaattgtgttgattttaatggtaaaattag 44536246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 2653450 - 2653404
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||||    
T  2653450 agtagttaaattggatgaaatttaataaataaaggtataataatgga 2653404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 3689588 - 3689546
Alignment:
Q  137 gttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||    
T  3689588 gttaagttagatgaaattaaattaataagggtataataatgga 3689546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 6609791 - 6609745
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||| | |||||||||| |||||||||||||    
T  6609791 agtagttaagttggatgaaactcaataaataagagtataataatgga 6609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 26147766 - 26147847
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    ||||| |||||||||||| |||  ||||||||||||||| ||| || | |||||  |||||||||||| ||||||||| ||||    
T  26147766 aaatgttgtattggtattctaaagtgacaattattttgagaaa-aagaaaaaatgataaagagacaattattgtgagacggat 26147847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 28500898 - 28500940
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||    
T  28500898 attaaggaaatgattgattgtgttgatttcaatggtaaaatta 28500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 35311373 - 35311448
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||| || |||||||||||||  ||||||||||||||| ||  |||| || ||  ||||||||||||||||||||||    
T  35311373 aaatgttgcattggtattgtaaagtgacaattattttgagaa--aaaaaaacatgctaaagagacaataattgtgaga 35311448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 35380428 - 35380470
Alignment:
Q  137 gttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||||||||||||| |||||||||| |||||||||||||    
T  35380428 gttaagttggatgaaattcaataaataagagtataataatgga 35380470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 42517645 - 42517687
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  42517645 attaagaaaatgattaattgtgttgatttcaatggtaaaatta 42517687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 47773110 - 47773156
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||||    
T  47773110 agtagttaagttggatgaagttcaataaataagggtattataatgga 47773156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 49428349 - 49428391
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| |||| |||||||||| |||||||||||||||    
T  49428349 attaaggaaatgattatttgtgttgatttcaatggtaaaatta 49428391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 51624816 - 51624770
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  51624816 agtagttaagttggatgaaattcaataaataagggtatgatagtgga 51624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 52869186 - 52869144
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||    
T  52869186 attaaggaaataattaattgtgttgatttcaatagtaagatta 52869144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 5841528 - 5841565
Alignment:
Q  142 gttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  5841528 gttggatgaaattcaataaataaaggtataataatgga 5841565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 43237273 - 43237232
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||| ||||||||    
T  43237273 agtagttaagttggatgaaattcaataaataagtgtataata 43237232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 46396963 - 46397008
Alignment:
Q  134 gtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    ||||||| ||||||| ||||| | ||||||||||||||||||||||    
T  46396963 gtagttaagttggataaaattcattaaataagggtataataatgga 46397008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 49176025 - 49176066
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||| ||||| |||||||||||||||||||    
T  49176025 agtagttaagttggataaaattcaataaataagggtataata 49176066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 49747068 - 49747031
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  49747068 aaataattaattgtgttgatttcaatgataaaattagt 49747031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 50264180 - 50264217
Alignment:
Q  142 gttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  50264180 gttgaatgaaattcaataaataagggtataataatgga 50264217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 2942652 - 2942704
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| ||||| ||||||||||||||| || ||| |||||||||| |||||||    
T  2942652 attaaagaaatgattaattgtgttgatttcgatgataaaattagtagcattta 2942704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 4972601 - 4972561
Alignment:
Q  134 gtagttatgttggatgaaattaaataaataagggtataata 174  Q
    ||||||||||| ||||||||| |||||||||| ||||||||    
T  4972601 gtagttatgttagatgaaattcaataaataagtgtataata 4972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 6609875 - 6609831
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  6609875 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 6609831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 11907606 - 11907650
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  11907606 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 11907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 16821480 - 16821555
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgag 258  Q
    |||||||| ||||||||| |||  ||||||||||||| | ||| | || ||||| ||||||||||||| ||||||||    
T  16821480 aaatgctgcattggtattctaaagtgacaattattttaacaaagagaa-aaaatgttaaagagacaattattgtgag 16821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 17114554 - 17114510
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  17114554 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 17114510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 21325171 - 21325215
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| || ||||||||| || |||||||||||||||||    
T  21325171 attaaggaaatgataaattgtgtttatttcaatggtaaaattagt 21325215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 28911249 - 28911293
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||| ||||||||| |||||||||| |||||||||||||    
T  28911249 tagttaagtttgatgaaattcaataaataagagtataataatgga 28911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 35380340 - 35380392
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||| ||||||| | ||||||||||||||| |||||||    
T  35380340 attaagaaaatgattaattatgttgattttaatggtaaaattagtagcattta 35380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 40122861 - 40122913
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| |||||||| |||||| | |||| |||||||||| |||||||    
T  40122861 attaaggaaatgattaattgcgttgattttaatgttaaaattagtagcattta 40122913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 47464523 - 47464591
Alignment:
Q  191 attggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||||||||   || ||||||||| | ||| | || ||||| |||||||||||||||||||||||    
T  47464523 attggtattgtaaaacgataattattttaagaaaaagaaaaaaatgttaaagagacaataattgtgaga 47464591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 52859806 - 52859850
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  52859806 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 52859850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 41496187 - 41496142
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  41496187 aaataattaattgtgttgatttcaatggtaaaattagttgcattta 41496142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 4818665 - 4818613
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  4818665 attaaggaaataattaattgtgttgatttcaattgtaaaattagtagcattta 4818613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 8698423 - 8698371
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  8698423 attaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcattta 8698371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 40530311 - 40530441
Alignment:
Q  137 gttatgttggatgaaattaaataaataagggtataataatgg---------atgaaatgctgtattggtattgtaatctgacaattattttgaaaaataa 227  Q
    |||| ||||||||||||||||||||||||||||||||| |||         |  |||||||| |||||||||||||  ||||||||||||||||| | ||    
T  40530311 gttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggtattgtaaagtgacaattattttgaaata-aa 40530409  T
Q  228 aataaaatattaaagagacaataattgtgaga 259  Q
     |  || | |||||||||||||||||||||||    
T  40530410 gaagaattgttaaagagacaataattgtgaga 40530441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 6315860 - 6315906
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6315860 agtagttaagttggatgaaattcaataaataagggtataataatgga 6315906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 6753741 - 6753787
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6753741 agtagttaagttggatgaaatttaataaataagggtataataatgga 6753787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 7827925 - 7827979
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    |||||| |||||||||||||||||||| |||||||||||||||||  ||||||||    
T  7827925 attaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttatt 7827979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 6615886 - 6615931
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  6615886 aaataattaattgtgttgatttcaatggtaaaattagtagcattta 6615931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 19929974 - 19929930
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  19929974 tagttaagttggatgaaattcaataaataagggtataataatgga 19929930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 40530223 - 40530275
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  40530223 attaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 40530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 2232072 - 2232126
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    |||||| |||| | ||||||||||||| ||||||||||||||||| |||||||||    
T  2232072 attaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttatt 2232126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 40899948 - 40899902
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  40899948 agtagttaagttagatgaaattcaataaataagggtataataatgga 40899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 2232152 - 2232193
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  2232152 agtagttaagttggatgaaattcaataaataagggtataata 2232193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 15818479 - 15818528
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcat 118  Q
    |||||||||||  |||||||||||||| ||||||||||||||||| ||||    
T  15818479 attaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcat 15818528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 27580630 - 27580503
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg--atgaaatgctgtattggtattgtaatctgacaattattttgaaaaataaaat 230  Q
    |||||||| |||| |||||||||| |||||||  ||||||||||||  |  ||||| || ||||||  |||||  ||||||||||||||| ||| || |     
T  27580630 agtagttaagttgaatgaaattaattaaataaatgtataataatgggaaaaaaatgttgcattggttatgtaaagtgacaattattttgagaaa-aagaa 27580532  T
Q  231 aaaatattaaagagacaataattgtgaga 259  Q
    ||||||||||| ||||||| | |||||||    
T  27580531 aaaatattaaaaagacaattagtgtgaga 27580503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 7828009 - 7828053
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  7828009 agtagttaagttggatgaaatttaataaataaggatataataatg 7828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 27580715 - 27580672
Alignment:
Q  68 aattaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||    
T  27580715 aatttaggaaatgattaattgtgttgatttcaatggtaaaatta 27580672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 41496053 - 41495979
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||| || ||| |||||||||  ||||||||||||||| ||| ||||   ||| |||||||||||||||||||||||    
T  41496053 aaatgttgcattagtattgtaaagtgacaattattttgagaaaaaaaa---aatgttaaagagacaataattgtgaga 41495979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 1248603 - 1248645
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||    
T  1248603 attaaggaaattattaattatgttgatttcaatggtaaaatta 1248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 4818523 - 4818442
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    |||||||  ||||||||| |||  ||||||||||||||| ||| | || ||| | ||||||||||||||||||||||| ||||    
T  4818523 aaatgctacattggtattataaagtgacaattattttgagaaaaagaa-aaattgttaaagagacaataattgtgagacggat 4818442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 6754059 - 6754021
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtata 171  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  6754059 agtagttaagttggatgaaattcaataaataagggtata 6754021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 8698335 - 8698293
Alignment:
Q  137 gttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  8698335 gttaagttggatgaaattcaataaataagggtataatagtgga 8698293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 8725008 - 8725050
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||    
T  8725008 attaaagaaatgattaattgtgttgatttcaatggtaaaatta 8725050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 21060660 - 21060614
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  21060660 agtagttaagttggataaaattcaataaataatggtataataatgga 21060614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 27542825 - 27542779
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||| ||||| |||||||||| |||||||||||||    
T  27542825 agtagttaagttggataaaattcaataaataagagtataataatgga 27542779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 27542909 - 27542867
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||    
T  27542909 attaaggaaatgattgattgtgttgatttcaatggtaaaatta 27542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 30512684 - 30512726
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||    
T  30512684 attaaggaaatgattaattgtattgatttcaatggtaaaatta 30512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 30553024 - 30553066
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||    
T  30553024 attaaggaaatgattaattgtattgatttcaatggtaaaatta 30553066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 31655083 - 31655037
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||| |||||||| |||||||| ||||||||||||||||||| ||||    
T  31655083 agtaattatgttgaatgaaattcaataaataagggtataatagtgga 31655037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 31655167 - 31655125
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||    
T  31655167 attaaagaaatgattaattgtgttgatttcaatggtaaaatta 31655125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 2232212 - 2232288
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||  |||||||||||||  |||||||||||| || | | | || ||||| |||||||||||||||||||||||    
T  2232212 aaatgctacattggtattgtaaaatgacaattatttagagataaagaa-aaaatgttaaagagacaataattgtgaga 2232288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 22848467 - 22848508
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  22848467 agtagttagattggatgaaattcaataaataagggtataata 22848508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 2588067 - 2588111
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  2588067 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 2588111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 9515848 - 9515816
Alignment:
Q  81 attaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||||||| |||||||||||||||||    
T  9515848 attaattgtgttgatttcaatggtaaaattagt 9515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 30512771 - 30512815
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||    
T  30512771 tagttaagttggatgaaatttaataaataaggatataatgatgga 30512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 30553111 - 30553155
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||    
T  30553111 tagttaagttggatgaaatttaataaataaggatataatgatgga 30553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 23168997 - 23169049
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  23168997 attaagaaaataattaattgtgttgatttcaatggtaaaattagtagcattta 23169049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 28749105 - 28749053
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  28749105 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 28749053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 39864225 - 39864173
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  39864225 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 39864173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 33733364 - 33733497
Alignment:
Q  147 atgaaattaaataaataagggtataataatggatga--------aatgctgtattggtattgtaatctgacaattattttga--aaaataaaataaaata 236  Q
    |||||||| ||||||||||||||||||||||||  |        ||||||  ||||||||| |||  |||||||||||||||  ||||||||| ||||||    
T  33733364 atgaaattcaataaataagggtataataatggaaaagaataataaatgcttcattggtattctaaagtgacaattattttgagaaaaataaaaaaaaata 33733463  T
Q  237 ttaaagagacaataattgtgagaaggataaagta 270  Q
     |||| ||||||| ||||||||| |||| |||||    
T  33733464 ctaaaaagacaattattgtgagacggatgaagta 33733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 12039055 - 12038974
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttga-aaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    ||||| || ||| |||||||||  ||||||||||||||| |||||||||  ||||| |||||||||||||||||||||| ||||    
T  12039055 aaatgttgcattagtattgtaaagtgacaattattttgagaaaataaaa--aaatactaaagagacaataattgtgagacggat 12038974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 12039196 - 12039152
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  12039196 attaaggaaatgattaattgtgttgatttcaatggtaaaattagt 12039152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 31042911 - 31042867
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  31042911 attaaggaaatgattaattgtgttgatttcaatggtaaaattagt 31042867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 25089174 - 25089220
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||    
T  25089174 agtagttaagttggatgaaattcaataaataagggtatactaatgga 25089220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 35682882 - 35682928
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  35682882 agtagttaagttggatgaaattcaataaataagggtataatagtgga 35682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 39864141 - 39864095
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  39864141 agtagttaagttggatgaaattcaataaataagggtataatagtgga 39864095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 38787371 - 38787326
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||    
T  38787371 agtagttaaattggatgaaattcaataaataagggtataataatgg 38787326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 7759243 - 7759199
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||    
T  7759243 tagttaagttgaatgaaattcaataaataagggtataataatgga 7759199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 36702034 - 36701991
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||    
T  36702034 ttaaggaaatgattaattatgttgatttcaatggtaaaattagt 36701991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 36718138 - 36718095
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||    
T  36718138 ttaaggaaatgattaattatgttgatttcaatggtaaaattagt 36718095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 37177868 - 37177825
Alignment:
Q  131 atagtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||    
T  37177868 atagtagttaagttggataaaattaaataaataagagtataata 37177825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 6785286 - 6785240
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||| ||||    
T  6785286 agtagttaagtttgatgaaattcaataaataagggtataatagtgga 6785240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 14757682 - 14757728
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||| ||||    
T  14757682 agtagttaagttcgatgaaatttaataaataagggtataatagtgga 14757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 24991657 - 24991699
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||    
T  24991657 attaaggaaatgattaattgtgttgatttcaacggtaaaatta 24991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 24991799 - 24991880
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgagaaggat 264  Q
    ||||| || ||| |||||||||  ||||||||||||||| ||  |||| |||||  |||||||||||||||||||||| ||||    
T  24991799 aaatgttgcattagtattgtaaagtgacaattattttgagaaggaaaa-aaaatgctaaagagacaataattgtgagacggat 24991880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 26093508 - 26093466
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  26093508 attaagaaaatgattaattgtgttgatttcaatggtaaaatta 26093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 32826082 - 32826128
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||||    
T  32826082 agtagttaagttggatgaagttcaataaataagggtattataatgga 32826128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 37276481 - 37276447
Alignment:
Q  143 ttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||||||| ||||||||||||||||||||||    
T  37276481 ttggatgaaattcaataaataagggtataataatg 37276447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37506154 - 37506108
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| |||| |||||||| ||||||||||||||| ||||||||    
T  37506154 agtagttaagttgaatgaaattcaataaataagggtattataatgga 37506108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 6160549 - 6160633
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatggatgaaatgctgtattggtattgtaatctgacaattattttga 220  Q
    |||||| |||| ||| |||| |||||| ||||||||||||||| || ||||| || |||| |||| |||  |||||||||||||||    
T  6160549 tagttaagttgaatgtaattcaataaacaagggtataataatgcat-aaatgttgcattgatattctaaaatgacaattattttga 6160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 9307657 - 9307616
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| ||||||||| |||||||||    
T  9307657 agtagttaagttggatgaaattcaataaataaaggtataata 9307616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 20209928 - 20209973
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| |||||||||| || ||||||||||||||| |||||||    
T  20209928 agtagttaagttggatgaagttcaataaataagggtattataatgg 20209973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 35367832 - 35367791
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||| ||||||||| |||||||||||||||||||    
T  35367832 agtagttaagttagatgaaattcaataaataagggtataata 35367791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 40144935 - 40144980
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| |||||||||| || ||||||||||||||| |||||||    
T  40144935 agtagttaagttggatgaagttcaataaataagggtattataatgg 40144980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 917052 - 917008
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| |||| |||||||| |||||||||||||| |||||||||    
T  917052 tagttaagttgcatgaaatttaataaataagggtaaaataatgga 917008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 6023804 - 6023871
Alignment:
Q  191 attggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||| ||||||||  ||| ||||||||||||||| | || ||||||||||  |||||||||||||||||    
T  6023804 attgatattgtaagatgataattattttgaaaaaaagaa-aaaatattaacaagacaataattgtgaga 6023871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 9307741 - 9307689
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||| ||||||||| |||||| |||||||| | |||||||    
T  9307741 attaaggaaatgattaactgtgttgatttcaatgataaaattaatagcattta 9307689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 21910010 - 21910054
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  21910010 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 21910054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 43500788 - 43500840
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| |  |||||| |||||||| ||||||    
T  43500788 attaaggaaattattaattgtgttgattttgatggtataattagtttcattta 43500840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 49224074 - 49224118
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||    
T  49224074 agtagttaagttggatgaagttcaataaataagggtattataatg 49224118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 52429374 - 52429330
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||    
T  52429374 agtagttaagttgaatgaaattcattaaataagggtataataatg 52429330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 17149 - 17095
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  17149 attaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttatt 17095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 35314001 - 35313947
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||    
T  35314001 attaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttatt 35313947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 7494921 - 7494965
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  7494921 agtagttaagttggatgaaattcaataaataagggtataataatg 7494965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 8947135 - 8947179
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  8947135 agtagttaagttggatgaaattcaataaataagggtataataatg 8947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 8928582 - 8928504
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattatttt-gaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||| ||| ||||||||| |||  ||||||||||||  |||||| | || |||||||||||||||||||||||||||||    
T  8928582 aaatactgcattggtattataaagtgacaattatttaagaaaaaaagaaaaaaatattaaagagacaataattgtgaga 8928504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 9458349 - 9458395
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  9458349 agtagtaaagttggatgaaatttaataaataagggtataataatgga 9458395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 17695360 - 17695314
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  17695360 agtagttaagttggatgaaattcaataaataagggtataatagtgga 17695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 19937791 - 19937749
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  19937791 attaaggaaatgattaattgtgttgatttcaatggtaaaatta 19937749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 25637511 - 25637465
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  25637511 agtagttaagttggatgaaatttaataaataagggtgtaataatgga 25637465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 36354526 - 36354572
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  36354526 agtagttaagttggatgaaattcaataaataatggtataataatgga 36354572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37322458 - 37322412
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  37322458 agtagttaagttagatgaaattcaataaataagggtataataatgga 37322412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 43410540 - 43410498
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  43410540 attaaggaaattattaattgtgttgatatcaatgataaaatta 43410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 8947051 - 8947095
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||    
T  8947051 attaaggaaatgattaattgtgttgatttcaatgataaaattagt 8947095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 3323292 - 3323339
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagttgcatttatt 123  Q
    |||| ||||||||||||||| |||||||||||||||||  ||||||||    
T  3323292 aaatgattaattgtgttgatttcaatggtaaaattagtaacatttatt 3323339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 5272232 - 5272267
Alignment:
Q  143 ttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||||||| |||||||||||||||||||||||    
T  5272232 ttggatgaaattcaataaataagggtataataatgg 5272267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 26863515 - 26863578
Alignment:
Q  196 tattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||||||  ||||||||||||||||||| | || ||||||||||||| || |||||| |||||    
T  26863515 tattgtaaagtgacaattattttgaaaaaaagaaaaaaatattaaagaaaccataattatgaga 26863578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 35313846 - 35313784
Alignment:
Q  196 tattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||||||  ||||||||||||||| ||| | || ||||| |||||||||||||||||||||||    
T  35313846 tattgtaaagtgacaattattttgagaaaaagaa-aaaatgttaaagagacaataattgtgaga 35313784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 39691520 - 39691474
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||    
T  39691520 agtagtaaagttgaatgaaattcaataaataagggtataataatgga 39691474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 45235695 - 45235653
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatta 111  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||    
T  45235695 attaaggaaatgattgattgtgttgatttcaatggtaaaatta 45235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 3323412 - 3323488
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    |||||||| |||||||||||||  ||| ||||||||||| ||| || | |||||  |||||||||||||||| |||||    
T  3323412 aaatgctgcattggtattgtaaagtgagaattattttgagaaa-aagaaaaaatgctaaagagacaataattatgaga 3323488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 7438935 - 7438976
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| |||| |||||||| |||||||||||||||||||    
T  7438935 agtagttaagttgaatgaaattcaataaataagggtataata 7438976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 17695444 - 17695403
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatt 110  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||    
T  17695444 attaaggaaatgattaattgtattgatttcaatggtaaaatt 17695403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 26607967 - 26608008
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaatt 110  Q
    |||||| |||| ||||||||||||||| ||||||||||||||    
T  26607967 attaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 28170589 - 28170634
Alignment:
Q  76 aaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||| ||||||| ||||||| |||| ||||||||||||||||||||    
T  28170589 aaatgattaattatgttgatttcaagggtaaaattagttgcattta 28170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 39785615 - 39785570
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| |||||||||| || ||||||||||||||| |||||||    
T  39785615 agtagttaagttggatgaagttcaataaataagggtattataatgg 39785570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 5789647 - 5789699
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||| ||||  ||||| ||||||||||| |||||||    
T  5789647 attaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattta 5789699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 5789733 - 5789777
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  5789733 tagttaagttggatgaaattcaataaataatggtataatagtgga 5789777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 9458270 - 9458314
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||| |||||||||||||||||||| |  ||||||||||||||    
T  9458270 attaagaaaataattaattgtgttgattttgatggtaaaattagt 9458314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 15359170 - 15359214
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||    
T  15359170 agtagttaagttggatgaagttcaataaataagggtattataatg 15359214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 16463803 - 16463759
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  16463803 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 16463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 18853200 - 18853232
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatg 102  Q
    |||||||||||||||||||||||||| ||||||    
T  18853200 ttaaggaaataattaattgtgttgatttcaatg 18853232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 27501537 - 27501581
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| || |||| ||||||| |||||||||||||||||    
T  27501537 attaaggaaatgataaattatgttgatttcaatggtaaaattagt 27501581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 34120522 - 34120566
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||    
T  34120522 tagttaagttggatgaaattcaataagtaagagtataataatgga 34120566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 34225620 - 34225576
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||| ||| |||| |||||||| ||||||||||||||||||||||    
T  34225620 agtatttaagttgaatgaaatttaataaataagggtataataatg 34225576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 36794314 - 36794270
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||    
T  36794314 agtagttaagttggatgaagttcaataaataagggtattataatg 36794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 36794398 - 36794354
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  36794398 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 36794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 39785702 - 39785658
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||    
T  39785702 attaaggaaatgattaattgtgttgattttgatggtaaaattagt 39785658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 43115801 - 43115853
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| ||||| ||||||||||||||| |||||| |||| ||||| |||||||    
T  43115801 attaaagaaatgattaattgtgttgatttcaatgataaagttagtagcattta 43115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 31894210 - 31894262
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  31894210 attaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcattta 31894262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 31283488 - 31283612
Alignment:
Q  136 agttatgttggatgaaattaaataaataagggtataataatgg--atgaaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaa 233  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||  |  ||||| || |||| |||| |||  ||| ||||||||||| ||| || | |||    
T  31283488 agttaagttggatgaaattcaataaataaggatataataatgggaaaaaaatgttgcattgttattttaaagtgataattattttgagaaa-aataaaaa 31283586  T
Q  234 atattaaagagacaataattgtgaga 259  Q
    ||  |||||||||||| |||||||||    
T  31283587 atggtaaagagacaattattgtgaga 31283612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 181586 - 181545
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  181586 agtagttaagttggatgaaattcaataaataagggtataata 181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 11656030 - 11656075
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||    
T  11656030 agtagtaaagttggatgaaattcaataaataagggtataataatgg 11656075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 31894294 - 31894335
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  31894294 agtagttaagttggatgaaatttaataaataagggtataata 31894335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 13909538 - 13909494
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  13909538 attaaggaaatgattaaatgtgttgatttcaatggtaaaattagt 13909494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 23142781 - 23142729
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    |||||| |||| ||||||||||||||| |||||||||||| |||| |||||||    
T  23142781 attaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcattta 23142729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 29363334 - 29363290
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||    
T  29363334 tagttaagttggatgaaattcaataaataagagtataataatgga 29363290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 1781915 - 1781864
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||| |||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  1781915 ttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcattta 1781864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 7072273 - 7072230
Alignment:
Q  70 ttaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||| |||||||||||||||||||| | |||||||||||||||    
T  7072273 ttaagaaaataattaattgtgttgattttaatggtaaaattagt 7072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 33510170 - 33510127
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataat 176  Q
    |||||||| ||||||||||||| | |||||||||||||||||||    
T  33510170 agtagttaagttggatgaaatttattaaataagggtataataat 33510127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 21010203 - 21010157
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||||||||| |||||||||  |||||||||||||    
T  21010203 agtagttaagttggatgaaattcaataaataacagtataataatgga 21010157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 34639454 - 34639496
Alignment:
Q  71 taaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  34639454 taaggaaataattaattgtgttaatttcaatggtgaaattagt 34639496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 3720382 - 3720458
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttgaaaaataaaataaaatattaaagagacaataattgtgaga 259  Q
    ||||| || ||||| |||||||  ||||||||||||||| ||| | || |||||  ||||||||||||||||||||||    
T  3720382 aaatgatgcattggcattgtaaattgacaattattttgagaaaaagaa-aaaatgataaagagacaataattgtgaga 3720458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 15046153 - 15046113
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  15046153 agtagtta-gttggatgaaattcaataaataagggtataata 15046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 15058147 - 15058106
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  15058147 agtatttaagttggatgaaattcaataaataagggtataata 15058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 11143671 - 11143715
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||    
T  11143671 agtagttaagttggatgaagttcaataaataagggtattataatg 11143715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 21425641 - 21425681
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataat 173  Q
    |||||||| ||||||||||||| ||||||||||| ||||||    
T  21425641 agtagttaagttggatgaaattcaataaataaggatataat 21425681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 21478236 - 21478284
Alignment:
Q  182 aaatgctgtattggtattgtaatctgacaattattttga-aaaataaaa 229  Q
    ||||| ||||||||||||||||  ||||||||||||||| |||||||||    
T  21478236 aaatgttgtattggtattgtaaagtgacaattattttgagaaaataaaa 21478284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 1734 - 1688
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  1734 agtagttaagttggattaaattcaataaataagggtataataatgga 1688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 695 - 737
Alignment:
Q  79 taattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||||||||| ||||||||||||||| | |||||||    
T  695 taattaattgtgttgatttcaatggtaaaattaatagcattta 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 779 - 815
Alignment:
Q  143 ttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  779 ttggatgaaattcaataaataagggtataatagtgga 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 20438 - 20480
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataa 175  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||    
T  20438 agtagttaagttggatgaaattcaataaatgagggtataataa 20480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 50234 - 50193
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||| ||| |||| ||||||||||||||||||||||||||||    
T  50234 agtaattaagttgaatgaaattaaataaataagggtataata 50193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 50318 - 50274
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagt 113  Q
    ||||||||||| |||||||||||| || |||||| ||||||||||    
T  50318 attaaggaaatgattaattgtgttaatttcaatgataaaattagt 50274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 136122 - 136163
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||| ||||||||||||||||||| |||||||||    
T  136122 agtagttaagtttgatgaaattaaataaataatggtataata 136163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 76322 - 76281
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataata 174  Q
    |||||||| ||| ||||||||| |||||||||||||||||||    
T  76322 agtagttaagttagatgaaattcaataaataagggtataata 76281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 105714 - 105669
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatgg 178  Q
    |||||||| |||| ||||||||  ||||||||||||||||||||||    
T  105714 agtagttaagttgaatgaaattcgataaataagggtataataatgg 105669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 2042 - 2010
Alignment:
Q  146 gatgaaattaaataaataagggtataataatgg 178  Q
    ||||||||| |||||||||||||||||||||||    
T  2042 gatgaaattcaataaataagggtataataatgg 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 16212 - 16160
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||||||||| | |||| |||||||| | |||||||    
T  16212 attaaggaaatgattaattgtgttgattttaatgataaaattaatagcattta 16160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 34020 - 34072
Alignment:
Q  69 attaaggaaataattaattgtgttgatatcaatggtaaaattagttgcattta 121  Q
    ||||||||||| ||||||||| ||||  ||||| ||||||||||| |||||||    
T  34020 attaaggaaatgattaattgtattgaattcaatagtaaaattagtggcattta 34072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 34106 - 34150
Alignment:
Q  135 tagttatgttggatgaaattaaataaataagggtataataatgga 179  Q
    |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  34106 tagttaagttggatgaaattcaataaataatggtataatagtgga 34150  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 252889 - 252933
Alignment:
Q  133 agtagttatgttggatgaaattaaataaataagggtataataatg 177  Q
    |||||||| |||| |||||||| |||||||||| |||||||||||    
T  252889 agtagttaagttgaatgaaattcaataaataagagtataataatg 252933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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