View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0688_low_10 (Length: 468)
Name: NF0688_low_10
Description: NF0688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0688_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 28 - 461
Target Start/End: Complemental strand, 45068856 - 45068423
Alignment:
| Q |
28 |
cagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttagaacaagagacaa |
127 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068856 |
cagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttagaacaagagacaa |
45068757 |
T |
|
| Q |
128 |
aacattggcctacaagtagcacgaactcatcactcatcaaaacagaacttgtcattgagtattgaccaaatacaatttcttttaacattaattgttgata |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068756 |
aacattggcctacaagtagcacgaactcatcactcatcaaaacagaacttgtcattgagtattgaccaaatacaatttcttttaacattaattgttgata |
45068657 |
T |
|
| Q |
228 |
ttcnnnnnnnataggcaaatgttagtgattaattagttaagaggagggagaaatgtttgtcgcagggatcgaactctgaacttgctacatagaactcctt |
327 |
Q |
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||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068656 |
ttctttttttataggcaaatgttagtgattaattagttaaggggagggagaaatgtttgtcgcagggatcgaactctgaacttgctacatagaactcctt |
45068557 |
T |
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| Q |
328 |
cggtttcctaacccttatcattgggctacaccgtcgaagacattgtcgatatttgtttgacgtatactaacctcaacctcaacctctaagcaaagagatt |
427 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
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| T |
45068556 |
cggtttcctaacccttatcattgggctacaccgtcaaagacattgtcgatatttgtttgacgtatactaacctcaacctcaacctcaaagcgaagagatt |
45068457 |
T |
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| Q |
428 |
gagacttgatccaataactttcatgcctatgcta |
461 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
45068456 |
gagacttgatccaataactttcatgcctatgcta |
45068423 |
T |
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