View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0688_low_46 (Length: 312)
Name: NF0688_low_46
Description: NF0688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0688_low_46 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 284
Target Start/End: Original strand, 33645200 - 33645474
Alignment:
| Q |
10 |
aagaatatcataaaagctaatgagtcctagggttggaaaatattgagattgtacctccaagaagtacaccaattctgagtgcctttccacatttgctaga |
109 |
Q |
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| T |
33645200 |
aagaaaatcataaaagctaatgagtcctagggttggaaaatattgagattgtacctccaagaagtacaccaattctgagtgcctttccacatttgctaga |
33645299 |
T |
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| Q |
110 |
cccaagtgttgaaggactgcaacgtgaaactgatgataaggcaaacacataaaacatggattagaaaagtttaaatatttatcactatactcaaggaaaa |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |
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| T |
33645300 |
cccaagtgttgaaggactgcaacgtgaaactgatgataaggcaaacacataaaacatggattagaaaagttcaaatatttagcactatacttaaggaaaa |
33645399 |
T |
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| Q |
210 |
tcaaatagttagtagtactgcagtcactaattatcggatttggattccaccaagtaaacgtacgacacatttatt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33645400 |
tcaaatagttagtagtactgcagtcactaattatcggatttggattccaccaagtaaacgtacgacacatttatt |
33645474 |
T |
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