View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0688_low_7 (Length: 496)

Name: NF0688_low_7
Description: NF0688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0688_low_7
NF0688_low_7
[»] chr4 (29 HSPs)
chr4 (29-280)||(27632312-27632563)
chr4 (30-280)||(23426065-23426315)
chr4 (26-280)||(53011624-53011877)
chr4 (30-280)||(19661295-19661544)
chr4 (30-280)||(28463487-28463737)
chr4 (26-280)||(32130689-32130942)
chr4 (36-280)||(41038170-41038415)
chr4 (26-280)||(44477949-44478205)
chr4 (30-280)||(11681641-11681892)
chr4 (30-280)||(11689920-11690171)
chr4 (30-280)||(29221520-29221770)
chr4 (30-280)||(23256511-23256758)
chr4 (62-280)||(29579827-29580045)
chr4 (26-280)||(16072505-16072763)
chr4 (30-268)||(21791461-21791695)
chr4 (57-217)||(35653943-35654102)
chr4 (87-280)||(5545301-5545493)
chr4 (30-210)||(43154758-43154936)
chr4 (87-217)||(10575486-10575615)
chr4 (87-184)||(45172640-45172736)
chr4 (30-146)||(21168972-21169088)
chr4 (57-268)||(22423626-22423837)
chr4 (87-210)||(55134180-55134303)
chr4 (44-217)||(34982154-34982325)
chr4 (30-184)||(24449040-24449195)
chr4 (30-184)||(26329026-26329178)
chr4 (154-280)||(51066324-51066449)
chr4 (216-280)||(16887882-16887947)
chr4 (140-176)||(51066667-51066703)
[»] chr8 (26 HSPs)
chr8 (26-268)||(13585210-13585452)
chr8 (26-268)||(18420520-18420762)
chr8 (30-280)||(43967969-43968219)
chr8 (26-279)||(7857996-7858249)
chr8 (26-268)||(3471506-3471753)
chr8 (56-274)||(43926228-43926446)
chr8 (64-268)||(44664957-44665161)
chr8 (62-280)||(18112063-18112282)
chr8 (30-268)||(32098090-32098326)
chr8 (67-230)||(27074526-27074688)
chr8 (26-218)||(42951726-42951926)
chr8 (116-280)||(1004059-1004222)
chr8 (44-217)||(34523914-34524085)
chr8 (36-210)||(3628717-3628889)
chr8 (30-186)||(5869315-5869468)
chr8 (87-210)||(23567244-23567366)
chr8 (44-217)||(12531489-12531660)
chr8 (88-184)||(39697933-39698029)
chr8 (153-267)||(36515069-36515182)
chr8 (101-270)||(29372343-29372510)
chr8 (30-209)||(30915258-30915439)
chr8 (30-184)||(35874840-35874995)
chr8 (30-209)||(33452709-33452885)
chr8 (133-239)||(42777763-42777867)
chr8 (30-95)||(3445597-3445661)
chr8 (117-218)||(42076110-42076212)
[»] chr6 (27 HSPs)
chr6 (26-280)||(57599-57853)
chr6 (26-280)||(3514749-3515003)
chr6 (26-280)||(2618267-2618520)
chr6 (26-280)||(6360672-6360924)
chr6 (26-280)||(6754118-6754371)
chr6 (31-239)||(29149316-29149526)
chr6 (30-268)||(7525078-7525315)
chr6 (42-280)||(12614617-12614852)
chr6 (26-239)||(29401051-29401263)
chr6 (32-268)||(628007-628243)
chr6 (97-273)||(22503728-22503901)
chr6 (64-184)||(3748563-3748683)
chr6 (56-184)||(30915361-30915489)
chr6 (87-184)||(1690628-1690725)
chr6 (89-184)||(14893412-14893507)
chr6 (102-181)||(31860989-31861067)
chr6 (30-184)||(19231529-19231681)
chr6 (87-184)||(350386-350484)
chr6 (87-217)||(29308430-29308559)
chr6 (140-268)||(6294279-6294405)
chr6 (42-114)||(24455146-24455218)
chr6 (117-210)||(21946109-21946201)
chr6 (57-217)||(1093004-1093162)
chr6 (30-184)||(11088472-11088616)
chr6 (216-280)||(31258471-31258536)
chr6 (101-160)||(31234899-31234956)
chr6 (30-94)||(31258543-31258606)
[»] chr1 (43 HSPs)
chr1 (30-280)||(48722269-48722521)
chr1 (30-280)||(30899570-30899823)
chr1 (26-218)||(12884099-12884290)
chr1 (30-268)||(6150636-6150875)
chr1 (26-274)||(14084605-14084853)
chr1 (26-280)||(10109630-10109885)
chr1 (30-268)||(20905197-20905437)
chr1 (30-280)||(29207997-29208247)
chr1 (26-280)||(50552406-50552660)
chr1 (26-280)||(51110000-51110254)
chr1 (43-280)||(17487182-17487419)
chr1 (26-280)||(18127836-18128090)
chr1 (30-280)||(25930518-25930768)
chr1 (88-280)||(28885570-28885762)
chr1 (26-280)||(52055462-52055716)
chr1 (30-268)||(27703442-27703677)
chr1 (30-239)||(33124571-33124781)
chr1 (109-280)||(1-172)
chr1 (30-268)||(30004819-30005052)
chr1 (30-268)||(50371050-50371286)
chr1 (44-217)||(12971336-12971507)
chr1 (30-239)||(5560399-5560606)
chr1 (30-186)||(6333509-6333664)
chr1 (161-280)||(52240435-52240554)
chr1 (30-268)||(15441206-15441441)
chr1 (57-217)||(42740052-42740211)
chr1 (30-217)||(37873725-37873911)
chr1 (89-217)||(17674317-17674444)
chr1 (62-217)||(44836688-44836838)
chr1 (106-217)||(13120829-13120939)
chr1 (87-210)||(24556778-24556900)
chr1 (30-186)||(1269475-1269622)
chr1 (26-109)||(28189309-28189391)
chr1 (87-217)||(22386799-22386929)
chr1 (89-183)||(9777387-9777482)
chr1 (30-94)||(20470643-20470706)
chr1 (217-280)||(20470713-20470777)
chr1 (117-172)||(3907473-3907528)
chr1 (30-210)||(26486343-26486513)
chr1 (57-136)||(31369432-31369511)
chr1 (57-175)||(38263806-38263924)
chr1 (103-158)||(3547674-3547730)
chr1 (116-160)||(32810370-32810414)
[»] chr2 (34 HSPs)
chr2 (30-280)||(26151646-26151897)
chr2 (30-280)||(19367318-19367568)
chr2 (26-280)||(25222234-25222488)
chr2 (30-280)||(42411457-42411706)
chr2 (26-280)||(18676209-18676464)
chr2 (30-280)||(41096436-41096687)
chr2 (30-280)||(7993548-7993798)
chr2 (30-280)||(45618892-45619141)
chr2 (30-280)||(2063721-2063970)
chr2 (30-280)||(13020337-13020588)
chr2 (71-280)||(4855948-4856158)
chr2 (26-268)||(45042299-45042543)
chr2 (30-280)||(6530574-6530824)
chr2 (30-218)||(34061817-34062004)
chr2 (26-264)||(42759671-42759901)
chr2 (26-280)||(12269337-12269589)
chr2 (26-280)||(36481317-36481559)
chr2 (87-217)||(18172903-18173032)
chr2 (30-184)||(39081314-39081467)
chr2 (36-184)||(1418832-1418978)
chr2 (87-217)||(15457472-15457602)
chr2 (57-223)||(36059863-36060027)
chr2 (87-239)||(38985651-38985801)
chr2 (63-210)||(13997262-13997408)
chr2 (87-184)||(18916049-18916146)
chr2 (87-217)||(21747193-21747322)
chr2 (35-210)||(1226236-1226408)
chr2 (105-210)||(27302498-27302602)
chr2 (25-268)||(31273078-31273318)
chr2 (87-217)||(17117608-17117729)
chr2 (117-217)||(38599404-38599502)
chr2 (30-186)||(13001560-13001708)
chr2 (87-217)||(29480600-29480729)
chr2 (133-186)||(9029622-9029675)
[»] chr3 (37 HSPs)
chr3 (30-280)||(23164471-23164720)
chr3 (26-280)||(28132635-28132888)
chr3 (26-280)||(29387653-29387907)
chr3 (28-280)||(46791596-46791848)
chr3 (35-280)||(21784682-21784927)
chr3 (26-280)||(52655022-52655278)
chr3 (30-280)||(8364087-8364338)
chr3 (26-280)||(27729668-27729922)
chr3 (26-280)||(18408103-18408356)
chr3 (30-280)||(24252534-24252785)
chr3 (30-280)||(25598986-25599236)
chr3 (30-268)||(41706963-41707204)
chr3 (30-280)||(51939454-51939704)
chr3 (26-280)||(23067623-23067879)
chr3 (30-227)||(54430468-54430663)
chr3 (56-274)||(13401400-13401619)
chr3 (44-280)||(6715379-6715604)
chr3 (57-217)||(36538149-36538308)
chr3 (118-280)||(20762052-20762214)
chr3 (56-186)||(7767004-7767134)
chr3 (30-184)||(27303103-27303256)
chr3 (44-184)||(21596265-21596404)
chr3 (87-217)||(42009225-42009354)
chr3 (87-210)||(48626999-48627121)
chr3 (67-210)||(19965850-19965992)
chr3 (172-280)||(27110771-27110879)
chr3 (87-217)||(1255015-1255142)
chr3 (102-217)||(50677277-50677391)
chr3 (87-184)||(46904714-46904811)
chr3 (56-265)||(51146879-51147085)
chr3 (122-239)||(15987207-15987322)
chr3 (30-184)||(40152124-40152278)
chr3 (87-181)||(1649829-1649923)
chr3 (30-104)||(27110882-27110956)
chr3 (87-160)||(43905862-43905935)
chr3 (101-180)||(4207357-4207430)
chr3 (421-454)||(25320099-25320132)
[»] chr7 (35 HSPs)
chr7 (31-280)||(33909980-33910229)
chr7 (26-280)||(6379983-6380238)
chr7 (26-280)||(11672495-11672751)
chr7 (30-280)||(18015479-18015730)
chr7 (31-280)||(36796270-36796520)
chr7 (30-280)||(33419016-33419267)
chr7 (26-280)||(42161021-42161275)
chr7 (42-280)||(44893928-44894166)
chr7 (26-229)||(46221654-46221856)
chr7 (30-239)||(4099883-4100092)
chr7 (102-280)||(12251187-12251365)
chr7 (62-268)||(7636236-7636443)
chr7 (30-268)||(32956690-32956927)
chr7 (26-182)||(8358291-8358447)
chr7 (30-217)||(26633279-26633464)
chr7 (44-210)||(26282510-26282676)
chr7 (89-210)||(773852-773974)
chr7 (30-220)||(30739038-30739227)
chr7 (87-181)||(40001694-40001788)
chr7 (35-268)||(36438264-36438494)
chr7 (30-184)||(41908092-41908247)
chr7 (30-217)||(40841208-40841394)
chr7 (57-217)||(42311952-42312110)
chr7 (30-184)||(9479043-9479196)
chr7 (87-216)||(18895361-18895489)
chr7 (30-169)||(25061820-25061957)
chr7 (57-176)||(40737994-40738113)
chr7 (120-211)||(3799730-3799819)
chr7 (62-217)||(1365956-1366110)
chr7 (30-272)||(41852208-41852446)
chr7 (87-217)||(7366659-7366788)
chr7 (117-210)||(44876126-44876217)
chr7 (27-101)||(12251466-12251539)
chr7 (139-184)||(25610090-25610135)
chr7 (30-77)||(38525100-38525147)
[»] scaffold0126 (1 HSPs)
scaffold0126 (42-280)||(16637-16875)
[»] chr5 (31 HSPs)
chr5 (26-280)||(13474541-13474795)
chr5 (26-280)||(13656119-13656375)
chr5 (27-280)||(12661216-12661474)
chr5 (30-280)||(26377672-26377924)
chr5 (64-280)||(13423813-13424029)
chr5 (64-280)||(19099213-19099429)
chr5 (56-219)||(36718526-36718690)
chr5 (57-217)||(138086-138245)
chr5 (44-217)||(29156120-29156291)
chr5 (44-217)||(43511548-43511719)
chr5 (56-280)||(26311947-26312153)
chr5 (87-217)||(5829357-5829484)
chr5 (57-210)||(4734552-4734704)
chr5 (44-217)||(10591236-10591407)
chr5 (89-217)||(17513899-17514026)
chr5 (30-170)||(27351265-27351404)
chr5 (87-217)||(42291844-42291973)
chr5 (87-184)||(20975957-20976054)
chr5 (30-123)||(8398896-8398989)
chr5 (62-210)||(10033493-10033641)
chr5 (57-268)||(40956255-40956465)
chr5 (30-172)||(23069136-23069277)
chr5 (87-184)||(18873425-18873526)
chr5 (87-217)||(17325816-17325946)
chr5 (119-217)||(7390363-7390460)
chr5 (118-184)||(33281677-33281743)
chr5 (124-217)||(3349692-3349784)
chr5 (57-210)||(40779134-40779286)
chr5 (117-210)||(931382-931469)
chr5 (87-184)||(16515496-16515593)
chr5 (30-162)||(8379538-8379669)
[»] scaffold0181 (1 HSPs)
scaffold0181 (42-280)||(17031-17270)
[»] scaffold0564 (1 HSPs)
scaffold0564 (30-274)||(988-1220)
[»] scaffold0100 (1 HSPs)
scaffold0100 (26-268)||(46086-46326)
[»] scaffold0035 (1 HSPs)
scaffold0035 (140-280)||(22704-22844)
[»] scaffold0606 (1 HSPs)
scaffold0606 (63-186)||(8388-8511)


Alignment Details
Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 29 - 280
Target Start/End: Original strand, 27632312 - 27632563
Alignment:
Q  29 attttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  27632312 attttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatcaaaccacccctaatttgtataat 27632411  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  27632412 cacttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcatttttttcttcgcataaatcattcgctttaccc-ttttccacaacag 27632510  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  27632511 agtagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 27632563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 23426315 - 23426065
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| |||| |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||||||||    
T  23426315 ttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataatc 23426216  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  23426215 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacaga 23426117  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  23426116 ggagtgacaaatccaaacaacgccgttagataaatttcacctctttcactta 23426065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 53011624 - 53011877
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||| |||||| || ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  53011624 atcattttctttctttagtacacgtttgagttttt-tctaaactctaattctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtat 53011722  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  53011723 aatcacttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcatttttttcttcgcataaaccattcattttaccc-ttttccacaa 53011821  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  53011822 cagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 53011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 19661295 - 19661544
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  19661295 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 19661393  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||| |||||||||||| |    
T  19661394 acttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatcctttttttctttgcataaaccattcgttttaccc-ttttccacaacaaa 19661492  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  19661493 ggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 19661544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 28463737 - 28463487
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| |||| |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  28463737 ttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtataatc 28463638  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||| |||||||||| |||    
T  28463637 acttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccattcgttttgccc-ttttccacaataga 28463539  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  28463538 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 28463487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 32130942 - 32130689
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||| ||||||  ||||| ||||||| |||||| | ||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  32130942 atcattttctttctttagtacccgtttgagttttt-tctagacactagttcttctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 32130844  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  32130843 aatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 32130745  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| ||||  ||||||||||||||  ||||| |||||    
T  32130744 cagaggagtgacaaattcaaacgacacaattagataaatttcatctctttcactta 32130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 36 - 280
Target Start/End: Original strand, 41038170 - 41038415
Alignment:
Q  36 ttcttcagtacacgtttgtatttttgtctagactctagttttcctttta-gtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 134  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||  ||||  |||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  41038170 ttctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcctatcaaatcacccctaatttgtataatcactta 41038269  T
Q  135 attactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagt 234  Q
    || | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||    
T  41038270 atcagtcaatttggaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagt 41038368  T
Q  235 gac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  41038369 gacaaatccaaacgacaccgttagataaatttcacctctttcactta 41038415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 44477949 - 44478205
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||| |||||| ||||||||||||  ||||| |||| ||| |||||| || |||| ||||||||||| |||||||||||||||||| |||||||||    
T  44477949 atcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatcctatcaaaccacccataatttgta 44478048  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||| ||||||||    
T  44478049 taatcactaaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaactattcgttttaccc-ttttccac 44478147  T
Q  224 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  44478148 aacagaggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 44478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 11681892 - 11681641
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagt-acataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| |||||||  | ||||||||| |||||||||||||||||| |||||| ||||||    
T  11681892 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11681793  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||    
T  11681792 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttaccc-ttttccacaacag 11681694  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  11681693 atgagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 11681641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 11690171 - 11689920
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagt-acataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| |||||||  | ||||||||| |||||||||||||||||| |||||| ||||||    
T  11690171 ttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccacccctaatttttataat 11690072  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||    
T  11690071 cacttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttaccc-ttttccacaacag 11689973  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  11689972 atgagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 11689920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 29221770 - 29221520
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||| | ||||||||  ||||| ||||||||||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  29221770 ttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgatcctatcaaaccactcttaatttgtataatc 29221671  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||    |||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  29221670 acttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacaga 29221572  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| |||  |||| |||| ||| ||| |||||||| ||||| |||||    
T  29221571 ggagtgacaaatttaaacgacaccgttggattaatttcacctctttcactta 29221520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 23256511 - 23256758
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||| ||||  ||||| | ||||||| |||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||| |    
T  23256511 ttttctttctt-agtacacatttgagttttttt-tagactccagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataacc 23256608  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||    
T  23256609 acttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatcattttt-tcttcccataaaccattcgttttaccc-ttttccacaacaga 23256706  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| | |||||||||||||| | |||||||||    
T  23256707 ggagtgacaaattcaaacgacaccggtagataaatttcacctattttactta 23256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 62 - 280
Target Start/End: Original strand, 29579827 - 29580045
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 161  Q
    |||||||||||||| |  |||| |||||||||||||||||||||||||||||| ||||||||||||| | ||||| | |||| ||| ||||||||||||     
T  29579827 tctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaa 29579926  T
Q  162 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagata 260  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||||| || |||||||||||||||||||||| ||| ||||  | || ||||||||    
T  29579927 tgaaagaatcacaacaatcatttttttcttcgcataaacaattcgtttta-ccattttccacaacagagtagtgacaaatccaaatgataccgttagata 29580025  T
Q  261 aatttcacatcttttactta 280  Q
    |||||||| ||||| |||||    
T  29580026 aatttcacctctttcactta 29580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 16072505 - 16072763
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||||||||||| |||||||||||  ||||| ||||  |||||| | ||||||| |||||||||| |||||||||||||||| || ||||||||||    
T  16072505 atcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaatttgtat 16072604  T
Q  126 aatcacttaattactcaatttggaaagctatttcatt----gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 221  Q
    ||||| ||||| | |||||||| ||| |||||||| |    |||||||||||||||||||||||| ||||||||||||  ||| ||||||||| ||||||    
T  16072605 aatcatttaatcagtcaatttgaaaaactatttcaatgaaagaaagaatcacaacaatcatttttttcttcgcataaactatttgttttaccc-ttttcc 16072703  T
Q  222 acaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||||| |||||| ||  ||||  |||  |||||||||||||||| ||||| |||||    
T  16072704 acaacagaggagtgacaaacccaaatgacatcgttagataaatttcacctctttcactta 16072763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 21791695 - 21791461
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||| |||||||| |||||  ||||| |||||||||||||| ||||||  | |||||||| |||| | ||||||||||| | ||| |||||||||    
T  21791695 ttttctttcatcagtacatgtttgagttttt-tctagactctagttctcctttctgaacataaatttgatgccatcaaaccaccttcaatgtgtataatc 21791597  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||| |||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| ||||  ||| ||| |||| ||  |    
T  21791596 acttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttct-ttttcgcataaaccatttgttt--cccctttcccacgacgaa 21791500  T
Q  230 gtagtgacaatgcaaaccacactgttagataaatttcac 268  Q
      ||||||||| ||||| ||| |||||| ||||||||||    
T  21791499 tgagtgacaatccaaacgacattgttaggtaaatttcac 21791461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 35654102 - 35653943
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| | ||||  | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||||||||    
T  35654102 ttttttctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctat 35654003  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||||||||||||||||||| |||| | | ||||||||||  ||||||||| ||||||    
T  35654002 ttcattgaaagaatcacaacaattatttct-ttttcgcataaactattcgtttttcccttt 35653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 280
Target Start/End: Original strand, 5545301 - 5545493
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| |||| | |||||||||||   ||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  5545301 acataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcattaaaagaatcacaacaatcatttat 5545400  T
Q  187 ctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
     | |||||||||| |||||||||| ||| || | |||||| ||| |||||| ||| ||||| |||| ||||| |||||||||| ||||| |||||    
T  5545401 -ttttcgcataaaccattcgttttcccccttct-cacaacggaggagtgacaaattcaaacgacaccgttaggtaaatttcacgtctttcactta 5545493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 43154936 - 43154758
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| || |||||| ||  ||||| |||||| ||||||| | ||||| | |||||||| |||| ||||||||||||| | |||||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttt-tctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatc 43154838  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||||| | |||||||  |||| ||||||||| |||||||||||||||| |||| | | |||||||||||||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaattatttat-ttttcgcataaatcattcgtttt 43154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 10575615 - 10575486
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| | || ||||||||||||||| || ||||||||||||||||| | ||||||| ||||| ||||||||||||| ||||||||||||||||| |    
T  10575615 acataaattttatgctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatcatttct 10575516  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | |||||||||| |||||||||| ||||||    
T  10575515 -ttttcgcataaaccattcgttttccccttt 10575486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 45172736 - 45172640
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||    
T  45172736 acataaatctggtactatcaaaccaccct-aatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcattt 45172640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 21168972 - 21169088
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||  |||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  21168972 ttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataatc 21169071  T
Q  130 acttaattactcaattt 146  Q
    | ||||| | |||||||    
T  21169072 aattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 268
Target Start/End: Original strand, 22423626 - 22423837
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| | ||||  | |||||||| |||| ||||||||||||| | ||||||||| |||||||||| | |||||||| ||| ||||    
T  22423626 ttttttctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatcacttaatcaatcaatttgaaaaactat 22423725  T
Q  157 ttcattgaaagaatcacaacaatcattt-ttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgtt 255  Q
    || ||||||||||||| |||||| |||| || | | | |||||||||||||||||  || |||   || ||| || ||||||| | ||||| |||| |||    
T  22423726 tttattgaaagaatcaaaacaattatttattttttccacataaatcattcgtttt-tccatttcatacgacataggagtgacattccaaacgacaccgtt 22423824  T
Q  256 agataaatttcac 268  Q
    |||||||||||||    
T  22423825 agataaatttcac 22423837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 55134180 - 55134303
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| ||||||||||||| |||||||||||||||||||||| |    
T  55134180 acataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttct 55134279  T
Q  187 ctcttcgcataaatcattcgtttt 210  Q
     | ||  |||||||||||||||||    
T  55134280 ttttttacataaatcattcgtttt 55134303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 34982154 - 34982325
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||||| || |  | ||||||||||| | ||| ||||||| ||  |||||||||||||||||||| | ||||    
T  34982154 tacacgtttgagttttt-tctagactttagtttttctatctggacataaatctggtactaacaaaccatccccaatttgtataatcacttaatcagtcaa 34982252  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    || | ||| ||||||| ||||||||||||||||||| |||| | | |||  |||||||||| ||||| ||||||    
T  34982253 ttggaaaaactatttcgttgaaagaatcacaacaattatttct-ttttcatataaatcatttgttttccccttt 34982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 24449040 - 24449195
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccctt--aatttgtataa 127  Q
    ||||||||||||||||||||| ||  ||||| |||||||||||||| | ||||  | | |||||| |||| ||||||||||||  |   |||||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 24449138  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||||   |||||||| ||| ||||||| | ||||||| ||||||||| ||||    
T  24449139 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattattt 24449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 26329178 - 26329026
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||  ||||||||||| |||||| |||||||| || || ||||||  | ||||||||||||| ||| |||||||||   ||||| |||||||    
T  26329178 ttttctttctttggtacacgtttgaattttt-tctagactgtaattctccttt--ggacataaatctgatgctaccaaaccacctccaatttatataatc 26329082  T
Q  130 acttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 184  Q
    | | ||| | ||||||| |||||||  ||| ||  ||||||||||||| |||||||    
T  26329081 attcaatcagtcaatttagaaagctgcttcaataaaaagaatcacaacgatcattt 26329026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 280
Target Start/End: Complemental strand, 51066449 - 51066324
Alignment:
Q  154 tatttcattgaaagaatcacaacaatcatttttctctt-cgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacac 251  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| |||| ||||| ||   || ||| |||  || |||||| ||| ||||  ||||    
T  51066449 tatttcattgaaagaatcacaacaatcattttttttttccgcataaaccatttgttttccc---ttcccaaaacgaaggagtgacaaatccaaatgacac 51066353  T
Q  252 tgttagataaatttcacatcttttactta 280  Q
    |||||| |||||||||| ||||| |||||    
T  51066352 tgttaggtaaatttcacctctttcactta 51066324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 16887947 - 16887882
Alignment:
Q  216 ttttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||||||||||  |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  16887947 ttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 16887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 51066703 - 51066667
Alignment:
Q  140 tcaatttggaaagctatttcattgaaagaatcacaac 176  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  51066703 tcaatttagaaagcaatttcattgaaagaatcacaac 51066667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 1e-82; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 26 - 268
Target Start/End: Original strand, 13585210 - 13585452
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  13585210 atcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcctatcaaaccacccctaatttgtat 13585309  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  13585310 aatcaattaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 13585408  T
Q  226 cagagtagtgacaa-tgcaaaccacactgttagataaatttcac 268  Q
    ||||| |||||||| | ||||| || | ||||||||||||||||    
T  13585409 cagaggagtgacaagtccaaacgacgccgttagataaatttcac 13585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 268
Target Start/End: Complemental strand, 18420762 - 18420520
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| || ||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  18420762 atcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcagatcctatcaaaccacacttaatttgtat 18420663  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||    
T  18420662 aatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta-ccttttttcacaa 18420564  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    ||||| |||||| ||| ||||| |||| ||||||||||||||||    
T  18420563 cagaggagtgacaaatccaaacgacaccgttagataaatttcac 18420520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 43968219 - 43967969
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||    
T  43968219 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccactcctaatttgtataatc 43968120  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||    
T  43968119 acttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttactc-ttttccacaacaga 43968021  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||   ||||||||||||||| ||||| |||||    
T  43968020 ggagtgacaaatccaaacgacatccttagataaatttcacctctttcactta 43967969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 26 - 279
Target Start/End: Original strand, 7857996 - 7858249
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| | ||||||||| |||||||||||| ||||| ||||||||||    
T  7857996 atcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaatcacccctaatttgtat 7858095  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  7858096 aatcacttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 7858194  T
Q  226 cagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactt 279  Q
    ||||| |||| | ||| ||||  |||| |||||||||||||||| ||||| ||||    
T  7858195 cagaggagtgaaaaatccaaatgacaccgttagataaatttcacctctttcactt 7858249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 26 - 268
Target Start/End: Original strand, 3471506 - 3471753
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-----ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatt 120  Q
    ||||||||||||||||||||||| ||||  ||||| |     ||||| ||||||| || |||| |||||||||| |||| |||||||||||||| |||||    
T  3471506 atcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgtgattctatcaaaccacccctaatt 3471605  T
Q  121 tgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 220  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||| |||||    
T  3471606 tgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcatgaaccattcattttaccc-ttttc 3471704  T
Q  221 cacaacagagtagtgaca-atgcaaaccacactgttagataaatttcac 268  Q
    |||||||||| ||||| | || ||||| |||| ||||||||||||||||    
T  3471705 cacaacagaggagtgatagatccaaacgacaccgttagataaatttcac 3471753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 56 - 274
Target Start/End: Complemental strand, 43926446 - 43926228
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||||||||||||| | ||||| ||| ||||||| |||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||    
T  43926446 tttttttctagactctagttctactttttgtatataaatcggatcctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagcta 43926347  T
Q  156 tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgt 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||| |||| |||||| ||| ||||| |||| ||    
T  43926346 tttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgctttaccc-ttttccacaatagaggagtgacaaatccaaacgacaccgt 43926248  T
Q  255 tagataaatttcacatcttt 274  Q
    || ||||||||||| |||||    
T  43926247 tacataaatttcacctcttt 43926228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 64 - 268
Target Start/End: Complemental strand, 44665161 - 44664957
Alignment:
Q  64 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 163  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||  |||||||||| |||||||||| | || |||||||||| ||||||||||    
T  44665161 tagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattg 44665062  T
Q  164 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 262  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||||| ||| ||||| | ||  |||||||||    
T  44665061 aaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagtgacaaatccaaacgataccattagataaa 44664963  T
Q  263 tttcac 268  Q
    ||||||    
T  44664962 tttcac 44664957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 62 - 280
Target Start/End: Original strand, 18112063 - 18112282
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 161  Q
    |||||| ||||||| || |||  ||||||||||| |||| ||||||||||| | ||||||||||||||||||||| | |||||||||||| |||||| ||    
T  18112063 tctagaatctagttctcttttatgtacataaatcggatcatatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaaactattttat 18112162  T
Q  162 tgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 259  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||| |||| |||||| ||| ||||| |||| |||||||    
T  18112163 tgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaatagaggagtgacaaatccaaacgacaccgttagat 18112261  T
Q  260 aaatttcacatcttttactta 280  Q
    |||||| || ||||| |||||    
T  18112262 aaatttaacctctttcactta 18112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 32098326 - 32098090
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||| ||||||| | |||||||| |||| |||||||||||| |||||||||||| |||    
T  32098326 ttttctttcttcagtacacgtttgagttttt-tctagactctagttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatc 32098228  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||| |||| | | || ||||||| |||||||||| |||  || ||||||||||    
T  32098227 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaattatttct-tttttgcataaaccattcgtttt-ccccattcccacaacaga 32098130  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    | |||||| ||| ||||| |||| ||||  ||||||||||    
T  32098129 ggagtgacgaatccaaacgacaccgttacgtaaatttcac 32098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 27074526 - 27074688
Alignment:
Q  67 actctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaa 166  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||  ||  ||||||||||||||    
T  27074526 actctagtactcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaa 27074625  T
Q  167 gaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 230  Q
     ||||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||    
T  27074626 aaatcacaacaatcatttttttcttcgcataaaccatttgtttta-cctttttccacaacagag 27074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 42951926 - 42951726
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt----ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaattt 121  Q
    ||||||||||||||| ||||||||||||  ||||| |    ||||||||||||| || |||| |||||||||||  ||||||||||||||| | ||||||    
T  42951926 atcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatcctatcaaaccactcctaattt 42951827  T
Q  122 gtataatcacttaattactcaatttggaaagctatttcattgaaagaat----cacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||||||||||| | |||||||| |||| ||||| |||||||||||    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  42951826 gtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcacacacaacaatcatttttttcttcgcataaaccattcgttttacccttt 42951727  T
Q  218 t 218  Q
    |    
T  42951726 t 42951726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 116 - 280
Target Start/End: Original strand, 1004059 - 1004222
Alignment:
Q  116 taatttgtataatcacttaattactcaatttggaaagct-atttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttacc 213  Q
    ||||||||||||||||||||| | |||||||| |||  | ||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||    
T  1004059 taatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgttttacc 1004158  T
Q  214 ctttttccacaacagagtagtgacaatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | ||||||||||||||| ||||||||  ||||| |||| |||||||||||||||| ||||| |||||    
T  1004159 c-ttttccacaacagaggagtgacaa--caaacgacaccgttagataaatttcacctctttcactta 1004222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 34524085 - 34523914
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  34524085 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 34523987  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||| |||||||||||||||||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  34523986 tttgaaaagctatttcattgaaagaatcacaacaatcatttct-ttttcatataaaccattcgttttccccttt 34523914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 3628889 - 3628717
Alignment:
Q  36 ttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaa 135  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | | ||  |  ||||||| |||| ||||||||||||| ||||||||||||||||| |||    
T  3628889 ttcttcagtacacgtatgagttttt-tctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataa 3628791  T
Q  136 ttactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    | | |||||||| |||| |||||||||||||||||||||||||| |||| | | |||||||||| ||||||||||    
T  3628790 tcagtcaatttgaaaagttatttcattgaaagaatcacaacaattatttct-ttttcgcataaaccattcgtttt 3628717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 5869468 - 5869315
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| ||||||||||| |||  ||||| | |||||| ||||| ||||||  |||||||||| |||| |||||||||||||   ||||| || ||||    
T  5869468 ttttctttattcagtacacgattgagttttttt-tagactttagttctcctttctgtacataaat-tgatactatcaaaccaccac-aatttttaaaatc 5869372  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  5869371 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttt 5869315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 23567366 - 23567244
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||||||||||| |||| |    
T  23567366 acataaatctgctactatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaatgatttct 23567267  T
Q  187 ctcttcgcataaatcattcgtttt 210  Q
     | ||| |||||| ||||||||||    
T  23567266 -ttttcacataaaccattcgtttt 23567244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 12531489 - 12531660
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||  | ||||||||| |||   |||||||||||||||||||| | ||||    
T  12531489 tacacgtttgagttttt-tctagactttagttctcctatccgaacataaatcttgtactatcaaactacctccaatttgtataatcacttaatcagtcaa 12531587  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||  ||| |||||||||||||||||||||||||||||||| | | ||| |||||| |||| ||||| ||||||    
T  12531588 tttaaaaatctatttcattgaaagaatcacaacaatcatttct-ttttcacataaaccatttgttttccccttt 12531660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 39698029 - 39697933
Alignment:
Q  88 cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||| || | |||||||||||||   ||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  39698029 cataaatttggtactatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaattattt 39697933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 36515182 - 36515069
Alignment:
Q  153 ctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacact 252  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||| ||| | || ||  || ||||||| | ||||| ||||     
T  36515182 ctatttcattgaaagaatcacaacaattatttttttcttcgcataaatcatttgtttt-cccatttcctacgacgtaggagtgacattccaaacgacacc 36515084  T
Q  253 gttagataaatttca 267  Q
    |||||||||||||||    
T  36515083 gttagataaatttca 36515069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 270
Target Start/End: Original strand, 29372343 - 29372510
Alignment:
Q  101 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaat 200  Q
    ||||||||| ||||  |||||||||||||| ||||| | ||||||||||||| ||||  ||||||||||| ||||||||||||| | | ||||||||||     
T  29372343 ctatcaaactacccacaatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcatttattt-ttcgcataaac 29372441  T
Q  201 cattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgttagataaatttcacat 270  Q
    ||||| |||| ||||||  |||| |   || ||||||||| ||||| ||||  |||| ||||||||||||    
T  29372442 cattcattttcccctttg-ccacgatgaaggagtgacaatccaaacgacaccattaggtaaatttcacat 29372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 30915439 - 30915258
Alignment:
Q  30 ttttctttcttcagtacacgttt--gtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    |||||||||||| ||| || |||  || ||||| | ||||||||| || ||||||  | ||||| ||||||| ||| |||||| ||   ||| |||||||    
T  30915439 ttttctttcttcggtatacatttaagtttttttttttagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataa 30915340  T
Q  128 tcacttaattactcaatttggaaagctatttcatt-gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttt 209  Q
    ||||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||| | | ||||||||||| ||| ||||    
T  30915339 tcacttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatcatttct-ttttcgcataaataatttgttt 30915258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 35874840 - 35874995
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccctt--aatttgtataa 127  Q
    ||||||||||||||||||||| ||  ||||| |||||||||||||| | ||||  | | |||||| |||| ||||||||||||  |   |||||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 35874938  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||||   |||||||| ||| ||||||| | ||||||| ||||||||| ||||    
T  35874939 tcacttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattattt 35874995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 33452709 - 33452885
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| ||||  |||||  ||||| ||||||||||| || || |||  | |||||||||| ||  ||||||||||||   ||||| |||||||    
T  33452709 ttttctttcttcggtaccagtttgagttttt-tctagactctaattctctttt--ggacataaatcttatggtatcaaaccacctccaatttatataatc 33452805  T
Q  130 acttaattactcaatttggaaagcta-tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttt 209  Q
    ||| ||||| |||||||| |||| || ||| ||  ||||||||||||||||||||| | | ||||||||||||||| ||||    
T  33452806 actcaattaatcaatttgaaaagttattttaataaaaagaatcacaacaatcatttct-ttttcgcataaatcatttgttt 33452885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 42777763 - 42777867
Alignment:
Q  133 taattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagta 232  Q
    |||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||| | | |||||| | |||||||||| | | ||| ||||||| ||| |    
T  42777763 taattagtcaatttagaaagctatttaattaaaagaatcacaacaatcattttt-tttccgcatataccattcgtttt-ctcatttcccacaacggagga 42777860  T
Q  233 gtgacaa 239  Q
    |||||||    
T  42777861 gtgacaa 42777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 3445597 - 3445661
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatc 95  Q
    ||||||||||| |||||||||||| |||||| | |||||||||||| ||||||| |||||||||||    
T  3445597 ttttctttctttagtacacgtttgaattttttt-tagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 42076110 - 42076212
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatt-tttctcttcgcataaatcattcgttttaccct 215  Q
    |||||||||||| ||||||| | |||||||| ||||||||  |||||||||||||| || ||| ||| ||| | | ||||||||  ||||||||| ||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatcataataataattatttttttccgcataaactattcgttttcccct 42076209  T
Q  216 ttt 218  Q
    |||    
T  42076210 ttt 42076212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 57599 - 57853
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||||||||||| |||||||||||  ||||| | || ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  57599 atcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgtat 57698  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  57699 aatcacttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 57797  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
     |||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  57798 tagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 57853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 3515003 - 3514749
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  3515003 atcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtat 3514904  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    |||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  3514903 aatcacgtaatcattcaatttggaaagctatatcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 3514805  T
Q  226 cagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||| | ||| ||||| ||||  ||||||||||||||| ||||| |||||    
T  3514804 cagaggagtgaaaaatccaaacgacaccattagataaatttcacctctttcactta 3514749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 2618267 - 2618520
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  2618267 atcattttctttctttagtacacgtttgagttttt-tctagactttagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtat 2618365  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  2618366 aatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 2618464  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  2618465 cagaggagtgacaaatccaaacgacaccgttggataaatttcacctctttcactta 2618520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 6360672 - 6360924
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||    
T  6360672 atcattttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgcacataaatcggatcctatcaaaccacccttaatttgtat 6360770  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||    
T  6360771 aatcacttaatcagtcaatttgaaaagtta-ttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccc-ttttccacaa 6360868  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  6360869 cagaggagtgacaaattcaaacgacaccgttagataaatttcatctctttcactta 6360924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 6754118 - 6754371
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||| ||||||| || |||| ||||||||||| ||||||||||||||| || ||||||||||    
T  6754118 atcattttctttctttagtacgcgtttgagttttt-tctagattctagttctcttttttgtacataaatcggatcctatcaaaccatccctaatttgtat 6754216  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  6754217 agtcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 6754315  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||  |||| |||  ||||||||||| ||||| |||||    
T  6754316 cagaggagtgacaaatccaaatgacaccgttgaataaatttcacctctttcactta 6754371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 29149316 - 29149526
Alignment:
Q  31 tttctttcttcagtacacgtttg---tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    |||||||||| ||||||||||||   | ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 29149514  T
Q  228 gagtagtgacaa 239  Q
    ||| ||||||||    
T  29149515 gaggagtgacaa 29149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 7525315 - 7525078
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| |||||| ||||||||||||  ||||| |||||||||||||| ||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  7525315 ttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaaccacccataatttgtataatc 7525216  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||  |||  |||||||| ||||||||||||||    
T  7525215 acttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcatttttttcttcgcataaacaatttattttaccc-ttttccacaacaga 7525117  T
Q  230 gtagtgacaatgcaaaccacactgttagataaatttcac 268  Q
    | ||||||||  | ||  |||| ||||||||||||||||    
T  7525116 ggagtgacaaatccaaagacaccgttagataaatttcac 7525078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 42 - 280
Target Start/End: Complemental strand, 12614852 - 12614617
Alignment:
Q  42 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 141  Q
    ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||    
T  12614852 agtacacgtttgagttttttt-tagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtc 12614754  T
Q  142 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 240  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||| ||| || |||    
T  12614753 aatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttaccc-ttttccacaacagaggagtaacaaat 12614655  T
Q  241 gcaaaccacactgttagataaatttcacatcttttactta 280  Q
     |||||   || |||||||||||||||| ||||| |||||    
T  12614654 tcaaac--gaccgttagataaatttcacctctttcactta 12614617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 29401051 - 29401263
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| ||| ||||||||||||| |||| |||||||||||  |||||||||||| |||| ||||| ||||    
T  29401051 atcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatcctatcaaactacccctaattagtat 29401150  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||||| |    
T  29401151 aatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtcttaccc-ttttccacga 29401249  T
Q  226 cagagtagtgacaa 239  Q
    ||||| ||||||||    
T  29401250 cagaggagtgacaa 29401263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 32 - 268
Target Start/End: Complemental strand, 628243 - 628007
Alignment:
Q  32 ttctttcttcagtacacgtttgtattt-ttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatca 130  Q
    ||||||||| |||||| |||||  ||| || ||||||||||||||  |||||| ||||| ||||| |||| ||||||||||||| |||||||||||||||    
T  628243 ttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaatttgtataatca 628144  T
Q  131 cttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 230  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  || |||||||||||||||    
T  628143 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt--cccttttccacaacagag 628046  T
Q  231 tagtga-caatgcaaaccacactgttagataaatttcac 268  Q
     |||||  ||| ||||| |||  ||||||||||||||||    
T  628045 aagtgataaatccaaacgacatcgttagataaatttcac 628007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 273
Target Start/End: Original strand, 22503728 - 22503901
Alignment:
Q  97 gatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcat 196  Q
    |||||||||||||||| | |||||   ||||||||||||| | |||||||| ||| ||||||| |||||||||| | ||||||||||||| |||||| ||    
T  22503728 gatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcatttttttcttcgtat 22503824  T
Q  197 aaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatctt 273  Q
    ||| ||||| |||||||| ||||||||||||||| |||||| ||| ||||  |||| |||||||||||||||| ||||    
T  22503825 aaaccattcattttaccc-ttttccacaacagagaagtgacaaattcaaatgacaccgttagataaatttcacctctt 22503901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 3748683 - 3748563
Alignment:
Q  64 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 163  Q
    |||| ||||||| | ||||| | |||||||| |||| |||||||||| || | |||||||||||||||||||| | |||||||| |||||||||||||||    
T  3748683 tagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 3748584  T
Q  164 aaagaatcacaacaatcattt 184  Q
    |||||||||||||||| ||||    
T  3748583 aaagaatcacaacaattattt 3748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 30915489 - 30915361
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||||||||||||| | ||||  | |||||||| |||| |||||||||| || | |||||||||||| ||||||| | |||||||| |||||||    
T  30915489 tttttttctagactctagttctactttctggacataaatttgatgctatcaaacccccatcaatttgtataattacttaatcagtcaatttgaaaagcta 30915390  T
Q  156 tttcattgaaagaatcacaacaatcattt 184  Q
    ||| |||||||||||||||||||||||||    
T  30915389 tttaattgaaagaatcacaacaatcattt 30915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 1690725 - 1690628
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||||| | |||||||||||||   ||||||||||||||||| || | |||||||| |||  |||||||||||||||||||||||||||||||    
T  1690725 acataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaatcacaacaatcattt 1690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 14893507 - 14893412
Alignment:
Q  89 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||||| ||||||||| || || |||||||||||| ||||||| | |||||||| ||| ||||||| || |||||||||||||||||||||    
T  14893507 ataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatcattt 14893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 31860989 - 31861067
Alignment:
Q  102 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 181  Q
    |||||||||||||  |||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  31860989 tatcaaaccacccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 31861067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 19231529 - 19231681
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| ||||||||| |||||||||  ||||| |||||| | ||||| | ||||  | ||||||||||| | ||||||||| ||| | |||||||||| ||    
T  19231529 ttttttttcttcaggacacgtttgagttttt-tctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||| | |||||||| ||||||||  |||||||| |||||||||||||||||    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatcattt 19231681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 350386 - 350484
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 184  Q
    |||||||| |||| ||||||||||||| | ||||| |||||||||| ||| | ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  350386 acataaatatgatgctatcaaaccaccatcaatttatataatcactcaatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaatcattt 350484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 29308559 - 29308430
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| ||| |||||||||||||  ||||||||||||||||| |    
T  29308559 acataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatcatttct 29308460  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| ||||||||||||||||| ||||||    
T  29308459 -ttttcacataaatcattcgttttccccttt 29308430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 6294279 - 6294405
Alignment:
Q  140 tcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa 239  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| | | ||||||||||  ||||||||| ||| ||| |||| ||  || |||||||     
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttct-ttttcgcataaactattcgtttt-cccctttcccacgacgtaggagtgacat 6294376  T
Q  240 tgcaaaccacactgttagataaatttcac 268  Q
    | ||||| |||| ||||| ||||||||||    
T  6294377 tccaaacgacaccgttaggtaaatttcac 6294405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 24455146 - 24455218
Alignment:
Q  42 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccaccc 114  Q
    |||||||||||| |||||| |||||||||||||| |||||||  || ||||||| ||||||||||||||||||    
T  24455146 agtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaaccaccc 24455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 21946109 - 21946201
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    |||||||||||||||||||| | || ||||| ||||||||||||||||||||| || |||||| |||| | | ||||||||||  |||||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaaccataacaattatttct-ttttcgcataaacaattcgtttt 21946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 1093162 - 1093004
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||| ||||| |||| |  | |||||||| || | ||||||||||||    |||| ||||||| ||| ||| | |||||||  ||||||||    
T  1093162 ttttttctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgactaaatcagtcaatttaaaaagctat 1093063  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||| |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  1093062 ttcat-gaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 1093004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 11088472 - 11088616
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| ||| |||||||||||  ||||| ||||||||||| || ||||||  | ||||||||||||| ||| ||||||||||  ||||| |||||||    
T  11088472 ttttcttttttcggtacacgtttgagttttt-tctagactctaattctccttt--ggacataaatctgatgctaccaaaccacccccaatttatataatc 11088568  T
Q  130 acttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcattt 184  Q
            | |||||||| ||||||||||| ||  |||||||||||||||||||||    
T  11088569 --------agtcaatttgaaaagctatttcaataaaaagaatcacaacaatcattt 11088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 31258536 - 31258471
Alignment:
Q  216 ttttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||||||||||| |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  31258536 ttttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 31258471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 31234899 - 31234956
Alignment:
Q  101 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttca 160  Q
    ||||||||||| ||  |||||||||||||||||||| | |||||||| ||||||||||||    
T  31234899 ctatcaaaccatcc--aatttgtataatcacttaatcaatcaatttgaaaagctatttca 31234956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 31258606 - 31258543
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaat 94  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||| || ||||||| ||||||||||    
T  31258606 ttttctttctttagtacacgtttgagttttt-tctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 48722521 - 48722269
Alignment:
Q  30 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||| || || |||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  48722521 ttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtataa 48722422  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  48722421 tcacttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 48722323  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||| |||||||||||    
T  48722322 gaggagtgacaaatccaaacgacaccgttagataaatttcacctcttttactta 48722269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 30899570 - 30899823
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| |||||||||||||    
T  30899570 ttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcggatcctatcaaatcacccctaatttgtataat 30899669  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca--tttttctcttcgcataaatcattcgttttaccctttttccacaac 226  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||||||||    
T  30899670 cacttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttttcttcgcataaaccattcgttttaccc-ttttccacaac 30899768  T
Q  227 agagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||| | |||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  30899769 agaggaatgacaaatccaaacgacaccgttagataaatttcacctctttcactta 30899823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 12884290 - 12884099
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  12884290 atcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 12884191  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttt 218  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12884190 aatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcattttt-tcttcgcataaaccattcgttttaccctttt 12884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 6150636 - 6150875
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||  || |||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||||||    
T  6150636 ttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttatataatc 6150735  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    | ||||| | |||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||| |||||||||||||||    
T  6150736 atttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcaattttttcttcacataaaccattcgttttaccttttttccacaacaga 6150835  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    | |||||| ||| ||||| |||| ||||||||||||||||    
T  6150836 ggagtgacaaatccaaacgacaccgttagataaatttcac 6150875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 14084853 - 14084605
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||  |||||    
T  14084853 atcattttctttcttcagtacaggtttgaattttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaaaatgtat 14084755  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc-atttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||| || ||||||    
T  14084754 aatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatcaatttttttcttcgcataaaccattcgttttaccc-ttctccaca 14084656  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttt 274  Q
    |||||| |||||| ||| ||||| ||||  ||||||||||||||| |||||    
T  14084655 acagaggagtgacaaatccaaacgacaccattagataaatttcacctcttt 14084605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 10109630 - 10109885
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||||||| || | ||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||  |||||||||||||||||  |||||||||    
T  10109630 atcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatcaaaccaccactaatttgta 10109729  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||    
T  10109730 taatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatcatttttttcttcgcataaactattcgttttaccc-ttttccaca 10109828  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||| |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  10109829 acagaggagtgacaaatccaaacgacgccgttagataaatttcacctctttcactta 10109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 20905437 - 20905197
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttt-tgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  |||| | |||||||||||||| ||||||| |||||||||||| |||||||||||||| || |||||||||||||    
T  20905437 ttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcctatcaaaccagccctaatttgtataat 20905338  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||| | | |||||||||||  ||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  20905337 cacttattcagtcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgtataaaccattcgttttaccctttttccacaacag 20905238  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    || |||||| ||| ||||| |||| ||| ||||||||||||    
T  20905237 aggagtgacaaatccaaacgacaccgttggataaatttcac 20905197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 29208247 - 29207997
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| || |||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  29208247 ttttctttcttcggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatc 29208148  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    | ||||| | ||||| |||||  |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||    
T  29208147 atttaatcagtcaatctggaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaataga 29208049  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||  |||| ||| |||||||||||  |||||||||||    
T  29208048 ggagtgacaaatccaaatgacaccgttggataaatttcatctcttttactta 29207997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 50552406 - 50552660
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  50552406 atcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 50552505  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    |||||||||||   |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||||||||||    
T  50552506 aatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcatttta-cctttttccacaa 50552604  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || || |||||| ||| ||||| ||||  ||||||||||||||  ||||| |||||    
T  50552605 cataggagtgacaaatccaaacgacaccattagataaatttcatctctttcactta 50552660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 51110254 - 51110000
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||    
T  51110254 atcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcctatcaaaccacccctaatttctat 51110155  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||| |||| |||||| || ||||||||||    
T  51110154 aatcacttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaataagttttttcttcgcataaaccatttgttttatcc-ttttccacaa 51110056  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || || |||||| ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  51110055 caaaggagtgacaaattcaaatgacaccgttagataaatttcacctctttcactta 51110000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 43 - 280
Target Start/End: Complemental strand, 17487419 - 17487182
Alignment:
Q  43 gtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactca 142  Q
    |||||| ||||  ||||| |||||||||||||| |||||||  |||||||||| |||||||||||||||||| |||||| |||||||||||||| | |||    
T  17487419 gtacacatttgagtttttttctagactctagttctcctttttttacataaatcggatcctatcaaaccacccctaatttatataatcacttaataaatca 17487320  T
Q  143 atttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatg 241  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| || ||||||||||||||| |||||| |||     
T  17487319 atttggaaagttatttcattgaaagaatcacaacaatcatttttttctttgcataaaccattcgttttatcc-ttttccacaacagaggagtgacaaatc 17487221  T
Q  242 caaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| || | |||||||||||||||| ||||| |||||    
T  17487220 caaacaacgccgttagataaatttcacctctttcactta 17487182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 18128090 - 18127836
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    ||||||||||||||| ||||||||||||  ||||| | ||||| ||||||| ||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  18128090 atcattttctttctttagtacacgtttgagttttttttctagattctagttctcctttt-gtacgtaaatcggatcctatcaaaccacccataatttgta 18127992  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    |||||||||||| | |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||  ||||||||||||| |||||||||    
T  18127991 taatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaattatttttttcttcgcataaactattcgttttaccc-ttttccaca 18127893  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||| || |||||| ||| ||||| |||| ||||| ||||||| || ||||| |||||    
T  18127892 acaaaggagtgacaaatccaaacgacaccgttaggtaaattttacctctttcactta 18127836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 25930518 - 25930768
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttt-tgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||||||| ||| |||||||||||  |||| |||||||||||||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  25930518 ttttcttttttcggtacacgtttgagttttttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataat 25930617  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | |||| ||| ||||||||||||||||||| |||||||||||||||||| |||| | ||||| |||| ||||||||| |||||||||||||    
T  25930618 cacttaatcagtcaacttgaaaagctatttcattgaaaggatcacaacaatcattttt-tctttggataaaccatttgttttaccc-ttttccacaacag 25930715  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |  |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  25930716 atgagtgacaaatccaaacgacaccgttagataaatttcatctctttcactta 25930768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 88 - 280
Target Start/End: Complemental strand, 28885762 - 28885570
Alignment:
Q  88 cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttc 187  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||     
T  28885762 cataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaatcatttttt 28885663  T
Q  188 tcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||||||||| |||||||||||  ||||||||||||||||  |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  28885662 tcttcgcataaaccattcgtttta-tctttttccacaacagatgagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 28885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 52055462 - 52055716
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtct-agactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||||||||||||||| |||||||  ||||| | | ||||||||||| ||||||| |||||||||||| ||| |||||||| | || |||||| ||    
T  52055462 atcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatcatatcaaactatccataatttata 52055561  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||| |||| ||||    
T  52055562 taatcacttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatcagtttttccttcgcataaaccattcgttttaccc-ttttacaca 52055660  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||| |||||| |||  |||| |||| ||||||||||||| || ||||| |||||    
T  52055661 a-agaggagtgacaaatctaaacgacaccgttagataaattttacctctttcactta 52055716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 27703677 - 27703442
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| | |||||||| |||| ||||||||||||||  |||||||||||||    
T  27703677 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatc 27703579  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||  | |||||||||| |||||||||| ||| |||||||| || ||    
T  27703578 acttaatcagtcaatttggaaagctatttcatcgaaagaatcacaacaatca-tttcattttcgcataaaccattcgtttttccc-ttttccaccacgga 27703481  T
Q  230 gtagtgacaatgcaaaccacactgttagataaatttcac 268  Q
      ||||||||| ||||| |||||||||| ||||||||||    
T  27703480 agagtgacaatccaaacgacactgttaggtaaatttcac 27703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 33124781 - 33124571
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactcta--gttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    ||||||||||| ||||||||||||  ||||| | |||||||||  ||| |||||||  |||||||||| |||||||| ||||||||  ||||||||||||    
T  33124781 ttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggatcctattaaaccacctctaatttgtataa 33124682  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || || ||||||||||||    
T  33124681 tcacttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttata-ccattttccacaaca 33124583  T
Q  228 gagtagtgacaa 239  Q
    ||| ||||||||    
T  33124582 gaggagtgacaa 33124571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 1 - 172
Alignment:
Q  109 ccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtt 208  Q
    |||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  1 ccacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtt 100  T
Q  209 ttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||| ||||| ||||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  101 ttaccc-ttttctacaacagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 30005052 - 30004819
Alignment:
Q  30 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    |||||||| ||| |||||||||||  | ||||| ||||||||||| || ||||||| ||||||||||| |||||||||||||||      ||||||||||    
T  30005052 ttttcttttttcggtacacgtttgagtttttttttctagactctacttctcctttttgtacataaatccgatcctatcaaacca------atttgtataa 30004959  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | | |||||| ||||||||||||||||||||||| |||||||||||| | ||||| |||||| ||||||||||| |||||||||||||||    
T  30004958 tcacttaatcaattaatttgaaaagctatttcattgaaagaatcgcaacaatcatttgt-tcttcccataaaccattcgtttta-cctttttccacaaca 30004861  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    ||| |||||| ||| ||||| | || ||||||||||||||||    
T  30004860 gaggagtgacaaattcaaacgataccgttagataaatttcac 30004819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 50371050 - 50371286
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||| ||| | |||| |||| | |||||||||||||| ||||||  | | |||||  |||| |||||||| |||||| |||||||||||||    
T  50371050 ttttctttcttcaatacgcatttggatttct-tctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatc 50371148  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||| ||| || ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||| ||| ||  ||||||| ||    
T  50371149 acttaatcagtcaatttgaaaaactgtttcattgaaagaatcacaacaatcatttct-ttttcgcataaatcattagtttttccc-ttacccacaacgga 50371246  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    | |||||| ||| ||||| |||  ||||| ||||||||||    
T  50371247 ggagtgacaaatccaaacaacatcgttaggtaaatttcac 50371286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 12971336 - 12971507
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | |||||||||||||  |||||||||||||  |||||||||||||||||||| | ||||    
T  12971336 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctgatattatcaaaccacccccaatttgtataatcacttaatcagtcaa 12971434  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  12971435 tttgaaaagctatttcatcgaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 12971507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 5560399 - 5560606
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||||||||||||||   |||| | |||||| ||||| || |||  | ||||||||||| | ||| ||||||||||  |||||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttt-tagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatc 5560497  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||  |||| ||||||||||||||||||||||||||||| ||| | | ||||||||  |||| |||| | ||||| ||||||| ||    
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatatttttttccgcataaactattcatttt-ctcttttcccacaacgga 5560596  T
Q  230 gtagtgacaa 239  Q
    | ||||||||    
T  5560597 ggagtgacaa 5560606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 6333664 - 6333509
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| |||||||||||  ||||| | |||||||||||| || ||   ||||||||||||||| ||||||||||| ||| ||| |||| ||||    
T  6333664 ttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatcaaaccatcct-aatctgtaaaatc 6333566  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||| | |||| |||||||| ||||| ||| |||||||||||||||||||||||    
T  6333565 acttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatcattttt 6333509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 52240554 - 52240435
Alignment:
Q  161 ttgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 259  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||| || ||| ||| ||||| ||||||||||||    
T  52240554 ttgaaagaatcacaacaatcatttttttcttcgcataaatcattcattttgccc-ttttccacaacagaggagcgacaaattcaaacgacactgttagat 52240456  T
Q  260 aaatttcacatcttttactta 280  Q
    ||||||||| ||||| |||||    
T  52240455 aaatttcacctctttcactta 52240435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 15441206 - 15441441
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||||  ||||||||||  ||||| |||||||||||||| |||||| ||| |||||||| | || |||||||||||||   ||||||||||||    
T  15441206 ttttctttcttcgatacacgtttgagttttt-tctagactctagttctcctttctag-acataaatataatgctatcaaaccacctacaatttgtataat 15441303  T
Q  129 cacttaattactcaatttggaaagctatttcatt-gaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    |||||||| |||||||||  ||||||||||||||  |||||||||||||||| ||| |  | || ||||||||||||| ||||  || ||||||||||||    
T  15441304 cacttaatcactcaatttataaagctatttcattaaaaagaatcacaacaataattct--tttttgcataaatcattcatttt--cccttttccacaaca 15441399  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    ||  |||||| ||| ||||| || | ||||| ||||||||||    
T  15441400 gaagagtgacaaatccaaacgacgccgttaggtaaatttcac 15441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 42740052 - 42740211
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| | ||||  | |||||| | |||| ||||||||| ||| | |||||||||||| ||||||||| |||||||| ||| ||||    
T  42740052 ttttttctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactat 42740151  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||||||||||| ||||||| |||| | | ||||||||||  ||||||||| ||||||    
T  42740152 ttcattgaaagaatcgcaacaattatttct-ttttcgcataaacaattcgttttccccttt 42740211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 37873911 - 37873725
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||| ||||| | |||||||| ||  ||||| |||||||||||||| | |||| ||| |||||||| |||| ||||||||||||| | |||||||||| |    
T  37873911 ttttttttctccggtacacgtatgagtttttttctagactctagttctactttctag-acataaatttgatgctatcaaaccaccatcaatttgtatagt 37873813  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt-ttctcttcgcataaatcattcgttttacccttt 217  Q
    |||||||| | | |||||| ||| || |||||||||||||||||||||||| |||| || |||  ||||||| |||||||||| ||||||    
T  37873812 cacttaatcagttaatttgaaaaactgtttcattgaaagaatcacaacaattatttcttttct--gcataaaccattcgttttccccttt 37873725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 17674444 - 17674317
Alignment:
Q  89 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 188  Q
    |||||| |||| |||| |||||||| | |||||| ||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| |||| | |    
T  17674444 ataaatttgatgctattaaaccaccatcaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttct-t 17674346  T
Q  189 cttcgcataaatcattcgttttacccttt 217  Q
     |||||||||| |||| ||||| ||||||    
T  17674345 tttcgcataaaccatttgttttccccttt 17674317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 217
Target Start/End: Complemental strand, 44836838 - 44836688
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 161  Q
    |||||| ||||||| | ||||  | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||| ||||||||     
T  44836838 tctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcac 44836739  T
Q  162 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||||||||    ||||||| | | |||||||||| |||||||||| ||||||    
T  44836738 tgaaagaatcac----atcatttct-ttttcgcataaaccattcgtttttcccttt 44836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 13120939 - 13120829
Alignment:
Q  106 aaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattc 205  Q
    |||||||| |||||||| ||||||||||||| | |||||||| ||| ||||||||||||||||||||| ||||| |||| | | |||||||||| |||||    
T  13120939 aaaccaccattaatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttct-ttttcgcataaaccattc 13120841  T
Q  206 gttttacccttt 217  Q
     |||| ||||||    
T  13120840 attttccccttt 13120829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 24556778 - 24556900
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| || | |||| |||||||| | |||||| ||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||| |||| |    
T  24556778 acataaatttggtgctattaaaccaccatcaatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaattatttct 24556877  T
Q  187 ctcttcgcataaatcattcgtttt 210  Q
     | |||||||||| ||||||||||    
T  24556878 -ttttcgcataaaccattcgtttt 24556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 1269475 - 1269622
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttt-tagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||||||| ||| |||||||||||  ||||| ||||||||||| || |||||| ||| ||||||||||||| |||| |||||||||  |||||||| |||    
T  1269475 ttttcttttttctgtacacgtttgagttttt-tctagactctaattctcctttctag-acataaatctgatgctatgaaaccacccccaatttgtaaaat 1269572  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
            || |||||||| |||||||||||||| |||||||||||||||||||||||    
T  1269573 --------tagtcaatttgaaaagctatttcattaaaagaatcacaacaatcattttt 1269622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 28189309 - 28189391
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaac 109  Q
    ||||||||||||||||| ||||||||||  ||||| | |||||| ||||| ||||||| |||||||||||||||||||||||||    
T  28189309 atcattttctttcttcaatacacgtttgagttttttt-tagactttagttctcctttttgtacataaatctgatcctatcaaac 28189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 22386929 - 22386799
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| |||| ||||  ||||||| | |||||| | ||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| | | ||    
T  22386929 acataaatttgatgctatttaaccaccatcaatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattaatatt 22386830  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | || ||||||| |||| ||||| ||||||    
T  22386829 ttttttgcataaaccatttgttttccccttt 22386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 9777387 - 9777482
Alignment:
Q  89 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttc-attgaaagaatcacaacaatcatt 183  Q
    ||||||||||| ||| ||||||||||  ||||| |||||||||| ||| | |||||||| | | ||||||| ||  ||||||||||||||||||||    
T  9777387 ataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaataactatttcaataaaaagaatcacaacaatcatt 9777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 20470643 - 20470706
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaat 94  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||| || ||||||| ||||||||||    
T  20470643 ttttctttctttagtacacgtttgagttttt-tctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 20470713 - 20470777
Alignment:
Q  217 tttccacaacagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||||||||||| |||||||| | ||||| |||| |||||||||||||||| ||||| |||||    
T  20470713 tttccacaacagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 20470777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 3907473 - 3907528
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatca 172  Q
    |||||||||||||| ||||| | |||||||| |||  |||||||||||||||||||    
T  3907473 aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 26486513 - 26486343
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| |||||| ||||||||| ||  ||||| |||| ||||||||| | ||||  | | |||||| |||| ||||||||||| | | |||||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttt-tctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatc 26486415  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||        ||| || |||||||||||||||||| ||||| |||||| |||| | | ||||||||||  |||||||||    
T  26486414 actt--------aatctgaaaagctatttcattgaaaaaatcataacaattatttct-ttttcgcataaactattcgtttt 26486343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 31369511 - 31369432
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaat 136  Q
    |||| |||| |||||| || ||||||  | |||||||||||||  |||||||||||  | ||||||||||||||||||||    
T  31369511 ttttttctaaactctaattctcctttctggacataaatctgatgttatcaaaccactttcaatttgtataatcacttaat 31369432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 38263806 - 38263924
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| ||||||||||||||   ||||| | |||||||| |||| |||| |||||||  |  ||||| || || ||||||| | |||||||  ||| ||||    
T  38263806 ttttttctagactctagttccactttttggacataaatttgatgctattaaaccactatcgatttgaattattacttaatcagtcaatttaaaaaactat 38263905  T
Q  157 ttcattgaaagaatcacaa 175  Q
    |||||||| ||||||||||    
T  38263906 ttcattgatagaatcacaa 38263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 3547730 - 3547674
Alignment:
Q  103 atcaaaccacccttaatttgt-ataatcacttaattactcaatttggaaagctattt 158  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||| | ||||||||||    
T  3547730 atcaaaccaccctcaatttgttataatcacttaattggtcaattcgaaaagctattt 3547674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 32810414 - 32810370
Alignment:
Q  116 taatttgtataatcacttaattactcaatttggaaagctatttca 160  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||||    
T  32810414 taatttgaataatcacttaatcaatcaatttgaaaagctatttca 32810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 26151897 - 26151646
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| |||| |||||||  ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  26151897 ttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 26151798  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  26151797 cacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttctacaacag 26151699  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  26151698 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 26151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 19367568 - 19367318
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  19367568 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatcaaaccacccctaatttgtataatc 19367469  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||     
T  19367468 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccattcgttttaccc-ttttccacaacagt 19367370  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  19367369 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 19367318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 25222234 - 25222488
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||| ||  | ||||||||||    
T  25222234 atcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatcattcctaatttgtat 25222333  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  25222334 aatcacttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttt-cacaa 25222432  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| |||| ||||||||||||||||| |||||    
T  25222433 cagaggagtgacaaattcaaacaacaccgttatataaatttcacatctttcactta 25222488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 42411706 - 42411457
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  42411706 ttttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 42411608  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||    
T  42411607 acttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcattttttacttcgcataaaccattcgttttacccttttt-cacaacaga 42411509  T
Q  230 gtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||| | ||| ||||| |||| ||||||||||||| || ||||| |||||    
T  42411508 ggagtgaaaaatccaaacgacaccgttagataaatttaacctctttcactta 42411457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 18676464 - 18676209
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  18676464 atcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaactacccctaatttgtat 18676365  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    ||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||| |||||||||    
T  18676364 aataacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttctttgcataaaccattcgttttaccc-ttttccaca 18676266  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||| |||||| ||| ||||| |||| |||||||||| ||||| ||||| |||||    
T  18676265 aaagaggagtgacaaattcaaacgacaccgttagataaagttcacctctttcactta 18676209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 41096687 - 41096436
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  41096687 ttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccctaatttgtataatc 41096588  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||| |||||||||||||    
T  41096587 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgttttaccc-ttttccacaacag 41096489  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  41096488 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 41096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 7993548 - 7993798
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||||||    
T  7993548 ttttctttctttagtacacatttgagttttt-tctagactctagttctcctttttgtacataaaccggatcctatcaaaccacccctaatttgtataatc 7993646  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc-atttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    ||||||| |  ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||||||| ||    
T  7993647 acttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgttttaccc-ttttccacaatag 7993745  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||||||||| |||||    
T  7993746 aggagtgacaaatccaaacgacaccgttagataaatttcacatctttcactta 7993798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 45618892 - 45619141
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| |||| |||||||  ||||| |||||||| |||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  45618892 ttttctttctttagtatacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 45618990  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||||    
T  45618991 cacttaatcagtcaatttgg-aagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatttgttttaccc-ttttccacaacag 45619088  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  45619089 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 45619141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 2063721 - 2063970
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| ||| |||||||  ||||| | |||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||    
T  2063721 ttttctttcttcggtatacgtttgagttttttt-tagactctagttttcctttttgtacataaatataatcctatcaaaccacccctaatttgtataatc 2063819  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |   |||| ||| ||||||||||| |||||||||||||||||    
T  2063820 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcccgcaaaaaccattcgtttta-cctttttccacaacaga 2063918  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  2063919 ggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 2063970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 13020337 - 13020588
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| || |||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  13020337 ttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtataat 13020436  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  13020437 cacttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaataatttttttcttcgcataaaccattcgtttta-ccttttttcacaacag 13020535  T
Q  229 agtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||| | ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  13020536 aggagtgaaaaattcaaatgacaccgttagataaatttcacctctttcactta 13020588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 280
Target Start/End: Original strand, 4855948 - 4856158
Alignment:
Q  71 tagttttccttttagta-cataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaa 169  Q
    ||||| ||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  4855948 tagttctcctttttgtaacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaa 4856047  T
Q  170 tcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    ||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||| |||||| ||| ||||| ||| |||||||||||||||||    
T  4856048 tcacaacaatcatttttttcttcgcataaaccattcgttttaacc-ttttccacaacagaggagtgacaaatccaaacgacattgttagataaatttcac 4856146  T
Q  269 atcttttactta 280  Q
     ||||| |||||    
T  4856147 ctctttcactta 4856158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 26 - 268
Target Start/End: Original strand, 45042299 - 45042543
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||||||||||||||| |||||||  ||||| | ||||||||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||    
T  45042299 atcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccacccctaatttgta 45042398  T
Q  125 taatcacttaattactcaatttg--gaaag-ctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 221  Q
    |||||||||||| | ||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||| ||||||    
T  45042399 taatcacttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg--ttaccc-ttttcc 45042495  T
Q  222 acaacagagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    ||||||||| |||||| ||| ||||| ||| |||| ||||||||||||    
T  45042496 acaacagaggagtgacaaattcaaacgacattgttggataaatttcac 45042543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 6530574 - 6530824
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| |||| | ||||   ||||| |||||||||||||| || |||| ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  6530574 ttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaaccacccctaatttgtataatc 6530673  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| || | ||||||||||||    
T  6530674 acttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcattattttcttcgcataaaccattcgttttatcc-tattccacaacaga 6530772  T
Q  230 gtagtgaca-atgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | ||||||| || |||||  |||||||||||||||||||  ||||| |||||    
T  6530773 ggagtgacagattcaaacgtcactgttagataaatttcatctctttcactta 6530824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 30 - 218
Target Start/End: Complemental strand, 34062004 - 34061817
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||||||||||| ||  ||||| | |||||| ||||| | ||||| ||||||||||||| |||||||||||||||| |||||||||| ||     
T  34062004 ttttctttcttcagtacacgtatgagttttttt-tagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataatttgtatgatt 34061906  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttt 218  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  34061905 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttaccctttt 34061817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 26 - 264
Target Start/End: Complemental strand, 42759901 - 42759671
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||| ||||||||||||| |||||| |||    
T  42759901 atcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcatatcaaaccacccataatttttat 42759802  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||| |        |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  42759801 aatcagt--------caatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 42759711  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatt 264  Q
     ||||  ||||| ||| ||||| |||| ||||||||||||    
T  42759710 tagaggggtgacaaattcaaacgacaccgttagataaatt 42759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 12269337 - 12269589
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||| |||||| ||||||| |||| |||||| | |||||||||||| || |||| | ||||||||| |||||||||||||||||| ||||||||||    
T  12269337 atcattttttttctttagtacacatttgaattttttt-tagactctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtat 12269435  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |  |||||||||||||||||||| ||| |||||| |||||||||||| ||||| |||||| |||||||||||  |||||||||||     
T  12269436 aatcacttaatcagt-gatttggaaagctatttcattaaaaaaatcaccacaatcatttttttcttcacataaaccattcgtttta-tctttttccacag 12269533  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| | |||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  12269534 cagaggaatgacaaattcaaacgacaccgttagataaatttcacctctttcactta 12269589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 36481317 - 36481559
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||| ||||  ||| | | ||||||||| || ||||||| ||||||||||  |||||| ||||||||||| ||||||||||    
T  36481317 atcattttctttctt-agtacacatttgagtttcttt-tagactctaattctcctttttgtacataaattggatcctttcaaaccacccctaatttgtat 36481414  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    |||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  36481415 aatcacttaat----------ggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcattttaccc-ttttccacaa 36481503  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| | |||||||||||||| ||||| |||||    
T  36481504 cagaggagtgacaaatccaaacgacaccggtagataaatttcacctctttcactta 36481559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 18173032 - 18172903
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |    
T  18173032 acataaatctggtactatcaaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatcatttct 18172933  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| |||||| |||||||||| ||||||    
T  18172932 -ttttcacataaaccattcgttttccccttt 18172903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 39081314 - 39081467
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| |||||||||||||||| ||  ||||| |||||||||||||||| ||||  | |||||||| |||| ||||||||||||| | |||||||||||||    
T  39081314 ttttttttcttcagtacacgtatgagttttt-tctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatc 39081412  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||| | |||||||| |||||||||||||||||||||| |||||||| ||||    
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaattattt 39081467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 1418832 - 1418978
Alignment:
Q  36 ttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaa 135  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | |||||   |||||| | |||| ||||||||||||| | |||||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttt-tctagactctagttctactttttagacataatt-tgatgctatcaaaccaccatcaatttgtataatcacttaa 1418929  T
Q  136 ttactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    | | |||||||| ||||||||||||||||||||||||||||||| ||||    
T  1418930 tcagtcaatttgtaaagctatttcattgaaagaatcacaacaattattt 1418978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 15457472 - 15457602
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | ||||||||| ||||  |||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||| ||||||    
T  15457472 acataaatctggtactatcaaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaataattttt 15457571  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| || ||| |||||||||| ||||||    
T  15457572 tttttcacacaaaccattcgttttccccttt 15457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 36060027 - 36059863
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| | |||||   ||| |||| |||| ||||||||||||| | |||||||||||||||||||| | | |||||  ||||||||    
T  36060027 ttttttctagactctagttctactttttagacaaaaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctat 36059928  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    ||||||||||||| |||||||||||||| | | || ||||||| |||||||||| ||||||| ||||    
T  36059927 ttcattgaaagaaccacaacaatcatttct-tttttgcataaaccattcgtttt-cccttttcccac 36059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 38985801 - 38985651
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| || | |||||||||||||   |||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||| |    
T  38985801 acataaatttggtactatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatcatttct 38985702  T
Q  187 ctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa 239  Q
     | ||| |||||| |||| ||||| ||| ||||||||||| ||  ||||||||    
T  38985701 -ttttcacataaaacatttgtttt-ccccttttccacaacggataagtgacaa 38985651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 13997262 - 13997408
Alignment:
Q  63 ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcatt 162  Q
    ||||||||||||||  ||||  | |||||||| |||| ||||  ||||||| | |||||| ||||||||||||| | |||||||| ||| ||||||||||    
T  13997262 ctagactctagtttcactttctggacataaatttgatgctattgaaccaccgtcaatttgaataatcacttaatgagtcaatttgaaaaactatttcatt 13997361  T
Q  163 gaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||||||||||||||| |||| | | |||||||||| ||||||||||    
T  13997362 gaaagaatcacaacaattatttct-ttttcgcataaaccattcgtttt 13997408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 18916146 - 18916049
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||||| | ||||||||||| ||  |||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| |||||||||    
T  18916146 acataaatctggtactatcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaatcattt 18916049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 21747322 - 21747193
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||| | |||||||  ||  |||| |||||||||||||||||||||| |||| |    
T  21747322 acataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcattgaaagaatcacaacaataatttct 21747223  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| |||||| |||||||||| ||||||    
T  21747222 -ttttcacataaaccattcgtttttcccttt 21747193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 1226408 - 1226236
Alignment:
Q  35 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 134  Q
    ||||||| |||||||||||  ||||| ||||||||||| || ||||||  | ||||||||||||| ||| ||||||||||| ||||| |||||||||| |    
T  1226408 tttcttcggtacacgtttgagttttt-tctagactctaattctccttt--ggacataaatctgatgctaccaaaccaccctcaatttatataatcactca 1226312  T
Q  135 attactcaatttggaaagctatttc-attgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    || |  ||||||| |||| |||||| ||  ||||||||||||||||||||| | | |||||||||| |||| |||||    
T  1226311 atcagacaatttgaaaagttatttcaataaaaagaatcacaacaatcatttct-ttttcgcataaaccatttgtttt 1226236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 27302602 - 27302498
Alignment:
Q  105 caaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcatt 204  Q
    |||| |||||| ||||||||||||||||||||   |||||||| |||||||| ||||| ||||||||||||||||||||| | | |||||||||| ||||    
T  27302602 caaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcattaaaagaatcacaacaatcatttat-ttttcgcataaaccatt 27302504  T
Q  205 cgtttt 210  Q
    | ||||    
T  27302503 catttt 27302498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 268
Target Start/End: Complemental strand, 31273318 - 31273078
Alignment:
Q  25 catcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||||||||||| |||| || ||||  ||||| | || |||| || | ||||||  | || ||||| ||||  |||||||||||||  ||||||||    
T  31273318 catcattttctttctttagtatacatttgagttttt-tgtatactccagctctcctttctggacttaaatttgatgttatcaaaccacccc-aatttgta 31273221  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    |||||| ||||| | |||||||||||  |||||||||| ||||||||| |||| |||||| | | |||||||||| |||| ||||| | | ||| |||||    
T  31273220 taatcatttaatcagtcaatttggaatactatttcattaaaagaatcataacattcatttct-ttttcgcataaaccatttgtttttctc-tttcccaca 31273123  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    |||||  |||||| ||| ||||| |||| ||||| ||||||||||    
T  31273122 acagaaaagtgacaaatccaaacgacacagttaggtaaatttcac 31273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 17117729 - 17117608
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | ||||||||||||||  |||||||||||||| |        ||||||| |||||||||||||||||||||||||||||||||||| |    
T  17117729 acataaatctggtactatcaaaccacccccaatttgtataatcagt--------caatttgaaaagctatttcattgaaagaatcacaacaatcatttct 17117638  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | |||  ||||| |||||||||| ||||||    
T  17117637 -ttttcatataaaccattcgttttccccttt 17117608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 38599404 - 38599502
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctt 216  Q
    |||||||||||||||||||| | |||||||| ||| |||||||||||||||||||| |||||| |||| | | ||  |||||| |||||||||| |||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaattatttatttttt--cataaaccattcgttttcccctt 38599501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 13001560 - 13001708
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| ||| ||| ||||||  | |||| |||| |||||| || |||||||  ||||||||| |||| ||||||||||||||  ||||||||         
T  13001560 ttttcttttttcggtatacgttttgagttttttctaaactctaattctcctttttatacataaatttgatgctatcaaaccacccccaatttgta----- 13001654  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
       |||||| |||||||  |||||||||||||| |||||||||||| ||||||||||    
T  13001655 ---taattagtcaatttataaagctatttcattaaaagaatcacaataatcattttt 13001708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 29480729 - 29480600
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| |||| |||| |||||||| | |||||| |||| |||||| | | |||||||| |||  |||||||||||||||||||||||||| |||| |    
T  29480729 acataaatttgatgctattaaaccaccatcaatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaattatttct 29480630  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | |||||||||| |||| || || ||||||    
T  29480629 -ttttcgcataaaccatttgtcttccccttt 29480600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 9029622 - 9029675
Alignment:
Q  133 taattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||| ||||||| ||||| ||||||||| ||||||||||||  |||||||||    
T  9029622 taattagtcaatttagaaagttatttcattaaaagaatcacaagtatcattttt 9029675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 23164720 - 23164471
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  23164720 ttttcttttttcagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaaccacccctaatttgtataatc 23164622  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||||| | |||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  23164621 acttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgcataaaccattcgtttta-cctttttccacaacaga 23164523  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  23164522 ggagtgacaaatccaaacgacaccgttggataaatttcacctctttcactta 23164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 28132888 - 28132635
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||| ||||   |||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  28132888 atcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatcctatcaaatcacccttaatttgtat 28132789  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||    
T  28132788 aatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttt-tcttcgcataaaccattcgtttta-ccattttccacaa 28132691  T
Q  226 cagagtagtgacaa-tgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||||| | ||||| || | |||||||||||||||| ||||| |||||    
T  28132690 cagaggagtgacaagttcaaacgacgccgttagataaatttcacctctttcactta 28132635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 29387907 - 29387653
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  29387907 atcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtat 29387808  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||    
T  29387807 aatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttctacaa 29387709  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
     |||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  29387708 tagaggagtgacaaatccaaacaacaccgttagataaatttcacctctttcactta 29387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 28 - 280
Target Start/End: Complemental strand, 46791848 - 46791596
Alignment:
Q  28 cattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    ||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||  ||||||||||||    
T  46791848 cattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacctctaatttgtataa 46791749  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||  || |||| ||||||||||||    
T  46791748 tcacttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcatttttttcttcgcataaaccattcacttgaccc-ttttccacaaca 46791650  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  46791649 gaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 46791596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 35 - 280
Target Start/End: Complemental strand, 21784927 - 21784682
Alignment:
Q  35 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 134  Q
    |||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21784927 tttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcactta 21784829  T
Q  135 attactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacagagtag 233  Q
    || | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||    
T  21784828 atcagttaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggag 21784730  T
Q  234 tgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  21784729 tgacaaatccaaacgacgccgttagataaatttcacctctttcactta 21784682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 52655278 - 52655022
Alignment:
Q  26 atcattttctttcttcagtacac--gtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgt 123  Q
    ||||||||||||||| |||||||  |||||  ||||| |||||||||||||| ||||||| ||| ||||||| |||||||||||||||||  ||||||||    
T  52655278 atcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatcctatcaaaccaccactaatttgt 52655179  T
Q  124 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||    
T  52655178 ataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcctcgcataaaccattcgttttaccc-ttttccac 52655080  T
Q  224 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||| || |||||| ||| ||||| | || |||||||||||||||| ||||| |||||    
T  52655079 aacataggagtgacaaattcaaacgataccgttagataaatttcacctctttcactta 52655022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 8364087 - 8364338
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||| ||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  8364087 ttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 8364186  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||| |||||||||||||    
T  8364187 acttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcgcacaaaccatttgttttaccc-ttttccacaacag 8364285  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || || ||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  8364286 aggagagacaaatccaaacgacaccgttagataaatttcacctctttcactta 8364338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 27729922 - 27729668
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||| | ||||||||||||  ||||| | |||||||||||| ||||||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  27729922 atcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttatcaaaccacccctaatttgtat 27729823  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    |||||| |||| | |||||||||||||| |||| || ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||    
T  27729822 aatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcattattttcttcgcataaaccattcgttttacccttttt-cacaa 27729724  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || || |||||| ||| ||||| ||||||||||||||||||||| ||||| |||||    
T  27729723 catagaagtgacaaatccaaacgacactgttagataaatttcacctctttcactta 27729668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 18408103 - 18408356
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| ||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  18408103 atcattttctttctttagtacacgtttgagttttt-tctagactttagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgtat 18408201  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| ||||||| | |||||||||||||||||||||||||||| | ||||||||||  ||||||||||||| ||||||||||    
T  18408202 aatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcattttttttttcgcataaacaattcgttttaccc-ttttccacaa 18408300  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  18408301 cagagcagtgacaaatccaaacgacaccgtttgataaatttcacctctttcactta 18408356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 24252534 - 24252785
Alignment:
Q  30 ttttctttcttcagtacacgtttg--tatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataa 127  Q
    ||||||||||| ||||||||||||  | ||||| |||||||||||||| | ||||| |||||||| || |||||||||||||||||||||||||||||||    
T  24252534 ttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagatcctatcaaaccacccttaatttgtataa 24252632  T
Q  128 tcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||||| | ||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  24252633 tcacttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 24252731  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||  |||||| ||| ||||| || | |||||||||||||||| ||||| |||||    
T  24252732 gatgagtgacaaatccaaacgaccccgttagataaatttcacctctttcactta 24252785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 25599236 - 25598986
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtct-agactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||||||||||||||||| |||||  ||||| | | ||||||||||| ||||||| ||||||||||||||| |||||||||||||  |||||| ||||||    
T  25599236 ttttctttcttcagtacaggtttgagttttttttttagactctagttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataat 25599137  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | |||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||    
T  25599136 cacttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatgttt-tcttcgcataaaccattcgttttaccc-ttttccacaacag 25599039  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  25599038 aggagtgacaaattcaaacgacaccgttagataaatttcacctctttcactta 25598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 41707204 - 41706963
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||    
T  41707204 ttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgcataatc 41707105  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat---ttttctcttcgcataaatcattcgttttaccctttttccacaac 226  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||   |||| |||||||||||| |||||| |||||||||||| |||| |    
T  41707104 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttttcttcgcataaaccattcgctttacccttttt-cacacc 41707006  T
Q  227 agagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
    |||| |||||| ||| ||||| |||  ||||||||||||||||    
T  41707005 agaggagtgacaaatccaaacgacaacgttagataaatttcac 41706963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 51939704 - 51939454
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| ||| ||||||||  ||||| |||||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  51939704 ttttctttctttagtccacgtttgagttttt-tctagactctagttctcttttttgtacataaatcagatcctatcaaaccacccctaatttgtataatc 51939606  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||| ||||||||||||     
T  51939605 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcacataaaccattcgttttaccc-ttttccacaacat 51939507  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| ||| | |||||||||| ||||| |||||    
T  51939506 agaagtgacaaatccaaacgacacagttggttaaatttcacctctttcactta 51939454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 23067879 - 23067623
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    ||||||||||||||| ||||||||||||  ||||| | ||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  23067879 atcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgta 23067780  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcaca-acaatcatttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    ||||||||| |  | |||||||| |||| ||||||||| ||||||||||| ||||||||||||   |||||||||| |||| ||||||||| ||||||||    
T  23067779 taatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcacacacaatcattttttaattcgcataaaccatttgttttaccc-ttttccac 23067681  T
Q  224 aacagagtagtg-acaatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||| |||| | ||| ||||  |||| |||||||||||||||| ||||| |||||    
T  23067680 aacagaggagtgaaaaatccaaatgacaccgttagataaatttcacctctttcactta 23067623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 30 - 227
Target Start/End: Original strand, 54430468 - 54430663
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| ||| |||||||||||  ||||| ||||| |||||||| ||||||| |||||||||||||||  ||||||||||||| ||||||||||||||    
T  54430468 ttttcttttttcggtacacgtttgagttttt-tctaggctctagttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatc 54430566  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||| | |||||||| |||| ||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  54430567 acttaatcagtcaatttgaaaagttatttcattaaaagaattgcaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaaca 54430663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 56 - 274
Target Start/End: Original strand, 13401400 - 13401619
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||| ||||||||| ||||||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||||| | |||||||| |||||||    
T  13401400 tttttttctaaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagcta 13401499  T
Q  156 tttcattgaaagaatcacaacaatcatttttctct-tcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactg 253  Q
    |||||||| |||||||||||||||||||||| | |  |||||||| |||| ||||||||| ||||||||||||||| |||| | ||| ||||| |||| |    
T  13401500 tttcattggaagaatcacaacaatcatttttttttcccgcataaaccatttgttttaccc-ttttccacaacagaggagtgccaaattcaaacgacaccg 13401598  T
Q  254 ttagataaatttcacatcttt 274  Q
    | ||||||||||||| |||||    
T  13401599 taagataaatttcacctcttt 13401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 44 - 280
Target Start/End: Original strand, 6715379 - 6715604
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    |||||||||| |||||| |||||||||||||| ||||||| ||| ||||||| |||||||||||||||||  |||||||||          || | ||||    
T  6715379 tacacgtttg-atttttttctagactctagttctcctttttgtatataaatcggatcctatcaaaccacctataatttgta----------atcagtcaa 6715467  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgc 242  Q
    ||| ||||| ||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||| ||| |    
T  6715468 ttttgaaagttatttcattgaaagaatcataacaatcattttttt-ttcgcataaaccattcgttttaccctttttccacaacagaggagtgacaaatcc 6715566  T
Q  243 aaaccacactgttagataaatttcacatcttttactta 280  Q
    |||| ||||  ||| ||||||||||| ||||| |||||    
T  6715567 aaacgacaccattatataaatttcacctctttcactta 6715604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 36538308 - 36538149
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||| ||||||||| | ||||  | |||||||  |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||| ||||    
T  36538308 ttttttctaaactctagttatactttatggacataaacttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactat 36538209  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||||||||||||||||||| |||| | | |||||||||| |||||||||| ||||||    
T  36538208 ttcattgaaagaatcacaacaattatttct-ttttcgcataaaccattcgttttccccttt 36538149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 118 - 280
Target Start/End: Original strand, 20762052 - 20762214
Alignment:
Q  118 atttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||||||||||||||| || | | |||||||||  |||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||| ||    
T  20762052 atttgtataatcacttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcatttttttcgtcgcataaaccattcgttttaccc-tt 20762150  T
Q  218 ttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||||| |||| |||||| ||| ||||| | || |||  ||||||||||| ||||| |||||    
T  20762151 ttccacaatagaggagtgacaaatacaaacgataccgttgaataaatttcacctctttcactta 20762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 7767004 - 7767134
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| ||||||||| |||| | ||||  | |||||||| |||| ||||||||| ||| | |||||||||||||||||||| | |||||||| |||||||    
T  7767004 tttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcacttaatcagtcaatttgaaaagcta 7767103  T
Q  156 tttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||||||||||||||||||| ||||||    
T  7767104 tttcattgaaagaatcacaacaattattttt 7767134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 27303103 - 27303256
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| ||||||||| |||||| ||| ||||| ||||||||||| || | ||||  | |||||||| |||| | || |||||||| | |||||||||||||    
T  27303103 ttttttttcttcaggacacgtatgtgttttt-tctagactctacttctactttatggacataaatttgatgccatgaaaccaccatcaatttgtataatc 27303201  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||    
T  27303202 acttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattattt 27303256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 21596265 - 21596404
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| ||||||||||| || ||||||  | ||||||||| ||| |||||||||||| |  |||||||||||||||||||| | || |    
T  21596265 tacacgtttgcgttttt-tctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcga 21596363  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  21596364 tttggaaagctatttcattacaagaatcacaacaatcattt 21596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 42009354 - 42009225
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||  |||| |||||||||||||||||||||||||| |||| |    
T  42009354 acataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttct 42009255  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| |||||| |||||||||| ||||||    
T  42009254 -ttttcacataaaccattcgttttccccttt 42009225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 48627121 - 48626999
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||| || | |||||||| ||| |||||||||||||||||||||||||||||||| |    
T  48627121 acataaatctgatactatcagaccaccgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttat 48627022  T
Q  187 ctcttcgcataaatcattcgtttt 210  Q
     | ||| |||||| ||||||||||    
T  48627021 -ttttcacataaaccattcgtttt 48626999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 19965992 - 19965850
Alignment:
Q  67 actctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaa 166  Q
    |||||| || ||||||| | ||||||||||||| ||||||||||||    |||||||||||||||||||||| | || ||| |||||||||||||| |||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaa 19965893  T
Q  167 gaatcac-aacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||||| |||||||||||||  |  |||||||| ||||||||||    
T  19965892 gaatcacaaacaatcattttttcc--cgcataaaccattcgtttt 19965850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 27110879 - 27110771
Alignment:
Q  172 acaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacat 270  Q
    |||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||| |||||| ||| ||||| |||| |||||||||||||||| |    
T  27110879 acaacaatcattttttccttcgcataaaccattcgttttaccc-ttttccacaacagaggagtgacaaattcaaacgacaccgttagataaatttcacct 27110781  T
Q  271 cttttactta 280  Q
    |||| |||||    
T  27110780 ctttcactta 27110771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 1255142 - 1255015
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| |||||||   ||||||| ||||| |||||||||||||||||  ||||||| |||| |    
T  1255142 acataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat--caacaataatttgt 1255045  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | |||||||||| |||||||||| ||||||    
T  1255044 -ttttcgcataaaccattcgttttccccttt 1255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 50677391 - 50677277
Alignment:
Q  102 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatc 201  Q
    |||||||||||| | |||||||||||||||||||| | |||||||| ||| |||||||||||||| |||||||||||| |||| | | ||||||||||      
T  50677391 tatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaattatttct-ttttcgcataaaca 50677293  T
Q  202 attcgttttacccttt 217  Q
    ||||||||| ||||||    
T  50677292 attcgttttccccttt 50677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 46904714 - 46904811
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||| || |||| ||||||||||||| | |||||||||||||||||||| | |||||||  ||| ||||||||||||||||||||||||||| ||||    
T  46904714 acatagatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaattattt 46904811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 265
Target Start/End: Original strand, 51146879 - 51147085
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||||| |||||||   ||||| | |||||||| |||| |||| |||||||| | |||||| ||| ||||||||| | |||||||  ||| |||    
T  51146879 tttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaatttaaaaaacta 51146977  T
Q  156 tttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaatgcaaaccacactgt 254  Q
    ||| |||||||||||||||||||| | |||||||| ||||||||| ||||||||||  || ||||| || ||| || ||||||| | ||||| |||| ||    
T  51146978 ttttattgaaagaatcacaacaattattttttctc-tcgcataaaccattcgtttt--cccttttctacgacatagaagtgacattccaaacgacaccgt 51147074  T
Q  255 tagataaattt 265  Q
    ||| |||||||    
T  51147075 taggtaaattt 51147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 15987207 - 15987322
Alignment:
Q  122 gtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcc 221  Q
    ||||||||||||||| | ||||||| ||||| ||||||||| ||||||| ||||| ||||||| | | |||||||||| |||||||||| ||| ||| ||    
T  15987207 gtataatcacttaatcattcaatttcgaaagttatttcattaaaagaattacaactatcatttat-ttttcgcataaaccattcgtttttccc-tttccc 15987304  T
Q  222 acaacagagtagtgacaa 239  Q
    ||||| ||| ||||||||    
T  15987305 acaacggaggagtgacaa 15987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 40152278 - 40152124
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagtt-ttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||| ||||||| |||||||||||  ||||| | ||||||||| || ||| |||||| ||||| ||||||| ||| |||| || ||  ||||||||||||    
T  40152278 ttttttttcttcggtacacgtttgagttttttt-tagactctaattcttctttttag-acatagatctgatgctaccaaatcatccccaatttgtataat 40152181  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaa-gaatcacaacaatcattt 184  Q
    ||||||||   |||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  40152180 cacttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatcattt 40152124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 1649923 - 1649829
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 181  Q
    ||||||||||| | |||||||| |||||  |||||||||||||||||||| | |||||||| ||| |||||||| ||||||  || |||||||||    
T  1649923 acataaatctggtgctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatttcactgaaagcttcgcaacaatca 1649829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 27110956 - 27110882
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctat 104  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||| || |||| |||||||||||  |||||||    
T  27110956 ttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgtatcctat 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 43905935 - 43905862
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttca 160  Q
    ||||||||||| | ||||||||| ||||| |||||||||||||||| ||| | |||||||| |||| |||||||    
T  43905935 acataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatttca 43905862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 4207430 - 4207357
Alignment:
Q  101 ctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatc 180  Q
    ||||||||||| ||  |||||||||||||||||||| | ||||||||||||| ||||||    |||||||||||||||||    
T  4207430 ctatcaaaccatcc--aatttgtataatcacttaatcattcaatttggaaagatatttc----aaagaatcacaacaatc 4207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 454
Target Start/End: Complemental strand, 25320132 - 25320099
Alignment:
Q  421 cctccattattcatatttctttcattttgttgga 454  Q
    ||||||||||||||||||||||||||||||||||    
T  25320132 cctccattattcatatttctttcattttgttgga 25320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 3e-77; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 31 - 280
Target Start/End: Original strand, 33909980 - 33910229
Alignment:
Q  31 tttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatca 130  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||     
T  33909980 tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcctatcaaatcacccctaatttgtataatcg 33910079  T
Q  131 cttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagag 230  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  33910080 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacagag 33910178  T
Q  231 tagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
     | | || ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  33910179 gaattacaaatccaaacgacaccgttagataaatttcacctctttcactta 33910229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 6380238 - 6379983
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgta 124  Q
    |||||||| |||||| ||||||||||||  ||||| | ||||||||||||| | ||||| |||||| ||||||||||||||||||||||| |||||||||    
T  6380238 atcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcctatcaaaccacccctaatttgta 6380139  T
Q  125 taatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccaca 224  Q
    |||||||||||| | |||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  6380138 taatcacttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatcatatttttcttcgcataaaccattcgttttaccc-ttttccaca 6380040  T
Q  225 acagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||| |||||| ||| ||||| ||| |||| |||||||||||| ||||| |||||    
T  6380039 acagaggagtgacaaatccaaacgacattgttggataaatttcacctctttcactta 6379983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 11672495 - 11672751
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacata--aatctgatcctatcaaaccacccttaatttgt 123  Q
    ||||||||||||||| ||||||| ||||  ||||| |||||||||||||| ||||||| |||||||  |||| |||||||||||||||| | ||||||||    
T  11672495 atcattttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgt 11672594  T
Q  124 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    ||||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  11672595 ataatcacttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaatcatttttttcttcgcataaatcattcgttttactc-ttttccac 11672693  T
Q  224 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||| |||||| |||  |||| |||  ||| |||||||||||| ||||| |||||    
T  11672694 aacagaggagtgacaaatctaaacgacatcgtttgataaatttcacctctttcactta 11672751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 18015730 - 18015479
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| |||||| |||||  ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  18015730 ttttctttctttagtacatgtttgagttttt-tctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatc 18015632  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca--tttttctcttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||| || |||||||||||||| |||| |||||||    
T  18015631 acttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattatttttttttcttcgcattaaccattcgttttaccc-ttttacacaaca 18015533  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||  |||||| ||| ||||| |||| ||| |||||||||||| ||||| |||||    
T  18015532 gaaaagtgacaaattcaaacgacaccgtttgataaatttcacctctttcactta 18015479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 31 - 280
Target Start/End: Complemental strand, 36796520 - 36796270
Alignment:
Q  31 tttctttcttcagtacacgtttgtatttttgtctagact-ctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||| ||||||||||||  ||||| |||||||| |||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||     
T  36796520 tttctttctttagtacacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcctatcaaactacccttaatttgtataata 36796422  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||||    
T  36796421 acttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttaccc-ttttccacaacag 36796323  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| |||  |||| |||| |||||||||||||||| ||||| |||||    
T  36796322 aggagtgacaaatcaaaacgacaccgttagataaatttcacctctttcactta 36796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 33419267 - 33419016
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||| | ||||||||||  ||||| |||||||||||||| |  |||| ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  33419267 ttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatcctatcaaactacccctaatttgtataatc 33419168  T
Q  130 acttaatt-actcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | |||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| || ||||| |||||||    
T  33419167 acttaattaagtcaatttgaaaagttatttcattgaaagaatcacaataatcatttttttcttcgcataaaccattcgtttta-ccattttctacaacag 33419069  T
Q  229 agtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  33419068 aggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 33419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 26 - 280
Target Start/End: Complemental strand, 42161275 - 42161021
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctat--caaaccacccttaatttgt 123  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||| || || |||| ||||||||||  ||||||||  |||||||||| ||||||||    
T  42161275 atcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcctatatcaaaccacccctaatttgt 42161176  T
Q  124 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccac 223  Q
    |||||||||| || | | ||||||||||||||||||||||||||||||||| |||  |||||  |||||||||||| ||||||||||| |||||||||||    
T  42161175 ataatcacttgatcagttaatttggaaagctatttcattgaaagaatcacagcaacaatttt--tcttcgcataaaccattcgtttta-cctttttccac 42161079  T
Q  224 aacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||| |||||| ||| ||||| |||| |||||||||||||||| ||||| |||||    
T  42161078 aacagaggagtgacaaatccaaacgacaccgttagataaatttcacctctttcactta 42161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 42 - 280
Target Start/End: Complemental strand, 44894166 - 44893928
Alignment:
Q  42 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 141  Q
    ||||||||||||  ||||| |||||||| ||||| | ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| | ||    
T  44894166 agtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatcctattaaaccacccctaatttgtataatcacttaatcaatc 44894067  T
Q  142 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 240  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||| || || ||| || |||    
T  44894066 aatttggaaagctattttattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttttaccc-ttttccacagcaaaggagttacaaat 44893968  T
Q  241 gcaaaccacactgttagataaatttcacatcttttactta 280  Q
     ||||| |||| |||| ||||||||||| ||||| |||||    
T  44893967 tcaaacgacaccgttacataaatttcacctctttcactta 44893928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 46221856 - 46221654
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| |||| |||||||  ||||| |||||||||||||| || |||| |||||||||||  |||||||||||| |||| |||||||||     
T  46221856 atcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaactacccctaatttgtag 46221757  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| || ||||||||||    
T  46221756 aatcacttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttattcgcataaaccattcgtttta-ccattttccacaa 46221658  T
Q  226 caga 229  Q
    ||||    
T  46221657 caga 46221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 4099883 - 4100092
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| | |||||| ||| || ||||||| ||||||||||| |||| ||||||||||||| |||||||||||||    
T  4099883 ttttctttctttagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggatc-tatcaaaccacccctaatttgtataat 4099981  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag 228  Q
    |||||||| | |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||  || |||||||||||||    
T  4099982 cacttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaatcatttttttcttcgcaaaaaccattcgtttttacccttttccacaacag 4100081  T
Q  229 agtagtgacaa 239  Q
    || ||||||||    
T  4100082 aggagtgacaa 4100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 102 - 280
Target Start/End: Complemental strand, 12251365 - 12251187
Alignment:
Q  102 tatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatc 201  Q
    ||||||||||||| |||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaacc 12251266  T
Q  202 attcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||||||||||| ||||||||||||||| |||||| ||| |||||  ||| |||||||||||||||| ||||| |||||    
T  12251265 attcgttttaccc-ttttccacaacagaggagtgacaaatccaaacgtcaccgttagataaatttcacctctttcactta 12251187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 62 - 268
Target Start/End: Complemental strand, 7636443 - 7636236
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 161  Q
    ||||||||||| || ||| ||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||||||||||    
T  7636443 tctagactctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcat 7636344  T
Q  162 tgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagat 259  Q
    |||||||||| |||||||||| |||| ||||| |||||  |||||||||||||| ||||||||||||||  |||||| ||| ||||| | || |||||||    
T  7636343 tgaaagaatcgcaacaatcattttttttcttcccataagccattcgttttaccc-ttttccacaacagaagagtgacaaattcaaacgataccgttagat 7636245  T
Q  260 aaatttcac 268  Q
    |||||||||    
T  7636244 aaatttcac 7636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 32956690 - 32956927
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| |||||||||||  ||||| | |||||||||||| ||||||  | ||||||||||||| ||||||||||||||  ||||| |||||||    
T  32956690 ttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaaccacccccaatttttataatc 32956789  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    | ||||| | |||||||  |||| |||||||||||||||||||||||||| |||| | | |||||||||| |||||||||| ||| ||| ||||||| ||    
T  32956790 atttaatcagtcaatttataaagttatttcattgaaagaatcacaacaatgatttct-ttttcgcataaaccattcgtttt-cccctttcccacaacgga 32956887  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
      |||||| ||| ||||| |||||||||| ||||||||||    
T  32956888 tgagtgacaaatccaaacgacactgttaggtaaatttcac 32956927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8358447 - 8358291
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    ||||||||||||||| |||| |||||||  ||||| |||||||| ||||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||    
T  8358447 atcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttatat 8358348  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat 182  Q
    ||||||||||| | |||||||  |||| ||| |||||||||||||||||||||||||    
T  8358347 aatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatcat 8358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 26633279 - 26633464
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| |||||||| ||  ||||| |||||||||||||| | ||||  | |||||||| |||| |||| |||||||| | |||||||||||||    
T  26633279 ttttctttcttcggtacacgtatgagttttt-tctagactctagttctactttctggacataaatttgatgctataaaaccaccatcaatttgtataatc 26633377  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||||| | |||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||| ||||| |||| ||||||    
T  26633378 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttct-ttttcgcataaaccattcatttttcccttt 26633464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 26282676 - 26282510
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  26282676 tacacgtttgagttttt-tctagactttagttctcctatctgcacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 26282578  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcat-ttttctcttcgcataaatcattcgtttt 210  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||| ||||    
T  26282577 tttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcatataaatcattcatttt 26282510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 773974 - 773852
Alignment:
Q  89 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 188  Q
    ||||||||||| |||||||| ||||| ||||||||||||| |||| || | |||||||| |||||||||| ||||||||||||||||||||||||||| |    
T  773974 ataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcattttttt 773875  T
Q  189 ctt-cgcataaatcattcgtttt 210  Q
     ||  ||||||| ||||||||||    
T  773874 tttgtgcataaaccattcgtttt 773852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 30739038 - 30739227
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||| ||| |||||||||||  ||||| |||||| || | || ||||||  | ||||||||| ||| ||||||||||| | | ||||| |||||||    
T  30739038 ttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatc 30739137  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 220  Q
    ||||||| | |||||||| |||| ||||||||| ||||||||||||| |||| ||| || ||||||||||  ||| ||||| |||||||||    
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcacaacgatca-tttccttttcgcataaacaattagttttcccctttttc 30739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 40001788 - 40001694
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatca 181  Q
    ||||||||||| | |||||||||||||   |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  40001788 acataaatctggtactatcaaaccacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca 40001694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 268
Target Start/End: Complemental strand, 36438494 - 36438264
Alignment:
Q  35 tttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcactta 134  Q
    ||||||||||||| || ||  ||||| ||||| |||||||| | ||||  | |||||||| |||| ||||||||||||  | ||||||||||||||||||    
T  36438494 tttcttcagtacaggtatgagttttt-tctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcactta 36438396  T
Q  135 attactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagt 234  Q
    || | |||||||| ||| | ||||||||||||||||||||||||| |||| | | ||| |||||| |||||||||| ||||||| | || ||  || |||    
T  36438395 atcagtcaatttgaaaaaccatttcattgaaagaatcacaacaataatttat-ttttcacataaaccattcgtttt-cccttttcctacgacgtaggagt 36438298  T
Q  235 gacaatgcaaaccacactgttagataaatttcac 268  Q
    |||| | ||||  |||| ||||| ||||||||||    
T  36438297 gacattccaaatgacaccgttaggtaaatttcac 36438264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 41908092 - 41908247
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttcctttta-gtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    |||||||||||| ||||| |||||  ||||| ||| |||||| ||| || ||||  | ||||||||||||| || ||||||||||   |||||||| |||    
T  41908092 ttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgatgctttcaaaccacctccaatttgtacaat 41908191  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||| | |||||| | |||||| |||||||||||||||||||||||||||||    
T  41908192 cacttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcattt 41908247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 40841394 - 40841208
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacc-cttaatttgtataat 128  Q
    |||||||||||||||||| |||||  ||||| ||||||||||| || | ||||| | |||||||| ||||  |||||||||||| | |||||||||||||    
T  40841394 ttttctttcttcagtacatgtttgagttttt-tctagactctaattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataat 40841296  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
     |||||| || |||||||  |||| ||||  ||| ||||||| |||||| |||||| | | |||||||||| |||||||||| ||||||    
T  40841295 tacttaactaatcaatttataaagttattctattaaaagaattacaacactcatttct-ttttcgcataaaccattcgttttccccttt 40841208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 42311952 - 42312110
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| ||||||||||| || || |||  | |||||||||||||  || ||||| |||||  |||||||||||||||| |||| |||||||| ||||||||    
T  42311952 ttttttctagactctaattctcttttctggacataaatctgatgtta-caaactaccctcgatttgtataatcacttgattagtcaatttgaaaagctat 42312050  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||||| |||||||||||||| |||||| | | ||||| ||||| ||||||||| ||||||    
T  42312051 ttcattaaaagaatcacaacagtcatttat-ttttcgcttaaataattcgttttccccttt 42312110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 9479043 - 9479196
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| |||||| | ||||||| || |||||| |||| ||||||||| | ||||  | |||||||| |||| ||||||||||||| | ||||||||||||     
T  9479043 ttttttttctttaatacacgtatg-atttttttctaaactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatt 9479141  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||| | |||||||  ||| ||||||| ||||||||||||||||||| ||||    
T  9479142 acttaatcagtcaatttaaaaaactatttcgttgaaagaatcacaacaattattt 9479196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 18895489 - 18895361
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| ||||  |||||||||||  |||||||||||||||| ||||| | |||||||  |||| |||||||||||||||||||||||||| | |||     
T  18895489 acataaatttgatgttatcaaaccactattaatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatta-tttc 18895391  T
Q  187 ctcttcgcataaatcattcgttttaccctt 216  Q
    || ||||||||||  ||||||||| |||||    
T  18895390 cttttcgcataaacaattcgttttcccctt 18895361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 25061820 - 25061957
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| ||||||||||  |||||| |  ||||||||||| | ||||| | ||||||||||||| ||||||||| |  || |||||||| ||||    
T  25061820 ttttctttcttcggtacacgttttaattttttt--agactctagttcttctttttggacataaatctgatgctatcaaactattctcaatttgtacaatc 25061917  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaa 169  Q
    |||| || | | |||||| |||||||||||||||||||||    
T  25061918 actttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 40738113 - 40737994
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||| ||||||||| | |||||   |||||||| |||| ||||||||||||| | |||||||||||| ||||||| | |||||||  ||||||||    
T  40738113 ttttttctaaactctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctat 40738014  T
Q  157 ttcattgaaagaatcacaac 176  Q
    || |||||||||||||||||    
T  40738013 tttattgaaagaatcacaac 40737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 3799819 - 3799730
Alignment:
Q  120 ttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttta 211  Q
    ||||||||||| ||||| |  |||||| | ||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||    
T  3799819 ttgtataatcatttaataagccaattttggaagctatttcattgaaagaatcacaacaatcatttttttc--cgcataaaccattcgtttta 3799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 217
Target Start/End: Original strand, 1365956 - 1366110
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcat 161  Q
    |||||||| ||||| |||| |  | |||||||| || | ||||||||||||    |||| ||||||| ||||||| | |||||||| |||| ||||||||    
T  1365956 tctagactttagttctcctatctggacataaatttggtactatcaaaccactaccaattggtataatgacttaatcagtcaatttgaaaagttatttcat 1366055  T
Q  162 tgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
     |||||||||||||||||||||| | | ||| |||||| |||||||||| ||||||    
T  1366056 agaaagaatcacaacaatcatttct-ttttcacataaaccattcgttttccccttt 1366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 41852446 - 41852208
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||| |||| | ||||||||||  ||||| |||||||| ||||| |||||| || |  ||||| || | |||| ||||||| |  ||||| |||||||    
T  41852446 ttttctctctttaatacacgtttgggttttt-tctagactttagttctcctttcaggatgtaaatatggtgctataaaaccactcc-aattt-tataatc 41852350  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    ||||| | | |||||||  | || |||||||||||||||||| ||||| |||||| | | || |||||||| |||| |||| ||| ||||||||||| ||    
T  41852349 acttactcagtcaatttaaagagttatttcattgaaagaatcgcaacactcatttct-tttttgcataaataattcatttt-ccccttttccacaacgga 41852252  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatct 272  Q
    | |||||| ||| ||||| |||| ||||||||||||||||||||    
T  41852251 ggagtgacaaattcaaacgacaccgttagataaatttcacatct 41852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 7366659 - 7366788
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| ||||  ||| |||||||| | |||||| ||||| ||||||||  |||||||| ||| |||||| |||||||||||||||||||| |||| |    
T  7366659 acataaatttgatgatattaaaccaccatcaatttgaataattacttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaattatttct 7366758  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | |||||||||| ||||| |||| ||||||    
T  7366759 -ttttcgcataaaccattcattttccccttt 7366788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 44876217 - 44876126
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||| || ||||| ||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  44876217 aatttttaaaatcatttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcatttttttc--cgcataaaccattcgtttt 44876126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 12251539 - 12251466
Alignment:
Q  27 tcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcc 101  Q
    |||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  12251539 tcattttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 25610090 - 25610135
Alignment:
Q  139 ctcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  25610090 ctcaatttgaaaagtcatttcattgaaagaatcacaacaatcattt 25610135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 38525100 - 38525147
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagtttt 77  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  38525100 ttttctttctttagtacacgtttgagtttttttctagactctagtttt 38525147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 42 - 280
Target Start/End: Original strand, 16637 - 16875
Alignment:
Q  42 agtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactc 141  Q
    ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||    
T  16637 agtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacccctaatttgtataatcacttaatcagtc 16736  T
Q  142 aatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aat 240  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||||||| ||| || |||    
T  16737 aatttgaaaagctatttcattgaaagaatcacaacgatcatatttttcttcgcataaaccattcgttttaccc-ttttccacaacagaggagtaacaaat 16835  T
Q  241 gcaaaccacactgttagataaatttcacatcttttactta 280  Q
     ||||| |||| |||||||||||||||| ||||| |||||    
T  16836 ccaaacgacaccgttagataaatttcacctctttcactta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 4e-73; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 13474541 - 13474795
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||| |||||| ||||||||||||  ||||| |||| ||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||||    
T  13474541 atcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaaccacccctaatttgtat 13474640  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||| |||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  13474641 aatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaa 13474739  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||||| |||||| ||| ||||| |||| ||||||||||||| || ||||| |||||    
T  13474740 cagaggagtgacaaatccaaacgacaccgttagataaattttacctctttcactta 13474795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 26 - 280
Target Start/End: Original strand, 13656119 - 13656375
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcct---atcaaaccacccttaatttg 122  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| ||||||||||| ||||||   |  |||||| || |||||||    
T  13656119 atcattttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttg 13656217  T
Q  123 tataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttcca 222  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |    
T  13656218 tataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttcta 13656316  T
Q  223 caacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||||| |||| | ||| ||||| |||| |||||||||||||||| |||||||||||    
T  13656317 caacagaggagtgtcaaattcaaacgacaccgttagataaatttcacctcttttactta 13656375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 27 - 280
Target Start/End: Original strand, 12661216 - 12661474
Alignment:
Q  27 tcattttctttcttcagtacacgtttgtatttttgtctagactctagttttcctttta------gtacataaatctgatcctatcaaaccacccttaatt 120  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||||||||||  ||||       ||| ||||||| ||| |||||||||||||  |||||    
T  12661216 tcattttctttctttagtacacgtttgagttttt-tctagactctagtttttttttttttttttgtatataaatcggattctatcaaaccacctctaatt 12661314  T
Q  121 tgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttc 220  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||||| |||||    
T  12661315 tgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaatattttttttcttcgcataaaccattcgttttaccc-ttttc 12661413  T
Q  221 cacaacagagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    |||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||| |||||    
T  12661414 cacaacagaggagtgacaaatccaaacgacactgttagataaatttcacatctttcactta 12661474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 26377924 - 26377672
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgt-ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataat 128  Q
    ||||||||||| ||||||||||||  ||||| | ||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  26377924 ttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatcctatcaaaccacccctaatttgtataat 26377825  T
Q  129 cacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct-cttcgcataaatcattcgttttaccctttttccacaaca 227  Q
    |||||| | | ||||| ||  ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||| ||||||     
T  26377824 cacttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttcgcataaaccattcgtttta-ccttttttcacaact 26377726  T
Q  228 gagtagtgac-aatgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    ||| |||||| ||| ||||| |||| |||||||||||||||  ||||| |||||    
T  26377725 gaggagtgacaaatccaaacgacaccgttagataaatttcatctctttcactta 26377672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 64 - 280
Target Start/End: Original strand, 13423813 - 13424029
Alignment:
Q  64 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 163  Q
    |||||||||||| || |||| ||||||||||| |||||||||||||||  | ||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  13423813 tagactctagttctcttttttgtacataaatcggatcctatcaaaccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattg 13423912  T
Q  164 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 262  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |||| |||||| |||  |||| |||| ||| ||||||    
T  13423913 aaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaatagaggagtgacaaatctaaacgacaccgttcgataaa 13424011  T
Q  263 tttcacatcttttactta 280  Q
    |||||| ||||| |||||    
T  13424012 tttcacctctttcactta 13424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 64 - 280
Target Start/End: Complemental strand, 19099429 - 19099213
Alignment:
Q  64 tagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattg 163  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||  |||||||||||||||    
T  19099429 tagactatagttctcctttttgtacataaatctgatcctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattg 19099330  T
Q  164 aaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aatgcaaaccacactgttagataaa 262  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||  |  |||||||||| ||| |||||| ||| ||||| |||| ||||||||||    
T  19099329 aaagaatcacaacaatcatttttttcttcgcataaaccattcgtttta-tcactttccacaaccgagaagtgacaaatccaaacgacaccgttagataaa 19099231  T
Q  263 tttcacatcttttactta 280  Q
    |||||| ||||| |||||    
T  19099230 tttcacctctttcactta 19099213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 36718690 - 36718526
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||||||||||||| ||||||| |||||| |||| |||||||||||||||||| ||||||||||||||| ||||| | |||||||| |||| ||    
T  36718690 tttttttctagactctagttctcctttttgtacatgaatcggatcctatcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagtta 36718591  T
Q  156 tttcattgaaagaatcacaacaatca-tttttctcttcgcataaatcattcgttttacccttttt 219  Q
    ||| ||||||||||||||||| || | ||||| |||||||||||| ||||||||||||| |||||    
T  36718590 ttttattgaaagaatcacaaccataattttttttcttcgcataaaccattcgttttaccattttt 36718526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 138086 - 138245
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| | ||||| | |||||||| |||| ||||||||||||| | |||||||||||||||||||| | |||||||| ||||||||    
T  138086 ttttttctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctat 138185  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||||||||| |||||||||||| |||||| | | |||||||| |||||||||| ||||||    
T  138186 ttcattgaaataatcacaacaattattttt-tttccgcataaaccattcgttttccccttt 138245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 29156120 - 29156291
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | |||||||||||||| ||||||||||||||||||||| | ||||    
T  29156120 tacacgtttgagttttt-tctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaa 29156218  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||  |||| ||||||||||||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  29156219 tttaaaaagttatttcattgaaagaatcacaacaatcatttct-ttttcatataaaccattcgttttccccttt 29156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 217
Target Start/End: Original strand, 43511548 - 43511719
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | ||||||||||| | ||||||||||||||  |||||||||||||||||||| | ||||    
T  43511548 tacacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaa 43511646  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||| ||||||||||||| |||||||||||||||||||||| | | |||  ||||| |||||||||| ||||||    
T  43511647 tttgaaaagctatttcatggaaagaatcacaacaatcatttct-ttttcatataaaccattcgtttttcccttt 43511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 56 - 280
Target Start/End: Original strand, 26311947 - 26312153
Alignment:
Q  56 tttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagcta 155  Q
    ||||| |||||| ||||||| | ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||                       
T  26311947 tttttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaat------------------- 26312027  T
Q  156 tttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacag---agtagtgac-aatgcaaaccacac 251  Q
       |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||   || |||||| ||| ||||| ||||    
T  26312028 ---cattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttaccccttttccacaacagatcaggagtgacaaatccaaacgacac 26312124  T
Q  252 tgttagataaatttcacatcttttactta 280  Q
     |||||||||||||||| ||||| |||||    
T  26312125 cgttagataaatttcacctctttcactta 26312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 5829357 - 5829484
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||||||| | |||||||  |||||||||||||| ||||||||||||||||||||| |    
T  5829357 acataaatctggtactatcaaaccaacctcaatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatcatttct 5829454  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| |||||| |||||||||| ||||||    
T  5829455 -ttttcacataaaccattcgtttttcccttt 5829484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 4734704 - 4734552
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||| ||||| |||| |  | ||||||||||| | |||||||||||||   ||||||||||||| ||| || |||||||||| ||| ||||    
T  4734704 ttttttctagactttagttctcctatctggacataaatctggtactatcaaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctat 4734605  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    |||||||||||||||||||||||||||| | | ||| |||||| ||||||||||    
T  4734604 ttcattgaaagaatcacaacaatcatttct-ttttcacataaaccattcgtttt 4734552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 217
Target Start/End: Complemental strand, 10591407 - 10591236
Alignment:
Q  44 tacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaa 143  Q
    ||||||||||  ||||| |||||||| ||||| |||| |  | |||||||| || | ||||||||||||||  |||||||||||||||||||| | | ||    
T  10591407 tacacgtttgagttttt-tctagactttagttctcctatctgaacataaatatggtactatcaaaccacccccaatttgtataatcacttaatcagttaa 10591309  T
Q  144 tttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||| |||| ||||||||||||||||||||||||||||||| | | ||| || |||||||||||| | ||||||    
T  10591308 tttgaaaagttatttcattgaaagaatcacaacaatcatttat-ttttcacaaaaatcattcgttatccccttt 10591236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 17514026 - 17513899
Alignment:
Q  89 ataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttct 188  Q
    ||||||||| | ||| ||||||||||  |||||||||||||||||||| | |||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  17514026 ataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcactgaaagaatcacaacaatcatttct-t 17513928  T
Q  189 cttcgcataaatcattcgttttacccttt 217  Q
     ||| |||||| |||||||||| ||||||    
T  17513927 tttcacataaaccattcgtttttcccttt 17513899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 27351265 - 27351404
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||||||| |||||||   |||| |||||||||||||| ||||||  | |||||||| || | |||||||||||||   ||||||||||| |    
T  27351265 ttttctttcttcagtatacgtttgagatttt-tctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataacc 27351363  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaat 170  Q
    ||||||| | ||||||||||||| |||||||||||||||||    
T  27351364 acttaatcagtcaatttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 42291973 - 42291844
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattttt 186  Q
    |||||||| || | |||||||| ||||   |||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||| |    
T  42291973 acataaatttggtactatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttct 42291874  T
Q  187 ctcttcgcataaatcattcgttttacccttt 217  Q
     | ||| |||||| |||||||||| ||||||    
T  42291873 -ttttcacataaaccattcgttttccccttt 42291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 20975957 - 20976054
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||| || | |||||||||||||   |||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  20975957 acataaatttggtactatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattt 20976054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 8398896 - 8398989
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgt 123  Q
    ||||||||||| ||||||||||||  ||||| | |||||||||||| || |||| ||||||||||| |||||||||||||||||| ||||||||    
T  8398896 ttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcggatcctatcaaaccacccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 10033493 - 10033641
Alignment:
Q  62 tctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaat-tactcaatttggaaagctatttca 160  Q
    |||||||||||||| | ||||  |||||||||| |||| |||||||||| || | |||||||||||||||| | |  | |||||||| |||||||||| |    
T  10033493 tctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctatttta 10033592  T
Q  161 ttgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    ||||||||||||||| ||| |||| | | |||||||||| ||||||||||    
T  10033593 ttgaaagaatcacaataattatttct-ttttcgcataaaccattcgtttt 10033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 268
Target Start/End: Original strand, 40956255 - 40956465
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||||||||||| ||||||  | ||||||||||||| | |||||||   |   |||||||||||||||||||| | | |||||| ||| ||||    
T  40956255 ttttttctagactctagttctcctttgtggacataaatctgatgcaatcaaacattctccaatttgtataatcacttaatcatttaatttgaaaaactat 40956354  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgacaa-tgcaaaccacactgtt 255  Q
    |||||| ||||||||||||||||||||| | | || ||||| | |||||||||| ||||||  ||||||  ||  |||||||| | ||||| || | |||    
T  40956355 ttcattaaaagaatcacaacaatcatttctttttt-gcatacaccattcgttttcccctttc-ccacaatggaagagtgacaaatccaaacgacgccgtt 40956452  T
Q  256 agataaatttcac 268  Q
    |||||||||||||    
T  40956453 agataaatttcac 40956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 23069136 - 23069277
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    ||||||||||||  ||||||||||| ||||| | || |||||| || ||||||  | |||||||| |||| ||| ||||||||||  |||||||||||||    
T  23069136 ttttctttcttcgttacacgtttgtgttttttt-tatactctaattctcctttctgaacataaatatgatgctagcaaaccacccccaatttgtataatc 23069234  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatca 172  Q
     |||||| | || ||||||||||||||||||||  ||||||||    
T  23069235 ccttaatcattcgatttggaaagctatttcattacaagaatca 23069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 18873425 - 18873526
Alignment:
Q  87 acataaatctgatcctatcaaaccacc----cttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcat 182  Q
    |||||||| |||| |||||||||||||     ||||||||||||| |||||||| |  ||||||| ||||||||||||||||||||||||||||||| ||    
T  18873425 acataaatttgatgctatcaaaccaccatcaattaatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaattat 18873524  T
Q  183 tt 184  Q
    ||    
T  18873525 tt 18873526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 17325816 - 17325946
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaag-ctatttcattgaaagaatcacaacaatcatttt 185  Q
    |||||||| |||| |||| |||| ||| |  ||||| ||||||||||||| | |||||||| |||  ||||||||||||||||||||||||||| ||||     
T  17325816 acataaatttgatgctattaaactaccatcgatttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaattatttc 17325915  T
Q  186 tctcttcgcataaatcattcgttttacccttt 217  Q
    | | |||||||||| |||||| ||| ||||||    
T  17325916 t-ttttcgcataaaccattcgctttccccttt 17325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 7390460 - 7390363
Alignment:
Q  119 tttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    |||||||||||||||||| | |||||||  |||| |||||||| ||||||||||| ||||| |||| | | |||||||||| |||||||||| ||||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttct-ttttcgcataaaccattcgttttccccttt 7390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 33281677 - 33281743
Alignment:
Q  118 atttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||||||||||| ||| ||||||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcattt 33281743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 3349784 - 3349692
Alignment:
Q  124 ataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttacccttt 217  Q
    ||||| ||||||| | |||||||| ||||||||||||| |||||||||||||||||||||| | | ||| |||||| | |||||||| ||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttct-ttttcacataaaccgttcgttttccccttt 3349692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 40779134 - 40779286
Alignment:
Q  57 ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctat 156  Q
    |||| |||||| ||||||| ||||||  | |||||||| ||||  |||||||| | ||  |||||||||||||  ||||| | |||||||| ||| ||||    
T  40779134 ttttttctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactat 40779233  T
Q  157 ttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    | ||||| | |||||||||||||||||| | | |||| ||||| ||||||||||    
T  40779234 tccattg-aggaatcacaacaatcatttcttttttcgtataaaccattcgtttt 40779286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 931382 - 931469
Alignment:
Q  117 aatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgtttt 210  Q
    |||||||||||||||||||| | ||||||| |||||||     |||||||||||||||| |||||||| | | |||||||||| ||||||||||    
T  931382 aatttgtataatcacttaatcagtcaatttagaaagct-----attgaaagaatcacaataatcatttct-ttttcgcataaaccattcgtttt 931469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 16515496 - 16515593
Alignment:
Q  87 acataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcattt 184  Q
    |||||||| |||| |||| ||| |||| | |||||  ||||||||||||| | |||||||| |||  ||||| |||||||||||||||||||| ||||    
T  16515496 acataaatttgatgctattaaaacaccatcaattttaataatcacttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaattattt 16515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 8379669 - 8379538
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||||||||||| |||||| ||||  ||||| ||||||||||  || || |||  | |||||||| ||||  ||||||| ||||| |||||||||||||     
T  8379669 ttttctttcttcggtacacatttgagttttt-tctagactctcattctcatttatggacataaatatgatgttatcaaatcacccctaatttgtataatt 8379571  T
Q  130 acttaattactcaatttggaaagctatttcatt 162  Q
    ||||||| | | ||||| ||||| |||||||||    
T  8379570 acttaatcaattaatttcgaaagttatttcatt 8379538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 42 - 280
Target Start/End: Complemental strand, 17270 - 17031
Alignment:
Q  42 agtacacgtttgtat-ttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattact 140  Q
    |||||||||||| || |||| |||||||||||||| || |||| ||| ||||||| |||||||||||| ||||| ||||||||||||||||||||| | |    
T  17270 agtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagt 17171  T
Q  141 caatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-aa 239  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||| || |||||||||||| || |||||| ||    
T  17170 caatttggaaagctatttcgttgaaagaatcacaacaatcattttcttcttcgcataaaccattcgtttta-ccattttccacaacaaagaagtgacaaa 17072  T
Q  240 tgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    | ||||| |||| ||| |||||||||||| ||||| |||||    
T  17071 ttcaaacgacaccgttggataaatttcacctctttcactta 17031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 30 - 274
Target Start/End: Original strand, 988 - 1220
Alignment:
Q  30 ttttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatc 129  Q
    |||| |||||| | |||| |||||  ||||| |||||||||||||| ||||||| || |||||||| |||||||||||||||||| ||||||||||||||    
T  988 ttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatttgtataatc 1087  T
Q  130 acttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacaga 229  Q
    |            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| |    
T  1088 a------------atttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccc-ttttccacaacata 1174  T
Q  230 gtagtgac-aatgcaaaccacactgttagataaatttcacatcttt 274  Q
    | |||||| ||| ||||| |||| |||||||||||||||| |||||    
T  1175 ggagtgacaaatccaaacgacaccgttagataaatttcacctcttt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 26 - 268
Target Start/End: Complemental strand, 46326 - 46086
Alignment:
Q  26 atcattttctttcttcagtacacgtttgtatttttgtctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtat 125  Q
    |||||||| ||||||| |||||| |||| |||||| |||||||||||||| || ||||  |||||| |||||||||||||||||||||| ||||||| ||    
T  46326 atcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataatttggat 46227  T
Q  126 aatcacttaattactcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaa 225  Q
    ||||||||||| | |||||||||||  |||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||| |||||| |||||    
T  46226 aatcacttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatcattttt-tcttcacataaaccattcgttttactcttttt-cacaa 46129  T
Q  226 cagagtagtgac-aatgcaaaccacactgttagataaatttcac 268  Q
     |||| |||||| ||| ||||| |||| ||| | ||||||||||    
T  46128 -agaggagtgacaaatccaaacgacaccgttggctaaatttcac 46086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 22844 - 22704
Alignment:
Q  140 tcaatttggaaagctatttcattgaaagaatcacaacaatcatttttctcttcgcataaatcattcgttttaccctttttccacaacagagtagtgac-a 238  Q
    ||||| || ||| ||||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||| |||||||||||| || |||||| |    
T  22844 tcaatatgaaaaactatttcattgaaagaatcacaataattatttttttcttcgcataaaccattcgttttaccc-ttttccacaacataggagtgacaa 22746  T
Q  239 atgcaaaccacactgttagataaatttcacatcttttactta 280  Q
    || ||||| |||| |||||||||||||||| ||||| |||||    
T  22745 attcaaacgacaccgttagataaatttcacctctttcactta 22704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 8511 - 8388
Alignment:
Q  63 ctagactctagttttccttttagtacataaatctgatcctatcaaaccacccttaatttgtataatcacttaattactcaatttggaaagctatttcatt 162  Q
    ||||||||||| ||||||||  | ||||||| || || |||||||||||||| ||||||||||||||| ||||| | ||||||| |||| ||||||||||    
T  8511 ctagactctagatttcctttctggacataaaccttatgctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcatt 8412  T
Q  163 gaaagaatcacaacaatcattttt 186  Q
    ||||||||||||| ||| ||||||    
T  8411 gaaagaatcacaaaaattattttt 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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