View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0688_low_85 (Length: 248)
Name: NF0688_low_85
Description: NF0688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0688_low_85 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 4223637 - 4223418
Alignment:
| Q |
29 |
aaaggaccatccgatgaaaaacaacctccagcgagtcggaaagatacataagtatggaacacctatcaaaaattaacttgaatcaatgcaatgacaatca |
128 |
Q |
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| T |
4223637 |
aaaggaccagccgatgaaaaacaacctccagcgagtcggaaagatacataagtatggaacacctatcaaaaattaacttgaatcaatgcaatgacgatca |
4223538 |
T |
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| Q |
129 |
gaggaaacctaaaaatggaaaccataaagattaaaacaactaaaaccaggtcgtgaacatagagctaggcctaggttatgaaccacagtaacccataacg |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4223537 |
gaggaaacctaaaaatggaaaccataaagattaaaacaactaaaaccaggtcgtgaacatagagctaggcctaggttatgaaccacagtaacccataaca |
4223438 |
T |
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| Q |
229 |
ttgaagaaccatatcctaaa |
248 |
Q |
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|||||||||||||||||||| |
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| T |
4223437 |
ttgaagaaccatatcctaaa |
4223418 |
T |
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