View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0689_high_1 (Length: 549)

Name: NF0689_high_1
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0689_high_1
NF0689_high_1
[»] chr3 (49 HSPs)
chr3 (1-372)||(344863-345232)
chr3 (406-519)||(345254-345367)
chr3 (153-238)||(45236751-45236836)
chr3 (79-256)||(26490194-26490367)
chr3 (2-133)||(42510169-42510298)
chr3 (5-133)||(45289247-45289377)
chr3 (153-275)||(27917430-27917552)
chr3 (146-195)||(36820254-36820303)
chr3 (60-133)||(50960844-50960917)
chr3 (57-133)||(54128376-54128452)
chr3 (4-115)||(39235154-39235265)
chr3 (146-236)||(50249278-50249371)
chr3 (154-244)||(29928585-29928675)
chr3 (154-244)||(29977739-29977829)
chr3 (160-258)||(53519461-53519559)
chr3 (16-129)||(38430850-38430963)
chr3 (153-273)||(2341016-2341136)
chr3 (61-129)||(49503766-49503834)
chr3 (13-131)||(19736997-19737115)
chr3 (13-131)||(19757900-19758018)
chr3 (154-244)||(29919193-29919283)
chr3 (154-244)||(29968346-29968436)
chr3 (153-263)||(46431973-46432083)
chr3 (57-131)||(52138800-52138874)
chr3 (284-368)||(11283973-11284058)
chr3 (4-133)||(39600836-39600965)
chr3 (13-130)||(41842675-41842792)
chr3 (177-258)||(44395300-44395381)
chr3 (89-133)||(27917568-27917612)
chr3 (146-186)||(38054632-38054672)
chr3 (57-133)||(48734343-48734419)
chr3 (153-205)||(49841539-49841591)
chr3 (66-130)||(51447927-51447991)
chr3 (155-222)||(36868566-36868633)
chr3 (80-130)||(31337757-31337807)
chr3 (89-131)||(35033146-35033188)
chr3 (57-131)||(38060431-38060505)
chr3 (153-275)||(38849952-38850074)
chr3 (4-62)||(44571508-44571566)
chr3 (153-259)||(52138674-52138780)
chr3 (89-131)||(54279020-54279062)
chr3 (20-133)||(42026707-42026820)
chr3 (155-228)||(42510315-42510388)
chr3 (153-257)||(45728021-45728126)
chr3 (218-259)||(46146027-46146068)
chr3 (153-258)||(54278895-54279000)
chr3 (89-133)||(19676320-19676364)
chr3 (153-205)||(46568044-46568096)
chr3 (89-129)||(47233836-47233876)
[»] chr7 (54 HSPs)
chr7 (1-258)||(47848549-47848804)
chr7 (4-274)||(28628088-28628353)
chr7 (153-272)||(43282266-43282385)
chr7 (162-275)||(7189544-7189657)
chr7 (166-239)||(42187365-42187438)
chr7 (173-256)||(25579393-25579476)
chr7 (159-250)||(32630478-32630569)
chr7 (153-231)||(39811859-39811937)
chr7 (79-133)||(40169647-40169701)
chr7 (153-274)||(7272898-7273019)
chr7 (1-130)||(26742048-26742177)
chr7 (155-244)||(38135520-38135609)
chr7 (153-258)||(43281551-43281656)
chr7 (153-258)||(49029151-49029256)
chr7 (1-129)||(36101917-36102045)
chr7 (18-133)||(35713693-35713808)
chr7 (66-133)||(38920792-38920859)
chr7 (168-263)||(43281122-43281217)
chr7 (191-258)||(47235627-47235694)
chr7 (79-133)||(36136762-36136816)
chr7 (207-275)||(24425879-24425945)
chr7 (54-131)||(34869420-34869497)
chr7 (66-244)||(36514424-36514598)
chr7 (153-258)||(38606880-38606985)
chr7 (1-133)||(19262586-19262717)
chr7 (215-275)||(21517690-21517750)
chr7 (146-242)||(24549982-24550078)
chr7 (87-131)||(32630594-32630638)
chr7 (13-113)||(38135377-38135476)
chr7 (66-133)||(7189443-7189510)
chr7 (89-131)||(2885962-2886004)
chr7 (89-131)||(6374868-6374910)
chr7 (89-131)||(13859248-13859290)
chr7 (89-131)||(33072952-33072994)
chr7 (61-131)||(36869456-36869526)
chr7 (33-131)||(42187470-42187568)
chr7 (89-131)||(43281674-43281716)
chr7 (89-131)||(45836720-45836762)
chr7 (146-212)||(48736194-48736260)
chr7 (89-131)||(49029276-49029318)
chr7 (153-258)||(12841577-12841682)
chr7 (153-194)||(25826772-25826813)
chr7 (89-130)||(31682842-31682883)
chr7 (153-258)||(33072829-33072934)
chr7 (153-258)||(34869295-34869400)
chr7 (153-258)||(35906503-35906608)
chr7 (153-258)||(36651869-36651974)
chr7 (153-250)||(37617827-37617924)
chr7 (89-130)||(39906610-39906651)
chr7 (156-205)||(40139221-40139270)
chr7 (60-133)||(41948514-41948587)
chr7 (89-129)||(12841515-12841555)
chr7 (153-205)||(30200261-30200313)
chr7 (89-129)||(35906441-35906481)
[»] chr4 (57 HSPs)
chr4 (153-258)||(45205150-45205255)
chr4 (153-258)||(11389595-11389702)
chr4 (2-133)||(54470205-54470336)
chr4 (16-133)||(10209032-10209149)
chr4 (153-258)||(50662264-50662369)
chr4 (79-258)||(31458903-31459082)
chr4 (153-248)||(35690189-35690284)
chr4 (146-228)||(17900385-17900467)
chr4 (148-244)||(18499762-18499858)
chr4 (152-244)||(45094463-45094555)
chr4 (61-131)||(20192033-20192103)
chr4 (153-259)||(23906603-23906709)
chr4 (1-127)||(29398822-29398948)
chr4 (153-275)||(41009652-41009774)
chr4 (53-131)||(50471526-50471604)
chr4 (153-258)||(12494625-12494730)
chr4 (1-130)||(26037657-26037786)
chr4 (4-49)||(28351641-28351686)
chr4 (20-133)||(28497488-28497600)
chr4 (153-258)||(31960116-31960221)
chr4 (153-258)||(43433793-43433898)
chr4 (153-205)||(2588909-2588961)
chr4 (153-193)||(20105773-20105813)
chr4 (93-133)||(30621448-30621488)
chr4 (165-241)||(30853308-30853384)
chr4 (153-237)||(45185319-45185403)
chr4 (153-205)||(45423547-45423599)
chr4 (153-205)||(51252761-51252813)
chr4 (152-183)||(20998962-20998993)
chr4 (34-133)||(44047533-44047632)
chr4 (154-229)||(44860758-44860833)
chr4 (14-117)||(47611741-47611844)
chr4 (155-258)||(50680614-50680717)
chr4 (218-257)||(52280566-52280605)
chr4 (89-131)||(436229-436271)
chr4 (89-131)||(12494750-12494792)
chr4 (153-264)||(21106851-21106964)
chr4 (89-131)||(27450419-27450461)
chr4 (172-258)||(27450494-27450580)
chr4 (89-131)||(31960054-31960096)
chr4 (89-131)||(33227209-33227251)
chr4 (89-131)||(43433924-43433966)
chr4 (79-133)||(51421728-51421782)
chr4 (89-131)||(52569755-52569797)
chr4 (14-127)||(7092385-7092498)
chr4 (153-202)||(44360014-44360063)
chr4 (199-244)||(45569348-45569393)
chr4 (54-131)||(48622748-48622825)
chr4 (153-258)||(50286846-50286951)
chr4 (153-258)||(52569817-52569922)
chr4 (154-250)||(4440738-4440834)
chr4 (95-131)||(20591546-20591582)
chr4 (156-244)||(34233338-34233426)
chr4 (58-130)||(35555856-35555928)
chr4 (89-129)||(37797854-37797894)
chr4 (72-120)||(49987439-49987487)
chr4 (89-129)||(53707796-53707836)
[»] chr1 (53 HSPs)
chr1 (4-132)||(48431561-48431689)
chr1 (153-275)||(9599696-9599818)
chr1 (4-133)||(9509316-9509445)
chr1 (16-133)||(2544597-2544714)
chr1 (153-258)||(19936397-19936502)
chr1 (153-238)||(52442806-52442891)
chr1 (162-241)||(16142195-16142274)
chr1 (153-258)||(8391647-8391752)
chr1 (13-133)||(40416369-40416489)
chr1 (153-244)||(4379894-4379985)
chr1 (1-128)||(5338727-5338854)
chr1 (153-255)||(1661304-1661406)
chr1 (172-262)||(26016308-26016398)
chr1 (4-130)||(32404681-32404807)
chr1 (153-258)||(696144-696249)
chr1 (153-258)||(9592609-9592714)
chr1 (153-212)||(16822321-16822380)
chr1 (13-128)||(35828714-35828829)
chr1 (189-275)||(11331402-11331488)
chr1 (189-275)||(11489423-11489509)
chr1 (153-275)||(34827404-34827526)
chr1 (153-258)||(1210620-1210725)
chr1 (153-258)||(15085809-15085914)
chr1 (153-230)||(29578233-29578310)
chr1 (153-258)||(30202432-30202537)
chr1 (66-133)||(18469299-18469366)
chr1 (155-194)||(40920841-40920880)
chr1 (89-131)||(696269-696311)
chr1 (89-131)||(1210745-1210787)
chr1 (91-133)||(1661428-1661470)
chr1 (89-131)||(4001695-4001737)
chr1 (89-131)||(8671918-8671960)
chr1 (89-131)||(15085934-15085976)
chr1 (153-275)||(18469382-18469504)
chr1 (160-258)||(22089969-22090067)
chr1 (89-131)||(22090096-22090138)
chr1 (61-131)||(30202342-30202412)
chr1 (89-131)||(32082985-32083027)
chr1 (79-133)||(37463103-37463157)
chr1 (153-231)||(38807977-38808054)
chr1 (153-275)||(39422343-39422465)
chr1 (80-130)||(41611807-41611857)
chr1 (153-259)||(49347695-49347801)
chr1 (153-258)||(32083047-32083152)
chr1 (4-133)||(39140518-39140647)
chr1 (44-133)||(43423717-43423806)
chr1 (89-130)||(51602057-51602098)
chr1 (153-249)||(8671804-8671900)
chr1 (1-49)||(8796291-8796339)
chr1 (89-133)||(9599634-9599678)
chr1 (154-222)||(14226130-14226198)
chr1 (153-205)||(17815403-17815454)
chr1 (89-133)||(52561851-52561895)
[»] chr2 (28 HSPs)
chr2 (146-244)||(23714553-23714651)
chr2 (146-244)||(24102225-24102323)
chr2 (4-133)||(12141542-12141671)
chr2 (153-258)||(41763343-41763448)
chr2 (153-258)||(38429759-38429864)
chr2 (13-133)||(43752111-43752231)
chr2 (13-133)||(18958905-18959029)
chr2 (153-231)||(7825260-7825338)
chr2 (153-262)||(41197530-41197639)
chr2 (154-231)||(45077650-45077727)
chr2 (176-247)||(19337174-19337245)
chr2 (13-133)||(3481142-3481259)
chr2 (153-258)||(8180655-8180760)
chr2 (58-131)||(25834681-25834754)
chr2 (153-258)||(36183326-36183431)
chr2 (153-205)||(9556670-9556722)
chr2 (153-205)||(12734629-12734681)
chr2 (282-330)||(13339455-13339503)
chr2 (155-263)||(21834424-21834531)
chr2 (57-132)||(41763250-41763325)
chr2 (79-133)||(6218965-6219019)
chr2 (79-133)||(11412719-11412773)
chr2 (79-133)||(12882270-12882324)
chr2 (189-275)||(37281965-37282051)
chr2 (89-131)||(43238333-43238375)
chr2 (160-273)||(4807452-4807565)
chr2 (58-131)||(8180780-8180853)
chr2 (153-249)||(16097292-16097388)
[»] chr6 (25 HSPs)
chr6 (153-258)||(608034-608139)
chr6 (153-258)||(28027127-28027232)
chr6 (1-120)||(24665821-24665941)
chr6 (154-258)||(30031131-30031235)
chr6 (153-258)||(5631693-5631798)
chr6 (16-133)||(9593873-9593990)
chr6 (4-121)||(5897479-5897604)
chr6 (153-244)||(12134203-12134294)
chr6 (153-228)||(33083963-33084038)
chr6 (54-131)||(28085376-28085453)
chr6 (71-131)||(32755921-32755981)
chr6 (172-259)||(4948628-4948715)
chr6 (172-259)||(4955599-4955686)
chr6 (153-216)||(9594014-9594077)
chr6 (153-228)||(33998306-33998381)
chr6 (4-130)||(608158-608284)
chr6 (89-131)||(5258388-5258430)
chr6 (89-131)||(12890584-12890626)
chr6 (89-131)||(20427876-20427918)
chr6 (89-131)||(30031256-30031298)
chr6 (81-130)||(2079341-2079390)
chr6 (173-258)||(6056092-6056177)
chr6 (161-194)||(7150628-7150661)
chr6 (153-258)||(10100159-10100264)
chr6 (54-131)||(14030807-14030884)
[»] chr8 (46 HSPs)
chr8 (157-249)||(43732451-43732543)
chr8 (156-263)||(36143239-36143346)
chr8 (153-275)||(13171951-13172073)
chr8 (153-258)||(15215573-15215678)
chr8 (159-258)||(25288777-25288876)
chr8 (159-258)||(25300112-25300211)
chr8 (286-367)||(32840399-32840480)
chr8 (153-258)||(37077640-37077745)
chr8 (219-263)||(33828519-33828563)
chr8 (153-244)||(13986383-13986474)
chr8 (173-244)||(45512818-45512889)
chr8 (168-258)||(29735681-29735771)
chr8 (153-194)||(2518693-2518734)
chr8 (152-205)||(29520588-29520641)
chr8 (156-205)||(36069571-36069620)
chr8 (153-258)||(36545022-36545127)
chr8 (153-194)||(44681341-44681382)
chr8 (153-213)||(16252855-16252915)
chr8 (218-258)||(17491993-17492033)
chr8 (153-205)||(28300414-28300466)
chr8 (4-84)||(29520697-29520777)
chr8 (160-256)||(39946734-39946830)
chr8 (146-258)||(39953559-39953671)
chr8 (13-133)||(44373774-44373894)
chr8 (57-133)||(45419235-45419311)
chr8 (305-360)||(16032977-16033032)
chr8 (57-131)||(36395157-36395232)
chr8 (172-231)||(40813224-40813283)
chr8 (153-203)||(6510728-6510778)
chr8 (89-131)||(18125173-18125215)
chr8 (153-275)||(30783342-30783463)
chr8 (153-195)||(32043528-32043570)
chr8 (89-131)||(36565481-36565523)
chr8 (89-131)||(39946857-39946899)
chr8 (153-222)||(33511271-33511340)
chr8 (302-343)||(33841902-33841943)
chr8 (153-258)||(42854306-42854411)
chr8 (287-359)||(4874413-4874485)
chr8 (57-133)||(9695629-9695705)
chr8 (153-185)||(10080207-10080239)
chr8 (89-129)||(12491378-12491418)
chr8 (154-186)||(21121105-21121137)
chr8 (79-131)||(30113427-30113479)
chr8 (300-368)||(34482580-34482648)
chr8 (16-64)||(38178427-38178475)
chr8 (89-133)||(45512735-45512779)
[»] scaffold0157 (2 HSPs)
scaffold0157 (153-258)||(25747-25852)
scaffold0157 (89-131)||(25685-25727)
[»] scaffold0018 (3 HSPs)
scaffold0018 (4-133)||(44023-44152)
scaffold0018 (89-131)||(31468-31510)
scaffold0018 (153-258)||(31343-31448)
[»] chr5 (40 HSPs)
chr5 (147-244)||(16134475-16134572)
chr5 (153-258)||(16347680-16347785)
chr5 (4-250)||(32516441-32516683)
chr5 (13-128)||(43475243-43475358)
chr5 (4-101)||(21093782-21093879)
chr5 (58-133)||(33667214-33667289)
chr5 (153-275)||(6368227-6368349)
chr5 (153-258)||(1275140-1275245)
chr5 (153-258)||(1287891-1287996)
chr5 (153-258)||(2075776-2075881)
chr5 (155-256)||(5305493-5305594)
chr5 (153-258)||(12492689-12492794)
chr5 (153-246)||(21093663-21093756)
chr5 (153-262)||(21952222-21952331)
chr5 (153-258)||(28186970-28187074)
chr5 (198-258)||(27769-27829)
chr5 (1-129)||(7359412-7359539)
chr5 (91-131)||(15168792-15168832)
chr5 (61-133)||(31636132-31636204)
chr5 (154-206)||(34194799-34194851)
chr5 (89-132)||(1275263-1275306)
chr5 (66-133)||(6888991-6889058)
chr5 (80-130)||(27894-27944)
chr5 (89-131)||(1287819-1287861)
chr5 (146-258)||(1525515-1525624)
chr5 (89-131)||(4496384-4496426)
chr5 (153-195)||(6888931-6888973)
chr5 (79-133)||(14667761-14667815)
chr5 (89-131)||(16347618-16347660)
chr5 (79-133)||(18351138-18351192)
chr5 (89-131)||(24178510-24178552)
chr5 (89-131)||(28977099-28977141)
chr5 (153-256)||(31636220-31636319)
chr5 (89-131)||(38684967-38685009)
chr5 (153-194)||(9235008-9235049)
chr5 (86-131)||(37124567-37124612)
chr5 (81-133)||(10082971-10083023)
chr5 (298-354)||(26155793-26155848)
chr5 (4-120)||(29938126-29938242)
chr5 (59-131)||(34273027-34273099)
[»] scaffold0113 (1 HSPs)
scaffold0113 (89-131)||(11836-11878)
[»] scaffold0570 (1 HSPs)
scaffold0570 (89-130)||(1188-1229)


Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 344863 - 345232
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  344863 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctctctacatgaccaaactacttaagcctatttt 344962  T
Q  101 ctaacatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataac 200  Q
    |||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  344963 ctaacatcttttctactataagtgctaccccaactctctctct--aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataac 345060  T
Q  201 atcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatccccgagttttaatatatacttcata 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  345061 atcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacacttggttttatacaacatccccgagttttaatatatacttcata 345160  T
Q  301 ttttaaaataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaacttcgttcatttgctt 372  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  345161 ttttaaaataattgaaacaatatcatgatatatgatcatataacatttcaatcaaacttcgttcatttgctt 345232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 406 - 519
Target Start/End: Original strand, 345254 - 345367
Alignment:
Q  406 tcacacttcattcatctgtagaaacatttcataggcctcccctccccctcttaaacccactcccaaactgttggggaattcggaggagcacgggagcaat 505  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  345254 tcacacttcattaatttgtagaaacatttcatagccctcccctccccctcttaaacccactcccaaactgttggggaattcggaggagcacgggagcaat 345353  T
Q  506 aacaggccaatgct 519  Q
    ||||||||||||||    
T  345354 aacaggccaatgct 345367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 45236836 - 45236751
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttg 238  Q
    |||||||||||| ||||  |||||||||||||||| |||||||  ||||||||||| || |||| |||||||||||||| ||||||    
T  45236836 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 45236751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 256
Target Start/End: Complemental strand, 26490367 - 26490194
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagt 178  Q
    |||||| || ||||||||||||||| |||||||||||||||| |||||||| |||            |||| | ||||| |||||| |||| ||||| ||    
T  26490367 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaactctgtct----aatgacgtcattgctaatcatatcccgtcttgt 26490272  T
Q  179 cttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaaca 256  Q
    ||||||||  |||||||  |||||||| || |||||||  ||||||| |||||  ||||||||||||||||| |||||    
T  26490271 cttaccactcatccaacgcaacatcctcatctccgctacacttacttgattctcttgttggttcttaaccgcccaaca 26490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 42510169 - 42510298
Alignment:
Q  2 tgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttc 101  Q
    ||||||| || |||||||||||||||||| ||||||| ||| |||| | ||||| || ||||| |||  ||||| | |||||| || |||||||||||||    
T  42510169 tgcctctagtgatctgactatcctccatctgatctactctccttaccacaaaatctataggtcttct--ctacatgtccaaaccacctaagcctattttc 42510266  T
Q  102 taacatcttttctactataagtgctaccccaa 133  Q
     |  ||||||||||||||| |||||| |||||    
T  42510267 cactatcttttctactataggtgctatcccaa 42510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 45289247 - 45289377
Alignment:
Q  5 ctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaa 104  Q
    |||||||||||| ||||||||||||| ||||||| ||  |||||| ||||| |||| ||  |||| ||||  | |||||| || ||||||||||||| |     
T  45289247 ctcttgtaatctaactatcctccatctgatctactcttcttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccac 45289346  T
Q  105 catcttttctact--ataagtgctaccccaa 133  Q
    |||||||||||||  ||| ||||||||||||    
T  45289347 catcttttctactgaataggtgctaccccaa 45289377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 27917552 - 27917430
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||  ||||||||||| ||||||||  |||||||| |||||||| || || |||| |||||||| ||||| || |||||||||||| || |    
T  27917552 tcattcctaatcaaatctcgtctaggcttaccactcatccaacacaacatcctcatctctgctacgcttacttgattctcgttttggttcttaactgcac 27917453  T
Q  253 aacactttgttttatacaacatc 275  Q
    | ||||||||   ||||||||||    
T  27917452 atcactttgtaccatacaacatc 27917430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 36820254 - 36820303
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaac 195  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  36820254 aatgtcgtcatttctaatcctatctcgtctagtcttaccacacatccaac 36820303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 50960844 - 50960917
Alignment:
Q  60 aggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||| |||| ||||| | |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaa 50960917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 54128452 - 54128376
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||||| | || ||||| | |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||    
T  54128452 tacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaa 54128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 39235265 - 39235154
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||| | |||||||| ||||||||| ||||||| ||   ||||| || || |||||||| |||| ||||| | |||||| || |||||||||||||||    
T  39235265 cctcttttgatctgactttcctccatctgatctactcttcgtactacaacatctacaggtcttctctctacatgcccaaaccacctaagcctattttcta 39235166  T
Q  104 acatcttttcta 115  Q
     |||||||||||    
T  39235165 ccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 50249371 - 50249278
Alignment:
Q  146 aatgtcatcatttctaatc---ctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgt 236  Q
    ||||| |||||||||||||   ||||||||||||||| ||||||| |||||||  |||||| | || ||||||||||||| |||||||| ||||    
T  50249371 aatgttatcatttctaatcatcctatctcgtctagtcctaccacacatccaacgaaacatcatcatctccgctatgcttattttattctcgtgt 50249278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 29928585 - 29928675
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||| ||||||||||| || ||||||| |||||||| |||||| | || ||| ||| ||| | ||||||||||| |||||||||    
T  29928585 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacgctgattttattcttgttttggttctt 29928675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 29977739 - 29977829
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||| ||||||||||| || ||||||| |||||||| |||||| | || ||| ||| ||| | ||||||||||| |||||||||    
T  29977739 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacgctgattttattcttgttttggttctt 29977829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 53519559 - 53519461
Alignment:
Q  160 taatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||  ||||||| |||||||  |||||||  |||||||| ||||||||||  || |||||| ||| ||||||| ||||||||||| ||||||    
T  53519559 taatcctatcctgtctagtattaccactcatccaacgcaacatcctcatttccgctacactaactttactctcgtgttggctcttaaccgcttaacact 53519461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 38430963 - 38430850
Alignment:
Q  16 tgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttcta 115  Q
    ||||| ||||||||| ||||||| ||   ||||| || || | |||||| |||| ||||| | |||| | || ||||||||||||||| |||||||||||    
T  38430963 tgactctcctccatctgatctactcttcatactacaacatctgcaggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttcta 38430864  T
Q  116 ctataagtgctacc 129  Q
    ||||| ||||||||    
T  38430863 ctataggtgctacc 38430850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 2341016 - 2341136
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||| |||||  |||||||||||||||| ||||||   |||||||| || ||| |||| |||| |||||||| | |||| ||||| ||| | |    
T  2341016 tcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctcatctccactatccttattttattctcgcgttgattctttaccaccc 2341115  T
Q  253 aacactttgttttatacaaca 273  Q
    |||| ||||| | ||||||||    
T  2341116 aacattttgtctcatacaaca 2341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 49503766 - 49503834
Alignment:
Q  61 ggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacc 129  Q
    |||| |||| ||||| | |||||| || ||||||||||||||| |||||||||||||||| ||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 49503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 19737115 - 19736997
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||| ||| ||||||||| ||||||| ||  |||||| || || |||||||| |||| || || |  ||||| || ||| ||||||||||| ||||||||    
T  19737115 atctaactctcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatctttt 19737016  T
Q  113 ctactataagtgctacccc 131  Q
    |||||||| ||||| ||||    
T  19737015 ctactataggtgctgcccc 19736997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 19758018 - 19757900
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||| ||| ||||||||| ||||||| ||  |||||| || || |||||||| |||| || || |  ||||| || ||| ||||||||||| ||||||||    
T  19758018 atctaactctcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatctttt 19757919  T
Q  113 ctactataagtgctacccc 131  Q
    |||||||| ||||| ||||    
T  19757918 ctactataggtgctgcccc 19757900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 29919283 - 29919193
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||| ||||||||||| || ||||||| |||||||| |||||| | || ||| |||  || | |||||||| ||||||||||||    
T  29919283 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttggttctt 29919193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 29968436 - 29968346
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||| ||||||||||| || ||||||| |||||||| |||||| | || ||| |||  || | |||||||| ||||||||||||    
T  29968436 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttggttctt 29968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 46431973 - 46432083
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||| ||||||  |||||||||||||||| ||||||   |||||||  || ||| | ||||||| ||||||||||| || ||| || ||||| |    
T  46431973 tcatttctaaccctatcctgtctagtcttaccacacatccaatgcaacatccccatctcctccatgcttattttattcttgtattagttgtttaccgccc 46432072  T
Q  253 aacactttgtt 263  Q
    |||||| ||||    
T  46432073 aacactctgtt 46432083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 52138874 - 52138800
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||||| |||| ||||| | |||||| |  ||||||||||||||| || ||||||||||||| ||||||||||    
T  52138874 tacaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 52138800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 11284058 - 11283973
Alignment:
Q  284 ttaatatatacttcatattttaaa-ataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaacttcgttcattt 368  Q
    ||||||||||||| | |||||||| | ||| |||| ||||||||||||||||||||| ||| | |||||| | ||||| |||||||    
T  11284058 ttaatatatacttgagattttaaacaaaatcgaaagaatatcatgatatatgatcatataaaaattcaattacacttcattcattt 11283973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 39600836 - 39600965
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    ||||||| ||||||||||||||| ||| ||||||| ||| |  ||| | ||| |||||||| ||||  |||| | | |||| || ||||| | ||||| |    
T  39600836 cctcttgcaatctgactatcctcgatctgatctactctcctcgctacagaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttcca 39600935  T
Q  104 acatcttttctactataagtgctaccccaa 133  Q
     |||||||||||||||| || |||||||||    
T  39600936 ccatcttttctactataggtactaccccaa 39600965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 41842675 - 41842792
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||||||  ||||||| |||||||||| | ||| ||| | || |||| |||||   |||||| || |||| ||  |||| | ||||||||    
T  41842675 atctgactatcctccatttgatctactctcattactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatctttt 41842774  T
Q  113 ctactataagtgctaccc 130  Q
    |||||||| |||||||||    
T  41842775 ctactataggtgctaccc 41842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 44395381 - 44395300
Alignment:
Q  177 gtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||| || ||||| ||| |||| || ||  |||||||||  |||||||||||||||||||| ||||| |||||||    
T  44395381 gtcttaccacacattcaacacaacttcctcatctcttctatgcttatcttattcttgtgttggttctttaccgcccaacact 44395300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 27917612 - 27917568
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  27917612 taagcctatttcctaccatcttttctactataggtgctaccccaa 27917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 38054632 - 38054672
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccac 186  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  38054632 aatgttatcatttctaatcctatcccgtctagtcttaccac 38054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 48734343 - 48734419
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||| || |||| ||||| | |||||| || ||||||||||||||| ||||| |||||||||| | ||||||||||    
T  48734343 tacagttcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactatacgcgctaccccaa 48734419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 49841591 - 49841539
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    |||||||||||| || ||||||||||||||| ||| |||||||| ||||||||    
T  49841591 tcatttctaatcttacctcgtctagtcttactacacatccaacacaacatcct 49841539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 51447927 - 51447991
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    |||| ||||| | ||||||||  ||||||||||||||| || ||||||||||||| |||||||||    
T  51447927 tctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccc 51447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 36868566 - 36868633
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgctta 222  Q
    |||||||||| ||||||| || |||||||||||||| ||||| |||||||| || || |||| |||||    
T  36868566 atttctaatcatatctcgcctggtcttaccacaaattcaacacaacatcctcatctctgctacgctta 36868633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 31337757 - 31337807
Alignment:
Q  80 caaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||| ||||||||||| |||| | |||||||||||||||| |||||||||    
T  31337757 caaaccacttaagcctagtttcaaccatcttttctactataggtgctaccc 31337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 35033188 - 35033146
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  35033188 taagcctattttctaccaacttttctactataggtgctacccc 35033146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 38060505 - 38060431
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||||| |||| ||||| | |||||| |  ||||||||||||||| || |||||||| |||| ||||||||||    
T  38060505 tacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctacccc 38060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 38850074 - 38849952
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| ||||  |||||||||||| ||  ||||| |  |||||||| || || ||||  ||||||| ||||| ||||||  |||||||||| |    
T  38850074 tcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgctacacttacttgattctcgtgttgactcttaaccgccc 38849975  T
Q  253 aacactttgttttatacaacatc 275  Q
    ||||||||||   ||||||||||    
T  38849974 aacactttgtaccatacaacatc 38849952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44571566 - 44571508
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacagg 62  Q
    |||||||||||||||||||| |||||  ||||||| ||| |||||| ||||| ||||||    
T  44571566 cctcttgtaatctgactatcatccatttgatctactctccttactacaaaatctacagg 44571508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 52138780 - 52138674
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  | |||  |||||||||| |    
T  52138780 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatcttgactcttaaccgccc 52138681  T
Q  253 aacactt 259  Q
    |||||||    
T  52138680 aacactt 52138674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 54279062 - 54279020
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  54279062 taagcctattttctaccaacttttctactataggtgctacccc 54279020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 42026707 - 42026820
Alignment:
Q  20 tatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactat 119  Q
    |||||||| || ||||||| ||| |||||||| ||| |||| ||  |||| ||||| |  ||||| || |||||||| |||| | | ||||||||||| |    
T  42026707 tatcctccgtctgatctactctccttactaaataatctacaagttttctctctacaagctcaaaccacctaagcctagtttccaccctcttttctactgt 42026806  T
Q  120 aagtgctaccccaa 133  Q
     |||||||||||||    
T  42026807 gagtgctaccccaa 42026820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 42510315 - 42510388
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttat 228  Q
    |||||||| |||||| | ||||||||||||||| ||||||   |||||||| || || |||||||||| |||||    
T  42510315 atttctaaacctatcccatctagtcttaccacacatccaatgcaacatcctcatctctgctatgcttattttat 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 45728126 - 45728021
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgtt-ggttcttaaccgct 251  Q
    |||||||||||||||| |||||| ||||||||||  ||||| |  |||||||| || || ||||  ||||||| |||||  |||| || ||||||||||     
T  45728126 tcatttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgctacacttacttgattctcatgttgggctcttaaccgcc 45728027  T
Q  252 caacac 257  Q
    ||||||    
T  45728026 caacac 45728021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 46146068 - 46146027
Alignment:
Q  218 gcttactttattcttgtgttggttcttaaccgctcaacactt 259  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||    
T  46146068 gcttattttattcttgtgttggttctttaccgcccaacactt 46146027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 54279000 - 54278895
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||| |||||| |||||||||||||||  |||||||  |||||||| || || ||||  ||||| | |||||| |||||  ||||||| || |    
T  54279000 tcattcctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgctacacttacctgattcttatgttgactcttaactgccc 54278901  T
Q  253 aacact 258  Q
    ||||||    
T  54278900 aacact 54278895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 19676320 - 19676364
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| |||||||| |||||||| ||||||| ||||||||||||    
T  19676320 taagccaattttctatcatcttttgtactataggtgctaccccaa 19676364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 46568096 - 46568044
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||| | |||| ||||||||||| |||| |||||||| ||||||||    
T  46568096 tcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcct 46568044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 47233836 - 47233876
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  47233836 taagcctattttctaccaacttttctactataggtgctacc 47233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 47848804 - 47848549
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || ||| |||||||||||||| ||||||| ||| ||| || | |||||||| ||| |||| | ||| | |||||| || ||||||||||||    
T  47848804 ctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtcttctctcgacatgcccaaaccacctaagcctatttt 47848705  T
Q  101 ctaacatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataac 200  Q
    | | |||||||||||||||| | ||||||||||            ||||| |||| |||| |||||||| ||||||||||||||||| |||||||| |||    
T  47848704 ccaccatcttttctactataggcgctaccccaactctctctct--aatgttatcacttctgatcctatcccgtctagtcttaccacacatccaacacaac 47848607  T
Q  201 atcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||| || ||| |||  |||| |||||||| |||||||||||||||| | |||||||    
T  47848606 atcctcatctcccctagacttattttattctcgtgttggttcttaaccacccaacact 47848549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 274
Target Start/End: Original strand, 28628088 - 28628353
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||||| || ||||||||||||||| ||||||| ||| |||||| | ||| |||||||  ||||  |||| | |||||| || |||||| |||||| |    
T  28628088 cctcttgtgatttgactatcctccatcggatctactctccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttcca 28628187  T
Q  104 acatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatc 203  Q
     |||| |||||||| || ||||||| ||||            |||||  | ||||||||||| ||| ||| | ||||||||| | ||||||   ||||      
T  28628188 ccatcatttctactctaggtgctactccaa--ctccctctctaatgttgtaatttctaatcccatcccgtatggtcttaccatacatccaaggcaaca-- 28628283  T
Q  204 ctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacat 274  Q
     |||| || |||| |||||||||||||| ||||||||||| |||||| ||||||||||||  |||||||||    
T  28628284 -taatctctgctacgcttactttattctcgtgttggttctcaaccgcccaacactttgttccatacaacat 28628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 43282385 - 43282266
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||| ||||  |||||| ||||||||| ||| |||  |||||||| || |||| | |||||| ||||||||||||||||||| | |||||      
T  43282385 tcatttctaatcatatcatgtctagacttaccacacatctaacgcaacatcctcatatccgttgtgcttaatttattcttgtgttggttcgtcaccgccg 43282286  T
Q  253 aacactttgttttatacaac 272  Q
    |||||||||||  |||||||    
T  43282285 aacactttgttccatacaac 43282266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 275
Target Start/End: Original strand, 7189544 - 7189657
Alignment:
Q  162 atcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttg 261  Q
    ||||||||||||||| |||||||    || ||||| |||||||| || ||| |||||||||||| ||| |||||||||||||||||| | ||||||| ||    
T  7189544 atcctatctcgtctaatcttaccggtcattcaacacaacatcctcatctccactatgcttacttgatttttgtgttggttcttaaccacccaacactctg 7189643  T
Q  262 ttttatacaacatc 275  Q
    |   ||||||||||    
T  7189644 taccatacaacatc 7189657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 42187438 - 42187365
Alignment:
Q  166 tatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttgg 239  Q
    |||| ||||||||||||| ||| |||||||| |||||||| || ||||||| ||||||| ||||||||||||||    
T  42187438 tatcccgtctagtcttactacacatccaacacaacatcctcatctccgctacgcttactctattcttgtgttgg 42187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 25579393 - 25579476
Alignment:
Q  173 tctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaaca 256  Q
    |||||| |||||||| |||||||  |||||||| || ||| ||| ||||| |||||||| |||||||||||||||||| |||||    
T  25579393 tctagtattaccacacatccaacgcaacatcctcatctcctctacgcttattttattctcgtgttggttcttaaccgcccaaca 25579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 32630569 - 32630478
Alignment:
Q  159 ctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgc 250  Q
    |||||||||||  |||||||||||||||  ||||| |  |||||||| || |||||||  ||||||||| ||| ||||||||||||||||||    
T  32630569 ctaatcctatcatgtctagtcttaccactcatccagctcaacatcctcatctccgctacacttactttactctcgtgttggttcttaaccgc 32630478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 39811937 - 39811859
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattct 231  Q
    ||||||||||||||||| ||||||||||||||||| ||||||   |||||||| || ||||||| ||||  ||||||||    
T  39811937 tcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcatatccgctacgcttgttttattct 39811859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 40169701 - 40169647
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || ||||||||||||| | |||||||||||||||||||||||||||||    
T  40169701 ccaaaccacctaagcctattttccaccatcttttctactataagtgctaccccaa 40169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 274
Target Start/End: Complemental strand, 7273019 - 7272898
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||||| ||| |||||||||| |  ||||| || |||||||| || |||| ||  ||||||| ||||| ||||||| ||| |||||| |    
T  7273019 tcattcctaatcctatcccgtgtagtcttaccgctcatccagcacaacatcctcatctccggtacacttacttgattctcgtgttggctctcaaccgccc 7272920  T
Q  253 aacactttgttttatacaacat 274  Q
    |||||| ||| | |||||||||    
T  7272919 aacactctgtatcatacaacat 7272898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 26742048 - 26742177
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || |||||||||| ||| ||| ||||||| ||| |||| | ||||| || ||||| | || ||||| |  ||||| || ||| ||||||||    
T  26742048 ctgcctctagtgatctgactattctctatctgatctactctccttaccacaaaatctataggtcgtttctctacatgttcaaaccacctaatcctatttt 26742147  T
Q  101 ctaacatcttttctactataagtgctaccc 130  Q
    | | |||||||||||||||| |||||||||    
T  26742148 ccaccatcttttctactataggtgctaccc 26742177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 38135520 - 38135609
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||| |||||||||| | |||| |||||||||| |||||||| || ||||| || ||||||| ||||  |||||||| ||||||||||||    
T  38135520 atttataatcctatcccatctaatcttaccacacatccaacaaaagatcctcatctccgctacgcttgttttattctagtgttggttctt 38135609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 43281656 - 43281551
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||| | |||||||||||||||  ||||| |  |||||||| ||  ||||||  ||||||||| ||||| ||||| |||||||||| |    
T  43281656 tcattcctaatcctatattgtctagtcttaccactcatccagcgcaacatcctcatccccgctacacttactttactcttgcgttggctcttaaccgccc 43281557  T
Q  253 aacact 258  Q
    ||||||    
T  43281556 aacact 43281551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 49029256 - 49029151
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  ||||||| ||||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  49029256 tcattcctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 49029157  T
Q  253 aacact 258  Q
    ||||||    
T  49029156 aacact 49029151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36101917 - 36102045
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || |||||||||| ||||||  ||||||| |||  |  || ||||| || ||||| |||| |||||   |||||| || ||||||||||||    
T  36101917 ctgcctctagtgatctgactattctccatatgatctactctccctgttacaaaatctataggtcttctctctacatccccaaaccacctaagcctatttt 36102016  T
Q  101 ctaacatcttttctactataagtgctacc 129  Q
    | ||||||||||||| |||| ||||||||    
T  36102017 ccaacatcttttctattataggtgctacc 36102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 35713808 - 35713693
Alignment:
Q  18 actatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctact 117  Q
    |||| ||| |||| ||||||| ||| |||||| ||||| |||| ||| |||| ||||| | |||||| || ||||||||||||| | ||| ||||| |||    
T  35713808 actacccttcatcagatctactctccttactacaaaatgtacaagtcttctctctacatgcccaaaccacctaagcctattttccaccattttttcaact 35713709  T
Q  118 ataagtgctaccccaa 133  Q
    ||| || |||||||||    
T  35713708 atatgtcctaccccaa 35713693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 38920859 - 38920792
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||| ||||| | |||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctaccccaa 38920792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 43281217 - 43281122
Alignment:
Q  168 tctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgtt 263  Q
    ||||||||||||||||||   |||||||| |||||||| || ||| | ||||||| ||||||||  ||||||||||| | ||| ||||||| ||||    
T  43281217 tctcgtctagtcttaccatgcatccaacacaacatccttatctccacaatgcttaatttattctcatgttggttcttcaacgcacaacactctgtt 43281122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 47235694 - 47235627
Alignment:
Q  191 ccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||| ||||||| | |||||| ||| |||||||||||||  |||||||||||| |||||||||||||    
T  47235694 ccaacgtaacatcatcatttccactacgcttactttattcacgtgttggttctttaccgctcaacact 47235627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 36136816 - 36136762
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || |||| |||||||||| |||||||||||||||| ||||||||||||    
T  36136816 ccaaacaacctaagactattttctaccatcttttctactataggtgctaccccaa 36136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 24425879 - 24425945
Alignment:
Q  207 atttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatc 275  Q
    ||||||||||  |||||||||||  |||||||||| |||||| ||||||| ||||||| ||||||||||    
T  24425879 atttccgctaaacttactttatt--tgtgttggttattaaccactcaacattttgtttcatacaacatc 24425945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 34869497 - 34869420
Alignment:
Q  54 atttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| |||| |||| ||||| | |||||| |  ||||||||||||||| || ||||||||||||| ||||||||||    
T  34869497 atttacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 34869420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 244
Target Start/End: Original strand, 36514424 - 36514598
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcc 165  Q
    |||| ||||| | |||||| || |||| ||| |||||| |||||||||||||||| ||||||||||||            |||||  || |||||||| |    
T  36514424 tctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctctct----aatgttgtcctttctaattc 36514519  T
Q  166 tatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||| ||| ||||||||||||| |||||||  |||||||| || || ||||  |||| |||||| | ||||||||||||    
T  36514520 tatcccgtttagtcttaccacacatccaacgcaacatcctcatctctgctacacttaatttattttcgtgttggttctt 36514598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 38606985 - 38606880
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  ||||| |  |||||  | || |||||||  ||||||||| ||| ||||||| |||||||||| |    
T  38606985 tcattcctaatcctatcatgtctagtcttaccactcatccagcgcaacattatcatctccgctacacttactttactctcgtgttggctcttaaccgccc 38606886  T
Q  253 aacact 258  Q
    ||||||    
T  38606885 aacact 38606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19262586 - 19262717
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || || ||||||  ||||||| ||||||| ||  |||||| ||| | |||||||| |||| ||||| |  ||||| || |||||| | |||    
T  19262586 ctgcctctagtgatttgactacactccatctgatctactcttcttactacaaa-tctacaggtcttctctctacatgctcaaaccacctaagccaagttt 19262684  T
Q  101 ctaacatcttttctactataagtgctaccccaa 133  Q
    ||| |||||||||||| ||| ||||||||||||    
T  19262685 ctaccatcttttctacaataggtgctaccccaa 19262717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 21517690 - 21517750
Alignment:
Q  215 tatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatc 275  Q
    |||||||| |||||||| ||||||||||||||||||  |||||| ||||  ||||||||||    
T  21517690 tatgcttattttattctcgtgttggttcttaaccgccaaacactatgttccatacaacatc 21517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 24549982 - 24550078
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttc 242  Q
    ||||| ||||||||||||| |||    ||||||||||| ||| |||||||| |||||||| || || |||| || || |||||| ||||||||||||    
T  24549982 aatgttatcatttctaatcatattctatctagtcttacaacacatccaacacaacatcctcatctctgctacgcataatttatttttgtgttggttc 24550078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 32630638 - 32630594
Alignment:
Q  87 cttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||    
T  32630638 cttaagcctattttctaccaacttttctactataggtgctacccc 32630594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 38135377 - 38135476
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||||||| ||||||  ||| |||||| ||||| ||| |||| |||  ||||| | |||||| || ||||||||||||| | ||||||||    
T  38135377 atctgactatcctccatctgatctat-ctccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatctttt 38135475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 7189443 - 7189510
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||| ||||| | |||||| || ||||| ||||||||| |||||||||||||||| |||| |||||||    
T  7189443 tctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaa 7189510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 2885962 - 2886004
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  2885962 taagcctattttctaccaacttttctactataggtgctacccc 2886004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 6374910 - 6374868
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  6374910 taagcctattttctaccaacttttctactataggtgctacccc 6374868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 13859248 - 13859290
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  13859248 taagcctattttctaccaacttttctactataggtgctacccc 13859290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 33072994 - 33072952
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  33072994 taagcctattttctaccaacttttctactataggtgctacccc 33072952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 36869456 - 36869526
Alignment:
Q  61 ggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||| |||| ||||| |||||||| |  ||| ||||||||||| || ||||||||||||| ||||||||||    
T  36869456 ggtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctactataggtgctacccc 36869526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 42187568 - 42187470
Alignment:
Q  33 atctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| ||| |||||| | ||| |||||| | ||||  |||| | |||||| || ||||||||||||| | ||||||||||| |||| ||||||||||    
T  42187568 atctactctccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacccc 42187470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 43281716 - 43281674
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  43281716 taagcctattttctaccaacttttctactataggtgctacccc 43281674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 45836720 - 45836762
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  45836720 taagcctattttctaccaacttttctactataggtgctacccc 45836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 48736194 - 48736260
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttcc 212  Q
    |||||| |||||||||||  |||||| ||||||||||||||| || ||||  |||||||| ||||||    
T  48736194 aatgtcgtcatttctaattttatctcatctagtcttaccacacattcaacgcaacatcctcatttcc 48736260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 49029318 - 49029276
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  49029318 taagcctattttctaccaacttttctactataggtgctacccc 49029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 12841577 - 12841682
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  ||||||| |||||||  |||||||| |||||||| || || ||||  ||||||| |||||  |||||  |||||||| | |    
T  12841577 tcattcctaatcctatcatgtctagttttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccaccc 12841676  T
Q  253 aacact 258  Q
    ||||||    
T  12841677 aacact 12841682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 25826772 - 25826813
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaa 194  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
T  25826772 tcatttctaatcctatctcgtatggtcttaccacatatccaa 25826813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 31682842 - 31682883
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||||||||||||| || ||||||||||||| |||||||||    
T  31682842 taagcctattttctaccaacttttctactatatgtgctaccc 31682883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 33072934 - 33072829
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| |||||||||||||||  |||||||  |||||| | || || ||||  |||| || |||||  |||||  |||||||||| |    
T  33072934 tcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcatcatctctgctacacttatttgattctcatgttgactcttaaccgccc 33072835  T
Q  253 aacact 258  Q
    ||||||    
T  33072834 aacact 33072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 34869400 - 34869295
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || ||  |||  ||||||| |||||  |||||  |||||||||| |    
T  34869400 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctactacacttacttgattctcatgttgactcttaaccgccc 34869301  T
Q  253 aacact 258  Q
    ||||||    
T  34869300 aacact 34869295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 35906503 - 35906608
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||| | |    
T  35906503 tcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccaccc 35906602  T
Q  253 aacact 258  Q
    ||||||    
T  35906603 aacact 35906608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 36651974 - 36651869
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || | ||  ||||||| |||||  |||||  |||||||||| |    
T  36651974 tcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgttacacttacttgattctcatgttgactcttaaccgccc 36651875  T
Q  253 aacact 258  Q
    ||||||    
T  36651874 aacact 36651869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 37617924 - 37617827
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgc 250  Q
    ||||| |||||||||||| |||||||||||||||  |||||||  |||||||| || || ||||  ||| ||| |||||  |||||  ||||||||||    
T  37617924 tcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttgcttgattctcatgttgactcttaaccgc 37617827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 39906610 - 39906651
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||||||||||||| || ||||||||||||| |||||||||    
T  39906610 taagcctattttctaccaacttttctactataggtgctaccc 39906651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 40139221 - 40139270
Alignment:
Q  156 tttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||| |||| ||||||||||||||||| |||| ||| ||||||||    
T  40139221 tttctaatcttatcccgtctagtcttaccacacatcccacacaacatcct 40139270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 41948587 - 41948514
Alignment:
Q  60 aggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||| |||| ||||| | |||||| ||||||||||| |||| | ||||||||||| | |||||||||| ||||    
T  41948587 aggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttctattgtaagtgctacgccaa 41948514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 12841515 - 12841555
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  12841515 taagcctattttctaccaacttttctactataggtgctacc 12841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 30200261 - 30200313
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    |||||||||||| |||| | |||| |||||||||| |||||||| ||||||||    
T  30200261 tcatttctaatcatatcccatctaatcttaccacacatccaacacaacatcct 30200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 35906441 - 35906481
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  35906441 taagcctattttctaccaacttttctactataggtgctacc 35906481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 45205150 - 45205255
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||| |||||||| || ||||||| |||||||| ||||| ||||||||||||||| || |    
T  45205150 tcattcctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctccgctacgcttacttgattctcgtgttggttcttaactgccc 45205249  T
Q  253 aacact 258  Q
    ||||||    
T  45205250 aacact 45205255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 11389702 - 11389595
Alignment:
Q  153 tcatttctaatcctatctc--gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgc 250  Q
    |||||||||||||||| ||  ||||||| |||||||| ||||||   |||||||| || || |||| |||||||||||||| | ||||||||||||||||    
T  11389702 tcatttctaatcctatatcccgtctagttttaccacacatccaatccaacatcctcatctctgctacgcttactttattctcgagttggttcttaaccgc 11389603  T
Q  251 tcaacact 258  Q
     |||||||    
T  11389602 ccaacact 11389595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 54470336 - 54470205
Alignment:
Q  2 tgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttc 101  Q
    ||||||| ||||| ||||||  ||||||  ||| ||| ||| |||||| | |||||||| ||| |||| ||||| | |||||| ||||||| ||| ||||    
T  54470336 tgcctctagtaatttgactactctccatttgatttactctccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttc 54470237  T
Q  102 taacatcttttctactataagtgctaccccaa 133  Q
     | |||||||||||||||| ||||||||||||    
T  54470236 caccatcttttctactataggtgctaccccaa 54470205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 10209149 - 10209032
Alignment:
Q  16 tgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttcta 115  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||| ||||||| |||| ||||| | |||||| |  ||||  || |||||  |||||||||||    
T  10209149 tgactctcctccatctgatctactctccttactaaaaaattcacaggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttcta 10209050  T
Q  116 ctataagtgctaccccaa 133  Q
    ||||| || |||||||||    
T  10209049 ctataggttctaccccaa 10209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 50662369 - 50662264
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||| ||||||||||| | ||||||||||||| |||| ||| ||||||||  | ||||||| ||||| | ||||  ||||||||||||| ||| |||    
T  50662369 tcatttccaatcctatctcatatagtcttaccacacatcctacacaacatcctcgtctccgctacgcttattatatttatgtgttggttcttcaccactc 50662270  T
Q  253 aacact 258  Q
    ||||||    
T  50662269 aacact 50662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 258
Target Start/End: Complemental strand, 31459082 - 31458903
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagt 178  Q
    |||||| || ||||||||||||||| |||||||||||||||| |||||||| | |            ||||  |||||| |||||||||||  |||||||    
T  31459082 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcgactctgtctctctaatggtatcattcctaatcctatcatgtctagt 31458983  T
Q  179 cttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||  | |||||  |||||||| || |  ||||  ||||||||||| | ||||||||||||||| || |||||||    
T  31458982 cttaccactcaaccaacgcaacatcctcatctgtgctacacttactttattttcgtgttggttcttaactgcccaacact 31458903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 35690284 - 35690189
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaacc 248  Q
    ||||| ||||||||||||||||||||||||| ||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||||||||||||    
T  35690284 tcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatctcggctacacttacttgattctcatgttggttcttaacc 35690189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 17900467 - 17900385
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttat 228  Q
    |||||| |||||||||||  |||| | ||||||||||||||| |||||||  |||||||| ||||| |||| |||||||||||    
T  17900467 aatgtcgtcatttctaattttatcccatctagtcttaccacacatccaacgcaacatcctcatttctgctacgcttactttat 17900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 18499858 - 18499762
Alignment:
Q  148 tgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||| |||||| || | |||||||||||||||||| |||| |||||||| |||||| | ||||| |||||||||||  |||  | ||||||||||||    
T  18499858 tgtcgtcatttttagttctatctcgtctagtcttatcacacatccaacacaacatcttcatttctgctatgcttaccgtatgttcgtgttggttctt 18499762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 45094463 - 45094555
Alignment:
Q  152 atcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||||||||||| |||||| ||||||| |||| ||| |||||||| |||||||| || ||| ||||||||| |||| ||   |||||||||||    
T  45094463 atcatttctaatactatcttgtctagtattactacacatccaacacaacatcctcatctccactatgcttattttaatcgcatgttggttctt 45094555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 20192103 - 20192033
Alignment:
Q  61 ggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||| |||| ||||| | ||||||||  ||||| ||||||||| || ||||||||||||||||||||||||    
T  20192103 ggtcttctctctacatgcccaaactatctaagcttattttctatcaacttttctactataagtgctacccc 20192033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 23906603 - 23906709
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| |||||||||| ||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  23906603 tcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 23906702  T
Q  253 aacactt 259  Q
    |||||||    
T  23906703 aacactt 23906709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29398948 - 29398822
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || || ||||||||||| ||||| ||||| ||| | |||| | ||| || ||||| |||| ||||| | |||||| || ||||| ||||||    
T  29398948 ctgcctctagtgatttgactatcctctatccggtctactctcctcactacagaatctataggtcttctctctacatgcccaaaccacataagcatatttt 29398849  T
Q  101 ctaacatcttttctactataagtgcta 127  Q
    | | |||||||||||| ||| ||||||    
T  29398848 ccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 41009652 - 41009774
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||||||| |  |||||||||||||    |||||||  |||||||| ||||||||||  ||||||| |||||  |||||| |||||| ||| |    
T  41009652 tcatttctaatcctaccatgtctagtcttaccgatcatccaacgcaacatcctcatttccgctacacttacttgattctcatgttggctcttaatcgccc 41009751  T
Q  253 aacactttgttttatacaacatc 275  Q
    ||||||  ||  |||||||||||    
T  41009752 aacactccgtactatacaacatc 41009774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 50471604 - 50471526
Alignment:
Q  53 aatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||| ||||||| |||| ||||| | |||||| |||||| |||| |||| | ||||||||||||||| |||||||||||    
T  50471604 aattcacaggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctactattagtgctacccc 50471526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 12494730 - 12494625
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  12494730 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 12494631  T
Q  253 aacact 258  Q
    ||||||    
T  12494630 aacact 12494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 26037657 - 26037786
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    ||||||||| ||| |||||| ||||||||| ||||||| ||  |||| |    ||||||||||| |||| ||| |  | ||||| |  ||||||||||||    
T  26037657 ctgcctcttttaacctgactctcctccatctgatctactcttcttacgacggcatttacaggtcttctctctataatatcaaaccatctaagcctatttt 26037756  T
Q  101 ctaacatcttttctactataagtgctaccc 130  Q
    ||| || ||||||||||||| |||||||||    
T  26037757 ctaccaacttttctactataggtgctaccc 26037786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 28351686 - 28351641
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattacta 49  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  28351686 cctcttgtaatctgactatcctccatctgatctactctccttacta 28351641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 28497600 - 28497488
Alignment:
Q  20 tatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactat 119  Q
    ||||||||||| ||||||| ||| |||||| | ||| |||| ||| |||| ||||| | |||||| || ||||||| ||||| |  |||||||||||||     
T  28497600 tatcctccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaa 28497502  T
Q  120 aagtgctaccccaa 133  Q
    | ||||||||||||    
T  28497501 aggtgctaccccaa 28497488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 31960116 - 31960221
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  31960116 tcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 31960215  T
Q  253 aacact 258  Q
    ||||||    
T  31960216 aacact 31960221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 43433898 - 43433793
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| |||||||||| ||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  43433898 tcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 43433799  T
Q  253 aacact 258  Q
    ||||||    
T  43433798 aacact 43433793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 2588961 - 2588909
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||||||||| | ||||||||||||||| |||||||  ||||||||    
T  2588961 tcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcct 2588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 20105773 - 20105813
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatcca 193  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  20105773 tcatttctaatcatatctcgtctagtcttaccacacatcca 20105813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 30621448 - 30621488
Alignment:
Q  93 cctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  30621448 cctattttccaccatcttttctactataagtgctaccccaa 30621488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 30853384 - 30853308
Alignment:
Q  165 ctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggtt 241  Q
    |||||| |||||||||||||| | |||||||| |||||| | || ||||||  ||||| |||||||| |||||||||    
T  30853384 ctatcttgtctagtcttaccatacatccaacacaacatcttcatctccgctgcgcttattttattctcgtgttggtt 30853308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 45185319 - 45185403
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgtt 237  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||| || || || ||  ||||||  ||||||||||||| |||||    
T  45185319 tcatttctaattctatctcatctagtcttactacacatccaacacaatattcttatcaccgctacacttactttattctcgtgtt 45185403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 45423599 - 45423547
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||| ||||| ||||||||||||||||| | |||||| ||||||||    
T  45423599 tcatttctaattctatcccgtctagtcttaccacacaaccaacacaacatcct 45423547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 51252761 - 51252813
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||| || |||||    
T  51252761 tcatttctaatcctatctcgtctagtcttacgacacatctaacacaaaatcct 51252813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 183
Target Start/End: Complemental strand, 20998993 - 20998962
Alignment:
Q  152 atcatttctaatcctatctcgtctagtcttac 183  Q
    ||||||||||||||||||||||||||||||||    
T  20998993 atcatttctaatcctatctcgtctagtcttac 20998962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 44047533 - 44047632
Alignment:
Q  34 tctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||| |||||| ||||| ||| |||||||| |  | ||||| | |||||| || ||||||||  ||||| || ||||||||||||| ||||||||||||    
T  44047533 tctactctcattgctaaagaatctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaa 44047632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 44860833 - 44860758
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttatt 229  Q
    ||||||||||| |||  | ||||||||||||||| |||||||| |||||||| ||||| ||||  |||| ||||||    
T  44860833 catttctaatcttattccatctagtcttaccacacatccaacacaacatcctcatttctgctacacttaatttatt 44860758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 47611844 - 47611741
Alignment:
Q  14 tctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttc 113  Q
    ||||||| ||||||||| ||| ||| ||| ||| || ||||| |  ||||| |||| ||||| | |||||| || ||||||||||||| | |||||||||    
T  47611844 tctgactctcctccatctgatttactctccttattacaaaatctctaggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttc 47611745  T
Q  114 tact 117  Q
    ||||    
T  47611744 tact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 50680717 - 50680614
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaa 254  Q
    ||||| |||||||| || | ||||||| | ||| || ||||| ||||||||  | |||||||| |||| | ||||| ||||||||||||| ||| |||||    
T  50680717 atttccaatcctatgtcatatagtcttgctacacattcaacacaacatcctcgtctccgctatacttattatattcgtgtgttggttcttcaccactcaa 50680618  T
Q  255 cact 258  Q
    ||||    
T  50680617 cact 50680614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 52280566 - 52280605
Alignment:
Q  218 gcttactttattcttgtgttggttcttaaccgctcaacac 257  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  52280566 gcttactttattctggtgttggttcttaaccgcacaacac 52280605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 436271 - 436229
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  436271 taagcctattttctaccaacttttctactataggtgctacccc 436229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 12494792 - 12494750
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  12494792 taagcctattttctaccaacttttctactataggtgctacccc 12494750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 21106964 - 21106851
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgct--atgcttactttattcttgtgttggttcttaaccgc 250  Q
    ||||||||||| ||||| ||||||||||||||||| ||| |||  |||||||| ||  || ||  |  |||| |||||| |  |||||||||||||||||    
T  21106964 tcatttctaattctatcacgtctagtcttaccacacatcgaacccaacatcctcatcaccactacactcttattttattgtcatgttggttcttaaccgc 21106865  T
Q  251 tcaacactttgttt 264  Q
     ||||||| |||||    
T  21106864 ccaacactctgttt 21106851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 27450419 - 27450461
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  27450419 taagcctattttctaccaacttttctactataggtgctacccc 27450461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 27450494 - 27450580
Alignment:
Q  172 gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    |||||||||||||||  ||||| |  |||||||| || |||||||  ||||||||| ||| ||||||| ||||||| || |||||||    
T  27450494 gtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaactgcccaacact 27450580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 31960054 - 31960096
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  31960054 taagcctattttctaccaacttttctactataggtgctacccc 31960096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 33227251 - 33227209
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  33227251 taagcctattttctaccaacttttctactataggtgctacccc 33227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 43433966 - 43433924
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  43433966 taagcctattttctaccaacttttctactataggtgctacccc 43433924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 51421782 - 51421728
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || ||||||||||||||| |||||  ||||||||| ||||||||||||    
T  51421782 ccaaaccacctaagcctattttctatcatctaatctactatatgtgctaccccaa 51421728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 52569755 - 52569797
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  52569755 taagcctattttctaccaacttttctactataggtgctacccc 52569797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 7092385 - 7092498
Alignment:
Q  14 tctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttc 113  Q
    ||||||| || |||||| ||||||| ||   ||||| || || |||| ||| |||| ||| | | |||||| |||||| ||||||||||| ||| |||||    
T  7092385 tctgactctcatccatctgatctactcttcatactataacatctacatgtcttctctctatatgcccaaaccacttaaacctattttctatcatattttc 7092484  T
Q  114 tactataagtgcta 127  Q
    ||||||| ||||||    
T  7092485 tactataggtgcta 7092498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 44360063 - 44360014
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacat 202  Q
    ||||||||||| |||||||| |||||| ||||||| |||||||| |||||    
T  44360063 tcatttctaattctatctcgcctagtcctaccacacatccaacacaacat 44360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 45569348 - 45569393
Alignment:
Q  199 acatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||| || ||||||||||||| |||||||| ||||||||||||    
T  45569348 acatcctcatctccgctatgcttattttattctcgtgttggttctt 45569393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 48622748 - 48622825
Alignment:
Q  54 atttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| |||| |||| ||||| | |||||| |  ||||||||||||||| || ||||||||||||  ||||||||||    
T  48622748 atttacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctacccc 48622825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 50286951 - 50286846
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  ||| |||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  50286951 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacttcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 50286852  T
Q  253 aacact 258  Q
    ||||||    
T  50286851 aacact 50286846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 52569817 - 52569922
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  ||||||||||||| |  |||||||| |||||||| || || ||||  ||||||| |||||  |||||  |||||||||  |    
T  52569817 tcattcctaatcctatcctgtctagtcttacccctcatccaacacaacatcctgatctctgctacacttacttgattctcatgttgactcttaaccgaac 52569916  T
Q  253 aacact 258  Q
    ||||||    
T  52569917 aacact 52569922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 4440834 - 4440738
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgc 250  Q
    |||| |||||||||||  |||||||||||||||  ||| |||  ||||||||||| || ||||  ||||||| |||||  |||||  ||||||||||    
T  4440834 cattcctaatcctatcatgtctagtcttaccactcatcgaacgcaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccgc 4440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 20591546 - 20591582
Alignment:
Q  95 tattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||| || ||||||||||||||||||||||||    
T  20591546 tattttctaccaacttttctactataagtgctacccc 20591582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 34233338 - 34233426
Alignment:
Q  156 tttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||||||||||||| | |||||||||| |||| |||||||| |||||| | || ||| |||  ||||  ||||||  ||||||||||||    
T  34233338 tttctaatcctatcacatctagtcttatcacacatccaacacaacatcatcatctccactacacttatcttattcccgtgttggttctt 34233426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 35555856 - 35555928
Alignment:
Q  58 acaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||||| |||| ||| | | |||||| || |||| ||| |||||| |||||||||||||||| |||||||||    
T  35555856 acaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 35555928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 37797894 - 37797854
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  37797894 taagcctattttctaccaacttttctactataggtgctacc 37797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 49987487 - 49987439
Alignment:
Q  72 tacaggaccaaactacttaagcctattttctaacatcttttctactata 120  Q
    |||| |||||||| || ||||||||||||| | ||||||||||||||||    
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactata 49987439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 53707836 - 53707796
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  53707836 taagcctattttctaccaacttttctactataggtgctacc 53707796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 48431561 - 48431689
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||||||||| |||||||||||||| |||| || ||| |||||| ||||| |||| ||| |||| ||||| | |||||| || ||||||||||||| |    
T  48431561 cctcttgtaatccgactatcctccatctgatcaactctctttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttcca 48431660  T
Q  104 acatcttttctactataagtgctacccca 132  Q
     |||||||||||||||| | |||||||||    
T  48431661 ccatcttttctactataggggctacccca 48431689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 9599696 - 9599818
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| |||| ||||||||||||||||  |||||||| |||||||| || || |||| |||||||| ||| ||||||||||||| |||||| |    
T  9599696 tcattcctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgctacgcttacttgattattgtgttggttctcaaccgcac 9599795  T
Q  253 aacactttgttttatacaacatc 275  Q
    |||||||||| | |||| |||||    
T  9599796 aacactttgtatcataccacatc 9599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 9509445 - 9509316
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||| |||| ||||| ||||||||| ||||||| || | |||||||  || ||| |||| |||| ||||| | ||||||||| |||||||||||| ||    
T  9509445 cctcttctaatatgactctcctccatctgatctactctaagtactaaagcatataccggtcttctctctacatgcccaaactacctaagcctatttttta 9509346  T
Q  104 acatcttttctactataagtgctaccccaa 133  Q
     |||||||||||||||| ||||||||||||    
T  9509345 ccatcttttctactataggtgctaccccaa 9509316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 2544714 - 2544597
Alignment:
Q  16 tgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttcta 115  Q
    ||||||||||||||| ||||||| ||| |||||| | ||| || ||||| |||| ||||| | |||||| || |||| || ||||| | |||||||||||    
T  2544714 tgactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttcta 2544615  T
Q  116 ctataagtgctaccccaa 133  Q
    ||||| ||||||||||||    
T  2544614 ctataggtgctaccccaa 2544597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 19936502 - 19936397
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||| ||||||| | ||||||||||||||  |||||||| ||||| || || ||||||||||||| || |||||  ||||||||||||||||| |    
T  19936502 tcattcctattcctatcccatctagtcttaccactcatccaacacaacattctcatctccgctatgcttatttgattctcatgttggttcttaaccgccc 19936403  T
Q  253 aacact 258  Q
    ||||||    
T  19936402 aacact 19936397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 52442806 - 52442891
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttg 238  Q
    |||||||||||| ||||| |||||||||||||||| |||||||| |||||||| || || |||| ||||| |||||| ||||||||    
T  52442806 tcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgctacgcttaatttatttttgtgttg 52442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 16142195 - 16142274
Alignment:
Q  162 atcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggtt 241  Q
    |||||||| ||||||||||||||||| ||||||||||||||| | |||||| ||||||||| || ||||| || ||||||    
T  16142195 atcctatcccgtctagtcttaccacacatccaacataacatcttcatttccactatgcttatttgattctcgtattggtt 16142274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 8391752 - 8391647
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| || ||||||||||||  |||||||| |||||| | || |||||||  ||||||||| ||| ||||||  |||||||||| |    
T  8391752 tcattcctaatcctatcttgtgtagtcttaccactcatccaacacaacatcttcatctccgctacacttactttactctcgtgttgactcttaaccgccc 8391653  T
Q  253 aacact 258  Q
    ||||||    
T  8391652 aacact 8391647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 40416489 - 40416369
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    ||||||||||||| |||| ||||||| ||| |||||| ||||| ||||| || |||| ||||| | | |||| || |||||||  |||| | ||||||||    
T  40416489 atctgactatcctgcatctgatctactctccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatctttt 40416390  T
Q  113 ctactataagtgctaccccaa 133  Q
    |||||||| ||||||| ||||    
T  40416389 ctactataggtgctactccaa 40416369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 4379985 - 4379894
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||||||||||| |||||  ||||||||||||||| |||||||| |||||||| || || |||| ||||  |||||| | ||||||||||||    
T  4379985 tcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctcagctaagctttatttattttcgtgttggttctt 4379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 5338854 - 5338727
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || |||||| ||||||||||| ||||||| ||| ||||||||  || |||||||| |||| || || | |||||| || |||||  | |||    
T  5338854 ctgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagttt 5338755  T
Q  101 ctaacatcttttctactataagtgctac 128  Q
    | | |||||||||||||||| |||||||    
T  5338754 ccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 1661406 - 1661304
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||||||||| | |||||||||| || | || ||||| |||||| | || || |||||||||| |||||||| ||||||||| || ||||| |    
T  1661406 tcatttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgctatgcttattttattctcgtgttggtttttcaccgccc 1661307  T
Q  253 aac 255  Q
    |||    
T  1661306 aac 1661304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 26016398 - 26016308
Alignment:
Q  172 gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgt 262  Q
    |||||||||||||||| |||||||  |||||||| || || |||| |||||||||||  |  ||||||||||| ||||| |||||||||||    
T  26016398 gtctagtcttaccacacatccaacgcaacatcctcatctctgctacgcttactttatgttcttgttggttctttaccgcccaacactttgt 26016308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 32404681 - 32404807
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||||| || |||||||||||||||   ||||| ||| |||||| | ||| |||||||| |||| |||||   |||||| || ||||||||||||| |    
T  32404681 cctcttgtgatatgactatcctccatcttctctactctccttactatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttcca 32404780  T
Q  104 acatcttttctactataagtgctaccc 130  Q
     |||||||| ||||||| ||| |||||    
T  32404781 ccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 696249 - 696144
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  ||||| |  |||||||| || |||||||  ||||||||| ||| ||||||| |||||||| | |    
T  696249 tcattcctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccaccc 696150  T
Q  253 aacact 258  Q
    ||||||    
T  696149 aacact 696144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 9592714 - 9592609
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  ||||| ||||||||||| |    
T  9592714 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgattcttaaccgccc 9592615  T
Q  253 aacact 258  Q
    ||||||    
T  9592614 aacact 9592609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 16822321 - 16822380
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttcc 212  Q
    ||||||||||||||||||  |||||| |||||||| |||||||| |||||||| ||||||    
T  16822321 tcatttctaatcctatcttatctagtattaccacacatccaacacaacatcctcatttcc 16822380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 35828714 - 35828829
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||||||  ||||| | ||| |||||| | ||| || ||||| |||| ||||| | |||||| || ||| ||||||||| | ||||||||    
T  35828714 atctgactatcctccatatgatcttctctccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatctttt 35828813  T
Q  113 ctactataagtgctac 128  Q
    |||| ||| |||||||    
T  35828814 ctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 11331402 - 11331488
Alignment:
Q  189 atccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatc 275  Q
    |||||| ||||| |||| || ||||||||||| |||| |||||||||||||||| || |||| ||||||| |||   ||||||||||    
T  11331402 atccaatataacttcctcatctccgctatgctaacttgattcttgtgttggttcctagccgcacaacactctgtaccatacaacatc 11331488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 11489423 - 11489509
Alignment:
Q  189 atccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatc 275  Q
    |||||| ||||| |||| || ||||||||||| |||| |||||||||||||||| || |||| ||||||| |||   ||||||||||    
T  11489423 atccaatataacttcctcatctccgctatgctaacttgattcttgtgttggttcctagccgcacaacactctgtaccatacaacatc 11489509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 34827404 - 34827526
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||| ||| |||||||||||||||||  |||||||| |||||||| || || | ||  |||| ||  || | |||||||||||||||||  |    
T  34827404 tcatttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctcagttacacttatttgtttttcgtgttggttcttaaccgaac 34827503  T
Q  253 aacactttgttttatacaacatc 275  Q
    |||||| |||   ||||||||||    
T  34827504 aacactctgtaccatacaacatc 34827526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 1210725 - 1210620
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  1210725 tcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 1210626  T
Q  253 aacact 258  Q
    ||||||    
T  1210625 aacact 1210620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 15085914 - 15085809
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||   ||||||||||||||   |||| |  |||||||| || |||||||  ||||||||| ||| ||||||| |||||||||| |    
T  15085914 tcattcctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccgccc 15085815  T
Q  253 aacact 258  Q
    ||||||    
T  15085814 aacact 15085809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 29578233 - 29578310
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattc 230  Q
    |||||||||||| |||| | |||| | |||||||| |||||||| ||||| || |||||| ||||||||| |||||||    
T  29578233 tcatttctaatcttatcgcttctattattaccacacatccaacacaacatgctcatttccactatgcttattttattc 29578310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 30202432 - 30202537
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  30202432 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 30202531  T
Q  253 aacact 258  Q
    ||||||    
T  30202532 aacact 30202537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 18469299 - 18469366
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||||| | | ||||||||| ||| ||||||||||| |||||| ||||||||| ||| ||||||||    
T  18469299 tctcactatatgtccaaactacctaatcctattttctatcatcttctctactataggtgttaccccaa 18469366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 40920841 - 40920880
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaa 194  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  40920841 atttctaatcctatctcgtctaatcttaccacacatccaa 40920880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 696311 - 696269
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  696311 taagcctattttctaccaacttttctactataggtgctacccc 696269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 1210787 - 1210745
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  1210787 taagcctattttctaccaacttttctactataggtgctacccc 1210745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 1661470 - 1661428
Alignment:
Q  91 agcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||||||| | |||||||||||||||| ||||||||||||    
T  1661470 agcctattttccaccatcttttctactataggtgctaccccaa 1661428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 4001695 - 4001737
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  4001695 taagcctattttctaccaacttttctactataggtgctacccc 4001737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 8671960 - 8671918
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  8671960 taagcctattttctaccaacttttctactataggtgctacccc 8671918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 15085976 - 15085934
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  15085976 taagcctattttctaccaacttttctactataggtgctacccc 15085934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 18469382 - 18469504
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| ||||  |||||||||||||||  || ||||  | |||| | || ||||||| | |||||| ||||| |||||||||||||||||| |    
T  18469382 tcattcctaatcatatcatgtctagtcttaccactcatacaacgcagcatcgtcatctccgctacgtttacttgattctcgtgttggttcttaaccgccc 18469481  T
Q  253 aacactttgttttatacaacatc 275  Q
    |  |||| || | ||||||||||    
T  18469482 agtacttagtatcatacaacatc 18469504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 22090067 - 22089969
Alignment:
Q  160 taatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||  |||||||||||||||  |||||||| | |||||| || || ||||  ||||||| |||||  |||||  |||||||||| |||||||    
T  22090067 taatcctatcctgtctagtcttaccactcatccaacacagcatcctcatctctgctacacttacttgattctcatgttgactcttaaccgcccaacact 22089969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 22090138 - 22090096
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  22090138 taagcctattttctaccaacttttctactataggtgctacccc 22090096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 30202342 - 30202412
Alignment:
Q  61 ggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||| |||| ||||| |||||||| |  ||||||||||||||| || | ||||||||||| ||||||||||    
T  30202342 ggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgctacccc 30202412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 32082985 - 32083027
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  32082985 taagcctattttctaccaacttttctactataggtgctacccc 32083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 37463103 - 37463157
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || |||||||||||||||   |||||||||||||| ||||||||||||    
T  37463103 ccaaaccacctaagcctattttctactgtcttttctactataggtgctaccccaa 37463157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 38807977 - 38808054
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattct 231  Q
    ||||||||||| ||||| ||||| ||||||||||  |||||||| |||||||| || ||||| | |||||||| |||||    
T  38807977 tcatttctaattctatcccgtctggtcttaccac-tatccaacacaacatcctcatatccgccacgcttacttaattct 38808054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 39422343 - 39422465
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||| ||||||| | || || ||||||| ||| |||| ||||| || ||||| |||| |||||||| |   | |||||| ||||| |||| ||    
T  39422343 tcatttctaattctatctcatataatcctaccacacatctaacacaacattctcatttcagctacgcttacttaaagttcgtgttgtttcttcaccgttc 39422442  T
Q  253 aacactttgttttatacaacatc 275  Q
    |||||||| | | ||||||||||    
T  39422443 aacactttatctcatacaacatc 39422465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 41611857 - 41611807
Alignment:
Q  80 caaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||| || ||| ||||||||||| ||||||||||| ||||||||||||||    
T  41611857 caaaccacataaacctattttctaccatcttttctaatataagtgctaccc 41611807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 49347695 - 49347801
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || |  ||||  ||||||| |||||  |||||  |||||||||| |    
T  49347695 tcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctttgctacacttacttgattctcatgttgactcttaaccgccc 49347794  T
Q  253 aacactt 259  Q
    |||||||    
T  49347795 aacactt 49347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 32083047 - 32083152
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||| |  |||||||||||||||  ||||| |  |||||||| || |||||||  | ||||||| ||| ||||||  |||||||||| |    
T  32083047 tcattcctaatcctaccctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacatactttactctcgtgttgactcttaaccgccc 32083146  T
Q  253 aacact 258  Q
    ||||||    
T  32083147 aacact 32083152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 39140647 - 39140518
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||| |||||||||| || |||||| ||||||| ||   ||||| || || ||  |||| |||| ||||| | |||||| || |||||| ||||| |     
T  39140647 cctcttctaatctgactctcatccatctgatctactcttcgtactacaacatgtatcggtcttctctctacatgcccaaaccacctaagccaattttttg 39140548  T
Q  104 acatcttttctactataagtgctaccccaa 133  Q
     |||||||||||||||| ||||||| ||||    
T  39140547 ccatcttttctactataggtgctacgccaa 39140518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 43423806 - 43423717
Alignment:
Q  44 ttactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| | ||| |||| ||| |||| ||||| | |||||| || |||||||| |||| | |||||||||||||||| ||| ||||||||    
T  43423806 ttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaa 43423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 51602098 - 51602057
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||||||||||||| || ||||||||||||| |||||||||    
T  51602098 taagcctattttctaccaacttttctactataggtgctaccc 51602057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 8671900 - 8671804
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccg 249  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||    
T  8671900 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatccttatctctgctacacttacttgattctcatgttgactcttaaccg 8671804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8796339 - 8796291
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattacta 49  Q
    |||||||| || |||||||||||||||||||||| ||| ||| ||||||    
T  8796339 ctgcctctagtgatctgactatcctccatccgatttactctccttacta 8796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 9599634 - 9599678
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  9599634 taagcctattttctaccatcttttctactataggtgttactccaa 9599678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 14226130 - 14226198
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgctta 222  Q
    ||||||||||||||||  |||||| ||||||||| |||||||| || |||||  | || ||||||||||    
T  14226130 catttctaatcctatcatgtctagccttaccacacatccaacacaaaatcctcgtatctgctatgctta 14226198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 17815454 - 17815403
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||    
T  17815454 tcatttctaatgctatcccgtctagtc-taccacacatccaacacaacatcct 17815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 52561851 - 52561895
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||||||||||| |||| ||||||||| | ||||||||||||    
T  52561851 taagcctattttctatcatcatttctactaaaggtgctaccccaa 52561895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 23714553 - 23714651
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||||| |||||| ||||||||| | |||||||||||||||| |||||||| ||||| ||||| || |||||||||| |||||| | ||||||||||||    
T  23714553 aatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttggttctt 23714651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 24102225 - 24102323
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    |||||| |||||| ||||||||| | |||||||||||||||| |||||||| ||||| ||||| || |||||||||| |||||| | ||||||||||||    
T  24102225 aatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttggttctt 24102323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 12141671 - 12141542
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    ||||||||||| ||||||||||| ||| ||||||| ||| |||||| | ||| |||||||| |||  ||||  | |||||| || ||||||| ||||| |    
T  12141671 cctcttgtaatttgactatcctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttcca 12141572  T
Q  104 acatcttttctactataagtgctaccccaa 133  Q
     |||||||||||||||| ||||||||||||    
T  12141571 ccatcttttctactataggtgctaccccaa 12141542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 41763343 - 41763448
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| |||||||||||||||  ||||| |  |||||||| || |||||||  ||||||||| ||| |||||||||||||||||| |    
T  41763343 tcattcctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctcatctccgctacacttactttactctcgtgttggttcttaaccgccc 41763442  T
Q  253 aacact 258  Q
    ||||||    
T  41763443 aacact 41763448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 38429864 - 38429759
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || |||||||  |||||| || ||| |||||||||||||||||| |    
T  38429864 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttactctactctcgtgttggttcttaaccgccc 38429765  T
Q  253 aacact 258  Q
    ||||||    
T  38429764 aacact 38429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 43752111 - 43752231
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||| ||||||||||| ||||||| |||  ||||| | ||| || ||||| |||| ||||| | |||||  || ||||||||||||||| || |||||    
T  43752111 atctgagtatcctccatctgatctactctccctactacataatctataggtcttctctctacatgtccaaatcacctaagcctattttctaccacctttt 43752210  T
Q  113 ctactataagtgctaccccaa 133  Q
    |||||||| ||||||||||||    
T  43752211 ctactataggtgctaccccaa 43752231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 18959029 - 18958905
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacagg----accaaactacttaagcctattttctaacatc 108  Q
    |||||||||||||||||| ||||||| ||| |||||| ||||  | |||||| |||| || || |    ||||||| || ||||||||||||| | ||||    
T  18959029 atctgactatcctccatctgatctactctccttactacaaaagctgcaggtcttctctctgcatgcccaaccaaaccacctaagcctattttccaccatc 18958930  T
Q  109 ttttctactataagtgctaccccaa 133  Q
    |||||||||||| ||||||||||||    
T  18958929 ttttctactataggtgctaccccaa 18958905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 7825338 - 7825260
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattct 231  Q
    |||||||||||| ||||  |||||||||||||||| |||||||  ||||||||||| || |||| ||||||||||||||    
T  7825338 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgctacgcttactttattct 7825260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 41197530 - 41197639
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  ||| | |  |||||||| || |||||||  ||||||||| ||| ||||||| |||||||||| |    
T  41197530 tcattcctaatcctatcatgtctagtcttaccactcatctagcgcaacatcctcatctccgctacacttactttactctcgtgttggctcttaaccgccc 41197629  T
Q  253 aacactttgt 262  Q
    ||||||||||    
T  41197630 aacactttgt 41197639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 45077727 - 45077650
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattct 231  Q
    |||||||||| |||||| |||||||||||||||| |||||||  |||||||| || || |||||||||| ||||||||    
T  45077727 catttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctcagctatgcttattttattct 45077650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 19337174 - 19337245
Alignment:
Q  176 agtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaac 247  Q
    |||||||||||| ||||||| ||||||||| || ||| ||| ||||| |||||||| |||||| ||||||||    
T  19337174 agtcttaccacacatccaacgtaacatcctcatctccactacgcttattttattctcgtgttgattcttaac 19337245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 3481259 - 3481142
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||||||| ||||||| ||| || ||| | ||| || ||||| |||| ||||| | |||||| || ||||||| ||||| | ||||||      
T  3481259 atctgactatcctccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaaccacctaagcctgttttccaccatctt-- 3481162  T
Q  113 ctactataagtgctaccccaa 133  Q
     ||||||| ||||||||||||    
T  3481161 -tactataggtgctaccccaa 3481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 8180760 - 8180655
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||| |||||||| || || ||||  ||||||| |||||  |||||  |||||||||  |    
T  8180760 tcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgtcc 8180661  T
Q  253 aacact 258  Q
    ||||||    
T  8180660 aacact 8180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 25834754 - 25834681
Alignment:
Q  58 acaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||| |||| ||||| | |||||| |  ||||||||||||||| || ||||||||||||| ||||||||||    
T  25834754 acaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 25834681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 36183431 - 36183326
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  36183431 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 36183332  T
Q  253 aacact 258  Q
    ||||||    
T  36183331 aacact 36183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 9556670 - 9556722
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    |||||||||||| |||| |||||| |||||||||| |||||||| ||||||||    
T  9556670 tcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcct 9556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 12734681 - 12734629
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||||||||||| ||||||||||||||||  ||||| || ||||||||    
T  12734681 tcatttctaatcctatcccgtctagtcttaccactcatccagcacaacatcct 12734629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 13339455 - 13339503
Alignment:
Q  282 ttttaatatatacttcatattttaaaataattgaaataatatcatgata 330  Q
    ||||||||||||||| | |||||| || |||||||||||||||||||||    
T  13339455 ttttaatatatacttgagattttagaagaattgaaataatatcatgata 13339503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 21834531 - 21834424
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaa 254  Q
    |||||||||| |||||| ||||||||||||||| |||||||  |||||| | || ||  | |  ||||||||||||| ||||||||| ||||| ||||||    
T  21834531 atttctaatcttatctcatctagtcttaccacacatccaactcaacatctttatctcaac-acacttactttattctcgtgttggttattaacagctcaa 21834433  T
Q  255 cactttgtt 263  Q
     ||| ||||    
T  21834432 tactatgtt 21834424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 41763250 - 41763325
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccca 132  Q
    |||||||| |||| || || | |||||| || ||||||||||||||| || ||||||||||||| ||| |||||||    
T  41763250 tacaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttacccca 41763325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 6219019 - 6218965
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || |||||||||| || |  ||||||||||||||||||||||||||||    
T  6219019 ccaaaccacctaagcctattatccactatcttttctactataagtgctaccccaa 6218965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 11412773 - 11412719
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || ||||||||||||| | ||| |||||||||||| ||||||||||||    
T  11412773 ccaaacaacctaagcctattttccaccatattttctactataggtgctaccccaa 11412719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 12882270 - 12882324
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || ||||||||||||||| ||||||||||| |||| ||||| ||||||    
T  12882270 ccaaaccacctaagcctattttctaccatcttttctagtataggtgctgccccaa 12882324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 37282051 - 37281965
Alignment:
Q  189 atccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactttgttttatacaacatc 275  Q
    |||||||| |||||||| || ||  |||| ||||||| ||||| || ||| |||||||||||| |||||| ||| | ||||||||||    
T  37282051 atccaacacaacatcctcatctcaactatacttacttgattctcgtattgattcttaaccgcttaacactctgtatcatacaacatc 37281965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 43238333 - 43238375
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  43238333 taagcctattttctaccaacttttctactataggtgctacccc 43238375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 4807565 - 4807452
Alignment:
Q  160 taatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactt 259  Q
    ||||||||||  ||||| ||||||||   |||||||  |||||||| || || ||||  ||||||| |||||  |||||  ||||||||||||||||||     
T  4807565 taatcctatcatgtctattcttaccattcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttgactcttaaccgctcaacactc 4807466  T
Q  260 tgttttatacaaca 273  Q
    ||| | ||||||||    
T  4807465 tgtgtcatacaaca 4807452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 8180853 - 8180780
Alignment:
Q  58 acaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||| |||| ||||| | |||||| |  ||||| ||||||||| || ||||||||||||| ||||||||||    
T  8180853 acaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctacccc 8180780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 16097292 - 16097388
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccg 249  Q
    |||||||||||| |||| | ||||||||||||||  |||||    |||||||| || |||||||  ||||||| |||||  |||||| |||||||||    
T  16097292 tcatttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctcatctccgctacacttacttgattctcatgttggctcttaaccg 16097388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 608139 - 608034
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||   ||||||||||||||  |||||||  |||||||| || |||||||  ||||||||||||| ||||||| |||||||||| |    
T  608139 tcattcctaatcctatcctatctagtcttaccactcatccaacggaacatcctcatctccgctacacttactttattctcgtgttggctcttaaccgccc 608040  T
Q  253 aacact 258  Q
    ||||||    
T  608039 aacact 608034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 28027127 - 28027232
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||||  | ||||||||||||||  |||||||||||||||||  | || ||||||||||||| |||||  ||||||||||||||| | |    
T  28027127 tcattcctaatcctatgccatctagtcttaccactcatccaacataacatcctcgtctctgctatgcttacttgattctcatgttggttcttaacctccc 28027226  T
Q  253 aacact 258  Q
    ||||||    
T  28027227 aacact 28027232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24665941 - 24665821
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattacta-aaaaatttacaggtcctctcactacaggaccaaactacttaagcctattt 99  Q
    |||||||| || ||| |||||| || |||| ||||||| ||| |||||| |||||| |||||||| |||| ||||| | |||||| || |||||||||||    
T  24665941 ctgcctctggtgatccgactatgcttcatctgatctactctccttactacaaaaatctacaggtcttctctctacatgtccaaaccacctaagcctattt 24665842  T
Q  100 tctaacatcttttctactata 120  Q
    |||| ||| ||||||||||||    
T  24665841 tctaccatattttctactata 24665821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 30031235 - 30031131
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctca 253  Q
    |||||||||||||||| ||||||||||||||||  |||||||| |||| ||| || |||||||  || |||| |||||  |||||| |||||||||| ||    
T  30031235 catttctaatcctatcccgtctagtcttaccactcatccaacacaacaacctcatctccgctacactaacttgattctcatgttggctcttaaccgccca 30031136  T
Q  254 acact 258  Q
    |||||    
T  30031135 acact 30031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 5631798 - 5631693
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| ||||  |||||||||||||||  |||||||| |||||||| || | |||||  ||||||||| ||| | ||||| |||||||||| |    
T  5631798 tcattcctaatcatatccggtctagtcttaccactcatccaacacaacatcctcatcttcgctacacttactttactctcgcgttggctcttaaccgccc 5631699  T
Q  253 aacact 258  Q
    ||||||    
T  5631698 aacact 5631693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 9593873 - 9593990
Alignment:
Q  16 tgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttcta 115  Q
    ||||| ||||||||| ||||||| ||  |||||| |  || |||| ||| |||| ||||| | |||||| || ||||||||||||||| |||||||||||    
T  9593873 tgactctcctccatctgatctactcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 9593972  T
Q  116 ctataagtgctaccccaa 133  Q
    |||   ||||||||||||    
T  9593973 ctaatggtgctaccccaa 9593990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 5897604 - 5897479
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactac--------aggaccaaactacttaagcct 95  Q
    ||||||||||| ||||||||||||||||||||||| |||  ||||| ||||| ||||  || |||| ||||        | | |||||| ||||||||||    
T  5897604 cctcttgtaatttgactatcctccatccgatctactctccatactacaaaatatacatatcttctctctacatgcccaaacggccaaaccacttaagcct 5897505  T
Q  96 attttctaacatcttttctactataa 121  Q
    |||||| | |||||||||||||||||    
T  5897504 attttccaccatcttttctactataa 5897479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 12134203 - 12134294
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||| |||| || ||| ||||| ||||| |||||||| ||||| || || || |||||||||| |||||||| ||||| ||||||    
T  12134203 tcatttctaattctatatcatcttgtcttgccacacatccaacacaacattctcatctctgctatgcttagtttattctcgtgttagttctt 12134294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 33084038 - 33083963
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttat 228  Q
    ||||||||||| ||||| | ||||||||||||||| |||||||  | |||||| ||||| |||| |||||||||||    
T  33084038 tcatttctaattctatcccatctagtcttaccacacatccaacgcagcatcctcatttctgctacgcttactttat 33083963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 28085453 - 28085376
Alignment:
Q  54 atttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| |||| |||| ||||| | |||||| |  ||||||||||||||| || ||||||||||||| ||||||||||    
T  28085453 atttacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 28085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 32755981 - 32755921
Alignment:
Q  71 ctacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||| |||||||| |  ||||||||||||||| || ||||||||||||| ||||||||||    
T  32755981 ctacatgaccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 32755921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 4948628 - 4948715
Alignment:
Q  172 gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactt 259  Q
    |||||||||||||||| ||||||   ||||||||||| |||||||  |||| | |||||  |||||||||||| ||| | ||||||||    
T  4948628 gtctagtcttaccacacatccaaagcaacatcctaatctccgctacacttattctattcaggtgttggttctttaccacccaacactt 4948715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 4955599 - 4955686
Alignment:
Q  172 gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacactt 259  Q
    |||||||||||||||| ||||||   ||||||||||| |||||||  |||| | |||||  |||||||||||| ||| | ||||||||    
T  4955599 gtctagtcttaccacacatccaaagcaacatcctaatctccgctacacttattctattcaggtgttggttctttaccacccaacactt 4955686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 9594014 - 9594077
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgcta 216  Q
    ||||| ||||||||||| ||||||||||||||||  |||||||  |||||||| || |||||||    
T  9594014 tcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctccgcta 9594077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 33998306 - 33998381
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttat 228  Q
    ||||||||||||||||| | ||||||||||||||| |||||||  |||||| | || || |||| ||||| |||||    
T  33998306 tcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgctacgcttaatttat 33998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 608284 - 608158
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||| |||||||||| ||||||||  |||| || ||  |||| ||   || |||||||| |||| ||||| | |||||| |  |||||||||||||||    
T  608284 cctcttttaatctgactctcctccatttgatccactcttcttacaaaggcatctacaggtcttctctctacatgtccaaaccatctaagcctattttcta 608185  T
Q  104 acatcttttctactataagtgctaccc 130  Q
     || ||||||||||||| ||| |||||    
T  608184 tcaacttttctactataggtgataccc 608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 5258388 - 5258430
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  5258388 taagcctattttctaccaacttttctactataggtgctacccc 5258430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 12890626 - 12890584
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  12890626 taagcctattttctaccaacttttctactataggtgctacccc 12890584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 20427876 - 20427918
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  20427876 taagcctattttctaccaacttttctactataggtgctacccc 20427918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 30031298 - 30031256
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  30031298 taagcctattttctaccaacttttctactataggtgctacccc 30031256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 2079390 - 2079341
Alignment:
Q  81 aaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    |||| |||||||||||||||| | ||||||||||||||||  ||||||||    
T  2079390 aaaccacttaagcctattttccaccatcttttctactatagatgctaccc 2079341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 6056092 - 6056177
Alignment:
Q  173 tctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||||||  |||||||  |||||||  |||||  ||| |||||||| ||| | |||||||||||||||| | |||||||    
T  6056092 tctagtcttaccactcatccaacgcaacatccgcatttctactacgcttacttgattttcgtgttggttcttaaccacccaacact 6056177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 7150628 - 7150661
Alignment:
Q  161 aatcctatctcgtctagtcttaccacaaatccaa 194  Q
    ||||||||||||||||||||||||||| ||||||    
T  7150628 aatcctatctcgtctagtcttaccacacatccaa 7150661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 10100159 - 10100264
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||| ||| | |||||||||||||||  ||| |||  |||||||| || |||||||  ||||||| | ||| || |||| |||||||| | |    
T  10100159 tcatttctaatcatatattgtctagtcttaccactcatctaacgcaacatcctcatctccgctacacttacttgactctcgtcttggctcttaacctccc 10100258  T
Q  253 aacact 258  Q
    ||||||    
T  10100259 aacact 10100264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 14030884 - 14030807
Alignment:
Q  54 atttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||| ||| ||||  |||| | |||||| | ||||||||||| |||| || ||||||||||||| ||||||||||    
T  14030884 atttacatgtcttctctatacatgtccaaaccatttaagcctattatctaccaacttttctactataggtgctacccc 14030807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 43732543 - 43732451
Alignment:
Q  157 ttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccg 249  Q
    ||||||| ||||| | ||||||||||||||| ||||||| ||||||||| ||||| |||| || ||  |||||||||||||||||||| ||||    
T  43732543 ttctaattctatcacatctagtcttaccacacatccaacgtaacatcctcatttctgctacgcatatcttattcttgtgttggttcttcaccg 43732451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 36143346 - 36143239
Alignment:
Q  156 tttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaac 255  Q
    |||||||||||||||| |||||||||||||||   |||||| |||||||| || || |||| | | | |||||||| |||||||||||| ||||| ||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgctacgttgattttattctcgtgttggttcttcaccgcccaac 36143247  T
Q  256 actttgtt 263  Q
    ||| ||||    
T  36143246 actctgtt 36143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 13171951 - 13172073
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||   ||||| || || || | | |||||| |||||| || ||||||||||||||||| |    
T  13171951 tcatttctaatcctatcccgtctagtcttactacacatccaatgcaacattctcatctctgatgtgcttaatttatttttatgttggttcttaaccgccc 13172050  T
Q  253 aacactttgttttatacaacatc 275  Q
    |||||| |||   ||||||||||    
T  13172051 aacactctgtaccatacaacatc 13172073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 15215573 - 15215678
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||||||||  || ||||||||||||  ||||| || |||||||| || ||||||   ||||||||| ||| ||||||| |||||||||| |    
T  15215573 tcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctccgcttcacttactttactctcgtgttggctcttaaccgccc 15215672  T
Q  253 aacact 258  Q
    ||||||    
T  15215673 aacact 15215678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 25288876 - 25288777
Alignment:
Q  159 ctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||||| |||||||||||||| |||||| |  |||||||| || || ||||  |||| || ||||| ||||||| |||||||||| |||||||    
T  25288876 ctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgctacacttatttgattctcgtgttggctcttaaccgcccaacact 25288777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 25300211 - 25300112
Alignment:
Q  159 ctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||||| |||||||||||||| |||||| |  |||||||| || || ||||  |||| || ||||| ||||||| |||||||||| |||||||    
T  25300211 ctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgctacacttatttgattctcgtgttggctcttaaccgcccaacact 25300112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 32840480 - 32840399
Alignment:
Q  286 aatatatacttcatattttaaaataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaacttcgttcatt 367  Q
    |||||||| || | ||||||||| |||||||| |||| |||||||||||| ||| ||||| |||||||| ||||| ||||||    
T  32840480 aatatatatttgagattttaaaaaaattgaaaaaataccatgatatatgaccatataacaattcaatcacacttcattcatt 32840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 37077745 - 37077640
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||||||||||| |||||||  ||||| |  |||||||| || ||||| |  ||||||| ||||| ||||||| ||||||| || |    
T  37077745 tcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctccgccacacttacttgattctcgtgttggctcttaactgccc 37077646  T
Q  253 aacact 258  Q
    ||||||    
T  37077645 aacact 37077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 33828519 - 33828563
Alignment:
Q  219 cttactttattcttgtgttggttcttaaccgctcaacactttgtt 263  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  33828519 cttactttattctcgtgttggttcttaactgctcaacactttgtt 33828563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 13986474 - 13986383
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||| |||||  ||||||||||||| |||||||  |||||   ||||||||| || |||||||||||||| | ||||| ||||||||||||    
T  13986474 tcattcctaattatatctcgtctagtattaccactcatccagtgtaacatcctcatctccgctatgcttacctgattctcgtgttggttctt 13986383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 45512818 - 45512889
Alignment:
Q  173 tctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||||||||||||| |||||||  ||||| || || ||||||||||||| |||||| | ||||||||||||    
T  45512818 tctagtcttaccacacatccaacgaaacattctcatctccgctatgcttattttattttcgtgttggttctt 45512889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 29735771 - 29735681
Alignment:
Q  168 tctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    ||||||||||||||||||   |||||||| |||||||| || ||| ||| ||||| || ||||| ||||||||| |||| | |||||||||    
T  29735771 tctcgtctagtcttaccattcatccaacacaacatcctcatctccactacgcttatttcattctcgtgttggtttttaatcactcaacact 29735681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 2518693 - 2518734
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaa 194  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  2518693 tcatttctaatcctatctcatctagtcttaccacacatccaa 2518734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 29520641 - 29520588
Alignment:
Q  152 atcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    |||||||||||||||||| | ||||||||||||||| |||||||  ||||||||    
T  29520641 atcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcct 29520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 36069620 - 36069571
Alignment:
Q  156 tttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    ||||||||| |||| ||||||||||||||||| |||||||| ||||||||    
T  36069620 tttctaatcttatcccgtctagtcttaccacacatccaacacaacatcct 36069571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 36545127 - 36545022
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||| |||||||| || || ||||  ||||||| |||||  |||||  |||||||| | |    
T  36545127 tcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccaccc 36545028  T
Q  253 aacact 258  Q
    ||||||    
T  36545027 aacact 36545022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 44681341 - 44681382
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaa 194  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  44681341 tcatttctaatcttatctcgtctagtcttaccacacatccaa 44681382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 16252915 - 16252855
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccg 213  Q
    |||||||||||  |||||| |||| |||||||||| |||||||| |||||||| |||||||    
T  16252915 tcatttctaattttatctcatctaatcttaccacacatccaacacaacatcctcatttccg 16252855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 17491993 - 17492033
Alignment:
Q  218 gcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  17491993 gcttactttattctcgtgttggttcttaaccgcccaacact 17492033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 28300414 - 28300466
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 205  Q
    |||||||||||| |||||| ||||||||||| ||| |||||||| ||||||||    
T  28300414 tcatttctaatcttatctcatctagtcttactacacatccaacacaacatcct 28300466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29520777 - 29520697
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaac 84  Q
    |||||||| || ||||||||||||||| ||||||| ||| |||||| ||||| |||| ||| |||| ||||| | ||||||    
T  29520777 cctcttgtgatttgactatcctccatctgatctactctccttactacaaaatctacaagtcttctctctacatgcccaaac 29520697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 39946830 - 39946734
Alignment:
Q  160 taatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaaca 256  Q
    ||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| ||||| ||||||  |||||||||| |||||    
T  39946830 taatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcgtgttgactcttaaccgcccaaca 39946734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 39953559 - 39953671
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctta 245  Q
    |||||||| |||||||||  ||||  || || |||||||||| |||||||  ||||| || || || |||| ||| |||||||  | ||||||||||||     
T  39953559 aatgtcattatttctaattatatcatgtttaatcttaccacacatccaacgcaacattctcatctctgctacgctaactttatgttcgtgttggttcttt 39953658  T
Q  246 accgctcaacact 258  Q
    |||||||||||||    
T  39953659 accgctcaacact 39953671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 44373894 - 44373774
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||| ||  ||||||| ||| |||||| ||||| || ||||| |  | ||||| |  ||||| ||| |||||||||||| | ||||||||    
T  44373894 atctgactatcctctatttgatctactctctttactacaaaatctataggtctttactctacatgctcaaaccactcaagcctattttccaccatctttt 44373795  T
Q  113 ctactataagtgctaccccaa 133  Q
    ||||| || ||||||| ||||    
T  44373794 ctactttaggtgctactccaa 44373774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 45419311 - 45419235
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||||| | || ||||| | |||||| || |||| ||||||| || |||||||||||||||| ||||||||||||    
T  45419311 tacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctaccccaa 45419235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 16032977 - 16033032
Alignment:
Q  305 aaaataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaacttc 360  Q
    |||| |||||||| |||||||||||||||| |||| ||||| |||||||| |||||    
T  16032977 aaaaaaattgaaagaatatcatgatatatggtcatataacaattcaatcacacttc 16033032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 36395157 - 36395232
Alignment:
Q  57 tacaggtcctctcactacaggaccaaacta-cttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||||| |||| ||||| | |||||| | || |||||||||||||| || ||||||||||||| ||||||||||    
T  36395157 tacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctacccc 36395232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 40813283 - 40813224
Alignment:
Q  172 gtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattct 231  Q
    |||||||||||||||  |||||||| ||||||||||| || ||||  |||||||||||||    
T  40813283 gtctagtcttaccactcatccaacacaacatcctaatctctgctacacttactttattct 40813224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 6510728 - 6510778
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatc 203  Q
    |||||||||||| |||||| ||||||||||||||  |||||||| ||||||    
T  6510728 tcatttctaatcatatctcatctagtcttaccacttatccaacacaacatc 6510778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 18125215 - 18125173
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  18125215 taagcctattttctaccaacttttctactataggtgctacccc 18125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 30783342 - 30783463
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||||||||   ||||||||| ||||| |||||||  || ||||| || ||| |||  |||| | |||| | |||||||||||| | ||| |    
T  30783342 tcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctcatctccactacacttattctattatcgtgttggttcttca-cgccc 30783440  T
Q  253 aacactttgttttatacaacatc 275  Q
    |||||||||||  ||||||||||    
T  30783441 aacactttgttccatacaacatc 30783463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 32043570 - 32043528
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaac 195  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||    
T  32043570 tcatttctaattctatcccgtctagtcttaccacacatccaac 32043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36565481 - 36565523
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  36565481 taagcctattttctaccaacttttctactataggtgctacccc 36565523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 39946899 - 39946857
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  39946899 taagcctattttctaccaacttttctactataggtgctacccc 39946857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 33511340 - 33511271
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgctta 222  Q
    |||||||||||| |||||| | ||||||||||||| ||| | |  |||||||| ||||| ||||||||||    
T  33511340 tcatttctaatcatatctcatatagtcttaccacacatcaagcgcaacatcctcatttctgctatgctta 33511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 33841902 - 33841943
Alignment:
Q  302 tttaaaataattgaaataatatcatgatatatgatcatgtaa 343  Q
    ||||||| |||||||| ||||||||||||| |||||||||||    
T  33841902 tttaaaaaaattgaaagaatatcatgatatgtgatcatgtaa 33841943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 42854306 - 42854411
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||||   |||||||||||||||  ||||| |  |||||| | || |||||||  || |||||| ||| ||||||| |||||||||| |    
T  42854306 tcattcctaatcctattctgtctagtcttaccacttatccagcgcaacatcgtcatctccgctacactaactttactctcgtgttggctcttaaccgccc 42854405  T
Q  253 aacact 258  Q
    ||||||    
T  42854406 aacact 42854411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 4874413 - 4874485
Alignment:
Q  287 atatatacttcatattttaaaataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaactt 359  Q
    ||||||| || | |||| |||| | |||||||||||  ||||||||| ||||||||| |||||||||| ||||    
T  4874413 atatatatttgagatttcaaaagatttgaaataataatatgatatataatcatgtaatatttcaatcacactt 4874485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 9695705 - 9695629
Alignment:
Q  57 tacaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| | |||| ||||| | |||||| || |||||| | |||| | |||||||||||||||| ||||||||||||    
T  9695705 tacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctaccccaa 9695629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 10080207 - 10080239
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttacca 185  Q
    |||||||||||| ||||||||||||||||||||    
T  10080207 tcatttctaatcttatctcgtctagtcttacca 10080239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 12491378 - 12491418
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacc 129  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  12491378 taagcctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 21121137 - 21121105
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccac 186  Q
    |||||||||||||||| ||||||||||||||||    
T  21121137 catttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 30113427 - 30113479
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| | |||| ||||||||||| |||||||||||||||| ||| ||||||    
T  30113427 ccaaaccaattaaacctattttctaccatcttttctactatatgtgttacccc 30113479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 34482580 - 34482648
Alignment:
Q  300 attttaaaataattgaaataatatcatgatatatgatcatgtaacatttcaatcaaacttcgttcattt 368  Q
    ||||| ||| |||||||| |||| |||||||||||||||  || || |||||||| ||||| |||||||    
T  34482580 atttttaaaaaattgaaagaataccatgatatatgatcaaatagcaattcaatcacacttcattcattt 34482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 38178427 - 38178475
Alignment:
Q  16 tgactatcctccatccgatctacgctcattactaaaaaatttacaggtc 64  Q
    ||||||||||||||| ||||||| ||| |||||| ||||| ||||||||    
T  38178427 tgactatcctccatctgatctactctccttactacaaaatctacaggtc 38178475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 45512735 - 45512779
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||||    
T  45512735 taagcttattttccatcatcttttctactataggtgctaccccaa 45512779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 25747 - 25852
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||| ||||||||||| || ||||  ||||||| |||||  |||||  |||||||||| |    
T  25747 tcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccgccc 25846  T
Q  253 aacact 258  Q
    ||||||    
T  25847 aacact 25852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 25685 - 25727
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  25685 taagcctattttctaccaacttttctactataggtgctacccc 25727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 44023 - 44152
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    ||||| || ||||||||||||||||||   ||||| ||| |||||| | ||| |  ||||| |||| ||||| | |||||| || |||||||||||||      
T  44023 cctctagtgatctgactatcctccatctagtctactctccttactagagaatctgaaggtcttctctctacatgcccaaaccacctaagcctattttccg 44122  T
Q  104 acatcttttctactataagtgctaccccaa 133  Q
     |||||||||||||||| ||||||||||||    
T  44123 ccatcttttctactataggtgctaccccaa 44152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 31510 - 31468
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  31510 taagcctattttctaccaacttttctactataggtgctacccc 31468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 31448 - 31343
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| ||||  |||||||||||||||  |||||||  ||||||||||| || ||||  ||||||| |||||  |||||  |||||||| | |    
T  31448 tcattcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctaatctctgctacacttacttgattctcatgttgactcttaaccaccc 31349  T
Q  253 aacact 258  Q
    ||||||    
T  31348 aacact 31343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 16134475 - 16134572
Alignment:
Q  147 atgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctt 244  Q
    ||||| |||||||||||  |||||| ||||||||||||| | |||||||| |||||||| ||||  ||||| |||||| |||  ||||||||||||||    
T  16134475 atgtcgtcatttctaattttatctcatctagtcttaccatacatccaacacaacatcctcatttatgctatacttactatatgtttgtgttggttctt 16134572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 16347680 - 16347785
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||| ||||| ||| | |||||||||||||||  |||||||  |||||||| || |||||||  ||||||| | ||| ||||||| ||||||||||||    
T  16347680 tcatttttaatcatatattgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttacttaactctcgtgttggctcttaaccgctc 16347779  T
Q  253 aacact 258  Q
    ||||||    
T  16347780 aacact 16347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 250
Target Start/End: Complemental strand, 32516683 - 32516441
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    ||||||||||||||| |||||| |||||||||||| |||  ||||| | ||| |||| ||  | ||  |||| | | |||| || ||||||||||||| |    
T  32516683 cctcttgtaatctgattatccttcatccgatctactctccatactacagaatctacatgtattttctttacaagtctaaaccacctaagcctattttcca 32516584  T
Q  104 acatcttttctactataagtgctaccccaannnnnnnnnnnnaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatc 203  Q
     |||||||||||||||||||| ||| ||||            |||||  ||||||||||  |||||  |||||||||||||||| |||||||| ||||||    
T  32516583 ccatcttttctactataagtgttactccaactctctct----aatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacacaacatc 32516488  T
Q  204 ctaatttccgctatgcttactttattcttgtgttggttcttaaccgc 250  Q
     | || |||| || |  |||||||||||  || ||||||||||||||    
T  32516487 atcatctccgttacgtgtactttattctaatgatggttcttaaccgc 32516441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 43475358 - 43475243
Alignment:
Q  13 atctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttctaacatctttt 112  Q
    |||||||||||||||||| ||||||| ||| |||||| || || |||||||| |||| ||  |   |||||| || |||||||| |||| | ||||||||    
T  43475358 atctgactatcctccatctgatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatctttt 43475259  T
Q  113 ctactataagtgctac 128  Q
    |||||||| |||||||    
T  43475258 ctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 21093879 - 21093782
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttc 101  Q
    ||||| || |||||||||||||||||| ||||||| ||| |||||| ||||| | || ||| || | ||||| | ||||||||| |||||||||||||    
T  21093879 cctctagtgatctgactatcctccatctgatctactctctttactacaaaatctccaagtcttccctctacatgcccaaactacctaagcctattttc 21093782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 33667289 - 33667214
Alignment:
Q  58 acaggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    ||||||| |||| ||||| | |||||| || |||| ||| |||||| |||||||||||||||| ||||||||||||    
T  33667289 acaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaa 33667214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 6368227 - 6368349
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||  |||||||| |||   | |||||||| | |||  ||| ||||||| || |||| ||    
T  6368227 tcatttctaattctatctcgtctattcttaccacacatctaacgcaacatcctcattcaagttatgcttattctatgtttgcgttggttgtttaccgttc 6368326  T
Q  253 aacactttgttttatacaacatc 275  Q
    ||||| |||| | ||||||||||    
T  6368327 aacacgttgtctcatacaacatc 6368349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 1275245 - 1275140
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| ||||||||| |  |||||||||||||||  |||||||  |||||||| || || ||||||||||||| |||||  |||||  || ||||||| |    
T  1275245 tcattcctaatcctaccatgtctagtcttaccactcatccaacgcaacatcctcatctctgctatgcttacttgattctcatgttgactcgtaaccgccc 1275146  T
Q  253 aacact 258  Q
    ||||||    
T  1275145 aacact 1275140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 1287891 - 1287996
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||  |||||||||||||||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  1287891 tcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 1287990  T
Q  253 aacact 258  Q
    ||||||    
T  1287991 aacact 1287996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 2075776 - 2075881
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||||||||| |||||||||||| ||  |||||||  |||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  2075776 tcattcctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttgactcttaaccgccc 2075875  T
Q  253 aacact 258  Q
    ||||||    
T  2075876 aacact 2075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 5305594 - 5305493
Alignment:
Q  155 atttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaa 254  Q
    ||||||||| |||||| |||||||||||||||| |||||||  |||||||   | |  ||||| |||| |||||||| ||||| |||| ||||||| |||    
T  5305594 atttctaattctatcttgtctagtcttaccacacatccaacgcaacatccccgtctttgctattcttattttattctcgtgttcgttcataaccgcccaa 5305495  T
Q  255 ca 256  Q
    ||    
T  5305494 ca 5305493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 12492689 - 12492794
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||| |||||| ||||  |||||||||||||||  ||||||| ||||||||| || || ||||  ||||||| |||||  |||||  |||||||||| |    
T  12492689 tcattcctaatcttatcctgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttgactcttaaccgccc 12492788  T
Q  253 aacact 258  Q
    ||||||    
T  12492789 aacact 12492794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 21093756 - 21093663
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaa 246  Q
    ||||||||||| | ||| | ||||||||||||||| || ||||  |||||||| || ||| |||  |||| |||||||| ||||||||||||||    
T  21093756 tcatttctaattccatcacatctagtcttaccacacatacaacgcaacatcctcatatccactacacttattttattctcgtgttggttcttaa 21093663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 21952331 - 21952222
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||||||||| |||||||||||||||||||||| || ||||  |||||||| || |   |||  |||| ||||   | |||||||||||||| ||| |    
T  21952331 tcatttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatcttttctacacttaatttaagttcgtgttggttcttaagcgccc 21952232  T
Q  253 aacactttgt 262  Q
    ||||||||||    
T  21952231 aacactttgt 21952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 28186970 - 28187074
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    ||||||||||||||| |  |||||||||||||||| ||||||   ||||| || || || | | |||||| ||| ||||||||||||||||| ||||| |    
T  28186970 tcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctctgatgtgcttattttgttcttgtgttggttctt-accgccc 28187068  T
Q  253 aacact 258  Q
    ||||||    
T  28187069 aacact 28187074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 27829 - 27769
Alignment:
Q  198 aacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctcaacact 258  Q
    |||||||| || |||| ||||||||||| |||||  ||||||||||||||||| |||||||    
T  27829 aacatcctcatctccgttatgcttacttaattctcatgttggttcttaaccgcccaacact 27769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7359412 - 7359539
Alignment:
Q  1 ctgcctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctatttt 100  Q
    |||||||| || || ||||||||||||||| ||||||| ||| |||||| | ||| ||||  || |||| ||||| | |||||| || ||| ||||||||    
T  7359412 ctgcctctagtgatatgactatcctccatctgatctactctccttactacagaatctacatatcttctctctacatg-ccaaaccacctaaacctatttt 7359510  T
Q  101 ctaacatcttttctactataagtgctacc 129  Q
    | | ||| |||||||||||| ||| ||||    
T  7359511 ccaccatattttctactataggtgttacc 7359539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 15168832 - 15168792
Alignment:
Q  91 agcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  15168832 agcctattttctaccatcttttctactataggtgctacccc 15168792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 31636132 - 31636204
Alignment:
Q  61 ggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||| |||| ||||| | |||||| || |||| ||| |||||| |||||||||||||||| ||||||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaa 31636204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 34194799 - 34194851
Alignment:
Q  154 catttctaatcctatctcgtctagtcttaccacaaatccaacataacatccta 206  Q
    ||||||||||||||||  ||||||| |||||||| |||||||| |||||||||    
T  34194799 catttctaatcctatcctgtctagttttaccacacatccaacacaacatccta 34194851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 1275306 - 1275263
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccca 132  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  1275306 taagcctattttctaccaacttttctactataggtgctacccca 1275263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 6889058 - 6888991
Alignment:
Q  66 tctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||| ||||| | |||||| |||||||||||||||| | |||||||||  ||||| ||||||||||||    
T  6889058 tctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaa 6888991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 27944 - 27894
Alignment:
Q  80 caaactacttaagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||| || ||||||||||||| | |||||||||||||||| |||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctaccc 27894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 1287819 - 1287861
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  1287819 taagcctattttctaccaacttttctactataggtgctacccc 1287861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 1525624 - 1525515
Alignment:
Q  146 aatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttctta 245  Q
    |||||| |||||||||||  |||||||   |||||||||||| |||| || ||||||||| ||||| || | ||||| |||||  |  |||||||||||     
T  1525624 aatgtcgtcatttctaattttatctcg---agtcttaccacacatccgacgtaacatcctcatttcagcaaagcttattttatgttcatgttggttcttc 1525528  T
Q  246 accgctcaacact 258  Q
    ||||| |||||||    
T  1525527 accgcccaacact 1525515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 4496426 - 4496384
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  4496426 taagcctattttctaccagcttttctactataggtgctacccc 4496384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 6888973 - 6888931
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaac 195  Q
    |||||||||||| |||||| ||||||||||||||| |||||||    
T  6888973 tcatttctaatcatatctcatctagtcttaccacacatccaac 6888931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 14667815 - 14667761
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || |||| |||||||| | |||||||||||||||| ||||||||||||    
T  14667815 ccaaaccacctaagtctattttccaccatcttttctactataggtgctaccccaa 14667761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 16347618 - 16347660
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  16347618 taagcctattttctaccaacttttctactataggtgctacccc 16347660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 18351138 - 18351192
Alignment:
Q  79 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||||| || |||||||| |||||| ||| |||||||||||| ||||||||||||    
T  18351138 ccaaaccacctaagcctagtttctaccatattttctactataggtgctaccccaa 18351192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 24178552 - 24178510
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  24178552 taagcctattttctaccaacttttctactataggtgctacccc 24178510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 28977099 - 28977141
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  28977099 taagcctattttctaccaacttttctactataggtgctacccc 28977141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 31636220 - 31636319
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttggttcttaaccgctc 252  Q
    |||||| |||| |||||  |||||||||||||||||||||||    ||||| | || || |||| || || |||||| |||||||||||||| ||||| |    
T  31636220 tcatttataattctatccagtctagtcttaccacaaatccaa----acatcatcatctctgctacgcataatttatttttgtgttggttctttaccgccc 31636315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 38685009 - 38684967
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  38685009 taagcctattttctaccaacttttctactataggtgctacccc 38684967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 9235049 - 9235008
Alignment:
Q  153 tcatttctaatcctatctcgtctagtcttaccacaaatccaa 194  Q
    |||||| |||||||||| ||||||||||||||||| ||||||    
T  9235049 tcatttataatcctatcccgtctagtcttaccacacatccaa 9235008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 37124612 - 37124567
Alignment:
Q  86 acttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||||||||||||| | ||||||||| |||||| ||||||||||    
T  37124612 acttaagcctattttccatcatcttttcaactataggtgctacccc 37124567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 10082971 - 10083023
Alignment:
Q  81 aaactacttaagcctattttctaacatcttttctactataagtgctaccccaa 133  Q
    |||| ||||||| ||| |||||| |||||||||||||||| ||| ||||||||    
T  10082971 aaaccacttaagtctagtttctaccatcttttctactataggtgataccccaa 10083023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 26155848 - 26155793
Alignment:
Q  298 atattttaaaataattgaaataatatcatgatatatgatcatgtaacatttcaatca 354  Q
    ||||||||||| |||||||  |||||||||||| |||||||| ||||| ||||||||    
T  26155848 atattttaaaa-aattgaatgaatatcatgatacatgatcatataacaattcaatca 26155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 29938242 - 29938126
Alignment:
Q  4 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctcactacaggaccaaactacttaagcctattttcta 103  Q
    |||||||| ||||||||||||| ||||| ||||||  || |||| |   ||| |||||||| |||| ||| |||   |||| || ||||||||||||| |    
T  29938242 cctcttgtgatctgactatccttcatccaatctactgtccttaccaccgaatctacaggtcttctctctataggcttaaaccacctaagcctattttcca 29938143  T
Q  104 acatcttttctactata 120  Q
     ||||||||||| ||||    
T  29938142 ccatcttttctattata 29938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 34273099 - 34273027
Alignment:
Q  59 caggtcctctcactacaggaccaaactacttaagcctattttctaacatcttttctactataagtgctacccc 131  Q
    |||||| |||| ||||| | |||||| |  ||||||||||||||| || |||||||| |||| ||||||||||    
T  34273099 caggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctacccc 34273027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11836 - 11878
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctacccc 131  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  11836 taagcctattttctaccaacttttctactataggtgctacccc 11878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 1188 - 1229
Alignment:
Q  89 taagcctattttctaacatcttttctactataagtgctaccc 130  Q
    ||||||||||||||| || ||||||||||||| |||||||||    
T  1188 taagcctattttctaccaacttttctactataggtgctaccc 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 11 times since January 2019
Visitors: 4368