View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0689_high_18 (Length: 260)

Name: NF0689_high_18
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0689_high_18
NF0689_high_18
[»] chr8 (37 HSPs)
chr8 (2-250)||(26220161-26220421)
chr8 (2-176)||(26222538-26222724)
chr8 (53-214)||(24979789-24979949)
chr8 (53-234)||(22583854-22584034)
chr8 (53-219)||(3273560-3273728)
chr8 (53-212)||(17611507-17611665)
chr8 (53-206)||(34302222-34302376)
chr8 (54-212)||(24496276-24496436)
chr8 (53-212)||(23451144-23451305)
chr8 (80-234)||(23889505-23889657)
chr8 (54-219)||(22532345-22532510)
chr8 (54-219)||(22537030-22537195)
chr8 (58-234)||(39694476-39694652)
chr8 (53-239)||(32950576-32950762)
chr8 (53-154)||(17501847-17501948)
chr8 (3-61)||(273879-273937)
chr8 (3-61)||(641912-641970)
chr8 (54-170)||(24239320-24239437)
chr8 (2-60)||(30766291-30766349)
chr8 (55-190)||(39114776-39114911)
chr8 (55-211)||(44522398-44522554)
chr8 (54-154)||(4233564-4233664)
chr8 (53-154)||(13662762-13662863)
chr8 (53-154)||(13721422-13721523)
chr8 (53-154)||(22006758-22006859)
chr8 (53-154)||(24717361-24717462)
chr8 (53-128)||(30766211-30766286)
chr8 (53-170)||(271842-271960)
chr8 (3-61)||(827718-827776)
chr8 (53-170)||(829695-829813)
chr8 (53-119)||(20481104-20481170)
chr8 (56-118)||(23809498-23809560)
chr8 (53-91)||(24624477-24624515)
chr8 (53-99)||(39364446-39364492)
chr8 (21-61)||(13721527-13721567)
chr8 (53-154)||(16873545-16873646)
chr8 (21-61)||(16873650-16873690)
[»] chr4 (47 HSPs)
chr4 (2-250)||(14280859-14281119)
chr4 (2-250)||(54798087-54798347)
chr4 (4-212)||(15371663-15371871)
chr4 (53-234)||(6512297-6512477)
chr4 (54-214)||(18230415-18230574)
chr4 (53-168)||(4830420-4830535)
chr4 (53-168)||(4833715-4833830)
chr4 (53-168)||(2584407-2584522)
chr4 (53-220)||(22354352-22354518)
chr4 (53-168)||(13447204-13447319)
chr4 (4-200)||(20898978-20899185)
chr4 (53-168)||(27028420-27028535)
chr4 (53-191)||(14931364-14931501)
chr4 (2-154)||(4615328-4615492)
chr4 (54-212)||(15368205-15368362)
chr4 (53-207)||(15374005-15374158)
chr4 (54-212)||(16224054-16224211)
chr4 (2-61)||(8574317-8574376)
chr4 (53-169)||(54363742-54363858)
chr4 (54-165)||(19622549-19622661)
chr4 (2-115)||(15273005-15273118)
chr4 (134-214)||(9870664-9870744)
chr4 (54-130)||(15403217-15403293)
chr4 (53-154)||(5683023-5683124)
chr4 (53-237)||(15990941-15991124)
chr4 (54-170)||(17375739-17375856)
chr4 (53-168)||(16157469-16157583)
chr4 (6-61)||(52266279-52266334)
chr4 (134-220)||(3338125-3338211)
chr4 (4-61)||(22354291-22354348)
chr4 (53-198)||(18168629-18168774)
chr4 (5-61)||(30233267-30233323)
chr4 (53-99)||(15214140-15214186)
chr4 (53-170)||(13043227-13043344)
chr4 (2-59)||(14931507-14931564)
chr4 (17-61)||(4830539-4830583)
chr4 (17-61)||(4833834-4833878)
chr4 (54-234)||(10705408-10705587)
chr4 (54-234)||(10919178-10919357)
chr4 (2-61)||(26921848-26921907)
chr4 (54-152)||(45314368-45314466)
chr4 (53-148)||(18293362-18293457)
chr4 (4-61)||(15373944-15374001)
chr4 (53-154)||(7132559-7132660)
chr4 (21-61)||(7132664-7132704)
chr4 (21-61)||(20000340-20000380)
chr4 (53-154)||(20000384-20000485)
[»] chr3 (58 HSPs)
chr3 (2-250)||(36167140-36167400)
chr3 (2-250)||(10550913-10551173)
chr3 (2-250)||(21618991-21619251)
chr3 (54-234)||(12536326-12536506)
chr3 (4-231)||(37641696-37641935)
chr3 (4-211)||(29172072-29172289)
chr3 (4-227)||(22146963-22147197)
chr3 (53-211)||(34851520-34851677)
chr3 (53-234)||(9511115-9511296)
chr3 (53-234)||(9519090-9519271)
chr3 (54-207)||(17547693-17547844)
chr3 (4-212)||(13511677-13511899)
chr3 (53-212)||(24340163-24340321)
chr3 (4-212)||(52338171-52338390)
chr3 (53-208)||(11849818-11849970)
chr3 (54-209)||(13667306-13667460)
chr3 (53-200)||(15517327-15517473)
chr3 (53-219)||(45530816-45530984)
chr3 (4-212)||(12158894-12159117)
chr3 (53-209)||(20188400-20188554)
chr3 (53-214)||(37038721-37038882)
chr3 (8-191)||(14818700-14818895)
chr3 (53-130)||(23395314-23395391)
chr3 (71-212)||(52212648-52212789)
chr3 (54-214)||(42324190-42324350)
chr3 (53-184)||(178727-178858)
chr3 (54-170)||(50351082-50351198)
chr3 (53-154)||(54038776-54038877)
chr3 (2-162)||(8604447-8604619)
chr3 (2-61)||(11061759-11061818)
chr3 (2-61)||(17100090-17100149)
chr3 (160-219)||(19568421-19568480)
chr3 (57-154)||(40039391-40039488)
chr3 (53-237)||(13029354-13029537)
chr3 (53-154)||(16934479-16934580)
chr3 (2-61)||(13968179-13968238)
chr3 (2-61)||(13973654-13973713)
chr3 (2-60)||(11882802-11882860)
chr3 (53-239)||(18366704-18366888)
chr3 (53-237)||(13025762-13025945)
chr3 (4-61)||(24340325-24340382)
chr3 (53-109)||(15045669-15045725)
chr3 (53-154)||(18910654-18910755)
chr3 (2-61)||(13327123-13327182)
chr3 (53-128)||(13968100-13968175)
chr3 (53-128)||(13973575-13973650)
chr3 (18-61)||(38167365-38167408)
chr3 (2-61)||(51961719-51961778)
chr3 (2-61)||(53770478-53770537)
chr3 (55-121)||(17758759-17758824)
chr3 (55-121)||(19060079-19060144)
chr3 (53-119)||(38167412-38167478)
chr3 (53-119)||(53770541-53770607)
chr3 (54-99)||(3394085-3394130)
chr3 (53-90)||(17513502-17513539)
chr3 (115-183)||(12276533-12276601)
chr3 (21-61)||(18910610-18910650)
chr3 (55-154)||(30206900-30206999)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-248)||(72267-72525)
[»] chr5 (22 HSPs)
chr5 (2-250)||(18318385-18318645)
chr5 (2-228)||(20765457-20765694)
chr5 (2-234)||(8952235-8952478)
chr5 (54-201)||(21297586-21297733)
chr5 (53-200)||(21311130-21311277)
chr5 (53-227)||(40726364-40726537)
chr5 (53-221)||(22357111-22357277)
chr5 (53-168)||(23539440-23539555)
chr5 (53-234)||(22777264-22777444)
chr5 (56-234)||(10817487-10817665)
chr5 (141-219)||(21405842-21405920)
chr5 (3-168)||(22007149-22007325)
chr5 (3-162)||(21109334-21109505)
chr5 (4-61)||(40726303-40726360)
chr5 (3-59)||(21650138-21650194)
chr5 (53-104)||(20197664-20197715)
chr5 (54-184)||(21399049-21399179)
chr5 (54-99)||(21405938-21405983)
chr5 (2-61)||(21204365-21204424)
chr5 (2-61)||(22111582-22111641)
chr5 (53-154)||(1220016-1220117)
chr5 (53-154)||(9730878-9730979)
[»] chr6 (34 HSPs)
chr6 (2-250)||(16447955-16448215)
chr6 (102-250)||(19102663-19102811)
chr6 (4-234)||(18259372-18259612)
chr6 (54-201)||(31468007-31468154)
chr6 (2-236)||(13750471-13750715)
chr6 (54-234)||(29415751-29415932)
chr6 (53-234)||(5109909-5110089)
chr6 (53-206)||(24267519-24267671)
chr6 (4-227)||(8226935-8227169)
chr6 (53-212)||(24441333-24441491)
chr6 (53-234)||(28948246-28948427)
chr6 (4-227)||(23532091-23532325)
chr6 (53-209)||(5289298-5289448)
chr6 (54-201)||(19174844-19174990)
chr6 (53-215)||(20177668-20177830)
chr6 (53-215)||(22158161-22158323)
chr6 (54-191)||(29847516-29847652)
chr6 (53-214)||(25753111-25753272)
chr6 (53-214)||(25755281-25755442)
chr6 (69-154)||(7366105-7366190)
chr6 (53-169)||(16135966-16136082)
chr6 (2-61)||(24563053-24563112)
chr6 (54-191)||(18659110-18659247)
chr6 (2-51)||(25650672-25650721)
chr6 (17-61)||(5110093-5110137)
chr6 (53-154)||(16231553-16231654)
chr6 (18-61)||(5289452-5289495)
chr6 (53-191)||(16132663-16132801)
chr6 (53-128)||(24563116-24563191)
chr6 (55-154)||(18087316-18087415)
chr6 (53-99)||(25348029-25348075)
chr6 (21-61)||(16231509-16231549)
chr6 (21-61)||(18087421-18087461)
chr6 (21-61)||(23977386-23977426)
[»] chr7 (46 HSPs)
chr7 (2-250)||(48274092-48274352)
chr7 (53-231)||(19486165-19486342)
chr7 (55-220)||(13256368-13256532)
chr7 (126-250)||(10063084-10063208)
chr7 (2-219)||(11054321-11054551)
chr7 (53-209)||(17467607-17467761)
chr7 (53-209)||(17585453-17585607)
chr7 (53-168)||(3289021-3289136)
chr7 (54-151)||(37380555-37380653)
chr7 (6-99)||(10063211-10063316)
chr7 (55-239)||(40554707-40554890)
chr7 (53-214)||(13698857-13699018)
chr7 (53-154)||(28720372-28720473)
chr7 (54-191)||(8756387-8756523)
chr7 (25-154)||(18364585-18364709)
chr7 (53-168)||(21734121-21734238)
chr7 (53-234)||(33001837-33002014)
chr7 (53-119)||(3049088-3049154)
chr7 (53-168)||(21734680-21734798)
chr7 (5-61)||(3894477-3894533)
chr7 (54-114)||(13866448-13866508)
chr7 (2-61)||(4280734-4280793)
chr7 (53-152)||(32494702-32494801)
chr7 (54-154)||(16383419-16383519)
chr7 (4-61)||(19486346-19486403)
chr7 (5-60)||(112026-112081)
chr7 (53-128)||(4280797-4280872)
chr7 (18-61)||(17467765-17467808)
chr7 (2-61)||(21734802-21734861)
chr7 (2-61)||(25123895-25123954)
chr7 (53-116)||(37784671-37784734)
chr7 (2-61)||(37784738-37784797)
chr7 (2-61)||(42057048-42057107)
chr7 (53-119)||(2190864-2190930)
chr7 (152-234)||(8249443-8249524)
chr7 (53-99)||(48744205-48744251)
chr7 (54-152)||(15951287-15951385)
chr7 (21-61)||(370704-370744)
chr7 (53-154)||(370748-370849)
chr7 (21-61)||(13757987-13758027)
chr7 (53-154)||(13758031-13758132)
chr7 (53-154)||(14251392-14251493)
chr7 (21-61)||(14251497-14251537)
chr7 (2-58)||(15525327-15525383)
chr7 (5-61)||(26071014-26071070)
chr7 (5-61)||(26094801-26094857)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-250)||(117038-117299)
[»] scaffold0004 (3 HSPs)
scaffold0004 (53-234)||(75464-75645)
scaffold0004 (53-234)||(72614-72797)
scaffold0004 (53-234)||(60101-60281)
[»] scaffold0117 (2 HSPs)
scaffold0117 (4-230)||(40412-40650)
scaffold0117 (53-234)||(25807-25988)
[»] chr1 (19 HSPs)
chr1 (4-200)||(18824232-18824439)
chr1 (54-207)||(13527936-13528087)
chr1 (53-221)||(18270998-18271165)
chr1 (53-221)||(18275652-18275819)
chr1 (54-234)||(7320793-7320971)
chr1 (53-209)||(20058157-20058312)
chr1 (53-212)||(21473465-21473623)
chr1 (53-219)||(51476664-51476831)
chr1 (2-191)||(52983836-52984037)
chr1 (54-219)||(51324178-51324343)
chr1 (53-220)||(21239257-21239424)
chr1 (54-154)||(39061018-39061118)
chr1 (53-211)||(20030862-20031020)
chr1 (5-61)||(27330502-27330558)
chr1 (53-211)||(7791778-7791936)
chr1 (5-61)||(35054221-35054277)
chr1 (2-61)||(20825509-20825568)
chr1 (55-154)||(17148231-17148330)
chr1 (2-51)||(51476601-51476650)
[»] scaffold1276 (1 HSPs)
scaffold1276 (54-220)||(815-979)
[»] scaffold0720 (1 HSPs)
scaffold0720 (4-211)||(662-880)
[»] scaffold0174 (3 HSPs)
scaffold0174 (76-234)||(19402-19560)
scaffold0174 (123-234)||(11132-11243)
scaffold0174 (123-234)||(5012-5123)
[»] scaffold0273 (1 HSPs)
scaffold0273 (53-234)||(7352-7533)
[»] scaffold0037 (4 HSPs)
scaffold0037 (53-234)||(113166-113347)
scaffold0037 (54-221)||(118013-118180)
scaffold0037 (6-61)||(25450-25505)
scaffold0037 (2-51)||(118195-118244)
[»] scaffold0181 (1 HSPs)
scaffold0181 (2-191)||(25758-25959)
[»] scaffold2046 (1 HSPs)
scaffold2046 (2-236)||(801-1045)
[»] scaffold0331 (2 HSPs)
scaffold0331 (73-211)||(4397-4534)
scaffold0331 (4-60)||(4319-4375)
[»] chr2 (30 HSPs)
chr2 (53-234)||(22703649-22703830)
chr2 (53-201)||(24087799-24087946)
chr2 (53-207)||(6477458-6477610)
chr2 (25-168)||(24383299-24383442)
chr2 (54-220)||(43707253-43707419)
chr2 (71-231)||(19358577-19358740)
chr2 (53-154)||(34877501-34877602)
chr2 (53-169)||(45617869-45617985)
chr2 (53-104)||(16935096-16935147)
chr2 (53-104)||(17005756-17005807)
chr2 (53-191)||(21245357-21245495)
chr2 (55-107)||(20273282-20273334)
chr2 (53-154)||(22775667-22775768)
chr2 (53-154)||(22781045-22781146)
chr2 (53-168)||(28349840-28349955)
chr2 (2-61)||(19659485-19659544)
chr2 (53-191)||(24273272-24273410)
chr2 (2-61)||(27366930-27366989)
chr2 (5-61)||(36891434-36891490)
chr2 (18-61)||(9653643-9653686)
chr2 (2-61)||(19358496-19358555)
chr2 (53-237)||(26904080-26904261)
chr2 (53-128)||(27366851-27366926)
chr2 (53-119)||(21274736-21274802)
chr2 (20-61)||(42178560-42178601)
chr2 (21-61)||(3799202-3799242)
chr2 (53-154)||(12636362-12636463)
chr2 (53-154)||(12642136-12642237)
chr2 (21-61)||(12642241-12642281)
chr2 (53-154)||(34824106-34824207)
[»] scaffold0175 (1 HSPs)
scaffold0175 (7-211)||(18463-18678)
[»] scaffold0107 (2 HSPs)
scaffold0107 (53-212)||(3566-3724)
scaffold0107 (4-54)||(3505-3555)
[»] scaffold0377 (1 HSPs)
scaffold0377 (4-212)||(16319-16540)
[»] scaffold0429 (2 HSPs)
scaffold0429 (53-234)||(2194-2375)
scaffold0429 (2-61)||(2379-2438)
[»] scaffold0021 (2 HSPs)
scaffold0021 (53-168)||(147297-147412)
scaffold0021 (5-61)||(87737-87793)
[»] scaffold0149 (2 HSPs)
scaffold0149 (53-212)||(35760-35918)
scaffold0149 (4-61)||(35922-35979)
[»] scaffold0123 (2 HSPs)
scaffold0123 (53-214)||(6948-7109)
scaffold0123 (2-168)||(1530-1707)
[»] scaffold0017 (3 HSPs)
scaffold0017 (4-213)||(729-952)
scaffold0017 (4-108)||(7586-7702)
scaffold0017 (53-152)||(26414-26512)
[»] scaffold0962 (2 HSPs)
scaffold0962 (53-191)||(853-991)
scaffold0962 (16-61)||(995-1040)
[»] scaffold0453 (2 HSPs)
scaffold0453 (53-191)||(3789-3927)
scaffold0453 (2-51)||(3726-3775)
[»] scaffold0083 (2 HSPs)
scaffold0083 (53-234)||(10952-11133)
scaffold0083 (53-234)||(5234-5415)
[»] scaffold0371 (1 HSPs)
scaffold0371 (53-212)||(3550-3711)
[»] scaffold0256 (1 HSPs)
scaffold0256 (53-239)||(2037-2223)
[»] scaffold1957 (1 HSPs)
scaffold1957 (54-150)||(94-190)
[»] scaffold0521 (1 HSPs)
scaffold0521 (53-170)||(8428-8545)
[»] scaffold0825 (1 HSPs)
scaffold0825 (53-227)||(590-764)
[»] scaffold0113 (1 HSPs)
scaffold0113 (53-214)||(35163-35324)
[»] scaffold0247 (1 HSPs)
scaffold0247 (4-201)||(17479-17686)
[»] scaffold0309 (2 HSPs)
scaffold0309 (2-168)||(8749-8926)
scaffold0309 (2-61)||(6597-6656)
[»] scaffold0303 (1 HSPs)
scaffold0303 (53-119)||(687-753)
[»] scaffold0251 (3 HSPs)
scaffold0251 (21-119)||(22048-22146)
scaffold0251 (2-61)||(14145-14204)
scaffold0251 (53-119)||(14075-14141)
[»] scaffold0490 (1 HSPs)
scaffold0490 (53-168)||(5557-5671)
[»] scaffold0269 (1 HSPs)
scaffold0269 (54-190)||(16118-16254)
[»] scaffold0047 (1 HSPs)
scaffold0047 (2-61)||(76798-76857)
[»] scaffold0025 (1 HSPs)
scaffold0025 (53-119)||(146100-146166)
[»] scaffold0188 (1 HSPs)
scaffold0188 (2-43)||(1-42)
[»] scaffold0106 (1 HSPs)
scaffold0106 (54-209)||(21657-21812)
[»] scaffold0042 (1 HSPs)
scaffold0042 (53-168)||(51881-51996)
[»] scaffold0447 (6 HSPs)
scaffold0447 (53-119)||(4068-4134)
scaffold0447 (53-191)||(7526-7663)
scaffold0447 (53-119)||(8682-8748)
scaffold0447 (53-191)||(12140-12277)
scaffold0447 (18-61)||(4021-4064)
scaffold0447 (18-61)||(8635-8678)
[»] scaffold0383 (3 HSPs)
scaffold0383 (53-119)||(6676-6742)
scaffold0383 (53-191)||(10135-10272)
scaffold0383 (18-61)||(6629-6672)
[»] scaffold0039 (1 HSPs)
scaffold0039 (53-152)||(19557-19656)
[»] scaffold0456 (2 HSPs)
scaffold0456 (55-154)||(2026-2125)
scaffold0456 (55-154)||(9171-9270)
[»] scaffold0597 (1 HSPs)
scaffold0597 (18-61)||(1736-1779)
[»] scaffold0261 (1 HSPs)
scaffold0261 (2-61)||(6760-6819)
[»] scaffold0342 (1 HSPs)
scaffold0342 (18-60)||(5395-5437)
[»] scaffold0125 (1 HSPs)
scaffold0125 (53-99)||(28222-28268)
[»] scaffold0034 (3 HSPs)
scaffold0034 (53-152)||(79361-79460)
scaffold0034 (54-152)||(40184-40282)
scaffold0034 (54-152)||(45667-45765)
[»] scaffold0103 (1 HSPs)
scaffold0103 (56-154)||(33168-33266)
[»] scaffold0077 (1 HSPs)
scaffold0077 (18-59)||(14777-14818)
[»] scaffold0016 (1 HSPs)
scaffold0016 (53-121)||(166773-166841)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 26220161 - 26220421
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  26220161 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgtttttgcctacgcgctcctgacacttagctctat 26220260  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  26220261 cataatctacagaaaaatttcagtttcaaccacccaaaaattggtttccaaaacctcacataatcactcatttgcaaaaacatttagacaccgactcttc 26220360  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26220361 aagcgaaaatcccaattttcatcaatccaaactcaaaaactgattaggaatttaacctatg 26220421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 26222724 - 26222538
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||||||    
T  26222724 catcagattttcacccttcatgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 26222625  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttag 176  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26222624 cacaatctacagaaaaatttcagtttcaaccacccaaaaattggtttccaaaacctcacataatcactcatttgcaaaaacatttag 26222538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 24979789 - 24979949
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  24979789 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttcccaaacctcacataa 24979888  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    || || |||||| ||||| |||||||||| |  |||||| ||||||||| ||||| ||||||    
T  24979889 tctcttatttgc-aaaacgtttagacaccaatttttcaaacgaaaatcccaatttccatcaa 24979949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 22584034 - 22583854
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||| |||||  | |||||||||||||| |||||| |||||||  |||||||| |||||||||||||||||||| | |||||||| ||||||||||    
T  22584034 ccgttttcacctacatgttcctgacacttagccctatcataatctacaaaaaaattcaagtttcaaccacccaaaaatcgatttccaaa-cctcacataa 22583936  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||||||||| ||||||||||||| |||||| ||||||||| ||||| |||||| |||||| | ||||||||||    
T  22583935 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaatttccatcaacccaaaccccaaaactgatt 22583854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 219
Target Start/End: Original strand, 3273560 - 3273728
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc---aaaaattggtttccaaaacctcaca 149  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||| || |||||| ||||||||||||||   |||||| | ||||| ||||||||||    
T  3273560 ccgttttcgcctacacgctcctgacacttagctctatcatattctacagataaattcaagtttcaaccacccaaaaaaaatcgatttcc-aaacctcaca 3273658  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    || || || |||||||||||| |||||||||| || |||||| ||||||||| |||||||||||| ||||    
T  3273659 tactcccttatttgcaaaaacgtttagacaccaacttttcaagcgaaaatcccaattttcatcaacccaa 3273728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 212
Target Start/End: Complemental strand, 17611665 - 17611507
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  17611665 ccgttttcgcctacacgctcctgacacttaactctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 17611566  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| |||||||||||||  ||||| ||||||||| ||||| ||||    
T  17611565 tctcttatttgc-aaaacgtttagacaccgactattcaaacgaaaatcccaatttccatc 17611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 206
Target Start/End: Original strand, 34302222 - 34302376
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc---aaaaattggtttccaaaacctcaca 149  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||   |||||| | ||||| ||||||||||    
T  34302222 ccgttttcgcctacacgctcctaacacttagctctatcataatctacggaaaaattcaagtttcaaccacccaaaaaaaatcgatttcc-aaacctcaca 34302320  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaatt 206  Q
    ||||| || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||    
T  34302321 taatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatt 34302376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 24496276 - 24496436
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaa---ttggtttccaaaacctcacat 150  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||   | | ||||  |||||||||||    
T  24496276 cgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacctaaaaaaaatcgatttcacaaacctcacat 24496375  T
Q  151 aatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    |||| || |||||||||| | ||||||||||||| |||||| ||||||||| ||||| ||||    
T  24496376 aatctcttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatc 24496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 23451144 - 23451305
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaa---ttggtttccaaaacctcaca 149  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||   | | ||| | ||||||||||    
T  23451144 ccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaaaaatcgattttccaaacctcaca 23451243  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    ||||| || |||||||||| | ||||||||||||| |||||| | ||||||| ||||| ||||    
T  23451244 taatctcttatttgcaaaa-cgtttagacaccgacttttcaaactaaaatcccaatttccatc 23451305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 23889505 - 23889657
Alignment:
Q  80 ttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagaca 179  Q
    ||||| |||||| ||||||| ||||||||| |||||||||||||||||| | | |||||||| |||||||||||| || |||||||||||| ||||||||    
T  23889505 ttagccctatcataatctacagaaaaattcaagtttcaaccacccaaaa-tcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagaca 23889602  T
Q  180 ccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||||  |||||| ||||||||  ||||| |||||| |||||| | ||||||||||    
T  23889603 ccgatttttcaagcgaaaatctcaatttccatcaacccaaaccccaaaactgatt 23889657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 22532510 - 22532345
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||  | ||  ||| ||| ||||||| ||||| |||   ||| | |||||||||||||    
T  22532510 cgttttcgcctacacgctcctgacacttggctctatcataatctatagcaat-ttcaagtctcaaccatcccaagaatcattttgccaaacctcacataa 22532412  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    || || |||||||||||| |||||||||||||  ||| | ||||||||| |||||||||||| ||||    
T  22532411 tcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22532345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 22537195 - 22537030
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||  | ||  ||| ||| ||||||| ||||| |||   ||| | |||||||||||||    
T  22537195 cgttttcgcctacacgctcctgacacttggctctatcataatctatagcaat-ttcaagtctcaaccatcccaagaatcattttgccaaacctcacataa 22537097  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    || || |||||||||||| |||||||||||||  ||| | ||||||||| |||||||||||| ||||    
T  22537096 tcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22537030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 234
Target Start/End: Complemental strand, 39694652 - 39694476
Alignment:
Q  58 ttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataatcgc 156  Q
    ||||||||| | |||||||||||| | ||||||| |||||||||  |  ||| ||| ||||||| ||||| |||   ||||| ||||||||||||||| |    
T  39694652 ttcgcctacactctcctgacacttggttctatcataatctacggctat-ttcaagtctcaaccatcccaagaatcattttcccaaacctcacataatccc 39694554  T
Q  157 tcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    | |||||||||||  ||||||||||||| |||||| ||||||||  || ||||||||| |||||| | |||| |||||    
T  39694553 ttatttgcaaaaatgtttagacaccgacttttcaagcgaaaatctcaactttcatcaacccaaaccccaaaattgatt 39694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 32950576 - 32950762
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||| | | |||||||||| |||||| | ||||| ||||||||||||    
T  32950576 ccgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttcaattctcaaccaccccaaaaatcgatttcccaaacctcacata 32950674  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaa 239  Q
    ||| ||  ||||||||||| ||||||| ||||| |||||| |  |||| | || || |||||| |||||| | |||||||||| ||||    
T  32950675 atctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcaacccaaaccccaaaactgattgggaa 32950762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 17501847 - 17501948
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| ||| |||||||||| ||||||||| ||||||| | ||| ||| ||||||||||| ||||| |||   ||||||||||||||||||    
T  17501847 ccgttttcgcctacacgcccctgacacttggctctatcataatctacag-aaatttcaagtttcaaccatcccaagaatcattttccaaaacctcacata 17501945  T
Q  152 atc 154  Q
    |||    
T  17501946 atc 17501948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 273879 - 273937
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  273879 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 273937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 641970 - 641912
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  641970 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 24239320 - 24239437
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||||| ||| || || | |||||||||  || ||||  |||||||| ||||||| ||| |||||||||   |||||||||||||||||||    
T  24239320 cgttttcgcctacgcactcatgtcattcagctctatcgtaacctacataaaaattcaagtttcagccatcccaaaaatcattttccaaaacctcacataa 24239419  T
Q  153 tcgctcatttgcaaaaac 170  Q
    || || ||| ||||||||    
T  24239420 tcacttattggcaaaaac 24239437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 30766349 - 30766291
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttc 60  Q
    ||||||||||||  ||||||||||||||||| |||||  | ||||||||||||||||||    
T  30766349 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttc 30766291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 190
Target Start/End: Original strand, 39114776 - 39114911
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||| ||||||||||||||  ||||| || |||||||  |||||||||| ||||||| || |||||||||   ||||||||||||| |||||    
T  39114776 gttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaattccatgtttcaatcatcccaaaaatcattttccaaaacctcgcataa 39114873  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttca 190  Q
     | || ||| || |||||| ||| ||| |||| |||||    
T  39114874 acacttattggcgaaaacacttaaacatcgacatttca 39114911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 211
Target Start/End: Complemental strand, 44522554 - 44522398
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttcca-aaacctcacataa 152  Q
    |||||||||| | |||||||||||||| ||||||||  ||||||| | ||  ||| ||| ||||||| ||||| |||   |||||  ||||||||||||     
T  44522554 gttttcgcctccacgctcctgacacttggctctatcttaatctacagcaat-ttcaagtctcaaccatcccaagaatcattttccccaaacctcacatag 44522456  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcat 211  Q
    || || |||||||||| | ||||||||||||| ||||||  |||||||| |||||||||    
T  44522455 tctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcat 44522398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 4233564 - 4233664
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| |||||||||||||||  ||||||| |||||||   ||| ||| ||| ||||||| ||||| |||   |||||||||||||||||||    
T  4233564 cgttttcgcctacacgctcctgacacttaaatctatcataatctac-ataaatttcaagtctcaaccatcccaagaatcattttccaaaacctcacataa 4233662  T
Q  153 tc 154  Q
    ||    
T  4233663 tc 4233664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 13662863 - 13662762
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||| ||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  13662863 ccgttttcgcctacacgctcctgagacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaattcattttccaaaacctcacat 13662766  T
Q  151 aatc 154  Q
    ||||    
T  13662765 aatc 13662762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 13721523 - 13721422
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  13721523 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 13721426  T
Q  151 aatc 154  Q
    ||||    
T  13721425 aatc 13721422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 22006859 - 22006758
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||| ||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  22006859 ccgttttcgcctacacgctcttgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 22006762  T
Q  151 aatc 154  Q
    ||||    
T  22006761 aatc 22006758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 24717462 - 24717361
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||||  ||||||| || |||||||||| ||||||| |    ||| ||||||||||||    
T  24717462 ccgttttcgcctacacgctcctgacacttaactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcatcttcgaaaacctcacat 24717365  T
Q  151 aatc 154  Q
    ||||    
T  24717364 aatc 24717361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 30766286 - 30766211
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  30766286 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 30766211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 271960 - 271842
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||| ||||| || |||||||||||  ||||| || ||||||   |||| |||  |||||||||| ||||||| |   ||||||||||||||||||    
T  271960 ccgttttcacctacacgatcctgacacttgactctaacataatctataaaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacata 271861  T
Q  152 atcgctcatttgcaaaaac 170  Q
    ||| |||||| || |||||    
T  271860 atcactcattggcgaaaac 271842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 827776 - 827718
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||   ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  827776 atcagattttggacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 827718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 829695 - 829813
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||| ||||| || |||||||||||  ||||| || ||||||   |||| |||  |||||||||| ||||||| |   ||||||||||||||||||    
T  829695 ccgttttcacctacacgatcctgacacttgactctaacataatctataaaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacata 829794  T
Q  152 atcgctcatttgcaaaaac 170  Q
    ||| |||||| || |||||    
T  829795 atcactcattggcgaaaac 829813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 20481104 - 20481170
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    ||||||||||||||  |||||||||||||| | |||||  ||| ||| ||||||||| |||||||||    
T  20481104 ccgttttcgcctacatgctcctgacacttaaccctatcttaatgtacagaaaaattcaagtttcaac 20481170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 23809498 - 23809560
Alignment:
Q  56 ttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaa 118  Q
    |||||| |||||||||||||| ||||| |||||||||| | |||  |||||||||| ||||||    
T  23809498 ttttcgtctacgcgctcctgaaacttaactctatcacattgtacataaaaattccattttcaa 23809560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 24624477 - 24624515
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  24624477 ccgttttcgcctacgtgctccttacacttagctctatca 24624515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 39364446 - 39364492
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||    
T  39364446 ccgttttcgcctacacgctcctgacacttggctctatcttaatctac 39364492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 13721567 - 13721527
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  13721567 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 13721527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 16873646 - 16873545
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| ||| |||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  16873646 ccgttttcgcctacatgctcctaacacttggcactatcataatttac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 16873549  T
Q  151 aatc 154  Q
    ||||    
T  16873548 aatc 16873545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 16873690 - 16873650
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  16873690 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 16873650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 14280859 - 14281119
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgt------------tttcgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||            ||||||||||||||||||||||| |||||||||    
T  14280859 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctat 14280958  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  14280959 cacaatctacagaaaaatttcagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacaccgactcttc 14281058  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14281059 aagcgaaaatcccaattttcatcaatccaaactcaaaaactgattaggaatttaacctatg 14281119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 54798347 - 54798087
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||            |||||||||||||||||| |||||||||    
T  54798347 catcagatttccacccttcacgttttcgcgcctaaaaaacaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctat 54798248  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||  |||    
T  54798247 cacaatctacagaaaaattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcagtcatatgcaaaaacatttagacaccgactcttc 54798148  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  54798147 aagcgaaaatcccaattttcatcaattcaaactcaaaaactgattaggaatttaacctatg 54798087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 15371663 - 15371871
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaa 103  Q
    ||||||||||| ||||||||||||||  | ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||  ||    
T  15371663 tcagattttcaaccttcacgttttcggacataaaaatcaaaccgttaacccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaa 15371762  T
Q  104 aaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcca 202  Q
    | |||| ||||||||| |||| |||||| | ||||| ||||||||||||||| || |||||| ||||| |||||||||||||  ||||| |||||||||     
T  15371763 agattcaagtttcaactacccaaaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgactattcaaacgaaaatccc 15371861  T
Q  203 aattttcatc 212  Q
    ||||| ||||    
T  15371862 aatttccatc 15371871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 6512297 - 6512477
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||   |||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  6512297 ccgttttcgcctatatgctcctgaaacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 6512396  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||| ||||| ||||||||||||  |||||| ||||||||| |||||||||||| |||||| | || |||||||    
T  6512397 tctcttatttgc-aaaacgtttagacaccgatttttcaaacgaaaatcccaattttcatcaacccaaaccccaatactgatt 6512477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 18230415 - 18230574
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||   |||||| |||||||||||||    
T  18230415 cgttttcgcctaaacgctcctgacacttagctctatcgtaatctacagaaaaattcaagtttcaaccacccaaaaatcaatttccagaacctcacataat 18230514  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    | || |||||| ||||| ||||||||||||  |||||| ||||||||| ||||||||||||    
T  18230515 cacttatttgc-aaaacgtttagacaccgagttttcaagcgaaaatcccaattttcatcaa 18230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 4830535 - 4830420
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  4830535 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttccagaacctcacataa 4830436  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  4830435 tcacttatttgcaaaa 4830420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 4833830 - 4833715
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  4833830 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttccagaacctcacataa 4833731  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  4833730 tcacttatttgcaaaa 4833715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 2584522 - 2584407
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||    
T  2584522 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataa 2584423  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  2584422 tcacttatttgcaaaa 2584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 220
Target Start/End: Original strand, 22354352 - 22354518
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  ||||||||||||||||| |||||| ||||||  ||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  22354352 ccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataa 22354451  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
    || || |||||| ||||| ||||||||||||   ||||| ||||||| | | |||||||||| |||||    
T  22354452 tcacttatttgc-aaaacgtttagacaccgaatcttcaagcgaaaattccagttttcatcaacccaaa 22354518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 13447204 - 13447319
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||| | |||| ||||||||||||||    
T  13447204 ccgttttcgcctacacgctcctgacacttatctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttctaaaacctcacataa 13447303  T
Q  153 tcgctcatttgcaaaa 168  Q
    ||||| ||||| ||||    
T  13447304 tcgcttatttgtaaaa 13447319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 20899185 - 20898978
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||            ||||  ||||| ||| ||||||||||||||    
T  20899185 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcatgaaacttagctctatca 20899086  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  ||||||||| || ||||||||||||||||| | | |||||||||||||| |||| || |||||| ||||| ||||||||||||| ||||||    
T  20899085 taatctatagaaaaattcaagcttcaaccacccaaaaatcgatctccaaaacctcacacaatcacttatttgc-aaaacgtttagacaccgacttttcaa 20898987  T
Q  192 tcgaaaatc 200  Q
     ||||||||    
T  20898986 acgaaaatc 20898978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 27028420 - 27028535
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||| ||| ||||||| |    
T  27028420 ccgttttcgcctaaacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttcccaaaactcacatga 27028519  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  27028520 tcccttatttgcaaaa 27028535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 14931501 - 14931364
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||||||||| | ||| | |||||||||||||    
T  14931501 ccgttttcgcctacccgctcctgacacttggctctatcataatctatagaaaaattcaagtttcaaccacccaaaaatcgattttccaaacctcacataa 14931402  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || || |||||| ||||| ||||||| ||||| ||||||    
T  14931401 tctcttatttgc-aaaacgtttagactccgacttttcaa 14931364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 4615492 - 4615328
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaac------------ccgttttcgcctacgcgctcctgacacttagctctat 89  Q
    |||||||||| || ||||||||||||||||| |||||  ||||||||||||            |||||||||||||| ||| ||||||||||||||||||    
T  4615492 catcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaactcgtcttcgatgccgttttcgcctacacgcacctgacacttagctctat 4615393  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatc 154  Q
    || ||||||| ||||||||  ||||||||||||| |||||||| ||||| |||||||||||||||    
T  4615392 cataatctacagaaaaattgaagtttcaaccacctaaaaattgatttcccaaacctcacataatc 4615328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 15368205 - 15368362
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||||| |  || | ||||||||||||||    
T  15368205 cgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgacttgccaaacctcacataat 15368304  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
      || |||||| ||||| ||||||| |||||  ||||||||||||||| ||||| ||||    
T  15368305 ttcttatttgc-aaaacgtttagacgccgactattcaatcgaaaatcccaatttccatc 15368362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 207
Target Start/End: Original strand, 15374005 - 15374158
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||| ||||| || ||||||||||||||  ||||| ||||||   ||| |||| |||||||||||||||||||||| ||||| |||||||||||||    
T  15374005 ccgttttcacctacacgttcctgacacttagccttatcataatctataaaaagattcaagtttcaaccacccaaaaattgatttcccaaacctcacataa 15374104  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattt 207  Q
    || || |||||| ||||| |||||||||||||  ||||| ||||||||| |||||    
T  15374105 tctcttatttgc-aaaacgtttagacaccgactattcaaacgaaaatcccaattt 15374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 16224054 - 16224211
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    |||||||| |||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||| | | ||||| ||||||||||||||    
T  16224054 cgttttcgtctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaactcgatttcccaaacctcacataat 16224153  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    | || |||| | ||||| |||||||||||||  ||||| ||||||||| ||||| ||||    
T  16224154 ctcttattt-ccaaaacgtttagacaccgactattcaaacgaaaatcccaatttccatc 16224211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 8574376 - 8574317
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8574376 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcg 8574317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 54363858 - 54363742
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||  | ||| ||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  54363858 ccgttttcgcctacacgctcgtgacacttagctctatcataatctatag-aaatttcaagtttcaaccatcccaaaaattattttccaaaacctcacata 54363760  T
Q  152 atcgctcatttgcaaaaa 169  Q
    ||| || ||| |||||||    
T  54363759 atcacttattggcaaaaa 54363742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 19622661 - 19622549
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| ||||| | ||||||| |||||||| ||||||  ||||||||  ||||||||||| |||||||||   |||||||||||||||||||    
T  19622661 cgttttcgcctacacgctcttaacacttaactctatcataatctatagaaaaattgaagtttcaaccatcccaaaaatcattttccaaaacctcacataa 19622562  T
Q  153 tcgctcatttgca 165  Q
    || || |||||||    
T  19622561 tcacttatttgca 19622549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 15273118 - 15273005
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcgcctacgcgctcctgacacttagctctatcacaatctacgg 101  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| ||||||||||||||  |||||| ||||||||| | |||| |||  || |    
T  15273118 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgcctacatgctcctaacacttagcacgatcataatgcacag 15273019  T
Q  102 aaaaattccagttt 115  Q
    |||||| |||||||    
T  15273018 aaaaatcccagttt 15273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 9870744 - 9870664
Alignment:
Q  134 tttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||||| ||||||||||||||| || | |||||||||| ||||||||||||| |||||| ||||||||  ||||||||||||    
T  9870744 tttcccaaacctcacataatcccttacttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatcaa 9870664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 15403217 - 15403293
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaat 130  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||  ||| |||| ||||||| ||||||||||||    
T  15403217 cgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcacccacccaaaaat 15403293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 5683124 - 5683023
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaa-ccacccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| | ||| |||  ||||||| |  |||||||||   ||||||||||||||||||    
T  5683124 ccgttttcgcctacacgctcctgacacttagctctatcataatctacag-aaatttcatgtttcaatcttcccaaaaatcattttccaaaacctcacata 5683026  T
Q  152 atc 154  Q
    |||    
T  5683025 atc 5683023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 237
Target Start/End: Original strand, 15990941 - 15991124
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||| |||| | |||||||||||| ||||||||| ||||||| |  |  ||| ||| ||||||| |||||||||   ||||| ||||||||||||    
T  15990941 ccgttttcggctacactctcctgacacttggctctatcataatctacagctat-ttcaagtctcaaccatcccaaaaatcattttcccaaacctcacata 15991039  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattagg 237  Q
    ||| || |||||| ||||| |||| ||  |||| |||||| |||||   | |||||||||| |||||||| | |||||||||||||    
T  15991040 atctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaacctccaattttcatcgatccaaaccccaaaactgattagg 15991124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 17375856 - 17375739
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    |||||| ||||||  |||||||  | |||||||||||| || |||| ||||||||| ||||||||||| | |||||||   |||||||||||||||||||    
T  17375856 cgtttttgcctacatgctcctggaatttagctctatcataacctacagaaaaattcaagtttcaaccatctcaaaaatcattttccaaaacctcacataa 17375757  T
Q  153 tcgctcatttgcaaaaac 170  Q
    || || ||| ||||||||    
T  17375756 tcacttattggcaaaaac 17375739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 16157469 - 16157583
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||| ||| || |||| |||||| ||||||| |||||| || ||||||||| | |||||||| | ||||| ||| ||||||| |    
T  16157469 ccgttttcgcctacacgctcatgagacatagcactatcataatctaccgaaaaactcaagtttcaacta-ccaaaaatcgatttcccaaaactcacatca 16157567  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  16157568 tctcttatttgcaaaa 16157583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 52266334 - 52266279
Alignment:
Q  6 agattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||||    
T  52266334 agattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 52266279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 3338125 - 3338211
Alignment:
Q  134 tttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
    ||||| |||||||||||| || || |||||||| ||  ||||||||||||| |||||| ||||||||| ||||||||| || |||||    
T  3338125 tttcccaaacctcacatagtcccttatttgcaagaatgtttagacaccgacttttcaagcgaaaatcccaattttcatgaacccaaa 3338211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22354291 - 22354348
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||||||    
T  22354291 tcagattttcaaccttcacgttttcgctcttaaaaaccaaaccgttaacccgttttcg 22354348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 18168629 - 18168774
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||| ||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  18168629 ccgttttcgcctacacgctcttgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 18168726  T
Q  151 aatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaa 198  Q
    |||| || ||| || |||||  ||| ||| |||| ||||| |||||||    
T  18168727 aatcacttattggcgaaaacgcttaaacatcgacatttcactcgaaaa 18168774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30233323 - 30233267
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||  |||||||||||||||| ||||| |||||||||||| |||||||||    
T  30233323 cagattttcaatcttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 30233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 15214186 - 15214140
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||    
T  15214186 ccgttttcgcctacacgctcctgacacttggctctatcataatctac 15214140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 13043344 - 13043227
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||| |||||||||||| | ||||||| |||||||| ||||||| || || ||| ||||||| | | || |||||   |||||| ||| ||||||||    
T  13043344 ccgtttttgcctacgcgctcttaacacttaactctatcataatctacagagaatttcaagtttcagctatcctaaaataattttccagaacttcacataa 13043245  T
Q  153 tcgctcatttgcaaaaac 170  Q
    || || |||| |||||||    
T  13043244 tcactgattttcaaaaac 13043227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 14931564 - 14931507
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtttt 59  Q
    |||||||||| || ||||||||||||| ||| |||||  |||||||||||||||||||    
T  14931564 catcagatttccaaccttcacgttttcacgcgtaaaaaccaaaccgttaacccgtttt 14931507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4830583 - 4830539
Alignment:
Q  17 cttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  4830583 cttcacgttttcgcgcataaaatccaaaccgttaacccgttttcg 4830539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 4833878 - 4833834
Alignment:
Q  17 cttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  4833878 cttcacgttttcgcgcataaaatccaaaccgttaacccgttttcg 4833834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 10705408 - 10705587
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| | |||||||||||| ||||||||| |||||||  |  | ||| ||| |||||||| | ||||| | ||||| ||||||| ||||||    
T  10705408 cgttttcgcctacactctcctgacacttggctctatcataatctac-aactatttcaagtctcaaccactccaaaatcgatttcccaaacctcccataat 10705506  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    | ||  |||| |||||| ||||| | | ||| |||||| |  |||  | ||||| |||| | |||||||| ||||||||||    
T  10705507 ctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaaactccaaaactgatt 10705587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 10919178 - 10919357
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| | |||||||||||| ||||||||| |||||||  |  | ||| ||| |||||||| | ||||| | ||||| ||||||| ||||||    
T  10919178 cgttttcgcctacactctcctgacacttggctctatcataatctac-aactatttcaagtctcaaccactccaaaatcgatttcccaaacctcccataat 10919276  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    | ||  |||| |||||| ||||| | | ||| |||||| |  |||  | ||||| |||| | |||||||| ||||||||||    
T  10919277 ctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaaactccaaaactgatt 10919357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 26921907 - 26921848
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||| || |||||||||| ||||| |||||||||||| | |||||||    
T  26921907 catcagattttcaacctacatgttttcgcgcataaaaatcaaaccgttaatctgttttcg 26921848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 45314466 - 45314368
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| || |||||| ||||| |||||||| ||||||| | ||| ||| ||| ||||||| |||||||||   ||||||||| |||||||||    
T  45314466 cgttttcgcctacacgatcctgatacttaactctatcataatctacag-aaatttcaagtctcaaccatcccaaaaatcattttccaaaatctcacataa 45314368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 18293457 - 18293362
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcac 148  Q
    |||||||||||||| ||||||||||||||  ||||| || ||||||   | |||||||| |||||||||| ||||||| ||  |||||||||||||||    
T  18293457 ccgttttcgcctacacgctcctgacacttgactctaacataatcta--tagaaattccatgtttcaaccatcccaaaagttattttccaaaacctcac 18293362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15373944 - 15374001
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| ||||||||||||||  | ||||| |||||  |||||||||||||||    
T  15373944 tcagattttcaaccttcacgttttcggacataaaaatcaaatggttaacccgttttcg 15374001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 7132660 - 7132559
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   ||| |||||||||||||    
T  7132660 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcatttttcaaaacctcacat 7132563  T
Q  151 aatc 154  Q
    ||||    
T  7132562 aatc 7132559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 7132704 - 7132664
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  7132704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 7132664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 20000340 - 20000380
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  20000340 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 20000380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 20000384 - 20000485
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| ||| |||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  20000384 ccgttttcgcctacatgctcctaacacttggcactatcataatttac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 20000481  T
Q  151 aatc 154  Q
    ||||    
T  20000482 aatc 20000485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 7e-95; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 36167140 - 36167400
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgt------------tttcgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||            |||||||||||||||||||||||||||||||||    
T  36167140 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 36167239  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||    
T  36167240 cacaatctacagaaagattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgccaaaacatttagacaccgactcttc 36167339  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36167340 aagcgaaaatcccaattttcatcaatccaaactcaaaaactgattaggaatttaacctatg 36167400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 10550913 - 10551173
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgt------------tttcgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||            |||||||||||||||||| ||||||||||||||    
T  10550913 catcagattttcacccttcacgttttcgcgcctaaaaataaaaccgttaatccgttttcgatgccgttttcgcctacgcgctcctaacacttagctctat 10551012  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||| |||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  10551013 cacaatatacaaaaaaaatccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacaccgactcttc 10551112  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10551113 aagcgaaaatcccaattttcatcaatccaaactcaaaaactgattaggaatttaacctatg 10551173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 21618991 - 21619251
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgt------------tttcgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||            |||||||||||||||||||||||||| ||||||    
T  21618991 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttaactctat 21619090  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| |  |||    
T  21619091 cacaatctacagaaaaattacagtttcaaccacccaaaaatcggtttccaaaacctcacataatccctcatttgccaaaacatttagacaccgtctcttc 21619190  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || | ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21619191 aagcaaaaatctcaattttcatcaatccaaactcaaaaactgattaggaatttaacctatg 21619251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 12536326 - 12536506
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  12536326 cgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccatccaaaaattggtttccagaacctcacataat 12536425  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    | || |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  12536426 cacttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaagccaaacccaaaaactgatt 12536506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 37641935 - 37641696
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||            ||||||||| ||||||||||||||||||||||||    
T  37641935 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 37641836  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || ||||||| |||| |||||||||||||  |||||    
T  37641835 taatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgcataaacgtttagacaccgactattcaa 37641736  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaaactg 231  Q
     ||||||||| |||||||||||| |||||| |||||||||    
T  37641735 gcgaaaatcccaattttcatcaacccaaacccaaaaactg 37641696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 29172289 - 29172072
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||            ||||  ||||||||||||||||||||||||    
T  29172289 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 29172190  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||||    
T  29172189 taatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcgcttatttgc-aaaacgtttagacaccga-ctttcaa 29172092  T
Q  192 tcgaaaatccaaattttcat 211  Q
      |||||||| |||||||||    
T  29172091 gggaaaatcccaattttcat 29172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 22147197 - 22146963
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||            ||||||||  ||||||||||||||||| ||||||    
T  22147197 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 22147098  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||||||   |||||    
T  22147097 taatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacatttagacaccgaatcttcaa 22146999  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaa 227  Q
     ||||||| | | |||||||||| |||||| |||||    
T  22146998 gcgaaaattccagttttcatcaacccaaacccaaaa 22146963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 34851677 - 34851520
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||| || | |||||||||||||||||||    
T  34851677 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatttaagtttcaaccacccaaatatcgatttccaaaacctcacataa 34851578  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcat 211  Q
    || || |||||| ||||| |||| ||||||||  |||||  |||||||| |||||||||    
T  34851577 tcacttatttgc-aaaacgtttatacaccgactcttcaagggaaaatcccaattttcat 34851520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 9511296 - 9511115
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||  ||| ||| ||||||| ||||| |||   ||||| |||| |||||||    
T  9511296 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaat-ttcaagtctcaaccatcccaagaatcattttcccaaacgtcacata 9511198  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    |||  | |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| | ||||||||||    
T  9511197 atcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaaaccccaaaactgatt 9511115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 9519271 - 9519090
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||  ||| ||| ||||||| ||||| |||   ||||| |||| |||||||    
T  9519271 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaat-ttcaagtctcaaccatcccaagaatcattttcccaaacgtcacata 9519173  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    |||  | |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| | ||||||||||    
T  9519172 atcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaaaccccaaaactgatt 9519090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 17547844 - 17547693
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||  |||||  |||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  17547844 cgttttcgcctacacgctcctgacacttagccttatcattatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataat 17547745  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattt 207  Q
    |||| ||||||  |||| ||||||||| ||| ||||||  |||||||| |||||    
T  17547744 cgcttatttgc--aaacgtttagacactgacttttcaagggaaaatcccaattt 17547693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 13511677 - 13511899
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||| ||| |||||  |||||||||||||||||||||            ||||| ||||||||| ||||||||||||||    
T  13511677 tcagattttcaaccttcacgttttcccgcataaaaaccaaaccgttaacccgttttcgatgccgttttctcctacacgctcctgaaacttagctctatca 13511776  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaa---ttggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgaccttt 188  Q
     ||||||| ||||||||| |||||||||||||||||||   |   ||||| ||||||||||| |||||| |||||||||| | ||||||||||||| |||    
T  13511777 taatctacagaaaaattcaagtttcaaccacccaaaaaaaatctatttcccaaacctcacattatcgcttatttgcaaaa-cgtttagacaccgactttt 13511875  T
Q  189 caatcgaaaatccaaattttcatc 212  Q
    ||| ||||||||| ||||| ||||    
T  13511876 caaacgaaaatcccaatttccatc 13511899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 212
Target Start/End: Complemental strand, 24340321 - 24340163
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  24340321 ccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 24340222  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| |||||||||||||  ||||| | ||||||| ||||| ||||    
T  24340221 tctcttatttgc-aaaacgtttagacaccgactattcaaacaaaaatcccaatttccatc 24340163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 52338390 - 52338171
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||            ||||  | ||||||||||||||||||||||    
T  52338390 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgtttttgcctaaactctcctgacacttagctctatca 52338291  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||| | ||||||| ||||| |||| ||||||||| | | |||||||||||||| |||| || |||||| ||||| ||||||||||||| ||||||    
T  52338290 taatctacaggaaaattcaagttttaaccgcccaaaaatcgatctccaaaacctcacacaatcacttatttgc-aaaacgtttagacaccgacttttcaa 52338192  T
Q  192 tcgaaaatccaaattttcatc 212  Q
     ||||||||| ||||| ||||    
T  52338191 acgaaaatcccaatttccatc 52338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 11849970 - 11849818
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| | | |||||| |||||| ||||     
T  11849970 ccgttttcgcctacgcgcttctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaactcgatttccagaacctcgcatac 11849871  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaatttt 208  Q
    ||     ||||||||||| ||||||||||||  |||||| ||||||||| ||||||    
T  11849870 tc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatcccaatttt 11849818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 13667460 - 13667306
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||| |||| | || ||||||||||||| |||||| | ||||| ||||||| ||||||    
T  13667460 cgttttcgcctacacgctcctgacacttaactctatcataatctacagaaagactcaagtttcaaccacctaaaaatcgatttcccaaacctcgcataat 13667361  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
    | || |||||| ||||| ||||||||||||  |||||| ||||||||| |||||||    
T  13667360 ctcttatttgc-aaaacgtttagacaccgagttttcaagcgaaaatcccaattttc 13667306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 15517327 - 15517473
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||| || ||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||   ||| |||||||||||||||    
T  15517327 ccgttttcgcctacacgctcctaactcttagctctatcataatctacagaaaaattcaagtttcaactacccaaaaatcaattttcaaaacctcacataa 15517426  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatc 200  Q
    || || |||||| ||||| ||||||||| ||| |||||| ||||||||    
T  15517427 tcacttatttgc-aaaacgtttagacactgacttttcaagcgaaaatc 15517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 45530984 - 45530816
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaa---ttggtttccaaaacctcaca 149  Q
    |||||||| |||||  | ||||||||||| || |||||| ||||||| ||||||||| |||| ||||||||||||||   ||| |||||||| |||||||    
T  45530984 ccgttttcacctacatgttcctgacacttggccctatcataatctacagaaaaattcaagttccaaccacccaaaaaaaattgatttccaaa-cctcaca 45530886  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    ||||| |  |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  45530885 taatcccctatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcctaattttcatcaacccaa 45530816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 12158894 - 12159117
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||            ||||| ||||| ||||||||| ||||||||    
T  12158894 tcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgctc-tgacacttaactctatca 12158992  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaa-----ttggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacct 186  Q
     ||| ||| ||||||||| |||||||||||||||||||     | | ||||| |||||||| |||||| || |||||||||| | ||||||||||||| |    
T  12158993 taatttacagaaaaattcaagtttcaaccacccaaaaaaaaaatcgatttcccaaacctcagataatctcttatttgcaaaa-cgtttagacaccgactt 12159091  T
Q  187 ttcaatcgaaaatccaaattttcatc 212  Q
    ||||| ||||||||| ||||| ||||    
T  12159092 ttcaaacgaaaatcccaatttccatc 12159117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 20188400 - 20188554
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccag-tttcaaccacccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| || |||||||||||| ||| | | |||||| |||||||||||    
T  20188400 ccgttttcgcctacgcgttcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccaccccaaactcgatttccagaacctcacata 20188499  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
     ||     ||||||||||| ||||||||||||  |||||| ||||||||| |||||||    
T  20188500 ctc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatcccaattttc 20188554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 37038721 - 37038882
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||| |  |  ||| ||| ||||||| ||||| |||   ||||||||||||||||||    
T  37038721 ccgttttcgcctacacgctcctgaaacttggctctatcataatctacagctat-ttcaagtctcaaccatcccaagaatcattttccaaaacctcacata 37038819  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || |||||||||||| ||||||||||||| |||||| ||||||||  ||||||||||||    
T  37038820 atcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatcaa 37038882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 14818700 - 14818895
Alignment:
Q  8 attttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatcacaat 95  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||| | |||||||            |||||  | |||||||||||||| |||||| |||    
T  14818700 attttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacatgttcctgacacttagccctatcataat 14818799  T
Q  96 ctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     |||  ||| |||| |||||||||||||| |||||   ||||| ||||||||||||||| || |||||||||||||||||||| ||||| ||||||    
T  14818800 atacataaagattcaagtttcaaccaccccaaaatctatttcccaaacctcacataatctcttatttgcaaaaacatttagactccgacttttcaa 14818895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 23395391 - 23395314
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaat 130  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||  ||| |||| ||||||||||||||||||||    
T  23395391 ccgttttcgcctacacgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaaaat 23395314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 52212789 - 52212648
Alignment:
Q  71 tcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaac 170  Q
    |||||||||||||| |||||| ||||||| |||| |||| |||||||||||||| ||||| | ||||| || |||||||||||| || |||||||||||     
T  52212789 tcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccccaaaatcgatttcccaagcctcacataatctcttatttgcaaaaat 52212690  T
Q  171 atttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
     |||| || ||||| |||||| || |||| | ||||| ||||    
T  52212689 gtttacactccgacttttcaagcgtaaattccaatttccatc 52212648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 214
Target Start/End: Complemental strand, 42324350 - 42324190
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||| ||| ||||||| ||||| |||   ||||  |||||||||||||    
T  42324350 cgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttcaagtctcaaccatcccaagaatcattttctcaaacctcacataa 42324252  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    |  || |||||||||||| ||||||||||||| |||||| ||||||||  ||| ||||||||    
T  42324251 ttccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaa 42324190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 178858 - 178727
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||| ||| ||||||| |||||||||   ||||| ||||||||||||    
T  178858 ccgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttcaagtctcaaccatcccaaaaatcattttcccaaacctcacata 178760  T
Q  152 atcgctcatttgcaaaaacatttagacaccgac 184  Q
    ||| || |||||||||||| ||||||| |||||    
T  178759 atctcttatttgcaaaaacgtttagactccgac 178727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 50351198 - 50351082
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| || |||||||||||| |||||||| ||||||| | ||| ||| ||| ||||||| ||||| ||||  || ||||||||||||||||    
T  50351198 cgttttcgcctacacggtcctgacacttaactctatcataatctacag-aaatttcaagtctcaaccatcccaataattatttcccaaaacctcacataa 50351100  T
Q  153 tcgctcatttgcaaaaac 170  Q
    || || ||| ||||||||    
T  50351099 tcacttattggcaaaaac 50351082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 54038877 - 54038776
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||  ||||| || |||||||  |||||||||| |||||||||| |||||||||   |||||||||||||| ||    
T  54038877 ccgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaattccatgtttcaaccatcccaaaaatcattttccaaaacctcatat 54038780  T
Q  151 aatc 154  Q
    ||||    
T  54038779 aatc 54038776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 8604447 - 8604619
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||| | |||||||            |||||  | |||||||||||||| ||||    
T  8604447 catcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagccctat 8604546  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcattt 162  Q
    || ||| ||| ||||||||| ||||||||| |||| ||| |   |||||||||||| ||| || | |||||||    
T  8604547 cataatgtacagaaaaattcaagtttcaacaaccccaaattcattttccaaaaccttacacaaacactcattt 8604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 11061818 - 11061759
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | ||||||||||||||| ||||| |||||||||||| |||||||||    
T  11061818 catcagattttcaacattcacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 11061759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 17100090 - 17100149
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| ||||||| |||||||||    
T  17100090 catcagattttcaaccttcacgttttcgcgcataaaaatcaatccgttaatccgttttcg 17100149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 19568480 - 19568421
Alignment:
Q  160 tttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    ||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  19568480 tttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 19568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 40039488 - 40039391
Alignment:
Q  57 tttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataatc 154  Q
    ||||||| || |||||||||||||||||||||||| ||||||| | ||| ||| ||||| ||||| ||||| |||   |||||||||||||||||||||    
T  40039488 tttcgcccacacgctcctgacacttagctctatcataatctacag-aaatttcaagtttaaaccatcccaagaatcattttccaaaacctcacataatc 40039391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 237
Target Start/End: Complemental strand, 13029537 - 13029354
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |   | ||| ||| ||||||| |||||||||   ||||| ||||||||||||    
T  13029537 ccgttttcgcctacactctcctgacacttggctctatcataatctacag-ctatttcaagtctcaaccatcccaaaaatcattttcccaaacctcacata 13029439  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattagg 237  Q
    ||| || |||||| ||||| |||| ||  |||| |||||| ||||||  | ||||| |||  | |||||| | |||||||||||||    
T  13029438 atctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccattgacccaaaccccaaaactgattagg 13029354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 16934580 - 16934479
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  16934580 ccgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 16934483  T
Q  151 aatc 154  Q
    ||||    
T  16934482 aatc 16934479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 13968238 - 13968179
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  | |||||||||||||||||||    
T  13968238 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcg 13968179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 13973713 - 13973654
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  | |||||||||||||||||||    
T  13973713 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcg 13973654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 11882860 - 11882802
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttc 60  Q
    ||||| ||||||| ||||||||||||||||| ||||| |||||||||||| | ||||||    
T  11882860 catcatattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttc 11882802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 18366888 - 18366704
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| | || ||||||||| ||||||||| |||||||  |  | ||| ||| ||||  |||||||| | | ||||| |||||||||||||    
T  18366888 ccgttttcgcctacactcttctgacacttggctctatcataatctaca-actatttcaagtctcaaaaacccaaaa-tcgatttcccaaacctcacataa 18366791  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaa 239  Q
    || |   ||||||||||| ||||||| ||||| ||||||||  |||| | || || |||| | |||||||| | |||||||| ||||    
T  18366790 tctcatgtttgcaaaaacgtttagactccgacttttcaatcataaattccaacttccatcgacccaaactccataactgattgggaa 18366704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 237
Target Start/End: Complemental strand, 13025945 - 13025762
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |   | ||| ||| ||||||| |||||||||   ||||| |||||||| |||    
T  13025945 ccgttttcgcctacactctcctgacacttggctctatcataatctacag-ctatttcaagtctcaaccatcccaaaaatcattttcccaaacctcaaata 13025847  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattagg 237  Q
    ||| || |||||| ||||| |||| ||  |||| |||||| ||||||  | ||||| |||  | |||||| | |||||||||||||    
T  13025846 atctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccattgacccaaaccccaaaactgattagg 13025762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 24340382 - 24340325
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| |||||||||||| |  | ||||| ||||||||||||||||||||||    
T  24340382 tcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcg 24340325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 15045725 - 15045669
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattc 109  Q
    ||||||||||||||||| |||| |||||||| ||| ||||| ||||| |||||||||    
T  15045725 ccgttttcgcctacgcgttccttacacttagttctttcacattctacagaaaaattc 15045669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 18910654 - 18910755
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  18910654 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 18910751  T
Q  151 aatc 154  Q
    ||||    
T  18910752 aatc 18910755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 13327182 - 13327123
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||| ||||||| ||||||||||||||| | ||||| |||||||||||| | |||||||    
T  13327182 catcaaattttcaaccttcacgttttcgcacataaaaatcaaaccgttaaactgttttcg 13327123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 13968175 - 13968100
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  13968175 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 13968100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 13973650 - 13973575
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  13973650 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 13973575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 38167365 - 38167408
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  38167365 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcg 38167408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 51961778 - 51961719
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  51961778 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 51961719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 53770478 - 53770537
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  53770478 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 53770537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 17758824 - 17758759
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca 121  Q
    |||||||||||| | ||||| |||||||||||||||| ||||||| | ||| ||| |||||||||||    
T  17758824 gttttcgcctacacactcctaacacttagctctatcataatctacag-aaatttcaagtttcaacca 17758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 19060144 - 19060079
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca 121  Q
    |||||||||||| | ||||| |||||||||||||||| ||||||| | ||| ||| |||||||||||    
T  19060144 gttttcgcctacacactcctaacacttagctctatcataatctacag-aaatttcaagtttcaacca 19060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 38167412 - 38167478
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||| ||||| | ||||||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  38167412 ccgttttcacctacacactcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 38167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 53770541 - 53770607
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    ||||||||||||||  |||||| ||||||||| |||||| |||  || ||||||| |||||||||||    
T  53770541 ccgttttcgcctacatgctcctaacacttagcactatcataatgcacagaaaaatcccagtttcaac 53770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 3394130 - 3394085
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    ||||||||||||| | |||||||||||| ||||||||| |||||||    
T  3394130 cgttttcgcctacactctcctgacacttggctctatcataatctac 3394085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 17513502 - 17513539
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatc 90  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  17513502 ccgttttcgcctacacgctcctgacacttggctctatc 17513539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 12276533 - 12276601
Alignment:
Q  115 tcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccga 183  Q
    |||||||||| ||||| | ||||| |||||||| |||||| ||  ||||||||||| ||||||| ||||    
T  12276533 tcaaccaccccaaaatcgatttcccaaacctcagataatctcttgtttgcaaaaacgtttagactccga 12276601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 18910610 - 18910650
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  18910610 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 18910650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 30206900 - 30206999
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataat 153  Q
    |||||||||||| ||||||||||||||  ||||| || ||| ||| | ||| |||  |||||||||| | |||||||   ||||||||||||||||||||    
T  30206900 gttttcgcctacacgctcctgacacttgactctaacataatttacag-aaatttcatgtttcaaccatctcaaaaatcattttccaaaacctcacataat 30206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 72267 - 72525
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtttt------------cgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||            ||||||||||||||||||||||||||||||    
T  72267 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccattttcgcctacgcgctcctgacacttagctctat 72366  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  |||    
T  72367 cacaatctacagaaaaattcctgtttcaaccacccaaaaatcggtttccaaaatctcacataatcactcatttgtaaaaacatttagacaccgactcttc 72466  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaaccta 248  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  72467 aagcgaaaatcccaattttcatcaatccaaactcaaaaactgattaggaatttaaccta 72525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 18318645 - 18318385
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacc------------cgttttcgcctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||            ||||||||||||||||||||||||||||||||||||    
T  18318645 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacctgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 18318546  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||     
T  18318545 cacaatctaaggaaaaattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacaccgactcttt 18318446  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||||||    
T  18318445 aagcgaaaatcctaatttttatcaacccaaactcaaaaactgattagaaatttaacctatg 18318385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 20765694 - 20765457
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaaccc------------gttttcgcctacgcgctcctgacacttagctctat 89  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||||||            |||||||||||||||||||||||||||||||||||    
T  20765694 catcagattttcactcttcacgttttcacgcctaaaaatcaaaccgttaaccccttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 20765595  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||    
T  20765594 cacaatctacagaaaaattccagtttcaaccacccaaaaataggtttccaaaacctcacataatcactcatttgc-aaaacatttagacaccgactcttc 20765496  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaa 228  Q
    || ||||||||  ||||||||| ||||||||||||||||    
T  20765495 aagcgaaaatctcaattttcattaatccaaactcaaaaa 20765457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 8952478 - 8952235
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    |||||||||| || ||||||||||||||||| |||||  |||||||||||||||||||||            ||||| ||||||||||||||||||||||    
T  8952478 catcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctat 8952379  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    || ||||||| ||||||||| ||||||||||||| |||||| | ||||| ||||||||||||||| || |||||| ||||| ||||||||||||| ||||    
T  8952378 cataatctacagaaaaattcaagtttcaaccacctaaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgacttttc 8952280  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || ||||||||| ||||| |||| |  ||||||| || |||||||    
T  8952279 aaacgaaaatcccaatttccatcgactcaaactccaatactgatt 8952235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 201
Target Start/End: Complemental strand, 21297733 - 21297586
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| | ||||||||  |||||||||||||||||||| | |||||| ||||| |||||||    
T  21297733 cgttttcgcctacacgctcctgacacttagctctatcataatctccagaaaaattaaagtttcaaccacccaaaaatcgatttccagaaccttacataat 21297634  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcc 201  Q
    | || |||||||||||| |||||||| |||| |||||| |||||||||    
T  21297633 cacttatttgcaaaaacgtttagacagcgacttttcaagcgaaaatcc 21297586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 21311277 - 21311130
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||  |||||| ||||||||||||| | |||||| ||||||||||||    
T  21311277 ccgttttcgcctatacgctcctgacacttagctctatcataatctacagaaaaattaaagtttcgaccacccaaaaatcgatttccagaacctcacataa 21311178  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatc 200  Q
    || || |||||||||||| ||||||||||||| ||||||  |||||||    
T  21311177 tcacttatttgcaaaaacttttagacaccgacttttcaagtgaaaatc 21311130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 53 - 227
Target Start/End: Original strand, 40726364 - 40726537
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  ||||||||||||||||| |||||| ||||||  ||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  40726364 ccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataa 40726463  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaa 227  Q
    || || |||||| ||||| ||||||||||||   ||||| ||||||| | | |||||||||| |||||| |||||    
T  40726464 tcacttatttgc-aaaacgtttagacaccgaatcttcaagcgaaaattccagttttcatcaacccaaacccaaaa 40726537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 22357277 - 22357111
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||    
T  22357277 ccgttttcgcctacacgctcctgacacttaactctatca-attctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataa 22357179  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaac 221  Q
    || || |||||| ||||| ||||||||||||  |||||| |||| |||| ||||| |||||| ||||||    
T  22357178 tcacttatttgc-aaaacgtttagacaccgatttttcaaacgaagatcccaatttccatcaacccaaac 22357111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 23539440 - 23539555
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  23539440 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagataaattcaagtttcaaccacccaaaaattgatttccagaacctcacataa 23539539  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  23539540 tcacttatttgcaaaa 23539555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 22777444 - 22777264
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||| ||||||||| |||||||| ||||||| |||| |||| |||||||||| ||||||||| | ||||| |||||||||||||    
T  22777444 ccgttttcgcctacacgctcatgacacttaactctatcataatctacagaaagattcaagtttcaaccgcccaaaaatcgatttcccaaacctcacataa 22777345  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||| ||||| |||||||||| |  |||||| ||||||||| ||||| |||||| |||||| | || |||||||    
T  22777344 tctcttatttgc-aaaacgtttagacacctatttttcaaacgaaaatcccaatttccatcaacccaaaccccaatactgatt 22777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 10817487 - 10817665
Alignment:
Q  56 ttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcg 155  Q
    ||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||| | |||||| ||||||| |||||      
T  10817487 ttttcgcctacacgctcctgacacttagctctatcataatctatagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcatataatta 10817586  T
Q  156 ctcatttgcaaaaacatttagacaccgacctttcaatcg-aaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || |||||| ||||| ||||||| ||||  |||||| || ||||||||||||| ||| || |||||| | || |||||||    
T  10817587 cttatttgc-aaaacgtttagacgccgatttttcaaacgaaaaatccaaatttccataaacccaaaccccaatactgatt 10817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 21405920 - 21405842
Alignment:
Q  141 aacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    |||||||||||||| || |||||||||||| ||||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  21405920 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcattaatccaa 21405842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 22007325 - 22007149
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatc 90  Q
    |||||||||||  ||||||||||||||||| |||||  |||||||||||||||||||||            ||||| ||||| ||| || |||| |||||    
T  22007325 atcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatc 22007226  T
Q  91 acaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaa 168  Q
    | ||||||| |||||| || ||||||||| | |||||||| | ||||| ||| ||||||| ||| || ||||||||||    
T  22007225 ataatctaccgaaaaactcaagtttcaacta-ccaaaaatcgatttcccaaaactcacatgatctcttatttgcaaaa 22007149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 21109334 - 21109505
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatc 90  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||||| | |||||||            |||||  | |||||||||||||| |||||    
T  21109334 atcagattttcaaccttcacgttttcgcgcataaatatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagccctatc 21109433  T
Q  91 acaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcattt 162  Q
    ||||| ||| ||||||||  ||||||||| |||| ||| |   |||||||||||||||| || | |||||||    
T  21109434 acaatgtacagaaaaattgaagtttcaacaaccccaaattcattttccaaaacctcacacaaacactcattt 21109505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 40726303 - 40726360
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||||||    
T  40726303 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcg 40726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 21650138 - 21650194
Alignment:
Q  3 atcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtttt 59  Q
    |||||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||    
T  21650138 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgtttt 21650194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 20197715 - 20197664
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaa 104  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| ||||    
T  20197715 ccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaa 20197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 21399179 - 21399049
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| |||||||||||||||  | ||||| ||||||| | ||| ||| ||| ||||||| ||||| |||   || ||||||||||||||||    
T  21399179 cgttttcgcctacacgctcctgacacttaagtttatcataatctacag-aaatttcaagtctcaaccatcccaagaatcatttcccaaaacctcacataa 21399081  T
Q  153 tcgctcatttgcaaaaacatttagacaccgac 184  Q
    || || ||| ||||||||| ||| ||| ||||    
T  21399080 tcacttattggcaaaaacacttaaacatcgac 21399049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 21405983 - 21405938
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||    
T  21405983 cgttttcgcctacacactcctgacacttagctctatcataatctac 21405938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 21204365 - 21204424
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  21204365 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 21204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 22111582 - 22111641
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||||||||||||||| | ||||| |||| ||||||| | |||||||    
T  22111582 catcagattttcaaccttcacgttttcgcacataaaaatcaatccgttaatctgttttcg 22111641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 1220117 - 1220016
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||| ||||||||  ||||| || |||||||  ||||||| || |||| ||||| ||||||| |   |||||||||||||||||    
T  1220117 ccgttttcgcctacacgctcttgacacttgactctaacataatctac--aaaaatttcatgttttaaccatcccaaaagtcattttccaaaacctcacat 1220020  T
Q  151 aatc 154  Q
    ||||    
T  1220019 aatc 1220016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 9730979 - 9730878
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   ||||||||||||||||     
T  9730979 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacac 9730882  T
Q  151 aatc 154  Q
    ||||    
T  9730881 aatc 9730878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 6e-83; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 16448215 - 16447955
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||            |||||||||||||||||| |||||||||    
T  16448215 catcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaaccagttttcgatgccgttttcacctacgcgctcctgacacatagctctat 16448116  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    ||||| |||  |||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  16448115 cacaaactaaagaaaaattacagtttcaaccacccaaaaatcgatttccaaaacctcacataatcactcatttgcaaaaacatttagacaccgactcttc 16448016  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  16448015 aagcgaaaatccaaattatcatcaaaccaaactcaaaaactgattaggaatttaacctatg 16447955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 102 - 250
Target Start/End: Complemental strand, 19102811 - 19102663
Alignment:
Q  102 aaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcc 201  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||  ||||| |||||||||    
T  19102811 aaaaattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacttactcttcaagcgaaaatcc 19102712  T
Q  202 aaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
     ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19102711 caattttcatcaattcaaactcaaaaactgattaggaatttaacctatg 19102663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 18259612 - 18259372
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||| | ||||||||||||||||||||||            ||||  ||||||||||||||||||||||||    
T  18259612 tcagattttcaaccttcacgttttcgcacataataatcaaaccgttaacccgttttcgatgccgtttttgcctaaacgctcctgacacttagctctatca 18259513  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| || |||||| ||||| || | |||||||| ||||||    
T  18259512 taatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcacttatttgc-aaaacgttcaaacaccgacttttcaa 18259414  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
     ||||||||| ||||||||| || || ||||| ||||||||||    
T  18259413 gcgaaaatcccaattttcattaa-cccaactccaaaactgatt 18259372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 201
Target Start/End: Complemental strand, 31468154 - 31468007
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    |||||| |||||| ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||| |||||||||||||    
T  31468154 cgtttttgcctacacgctcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataat 31468055  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcc 201  Q
    | || |||||||||||| ||||||||||||| |||||| |||||||||    
T  31468054 cacttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcc 31468007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 13750715 - 13750471
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg-----------cctacgcgctcctgacacttagctctatc 90  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| ||||| | |||||||           |||||  |||||||||||||||| |||||    
T  13750715 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgccttttcacctacatgctcctgacacttagccctatc 13750616  T
Q  91 acaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttca 190  Q
    | ||||||| |||| |||| |||||||||||||||||||| | ||||| ||||||||||||||| || |||||||||||| ||||||||||||| |||||    
T  13750615 ataatctacagaaagattcaagtttcaaccacccaaaaatcgatttcc-aaacctcacataatctcttatttgcaaaaacgtttagacaccgacttttca 13750517  T
Q  191 atcgaaaatccaaattttcatcaatccaaactcaaaaactgattag 236  Q
    |  |||||||| ||||| |||| | |||||| | |||| |||||||    
T  13750516 agtgaaaatcccaatttccatcgacccaaaccccaaaattgattag 13750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 234
Target Start/End: Complemental strand, 29415932 - 29415751
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaa--ttccagtttcaaccacccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||  ||| |||||||||||||||||||||| ||||| ||||||||||||    
T  29415932 cgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaagattcaagtttcaaccacccaaaaattgatttcccaaacctcacata 29415833  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||| || |||||| ||||| ||||||||||||  |||||| ||||||||  ||||| |||||| |||||| | || |||||||    
T  29415832 atctcttatttgc-aaaacgtttagacaccgatttttcaaacgaaaatcgcaatttccatcaacccaaaccccaatactgatt 29415751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 5110089 - 5109909
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| || ||||||||||| |||||||| | ||||| |||||||||||||    
T  5110089 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaactcaagtttcaaccaaccaaaaatcgatttcccaaacctcacataa 5109990  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    |  || |||||| ||||| ||||||||||||  |||||| ||||||||| ||||| |||||| |||||| | || |||||||    
T  5109989 tatcttatttgc-aaaacgtttagacaccgatttttcaaacgaaaatcccaatttccatcaacccaaaccccaatactgatt 5109909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 206
Target Start/End: Original strand, 24267519 - 24267671
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||| || | ||||| |||||||||||||    
T  24267519 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccagccaaacatcgatttcccaaacctcacataa 24267618  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaatt 206  Q
    || || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||    
T  24267619 tctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatt 24267671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 8227169 - 8226935
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||            ||||||||  ||||||||||||||||| ||||||    
T  8227169 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 8227070  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||| ||||| ||||||||||||   |||||    
T  8227069 taatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacaccgaatcttcaa 8226971  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaa 227  Q
     ||||||| | | |||||||||| |||||| |||||    
T  8226970 gcgaaaattccagttttcatcaacccaaacccaaaa 8226935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 24441333 - 24441491
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||| |||||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| ||||| |||||||    
T  24441333 ccgtttttgcctacacgctcctgacacttagccctatcataatctacaaaaatattcaagtttcaaccacccaaaaatcgatttcccaaaccccacataa 24441432  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||| ||||    
T  24441433 tctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 24441491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 28948246 - 28948427
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||   ||||||||||||| ||||||||| ||||||| ||||  ||| ||||||||||| ||||| |||   ||||||||||||||||||    
T  28948246 ccgttttcgcctatatgctcctgacacttggctctatcataatctacagaaat-ttcaagtttcaaccatcccaagaatcattttccaaaacctcacata 28948344  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||| || |||||||||||| ||||||||||||| |||||| | ||||| | |||||||||||| |||||| | |||| |||||    
T  28948345 atcccttatttgcaaaaacgtttagacaccgacttttcaagcaaaaattccaattttcatcaacccaaaccccaaaattgatt 28948427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 23532325 - 23532091
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | |||||  |||||||||||||||||            ||||||||  ||| ||||||||||||| ||||||    
T  23532325 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgcacctgacacttagccctatca 23532226  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  |||||| || ||||| |||||||||||||| |||||||||||| |||||||||| || |||||| ||||| ||||||||||||   |||||    
T  23532225 taatctatagaaaaaatcaagtttaaaccacccaaaaatcggtttccaaaacttcacataatcacttatttgc-aaaacgtttagacaccgaatcttcaa 23532127  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaa 227  Q
      |||||||| | ||| |||||| |||||| |||||    
T  23532126 gtgaaaatcccagtttccatcaacccaaacccaaaa 23532091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 5289448 - 5289298
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||   | ||||| |||||||||||||||||| | | |||||| |||||| ||||     
T  5289448 ccgttttcgcctacgcactcctgacacttagctctatcataatctac---agaattcaagtttcaaccacccaaaactcgatttccagaacctcgcatac 5289352  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
    ||     ||||||||||| ||||||||||||  |||||| |||||||||||||||||    
T  5289351 tc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatccaaattttc 5289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 201
Target Start/End: Original strand, 19174844 - 19174990
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||  |||| ||| |||||||| || || |||||   ||||||||||||||||||||    
T  19174844 cgttttcgcctacgcgctcctgacacttaactctatcataatctacataaaa-ttcaagtttcaagcatcccaaaatcattttccaaaacctcacataat 19174942  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcc 201  Q
    |||| |||||||||| |  ||| |||||||| | |||| |||||||||    
T  19174943 cgcttatttgcaaaagcgcttaaacaccgacttctcaaacgaaaatcc 19174990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 20177668 - 20177830
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    ||||||| ||||||||||||| ||||||| ||||||||  ||||||| | ||  | | ||| |||||||||| |||||| | ||||| ||||||||||||    
T  20177668 ccgtttttgcctacgcgctccggacacttggctctatcttaatctacagcaatct-caagtctcaaccaccccaaaaatcgatttcccaaacctcacata 20177766  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaat 215  Q
    ||| || |||||||||||| || | || | ||| |||||| ||||||||| ||||| |||||||    
T  20177767 atcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaat 20177830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 22158323 - 22158161
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    ||||||| ||||||||||||| ||||||| ||||||||  ||||||| | ||  | | ||| |||||||||| |||||| | ||||| ||||||||||||    
T  22158323 ccgtttttgcctacgcgctccggacacttggctctatcttaatctacagcaatct-caagtctcaaccaccccaaaaatcgatttcccaaacctcacata 22158225  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaat 215  Q
    ||| || |||||||||||| || | || | ||| |||||| ||||||||| ||||| |||||||    
T  22158224 atcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaat 22158161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 29847652 - 29847516
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| | |||||||||||| ||||||||| |||||||  |  | ||| ||| |||||||||| ||||| | ||||| ||||||||||||||    
T  29847652 cgttttcgcctacactctcctgacacttggctctatcataatctaca-actatttcaagtctcaaccaccccaaaatcgatttcccaaacctcacataat 29847554  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    | ||  ||||||||||  ||||||| ||||| ||||||    
T  29847553 ctcttgtttgcaaaaatgtttagactccgacttttcaa 29847516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 25753111 - 25753272
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||  | | ||||||| ||||| |||   ||||| ||||||||||||    
T  25753111 ccgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttaaattctcaaccatcccaagaatcattttcctaaacctcacata 25753209  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || |||||||||||| |||||||||| || |||| | ||||||||| ||| ||||||||    
T  25753210 atcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatcaa 25753272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 25755281 - 25755442
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||  | | ||||||| ||||| |||   ||||| ||||||||||||    
T  25755281 ccgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttaaattctcaaccatcccaagaatcattttcctaaacctcacata 25755379  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || |||||||||||| |||||||||| || |||| | ||||||||| ||| ||||||||    
T  25755380 atcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatcaa 25755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 7366190 - 7366105
Alignment:
Q  69 gctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatc 154  Q
    ||||||||||||||||||||||| | | ||| || |||||| ||||||||||| || ||||  | |||||||||||||||||||||    
T  7366190 gctcctgacacttagctctatcatattttacagagaaattcaagtttcaaccatcccaaaacagatttccaaaacctcacataatc 7366105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 16135966 - 16136082
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaat-tggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||||||||||| || |||||||| |||||||   ||||||| |||||||||  ||| |||||    |||| |||||||||||||    
T  16135966 ccgttttcgcctatgcgctcctgacacataactctatcataatctac-ataaaattcaagtttcaacatccccaaaatcacttttcaaaaacctcacata 16136064  T
Q  152 atcgctcatttgcaaaaa 169  Q
    |||||| |||||||||||    
T  16136065 atcgcttatttgcaaaaa 16136082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 24563053 - 24563112
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  | |||||||||||||||||||    
T  24563053 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcg 24563112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 18659110 - 18659247
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttcc-aaaacctcacataa 152  Q
    ||||||||||||| | ||||||| |||| | ||||||| |||||||  |  | ||  ||| |||||||||| ||||| | ||||| ||||||||||||||    
T  18659110 cgttttcgcctacactctcctgaaacttggatctatcataatctaca-actattttaagtctcaaccaccccaaaatcgatttcccaaaacctcacataa 18659208  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || ||  ||||||||||| ||||||| ||||| ||||||    
T  18659209 tctcttgtttgcaaaaacgtttagactccgacttttcaa 18659247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 25650672 - 25650721
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaa 51  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| |||||    
T  25650672 catcagattttcatccttcacgttttcgcgcataaaaatcaaactgttaa 25650721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 5110137 - 5110093
Alignment:
Q  17 cttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||||||| |||||  |||||||||||||||||||||    
T  5110137 cttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcg 5110093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 16231553 - 16231654
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  16231553 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 16231650  T
Q  151 aatc 154  Q
    ||||    
T  16231651 aatc 16231654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 5289495 - 5289452
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  5289495 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcg 5289452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 16132801 - 16132663
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    ||||||||||| || | || ||||||||| ||||||||| ||||||| |  |  ||  ||| |||||||||| |||||| | || || ||||||||||||    
T  16132801 ccgttttcgcccacactcttctgacacttggctctatcataatctacagctatttta-agtctcaaccaccccaaaaatcgattccccaaacctcacata 16132703  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    ||| ||  ||||||||||| ||||||| ||||| ||||||    
T  16132702 atctcttgtttgcaaaaacgtttagactccgacttttcaa 16132663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 24563116 - 24563191
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  24563116 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 24563191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 18087415 - 18087316
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||||    
T  18087415 gttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataa 18087318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 25348029 - 25348075
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||    
T  25348029 ccgttttcgcctacacgctcctgacacttggctctatcttaatctac 25348075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 16231509 - 16231549
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  16231509 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 16231549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 18087461 - 18087421
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  18087461 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 18087421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 23977386 - 23977426
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  23977386 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 23977426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 48274092 - 48274352
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgt------------tttcgcctacgcgctcctgacacttagctctat 89  Q
    |||||||||| ||||||||||||||||||||||||||  |||||| |||||||||            ||||||||||||||||||||||| |||||||||    
T  48274092 catcagatttccacccttcacgttttcgcgcctaaaaaccaaaccattaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctat 48274191  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||    
T  48274192 cacaatctacagaaaaattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacaccgactcttc 48274291  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| |||||||||||||||||||||||||||| |||| ||||| ||| ||||    
T  48274292 aagcgaaaatcccaattttcatcaatccaaactcaaaaactaattaagaatttaacttatg 48274352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 53 - 231
Target Start/End: Complemental strand, 19486342 - 19486165
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  19486342 ccgttttcgcctacacgctcctgacacttagctctatcataatctatagaaaaattcaagtttaaaccacccaaaaatcggtttccaaaacctcacataa 19486243  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactg 231  Q
    || || ||||||| |||| ||||||| |||||  ||||| ||||||||| |||||||||||| |||||| |||||||||    
T  19486242 tcacttatttgcagaaacgtttagacgccgactattcaagcgaaaatcccaattttcatcaa-ccaaacccaaaaactg 19486165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 220
Target Start/End: Original strand, 13256368 - 13256532
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatc 154  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||| | |||||| ||||||||||||||    
T  13256368 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaccaaaaaatcgatttccagaacctcacataatc 13256467  T
Q  155 gctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
     || |||||| ||||| ||||||||||||  |||||| ||||||||| |||||||||||| |||||    
T  13256468 acttatttgc-aaaacgtttagacaccgagttttcaagcgaaaatcccaattttcatcaacccaaa 13256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 10063208 - 10063084
Alignment:
Q  126 aaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaa 225  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||  ||||| ||||||||  ||||||||||||||| |||||||    
T  10063208 aaaatcggttttcaaaacctcacataatcactcatttgcaaaaacatttagacatcgactcttcaagcgaaaatctcaattttcatcaatcctaactcaa 10063109  T
Q  226 aaactgattaggaattgaacctatg 250  Q
    || ||||||||||||| ||||||||    
T  10063108 aatctgattaggaatttaacctatg 10063084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 11054321 - 11054551
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||| | |||||||            ||||   | |||||||||||||| ||||    
T  11054321 catcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctatatgttcctgacacttagccctat 11054420  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaa--ttggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctt 187  Q
    || ||| ||  ||||||||| |||||||||||||||||||  | | |||||||| |||||||||||| || |||||||||||| ||||||||||||| ||    
T  11054421 cataatatatagaaaaattcaagtttcaaccacccaaaaaaatcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttt 11054519  T
Q  188 tcaatcgaaaatccaaattttcatcaatccaa 219  Q
    |||| ||||||||| |||||||||||| ||||    
T  11054520 tcaagcgaaaatcccaattttcatcaacccaa 11054551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 17467761 - 17467607
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccag-tttcaaccacccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||| | | |||||| |||||||||||    
T  17467761 ccgttttcgcctacgcgctcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacctcacata 17467662  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
     ||     ||||||||||| ||||||||||||  |||||| ||||||||| |||||||    
T  17467661 ctc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatcccaattttc 17467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 17585453 - 17585607
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccag-tttcaaccacccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||| | | |||||| |||||||||||    
T  17585453 ccgttttcgcctacgcgctcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacctcacata 17585552  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
     ||     ||||||||||| ||||||||||||  |||||| ||||||||| |||||||    
T  17585553 ctc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatcccaattttc 17585607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 3289136 - 3289021
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||| |||||| || ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||| | ||| || ||||||||||||    
T  3289136 ccgtttttgcctacacgttcctgacacttagctctatcataatctacagaaaatttcaagtttcaaccacccaaaaatcgattttcagaacctcacataa 3289037  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  3289036 tcacttatttgcaaaa 3289021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 37380555 - 37380653
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccag-tttcaaccacccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||| | | |||||| |||||||||||    
T  37380555 cgttttcgcctacgcgctcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacctcacata 37380653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 10063316 - 10063211
Alignment:
Q  6 agattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatcaca 93  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||            ||||||| ||||||||||||||||||||||||    
T  10063316 agattttcacccttcacgttttcgcgcctaaaaatcgaaccgttaacccgttttcgatgccgttttcacctacgcactcctgacacttagctctatcaca 10063217  T
Q  94 atctac 99  Q
    ||||||    
T  10063216 atctac 10063211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 40554890 - 40554707
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatc 154  Q
    |||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||| ||| |||||||||| ||||| | ||||| |||||||||||||||    
T  40554890 gttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttcaagtctcaaccaccccaaaatcgatttcccaaacctcacataatc 40554792  T
Q  155 gctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaa 239  Q
     ||  ||||||||||| |||| || ||||| |||||| |  |||| | ||||| |||||| |||||| | |||||||||| ||||    
T  40554791 tcttgtttgcaaaaacgtttaaactccgacttttcaagcataaattccaatttccatcaacccaaaccccaaaactgattgggaa 40554707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 13699018 - 13698857
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| || |||||| |||||||  |  | ||| ||| ||||||| ||||| |||   ||||| ||||||||||||    
T  13699018 ccgttttcgcctacactctcctgacacttggcgctatcataatctaca-actatttcaagtctcaaccatcccaagaatcattttcccaaacctcacata 13698920  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || |||||||||||| |||||||||| || |||||| ||||||||| ||| ||||||||    
T  13698919 atcccttatttgcaaaaacgtttagacacctacttttcaagcgaaaatcccaatcttcatcaa 13698857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 28720372 - 28720473
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||| | ||| ||| ||| ||||||| ||||| |||   ||||||||||||||||||    
T  28720372 ccgttttcgcctacacgctcctgacacttggctctatcataatctacag-aaatttcaagtctcaaccatcccaagaatcattttccaaaacctcacata 28720470  T
Q  152 atc 154  Q
    |||    
T  28720471 atc 28720473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 8756523 - 8756387
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| | |||||||||||| ||||||||| || |||  |  |  ||| ||| |||||||||| ||||| | ||||| ||||||||||||||    
T  8756523 cgttttcgcctacactctcctgacacttggctctatcataacctatagttat-ttcaagtctcaaccaccccaaaatcgatttcccaaacctcacataat 8756425  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    | ||  ||||||||||| ||||||| ||||| ||||||    
T  8756424 ctcttgtttgcaaaaacgtttagactccgacttttcaa 8756387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 18364709 - 18364585
Alignment:
Q  25 tttcgcgcctaaaactcaaaccgttaacccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc 124  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||||     ||||||||| ||||| | ||||| || |||||| ||||||||||| ||    
T  18364709 tttcgcgcgtaaaattcaaatcgttaatccgttttcgcctacgcgct-----cacttagctttatcatattctacagagaaattcaagtttcaaccatcc 18364615  T
Q  125 aaaaattggtttccaaaacctcacataatc 154  Q
     ||||    |||||||||||| ||||||||    
T  18364614 caaaacatatttccaaaacctaacataatc 18364585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 21734238 - 21734121
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacgg---aaaaattccagtttcaaccacccaaaaattggtttccaaaacctcaca 149  Q
    |||||||||||||  ||||||||| |||||||||||||| ||||||| |   |||||||| ||||||||||| || ||||| | ||||| ||| ||||||    
T  21734238 ccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaattcaagtttcaaccaacc-aaaatcgatttcccaaaactcaca 21734140  T
Q  150 taatcgctcatttgcaaaa 168  Q
    | ||| || ||||||||||    
T  21734139 tgatctcttatttgcaaaa 21734121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 33001837 - 33002014
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | ||||||||||   ||||||||| ||||||  ||||  ||| ||| ||||||| ||||| ||||  ||||| ||||||||||||    
T  33001837 ccgttttcgcctacactctcctgacacg--gctctatcataatctatagaaat-ttcaagtctcaaccatcccaagaattattttcccaaacctcacata 33001933  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||| || ||||| |||||| |||||  |||||| ||| ||  |||||||| |||||||||||| |||||| | |||| |||||    
T  33001934 atcccttatttgtaaaaacgtttag--accgactttttaagagaaaatcccaattttcatcaacccaaaccccaaaattgatt 33002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 3049088 - 3049154
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  3049088 ccgttttcgcctacacgctcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 3049154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 21734798 - 21734680
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacgg----aaaaattccagtttcaaccacccaaaaattggtttccaaaacctcac 148  Q
    |||||||||||||  ||||||||| |||||||||||||| ||||||| |    |||||||| ||||||||||| || ||||| | ||||| ||| |||||    
T  21734798 ccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaaattcaagtttcaaccaacc-aaaatcgatttcccaaaactcac 21734700  T
Q  149 ataatcgctcatttgcaaaa 168  Q
    || ||| || ||||||||||    
T  21734699 atgatctcttatttgcaaaa 21734680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3894477 - 3894533
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  3894477 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 3894533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 13866508 - 13866448
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtt 114  Q
    ||||||||||||| |||||||||||||||||||||||  ||  ||| ||||||||||||||    
T  13866508 cgttttcgcctacacgctcctgacacttagctctatcttaaagtaccgaaaaattccagtt 13866448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 4280734 - 4280793
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  | |||||||||||||||||||    
T  4280734 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcg 4280793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 32494801 - 32494702
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||| ||||||||  ||||| || |||||||  |||||||||| |||||||||| ||||||| |   |||||||||||||||||    
T  32494801 ccgttttcgcctacacgctcatgacacttgactctaacataatctac--aaaaattccatgtttcaaccatcccaaaagtcattttccaaaacctcacat 32494704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 16383419 - 16383519
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| || |||| ||||| | |||||||| |||||||  |||| ||  ||||||||||| |||||||||   |||||||||||||||||||    
T  16383419 cgttttcgcctacacgttcctaacactaaactctatcataatctac-aaaaatttaaagtttcaaccatcccaaaaatcattttccaaaacctcacataa 16383517  T
Q  153 tc 154  Q
    ||    
T  16383518 tc 16383519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 19486403 - 19486346
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| ||||||||||||||| | |||||  ||| |||||||||||||||||    
T  19486403 tcagattttcaaccttcacgttttcgctcataaaaaccaatccgttaacccgttttcg 19486346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 112081 - 112026
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttc 60  Q
    |||||||||| ||| ||||||||||||| ||| | |||||||||||| ||||||||    
T  112081 cagattttcaacctccacgttttcgcgcataataatcaaaccgttaatccgttttc 112026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 4280797 - 4280872
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  4280797 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 4280872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17467808 - 17467765
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  17467808 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcg 17467765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 21734861 - 21734802
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||| ||||||| ||| |||||  |||||||||||||||||||||    
T  21734861 catcagattttcgaccttctcgttttcacgcataaaaaccaaaccgttaacccgttttcg 21734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25123895 - 25123954
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  25123895 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 25123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 37784734 - 37784671
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttc 116  Q
    |||||||| |||||  | |||||||||||||| |||||| ||||||| ||||||||| ||||||    
T  37784734 ccgttttcacctacatgttcctgacacttagccctatcataatctacagaaaaattcaagtttc 37784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37784797 - 37784738
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||||||| ||||||| | ||||| |||||||||||| | |||||||    
T  37784797 catcagattttcaaccttcacattttcgctcataaaaatcaaaccgttaatctgttttcg 37784738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 42057107 - 42057048
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  42057107 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 42057048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 2190930 - 2190864
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    ||||||||||||||  |||||| ||||||||| |||||| |||  || ||||||| |||||||||||    
T  2190930 ccgttttcgcctacatgctcctaacacttagcactatcataatgcacagaaaaatcccagtttcaac 2190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 8249524 - 8249443
Alignment:
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    |||||| |||||||||| | ||||||||||||| |||||| ||||||||| ||||| |||| |  ||||||| || |||||||    
T  8249524 atcgcttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatcgactcaaactccaatactgatt 8249443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 48744205 - 48744251
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    |||||||||||||| ||||||||||| |||||||||||  |||||||    
T  48744205 ccgttttcgcctacacgctcctgacagttagctctatcttaatctac 48744251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 15951385 - 15951287
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||| ||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   ||||||||||||||||||    
T  15951385 cgttttcgcctacacgctcttgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacata 15951288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 370704 - 370744
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  370704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 370744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 370748 - 370849
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   ||||||||||||||||     
T  370748 ccgttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacac 370845  T
Q  151 aatc 154  Q
    ||||    
T  370846 aatc 370849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 13757987 - 13758027
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  13757987 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 13758027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 13758031 - 13758132
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| ||| |||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  13758031 ccgttttcgcctacatgctcctaacacttggcactatcataatttac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 13758128  T
Q  151 aatc 154  Q
    ||||    
T  13758129 aatc 13758132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 14251493 - 14251392
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||| | |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  14251493 ccgttttcgcctacatgctcctaacacttggcactattataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 14251396  T
Q  151 aatc 154  Q
    ||||    
T  14251395 aatc 14251392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 14251537 - 14251497
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  14251537 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 14251497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15525383 - 15525327
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttt 58  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| ||||||    
T  15525383 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttt 15525327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26071070 - 26071014
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| |||  |||||||||||| ||||| |||||||||||| | |||||||    
T  26071070 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcg 26071014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26094857 - 26094801
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| |||  |||||||||||| ||||| |||||||||||| | |||||||    
T  26094857 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcg 26094801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 117038 - 117299
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttt------------tcgcctacgcgctcctgacacttagctctat 89  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||            ||||||||||||||||||||| |||||||||    
T  117038 catcaaattttcacccttcacgtttttgcgcctaaaaatcaaaccgttaacccgtttacgatgctgttttcgcctacgcgctcctgacacatagctctat 117137  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    |||||||||| ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||| |||||||||||||||||||  |||    
T  117138 cacaatctacagaaaaattccagtttcaaccacccaaaatacggtttctaaaacctcacataatcactcatttgc-aaaacatttagacaccgactcttc 117236  T
Q  190 aatcgaaaatccaaattttcatcaatccaaactc--aaaaactgattaggaattgaacctatg 250  Q
    || ||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  117237 aagcgaaaatcccaattttcatcaatccaaactcaaaaaaactgattaggaatttaacctatg 117299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 75464 - 75645
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  75464 ccgttttcgcctacgcgctcctgacatttagctctataataatctacagaaaaattcaagtttcaaccacccaaaaatcggtttccagaacctcacataa 75563  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||||||||| ||||||||||||| |||||| | |||||||||||||||||||| |||||| | ||||||||||    
T  75564 tcacttatttgcaaaaacgtttagacaccgacttttcaagcaaaaatccaaattttcatcaacccaaaccccaaaactgatt 75645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 72614 - 72797
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaat---tccagtttcaaccacccaaaaattggtttccaaaacctcaca 149  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||| ||||||    || |||||||||||||||||||| |||||||| |||||||||    
T  72614 ccgttttcgcctacacgctcctgacacttagctctataataatctacagaaaaaaaaatcaagtttcaaccacccaaaaatcggtttccagaacctcaca 72713  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||||| || |||||||||||| ||||||||||||| |||||| ||||||||| |||| ||||||| |||||| | ||||||||||    
T  72714 taatcacttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcc-aattatcatcaacccaaacgccaaaactgatt 72797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 60101 - 60281
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  60101 ccgttttcgcctacacgctcctgacacttagcactatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 60200  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||| ||||| ||||| ||||||  |||||| ||||||||| ||||| |||||| |||||| | || |||||||    
T  60201 tctcttatttgc-aaaacgtttagtcaccgatttttcaaacgaaaatcccaatttccatcaacccaaacccgaatactgatt 60281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 40650 - 40412
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||            ||||  ||||||||||||||||||||||||    
T  40650 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 40551  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     |||||||  ||| |||| |||||||||||||||||||| | ||||||||||||||||||||| || ||||||| |||| ||||||||| |||   ||||    
T  40550 taatctacaaaaagattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcacttatttgcataaacgtttagacactgactactcaa 40451  T
Q  192 tcgaaaatccaaattttcatcaatccaaactcaaaaact 230  Q
     ||||||||| |||||||||||| |||||| ||||||||    
T  40450 gcgaaaatcccaattttcatcaacccaaacccaaaaact 40412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 25807 - 25988
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||  ||||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  25807 ccgttttcgcctacacgctcctgacacttagctctatcatattctatagaaaaattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 25906  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||||||||| ||||||| ||||| |||||| || |||| | ||||| |||| | |||||| | ||||||||||    
T  25907 tctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattccaatttccatcgacccaaaccccaaaactgatt 25988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 18824232 - 18824439
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtttt------------cgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||            ||||||| ||||||||||||||||||||||||    
T  18824232 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgacacttagctctatca 18824331  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||| ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||| || |||||| ||||| ||||||||||||| ||||||    
T  18824332 taatctacagaaaaattcaagtttcaaccacctaaaaattgatttcccaaacctcacataatctcttatttgc-aaaacctttagacaccgacttttcaa 18824430  T
Q  192 tcgaaaatc 200  Q
     ||||||||    
T  18824431 acgaaaatc 18824439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 13528087 - 13527936
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  13528087 cgttttcgcctacacgctcctgacacttagccttatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataat 13527988  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattt 207  Q
    |||| ||||||  |||| ||||||||||||| ||||||  |||||||| |||||    
T  13527987 cgcttatttgc--aaacgtttagacaccgacttttcaagggaaaatcccaattt 13527936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 18270998 - 18271165
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  18270998 ccgttttcgcctacacgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 18271097  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaac 221  Q
    || || |||||| ||||| |||||||||| |  |||||| ||||||||| ||||| |||||| ||||||    
T  18271098 tctcttatttgc-aaaacgtttagacaccaatttttcaaacgaaaatcccaatttccatcaacccaaac 18271165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 18275652 - 18275819
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  18275652 ccgttttcgcctacacgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 18275751  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaac 221  Q
    || || |||||| ||||| |||||||||| |  |||||| ||||||||| ||||| |||||| ||||||    
T  18275752 tctcttatttgc-aaaacgtttagacaccaatttttcaaacgaaaatcccaatttccatcaacccaaac 18275819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 234
Target Start/End: Complemental strand, 7320971 - 7320793
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| | ||||| ||| ||||| |||||||||||||| | |||||| |||||||||||||    
T  7320971 cgttttcgcctacacgctcctgacacttagctctatcataatctgcagaaaa-ttcaagttttaaccacccaaaaatcgatttccagaacctcacataat 7320873  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    | || |||||||||||| |||| |||||||| |||||| || |||||  ||||||||||||  ||||| | ||||||||||    
T  7320872 cacttatttgcaaaaacgtttatacaccgacttttcaagcg-aaatcacaattttcatcaactcaaaccctaaaactgatt 7320793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 20058157 - 20058312
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||  ||||| || |||||||||||||||||||| |||||||| ||||||||||||    
T  20058157 ccgttttcgcctacacgctcctgacagttagctctatcataatctacaaaaaaaatcaagtttcaaccacccaaaaatcggtttccagaacctcacataa 20058256  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
    |  || |||||| ||||| |||||||||| || |||||| ||||||||| |||||||    
T  20058257 ttacttatttgc-aaaacgtttagacaccaacttttcaagcgaaaatcccaattttc 20058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 21473465 - 21473623
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||  ||| |||| |||||||||||||||||||| | ||||| |||||||||||||    
T  21473465 ccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 21473564  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| |||||||||||||  ||||| ||||||||| ||||| ||||    
T  21473565 tctcttatttgc-aaaacgtttagacaccgactattcaaacgaaaatcccaatttccatc 21473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 219
Target Start/End: Original strand, 51476664 - 51476831
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaa--ttggtttccaaaacctcacat 150  Q
    |||||||| |||||  | |||||| ||||||| |||||| ||||||| ||||||||| |||||||||||||||||||  | | |||||||| |||||||     
T  51476664 ccgttttcacctacatgttcctgaaacttagccctatcataatctacagaaaaattcaagtttcaaccacccaaaaaaatcgatttccaaa-cctcacac 51476762  T
Q  151 aatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    |||| || |||| ||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  51476763 aatcccttatttacaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 51476831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 52983836 - 52984037
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||| |||||||||||| |||| ||||| |||||||||||| | |||||||            |||||  | |||||| ||||||| ||||    
T  52983836 catcagattttcaaccttcacgtttttgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagccctat 52983935  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    || ||||||| |||| |||| |||||||||||||||||||| | ||||| ||||||||||||||| || |||||||||||| ||||||| ||||| ||||    
T  52983936 cataatctacagaaatattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataatctcttatttgcaaaaacgtttagactccgacttttc 52984035  T
Q  190 aa 191  Q
    ||    
T  52984036 aa 52984037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 51324178 - 51324343
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||| ||||  ||| ||| ||||||| ||||| |||   ||||| |||||||||||||    
T  51324178 cgttttcgcctacatgctcctgacacttggctctatcataatctacagaaat-ttcaagtctcaaccatcccaagaatcattttcccaaacctcacataa 51324276  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaa 219  Q
    || || |||||||||||| ||||||||||||| ||| || ||||||||| |||||||||||| ||||    
T  51324277 tcccttatttgcaaaaacgtttagacaccgacttttgaagcgaaaatcccaattttcatcaacccaa 51324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 220
Target Start/End: Complemental strand, 21239424 - 21239257
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaa-aattggtttccaaaacctcacata 151  Q
    ||||||| |||||| |||||||||||||| ||||||||| ||||||| |||   ||| ||| ||||||| || || |||   ||||  ||||||||||||    
T  21239424 ccgtttttgcctacacgctcctgacacttggctctatcataatctacagaatt-ttcaagtctcaaccatccgaagaatcattttctcaaacctcacata 21239326  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
    ||| || |||||||||| | ||| ||||||||| |||||| ||||||||| |||||||||||| |||||    
T  21239325 atcccttatttgcaaaatcgttttgacaccgacttttcaagcgaaaatcccaattttcatcaacccaaa 21239257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 39061018 - 39061118
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcc-agtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||  | ||||||| ||| ||||||| ||||| ||||  ||||||||||||||||||    
T  39061018 cgttttcgcctacacgctcctgacacttaactctatcataatctac--agaaattccaagtctcaaccatcccaagaattattttccaaaacctcacata 39061115  T
Q  152 atc 154  Q
    |||    
T  39061116 atc 39061118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 20031020 - 20030862
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttcca-aaacctcacat 150  Q
    |||||||||||||| |||||||||||||| ||||||||  ||||||| | ||  ||| ||| ||||||| |||||| ||   |||||  |||||||||||    
T  20031020 ccgttttcgcctacacgctcctgacacttggctctatcttaatctacagcaat-ttcaagtctcaaccatcccaaagatcattttccccaaacctcacat 20030922  T
Q  151 aatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcat 211  Q
    | || || |||||||||| | ||||||||||||| ||||||  |||||||| |||||||||    
T  20030921 agtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcat 20030862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 27330558 - 27330502
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| ||||||||||||||||| ||||| |||||| ||||| |||||||||    
T  27330558 cagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatccgttttcg 27330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 7791936 - 7791778
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggttt-ccaaaacctcacat 150  Q
    |||||||||||||| |||||||||||||| ||||||||  ||||||| |  || ||| ||| ||||||| |||||  ||   ||| || |||||||||||    
T  7791936 ccgttttcgcctacacgctcctgacacttggctctatcttaatctacag-caatttcaagtctcaaccatcccaaggatcattttccccaaacctcacat 7791838  T
Q  151 aatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcat 211  Q
    | || || |||||| ||||| ||||||||||||| ||||||  |||| ||| |||||||||    
T  7791837 agtctcttatttgc-aaaacgtttagacaccgacttttcaagggaaagtcccaattttcat 7791778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 35054221 - 35054277
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| ||| || |||||||||| ||||| |||||||||||| |||||||||    
T  35054221 cagattttcaacctccaagttttcgcgcataaaaatcaaaccgttaatccgttttcg 35054277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 20825568 - 20825509
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  20825568 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 20825509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 17148231 - 17148330
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||||    
T  17148231 gttttcgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataa 17148328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 51476601 - 51476650
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaa 51  Q
    ||||||||||||| || |||||||||||| | ||||| ||||||||||||    
T  51476601 catcagattttcaaccctcacgttttcgctcataaaaatcaaaccgttaa 51476650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 815 - 979
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  815 cgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaatcgatttccagaacctcacataat 914  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
    | || ||||||  |||||||||||||||||  |||||| ||||||||| |||||||| ||| |||||    
T  915 cacttatttgc--aaacatttagacaccgagttttcaagcgaaaatcccaattttcaccaacccaaa 979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 880 - 662
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||            ||||  ||||||||||||||||||||||||    
T  880 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatca 781  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     ||||||  ||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||| |||||| ||||| |||||||||||||  |||||    
T  780 taatctatagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaatctcacataatcgcttatttgc-aaaacgtttagacaccgactcttcaa 682  T
Q  192 tcgaaaatccaaattttcat 211  Q
      |||||||| |||||||||    
T  681 gggaaaatcccaattttcat 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 19402 - 19560
Alignment:
Q  76 acacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacattta 175  Q
    |||||||||||||||| ||||||| |||||||||  ||||||||||||||||||| |||||||| ||||| || ||||| || |||||||||||| ||||    
T  19402 acacttagctctatcataatctacagaaaaattcatgtttcaaccacccaaaaatcggtttccataaccttacgtaatcacttatttgcaaaaacgttta 19501  T
Q  176 gacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||||| ||| |||||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  19502 gacactgacttttcaagcgaaaatcccaattttcatcaagccaaacccaaaaactgatt 19560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 11132 - 11243
Alignment:
Q  123 ccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaact 222  Q
    |||||||| |||| ||| ||| |||||||||| || |||| ||||||| ||||||||| ||| |||||| ||||||||| |||||||||||| ||||||     
T  11132 ccaaaaatcggttcccagaacgtcacataatcacttattttcaaaaacgtttagacactgacttttcaagcgaaaatcccaattttcatcaacccaaacc 11231  T
Q  223 caaaaactgatt 234  Q
    | | ||||||||    
T  11232 ccataactgatt 11243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 5012 - 5123
Alignment:
Q  123 ccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaact 222  Q
    |||||||| |||| ||| ||| |||||||||| || |||| ||||||| ||||||||||||| |||||   |||||||  |||||||||||| ||||||     
T  5012 ccaaaaatcggttcccagaacgtcacataatcacttattttcaaaaacgtttagacaccgacttttcatgtgaaaatctcaattttcatcaacccaaacc 5111  T
Q  223 caaaaactgatt 234  Q
    | | ||||||||    
T  5112 ccataactgatt 5123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 7352 - 7533
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  7352 ccgttttcgcctacacgctcttgacacttagatctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttcccaaacctcacataa 7451  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||||||||| ||||||| ||||| |||||| || |||| | ||||| |||| | |||||| | ||||||||||    
T  7452 tctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattccaatttccatcgacccaaaccctaaaactgatt 7533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 90; Significance: 1e-43; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 113347 - 113166
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||| |||||  | |||| ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||| | |||||| ||| ||||||||    
T  113347 ccgttttcacctacatgttcctcacacttagccctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacatcacataa 113248  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| |  |||||||||    
T  113247 tcacttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaaaccccgaaactgatt 113166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 118180 - 118013
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||| |||||  | |||| ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  118180 cgttttcacctacatgttcctcacacttagccctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataat 118081  T
Q  154 cgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaac 221  Q
    | || |||||||||||| ||||||||||||   ||||| ||||||||  |||||||||||| ||||||    
T  118080 cacttatttgcaaaaacgtttagacaccgagtcttcaagcgaaaatctcaattttcatcaacccaaac 118013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 25505 - 25450
Alignment:
Q  6 agattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  25505 agattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 25450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 118244 - 118195
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaa 51  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||| ||||||||    
T  118244 catcagattttcaaccttcacattttcgcgcataaaaatcataccgttaa 118195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 25959 - 25758
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    |||||||||| || ||||||||||||||||| |||||  |||||||||||||||||||||            ||||| ||||||||||||||||||||||    
T  25959 catcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctat 25860  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
    || ||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||||| || |||||||||||| |||||||  |||| ||||    
T  25859 cataatctacagaaaaattcaagtttcaaccaccaaaaaatcgatttccaaaacctcacataatctcttatttgcaaaaacgtttagacttcgacttttc 25760  T
Q  190 aa 191  Q
    ||    
T  25759 aa 25758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 801 - 1045
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg-----------cctacgcgctcctgacacttagctctatc 90  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| ||||| | |||||||           |||||  |||||||||||||||| |||||    
T  801 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgccttttcacctacatgctcctgacacttagccctatc 900  T
Q  91 acaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttca 190  Q
    | ||||||| |||| |||| |||||||||||||||||||| | ||||| ||||||||||||||| || |||||||||||| ||||||||||||| |||||    
T  901 ataatctacagaaagattcaagtttcaaccacccaaaaatcgatttcc-aaacctcacataatctcttatttgcaaaaacgtttagacaccgacttttca 999  T
Q  191 atcgaaaatccaaattttcatcaatccaaactcaaaaactgattag 236  Q
    |  |||||||| ||||| |||| | |||||| | |||| |||||||    
T  1000 agtgaaaatcccaatttccatcgacccaaaccccaaaattgattag 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 4397 - 4534
Alignment:
Q  73 ctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacat 172  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |    
T  4397 ctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcgcttatttgc-aaaacgt 4495  T
Q  173 ttagacaccgacctttcaatcgaaaatccaaattttcat 211  Q
    |||||||||||| ||||||  |||||||| |||||||||    
T  4496 ttagacaccgacttttcaagggaaaatcccaattttcat 4534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 4319 - 4375
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttc 60  Q
    ||||||||||| ||||||||||||||| | ||||| |||||| ||||||||||||||    
T  4319 tcagattttcaaccttcacgttttcgcacataaaaatcaaactgttaacccgttttc 4375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 9e-42; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 22703649 - 22703830
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||    
T  22703649 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataa 22703748  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcg-aaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||||| ||||| |||||||||| |  |||||| || ||||||| ||||| |||||| |||||| | || |||||||    
T  22703749 tcacttatttgc-aaaacgtttagacaccaatttttcaaacgaaaaatcccaatttccatcaacccaaaccccaatactgatt 22703830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 201
Target Start/End: Complemental strand, 24087946 - 24087799
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||||||   |||||||||||||||||||    
T  24087946 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaacattcaagtttcaactacccaaaaatctatttccaaaacctcacataa 24087847  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatcc 201  Q
    || || |||||| ||||| ||||||||||||| |||||| |||||||||    
T  24087846 tcacttatttgc-aaaacgtttagacaccgacttttcaagcgaaaatcc 24087799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 6477610 - 6477458
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||  |||||  |||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  6477610 ccgttttcgcctacacgctcctgacacttagccttatcattatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataa 6477511  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattt 207  Q
    ||||| ||||||  |||| ||||||||||||| ||||||  |||||||| |||||    
T  6477510 tcgcttatttgc--aaacgtttagacaccgacttttcaagggaaaatcccaattt 6477458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 24383299 - 24383442
Alignment:
Q  25 tttcgcgcctaaaactcaaaccgttaacccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc 124  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||| || |||||| ||||||||| | ||    
T  24383299 tttcgcgcgtaaaattcaaaccgttaacccgttttcgcctacacgctcctaacacttagctctatcatattctacagagaaattcaagtttcaactatcc 24383398  T
Q  125 aaaaattggtttccaaaacctcacataatcgctcatttgcaaaa 168  Q
     |||||   |||||| |||||||||||||| || ||||||||||    
T  24383399 caaaataattttccagaacctcacataatcacttatttgcaaaa 24383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 43707419 - 43707253
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||| |||| ||||||||| ||||||||  ||||||| | ||| ||| ||| ||||||| ||||| |||   ||||| |||||||||||||    
T  43707419 cgttttcgcctacacgcttctgacacttggctctatcttaatctacagcaaa-ttcaagtctcaaccatcccaagaatcattttcccaaacctcacataa 43707321  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaa 220  Q
    || || |||||||||||| |||||||||||||||||||| ||||||||| ||||||||| || |||||    
T  43707320 tcacttatttgcaaaaacgtttagacaccgacctttcaagcgaaaatcccaattttcatgaacccaaa 43707253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 19358577 - 19358740
Alignment:
Q  71 tcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaa----ttggtttccaaaacctcacataatcgctcatttgcaa 166  Q
    |||||||||||| |||||||| ||| ||| ||||||||| |||||||||||||||||||    | | |||||||| |||||||||||| || ||||||||    
T  19358577 tcctgacacttaactctatcataatatacagaaaaattcaagtttcaaccacccaaaaaaaaatcgatttccaaa-cctcacataatcccttatttgcaa 19358675  T
Q  167 aaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactg 231  Q
    |||| |||||||||| || |||||| ||||||||  ||||||||| || |||||| | |||||||    
T  19358676 aaacgtttagacaccaacgtttcaagcgaaaatctcaattttcattaacccaaaccccaaaactg 19358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 34877501 - 34877602
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||| || |||||||||||||||||||||||| | ||||| || |||||| ||||||||||| || ||||  | |||||||||||||||||||    
T  34877501 ccgttttcgccaacacgctcctgacacttagctctatcatattctacagagaaattcaagtttcaaccatcccaaaacagatttccaaaacctcacataa 34877600  T
Q  153 tc 154  Q
    ||    
T  34877601 tc 34877602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 45617985 - 45617869
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||  |||||| | || || ||||||  ||||||||| ||||||| |||||| ||||| | |||||| ||||||||||||    
T  45617985 ccgttttcgcctacacgctcctggaacttagatataccataatctattgaaaaattcaagtttcacccaccctaaaatcgatttccagaacctcacataa 45617886  T
Q  153 tcgctcatttgcaaaaa 169  Q
    ||||| |||||||||||    
T  45617885 tcgcttatttgcaaaaa 45617869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 16935096 - 16935147
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaa 104  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  16935096 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 16935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 17005756 - 17005807
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaa 104  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  17005756 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 17005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 21245357 - 21245495
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||  |  |  ||| | | |||||||||| |||||| | ||||| ||||||||||||    
T  21245357 ccgttttcgcctacactctcctgacacttggctctatcataatctatagctat-ttcaattctcaaccaccccaaaaatcgatttcccaaacctcacata 21245455  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    ||| ||  ||||||||||| ||||||| ||||| ||||||    
T  21245456 atctcttgtttgcaaaaacgtttagactccgacttttcaa 21245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 20273282 - 20273334
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaat 107  Q
    |||||||||||||||||||||||||||| |||||||| || |||| |||||||    
T  20273282 gttttcgcctacgcgctcctgacacttaactctatcataacctacagaaaaat 20273334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 22775768 - 22775667
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||| |||||  | |||||||  | |||||||| |||||||||| |||||||||   ||||| |||||||||||    
T  22775768 ccgttttcgcctacacgctcctgacacttaactctaagataatctac--agaaattccatgtttcaaccatcccaaaaatcattttccgaaacctcacat 22775671  T
Q  151 aatc 154  Q
    ||||    
T  22775670 aatc 22775667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 22781146 - 22781045
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||| |||||  | |||||||  | |||||||| |||||||||| |||||||||   ||||| |||||||||||    
T  22781146 ccgttttcgcctacacgctcctgacacttaactctaagataatctac--agaaattccatgtttcaaccatcccaaaaatcattttccgaaacctcacat 22781049  T
Q  151 aatc 154  Q
    ||||    
T  22781048 aatc 22781045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 28349840 - 28349955
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| |||||||  |  | ||| ||| ||||||| |||||||||   ||||| ||||||||||||    
T  28349840 ccgttttcgcctacactctcctgacacttggctctatcataatctac-aactatttcaagtctcaaccatcccaaaaatcattttcccaaacctcacata 28349938  T
Q  152 atcgctcatttgcaaaa 168  Q
    ||| || ||||||||||    
T  28349939 atctcttatttgcaaaa 28349955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 19659485 - 19659544
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||||||| | |||||||    
T  19659485 catcagattttcaaacttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcg 19659544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 24273410 - 24273272
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc-aaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | || ||||||||| ||||||||| ||||||| |  |  ||| ||| |||| ||||| |||||| | || || ||||||||||||    
T  24273410 ccgttttcgcctacactcttctgacacttggctctatcataatctacagctat-ttcaagtctcaaacaccccaaaaatcgattccccaaacctcacata 24273312  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    ||| ||  ||||||||||| ||||||| ||||| ||||||    
T  24273311 atctcttgtttgcaaaaacgtttagactccgacttttcaa 24273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27366989 - 27366930
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  | |||||||||||||||||||    
T  27366989 catcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcg 27366930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 36891490 - 36891434
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| |||  |||||||||||| |||||||||||||||||| || ||||||    
T  36891490 cagattttcaacctctacgttttcgcgcataaaactcaaaccgttaatccattttcg 36891434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 9653686 - 9653643
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||    
T  9653686 ttcacgttttcgcgcgtaaaaatcaaaccgttaatccgttttcg 9653643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 19358496 - 19358555
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| || |||||||||||| | ||||| |||||||||||| | |||||||    
T  19358496 catcagattttcaaccatcacgttttcgctcataaaaatcaaaccgttaatctgttttcg 19358555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 237
Target Start/End: Original strand, 26904080 - 26904261
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | | |||||||||| ||||||||| || |||| |  |  ||| ||| ||||||| ||||||||||  ||||| ||||||||||||    
T  26904080 ccgttttcgcctacactc-cctgacacttggctctatcataacctacagctat-ttcaagtctcaaccatcccaaaaattattttcccaaacctcacata 26904177  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaa-tccaaattttcatcaatccaaactcaaaaactgattagg 237  Q
    ||| || |||||| ||||| |||| ||  |||| |||||| |||||| |||||  || |||||| |||||| | |||||||||||||    
T  26904178 atctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaa--ttccatcaacccaaaccccaaaactgattagg 26904261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 27366926 - 27366851
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaa 128  Q
    |||||||||||||| ||||| ||| || ||||||||||| ||||||| |||||| |  ||||||||| ||| ||||    
T  27366926 ccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaaactaaagtttcaactaccaaaaa 27366851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 21274802 - 21274736
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    ||||||||||||||  |||||| ||||||||| ||||||||||  || |||||||  ||||||||||    
T  21274802 ccgttttcgcctacatgctcctaacacttagcactatcacaatgcacagaaaaatctcagtttcaac 21274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 42178601 - 42178560
Alignment:
Q  20 cacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||||| |||||||||||| |||||||||    
T  42178601 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 42178560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 3799242 - 3799202
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  3799242 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 3799202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 12636463 - 12636362
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||| |||||||  |||||| |||||| || |||||| |||||||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  12636463 ccgtttccgcctacatgctcctaacacttggcactatcataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 12636366  T
Q  151 aatc 154  Q
    ||||    
T  12636365 aatc 12636362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 12642237 - 12642136
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    ||||||||||||||  |||||| |||||| || |||||| ||| |||  ||||||| || |||||||||| ||||||| |   |||||||||||||||||    
T  12642237 ccgttttcgcctacatgctcctaacacttggcactatcataatttac--aaaaatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacat 12642140  T
Q  151 aatc 154  Q
    ||||    
T  12642139 aatc 12642136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 12642281 - 12642241
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  12642281 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 12642241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 34824106 - 34824207
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||  ||||| || ||||||   ||||||| || |||||||||| ||||||| |   |||||||||||| ||||    
T  34824106 ccgttttcgcctacacgctcctgacacttgactctaacataatcta--taaaaatttcatgtttcaaccatcccaaaagtcattttccaaaaccttacat 34824203  T
Q  151 aatc 154  Q
    ||||    
T  34824204 aatc 34824207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 18463 - 18678
Alignment:
Q  7 gattttcacccttcacgttttcgcgcctaaaactcaaaccgttaaccc------------gttttcgcctacgcgctcctgacacttagctctatcacaa 94  Q
    |||||||| ||||||||||||||| | ||||| |||||||||||||||            |||||||||||  | |||||||||||| ||||||||| ||    
T  18463 gattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacactcctgacacttggctctatcataa 18562  T
Q  95 tctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaatcg 194  Q
    ||||| ||||||||| |||||||||||||||||||| | | |||||||||||||| |||| || |||||| ||||| || |||||||||| |||||| ||    
T  18563 tctacagaaaaattcaagtttcaaccacccaaaaatcgatctccaaaacctcacacaatcacttatttgc-aaaacgttcagacaccgacttttcaagcg 18661  T
Q  195 aaaatccaaattttcat 211  Q
    ||||||| |||||||||    
T  18662 aaaatcccaattttcat 18678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 3566 - 3724
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | | |  ||||||||||| ||    
T  3566 ccgttttcgcctaaacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgttgtataaaacctcacacaa 3665  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||| ||||    
T  3666 tcacttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttacatc 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 3505 - 3555
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaaccc 54  Q
    ||||||||| | ||||||||||||||| | ||||| |||||||||||||||    
T  3505 tcagattttaaaccttcacgttttcgcacataaaaatcaaaccgttaaccc 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 16540 - 16319
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaa------------cccgttttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||||| |||||  |||||||||||             |||||||||||||| ||||||||||||||||||||||||    
T  16540 tcagattttcaaccttcacgttttcgcgcataaaaaccaaaccgttaatccgttttcgataccgttttcgcctacacgctcctgacacttagctctatca 16441  T
Q  92 caatctacggaaaaattccagtttcaaccaccc--aaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttc 189  Q
     ||||||| ||||||||| |||||||||||| |  |||||| | ||| | ||||||||||||||| || |||||| ||||| ||||||||||||| ||||    
T  16440 taatctacagaaaaattcaagtttcaaccacacaaaaaaatcgattttccaaacctcacataatctcttatttgc-aaaacgtttagacaccgacttttc 16342  T
Q  190 aatcgaaaatccaaattttcatc 212  Q
    || ||||||||| ||||| ||||    
T  16341 aaacgaaaatcccaatttccatc 16319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 2375 - 2194
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||||  |||||| |||||||||||||||| ||||||  ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||    
T  2375 ccgttttcgcctacatgctccttacacttagctctatcataatctatagaaaaattcaagtttcaaccacctaaaaattgatttcccaaacctcacataa 2276  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    || || |||| ||||||| |||||||  |||| |||||| |  |||| | ||||| |||||| |||||| | ||||||||||    
T  2275 tctcttattttcaaaaacgtttagacttcgacttttcaagcataaattccaatttccatcaacccaaaccccaaaactgatt 2194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 2438 - 2379
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| || ||||||||||||| ||| |||||  |||||||||||||||||||||    
T  2438 catcagatttccaaccttcacgttttctcgcataaaaaccaaaccgttaacccgttttcg 2379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 147297 - 147412
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  147297 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaatcgatttccagaacctcacataa 147396  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  147397 tcacttatttgcaaaa 147412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 87737 - 87793
Alignment:
Q  5 cagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    |||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||||    
T  87737 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 87793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 212
Target Start/End: Complemental strand, 35918 - 35760
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||| | ||| || | ||||| ||||||||||| |    
T  35918 ccgttttcgcctacacgctcctgacacttatctctatcataatctacagaaatattcaagtttcaaccatctaaatatcgatttcccaaacctcacatta 35819  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    || || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||| ||||    
T  35818 tctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 35760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 35979 - 35922
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||| |  |||||||||||||| |||||  |||||||||||||||||||||    
T  35979 tcagattttcaacaatcacgttttcgcgcataaaaaccaaaccgttaacccgttttcg 35922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 6948 - 7109
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||  | || ||| ||| ||||||| ||||| |||   ||||| ||||||||||||    
T  6948 ccgttttcgcctacacgctcctgacacttagctctatcataatctaca-acaatttcaagtctcaaccatcccaagaatcattttcccaaacctcacata 7046  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || ||||| |||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  7047 atcccttatttggaaaaacgtttagacaccgacttttcaaacgaaaatcccaattttcatcaa 7109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 1707 - 1530
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg------------cctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||||            ||||| ||||||||| ||||||||||||    
T  1707 catcagattttcaaccttcacattttcgcgcataaaacccaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgagacttagctctat 1608  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaa 168  Q
    || ||||||| |||||| || ||||||||||| |||||||| | ||||| ||| ||||||| ||| || ||||||||||    
T  1607 cataatctaccgaaaaactcaagtttcaacca-ccaaaaatcgatttcccaaaactcacatgatctcttatttgcaaaa 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 952 - 729
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| |||||||||||||| || |||||  |||||||||||||||||            ||||||||| | ||||||||||||||||||||||    
T  952 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 853  T
Q  92 caatctacggaaaaattccagtttcaaccaccc---aaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgaccttt 188  Q
     ||||||| ||||||||  ||||||||||| ||   |||||| | ||||| ||||||||||| ||  || |||||||||||| ||||||||| ||| |||    
T  852 taatctacagaaaaattaaagtttcaaccatccaaaaaaaatcgatttcc-aaacctcacatgatatcttatttgcaaaaacgtttagacactgactttt 754  T
Q  189 caatcgaaaatccaaattttcatca 213  Q
    ||| ||||||||| |||||||||||    
T  753 caagcgaaaatcccaattttcatca 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 7702 - 7586
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| |||||||||||||| || |||||  |||||||||||||||||            ||||||||| | ||||||||||||||||||||||    
T  7702 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 7603  T
Q  92 caatctacggaaaaatt 108  Q
     ||||||| ||||||||    
T  7602 taatctacagaaaaatt 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 26414 - 26512
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||  | |||||| ||| ||||||| ||||| |||   || |||||||||||||||    
T  26414 ccgttttcgcctacacgctcctgacacttaactctatcataatctac--agaaattcaagtctcaaccatcccaagaatcatttcccaaaacctcacata 26511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 991 - 853
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||| ||||||||| ||||||||||| | ||||||   ||||| |||||||||||||    
T  991 ccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaactaaaaatctatttcccaaacctcacataa 892  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || ||  ||||||||||| ||||||| || || ||||||    
T  891 tctcttgtttgcaaaaacgtttagactccaacttttcaa 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 1040 - 995
Alignment:
Q  16 ccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||||  |||||  |||||||||||||||||||||    
T  1040 ccttcacgttttcgcgaataaaaaccaaaccgttaacccgttttcg 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 3789 - 3927
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||||||||  | |||||||||||||| |||||| ||||||| |||| |||| |||||||||||||| ||||| | ||||| |||||||||||||    
T  3789 ccgttttcgcctacatggtcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccccaaaatcgatttcccaaacctcacataa 3888  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || || |||||||||||| || |||| ||||| ||||||    
T  3889 tctcttatttgcaaaaacgttcagactccgacttttcaa 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 3726 - 3775
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaa 51  Q
    ||||||||||||| |||||| |||||||||| ||||| |||| |||||||    
T  3726 catcagattttcaaccttcatgttttcgcgcataaaaatcaatccgttaa 3775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 11133 - 10952
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| ||||  ||  ||| |||| || ||||| |||   ||||| ||||||||||||    
T  11133 ccgttttcgcctacactctcctgacacttggctctatcataatctacagaaatttta-agtatcaaacatcccaagaatcattttcccaaacctcacata 11035  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||| || |||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| | |||| |||||    
T  11034 atcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaaaccccaaaattgatt 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 234
Target Start/End: Complemental strand, 5415 - 5234
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||| | ||||||||| ||||||| ||||  ||| ||| |||| || ||||| |||   ||||| ||||||||||||    
T  5415 ccgttttcgcctacactctcctgacacatggctctatcataatctacagaaat-ttcaagtctcaaacatcccaagaatcattttcccaaacctcacata 5317  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgatt 234  Q
    ||| || ||||| |||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||| | |||| |||||    
T  5316 atcccttatttgtaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaaaccccaaaattgatt 5234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 3550 - 3711
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccaccc---aaaaattggtttccaaaacctcaca 149  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |  |||| |||| ||||||||| ||||   |||||| | ||||| ||||||||||    
T  3550 ccgttttcgcctacacgctcctgacacttagctctatcataatcaaaagaaatattcaagtttcaactacccaaaaaaaatcgatttcccaaacctcaca 3649  T
Q  150 taatcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatc 212  Q
    | ||| || |||||| ||||| ||||||||||||| |||||| ||||||||| ||||| ||||    
T  3650 tgatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 3711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 2223 - 2037
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||| | ||  ||| ||| ||||||| ||||| ||    ||||| ||||||||||||    
T  2223 ccgtcttcgcctacacgctcctgacacttggctctatcataatctacagcaat-ttcaagtctcaaccatcccaagaagaattttcccaaacctcacata 2125  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaaactgattaggaa 239  Q
    ||| || |||||||||||| ||||||||| ||| |||||| | ||||||| |||||||||||| | ||||  ||||||||||||||||    
T  2124 atcccttatttgcaaaaacgtttagacactgacttttcaagcaaaaatcccaattttcatcaacctaaacctaaaaactgattaggaa 2037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 190 - 94
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacat 150  Q
    |||||| |||||| ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||||| || | |||||| ||||||||||    
T  190 cgtttttgcctacacgctcctgacacttagctctaacataatctacagaaaaattcaagtttcaaccacccaaagatcgatttccagaacctcacat 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 170
Target Start/End: Original strand, 8428 - 8545
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||| | ||| |||  |||||||||| |||||||||   ||||||||||||||||||    
T  8428 ccgttttcgcctacgcgctcctgacacttaactctatcatagtctacag-aaatttcatgtttcaaccatcccaaaaatcattttccaaaacctcacata 8526  T
Q  152 atcgctcatttgcaaaaac 170  Q
    ||| || ||||||||||||    
T  8527 atcacttatttgcaaaaac 8545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 227
Target Start/End: Complemental strand, 764 - 590
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |  |  ||| ||| | ||||| ||||| |||   ||||| ||||||||||||    
T  764 ccgttttcgcctacactctcctgacacttggctctatcataatctacagctat-ttcaagtctgaaccatcccaagaatcattttcccaaacctcacata 666  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaatccaaactcaaaa 227  Q
    ||| || |||||||||||| ||||||||||||| |||||| ||||||||  ||| ||||||||  ||||| |||||    
T  665 atcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaactcaaacccaaaa 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 35163 - 35324
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| ||| |||||||||| ||||||||| ||||||  ||||  ||| ||| ||||||| ||||| |||   ||| | ||||||||||||    
T  35163 ccgttttcgcctacacgcccctgacacttggctctatcataatctatagaaat-ttcaagtctcaaccatcccaagaatcatttttcgaaacctcacata 35261  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttcatcaa 214  Q
    ||| || |||||||||||| |||||||||| || || ||| ||||||||| ||||| ||||||    
T  35262 atcccttatttgcaaaaacgtttagacaccaactttacaagcgaaaatcccaatttacatcaa 35324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 17686 - 17479
Alignment:
Q  4 tcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgtt------------ttcgcctacgcgctcctgacacttagctctatca 91  Q
    ||||||||||| ||||||||||||||  | ||||| ||||||||||||||||||            ||||||||| ||||||| ||| ||||| ||||||    
T  17686 tcagattttcaaccttcacgttttcgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctaaca-ttagccctatca 17588  T
Q  92 caatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
     |||||||  ||| |||| |||||||||||||||| ||| | ||||| ||||||||||||||| || |||| | ||||| ||| |||||| ||  |||||    
T  17587 taatctacaaaaagattcaagtttcaaccacccaataatcgatttcccaaacctcacataatctcttattt-ccaaaacgttttgacaccaactattcaa 17489  T
Q  192 tcgaaaatcc 201  Q
     |||||||||    
T  17488 acgaaaatcc 17479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 8749 - 8926
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcgc------------ctacgcgctcctgacacttagctctat 89  Q
    ||||||||||||  ||||||||||||||||| |||||  |||||||||||||||||||||             |||| ||||||||| || |||||||||    
T  8749 catcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacacgctcctgagacatagctctat 8848  T
Q  90 cacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataatcgctcatttgcaaaa 168  Q
    || ||||||| |||||| || ||||||||| | |||||||| | ||||| ||| ||||||| ||| || ||||||||||    
T  8849 cataatctactgaaaaactcaagtttcaacta-ccaaaaatcgatttcccaaaactcacatgatctcttatttgcaaaa 8926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 6597 - 6656
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  ||||||||||||||||| |||||  |||||||||||||||||||||    
T  6597 catcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcg 6656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 753 - 687
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||| ||||||||| |||||||||    
T  753 ccgttttcgcctacacgctcctgacacttagctctatcttaatgtacagaaaaattcaagtttcaac 687  T

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Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 22146 - 22048
Alignment:
Q  21 acgttttcgcgcctaaaactcaaaccgttaacccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||  |||||| ||| || || |||||| |||  || ||||||| |||||||||||    
T  22146 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgcctacatgctcctaacatttggcactatcataatgcacagaaaaatcccagtttcaac 22048  T

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Target: scaffold0251; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 14204 - 14145
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| | |  |||||||||||| ||||| |||||||||||| |||||||||    
T  14204 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 14145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 14141 - 14075
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    ||||||||||||||  |||||| ||||||||| |||||| |||  || ||||||| |||||||||||    
T  14141 ccgttttcgcctacatgctcctaacacttagcactatcataatgcacagaaaaatcccagtttcaac 14075  T

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Target: scaffold0490 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 5557 - 5671
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    ||||||||| ||||  |||||||| || ||||||||||| ||||||| |||||| || ||||||||| | |||||||| | ||||| ||| ||||||| |    
T  5557 ccgttttcgtctacatgctcctgagacatagctctatcataatctaccgaaaaactcaagtttcaacta-ccaaaaatcgatttcccaaaactcacatga 5655  T
Q  153 tcgctcatttgcaaaa 168  Q
    || || ||||||||||    
T  5656 tctcttatttgcaaaa 5671  T

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Target: scaffold0269 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 16118 - 16254
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||  |||||||||| |||||||||| ||||||| |   ||||||||||||||||||    
T  16118 cgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaattccatgtttcaaccatcccaaaagtcattttccaaaacctcacata 16215  T
Q  152 atcgctcatttgcaaaaacatttagacaccgacctttca 190  Q
    | | || ||| || |||||| ||| ||| |||| |||||    
T  16216 aacacttattggcgaaaacacttaaacatcgacatttca 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 76798 - 76857
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||| | |||||||    
T  76798 catcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcg 76857  T

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Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 146100 - 146166
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  146100 ccgttttcgcctacacgctcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 146166  T

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Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaa 43  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  42 catcagattttcacccttcacgttttcgcgcctaaaaatcaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 21657 - 21812
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttcca-aaacctcacataa 152  Q
    ||||||||||| | |||||||||||||| ||||||||  |||||||  | || ||| ||| ||||||| || || | |  |||||  |||||||||||||    
T  21657 cgttttcgcctccacgctcctgacacttggctctatcttaatctaca-acaatttcaagtatcaaccatccgaagaataatttccccaaacctcacataa 21755  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaatcgaaaatccaaattttc 209  Q
    || || |||||||| ||| ||||||||||| | |||| | ||||||||| |||||||    
T  21756 tcccttatttgcaagaacgtttagacaccgtcttttcgagcgaaaatcccaattttc 21812  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 51881 - 51996
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||  |   | ||| ||| ||||||| ||||||||||  ||||| ||||||||||||    
T  51881 ccgttttcgcctacactctcctgacacttggctctatcataatctaaag-ctatttcaagtctcaaccatcccaaaaattattttcccaaacctcacata 51979  T
Q  152 atcgctcatttgcaaaa 168  Q
    ||| || ||||||||||    
T  51980 atctcttatttgcaaaa 51996  T

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Target: scaffold0447 (Bit Score: 35; Significance: 0.00000000009; HSPs: 6)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 4068 - 4134
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| ||||| ||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  4068 ccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 7526 - 7663
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |   | ||| ||| ||| |||  | ||||| | ||| | |||||||||||||    
T  7526 ccgttttcgcctacactctcctgacacttggctctatcataatctacag-ctatttcaagtctcacccattccaaaatcgatttaccaaacctcacataa 7624  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || ||  ||||||||||| ||||||| ||||| ||||||    
T  7625 tctcttgtttgcaaaaacgtttagactccgacttttcaa 7663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 8682 - 8748
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| ||||| ||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  8682 ccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 8748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 12140 - 12277
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |   | ||| ||| ||| |||  | ||||| | ||| | |||||||||||||    
T  12140 ccgttttcgcctacactctcctgacacttggctctatcataatctacag-ctatttcaagtctcacccattccaaaatcgatttaccaaacctcacataa 12238  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || ||  ||||||||||| ||||||| ||||| ||||||    
T  12239 tctcttgtttgcaaaaacgtttagactccgacttttcaa 12277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 4021 - 4064
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  4021 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcg 4064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8635 - 8678
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  8635 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcg 8678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 6676 - 6742
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaac 119  Q
    |||||||||||||| ||||| ||||||||||| |||||  ||| ||| ||||||||| |||||||||    
T  6676 ccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 10135 - 10272
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaaccacccaaaaattggtttccaaaacctcacataa 152  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||||| |   | ||| ||| ||| |||  | ||||| | ||| | |||||||||||||    
T  10135 ccgttttcgcctacactctcctgacacttggctctatcataatctacag-ctatttcaagtctcacccattccaaaatcgatttaccaaacctcacataa 10233  T
Q  153 tcgctcatttgcaaaaacatttagacaccgacctttcaa 191  Q
    || ||  ||||||||||| ||||||| ||||| ||||||    
T  10234 tctcttgtttgcaaaaacgtttagactccgacttttcaa 10272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 6629 - 6672
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  6629 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcg 6672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 19656 - 19557
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||||||||||  ||||| || |||||||  |||||||||| |||||||||| ||||||| |   ||||||||| |||||||    
T  19656 ccgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaattccacgtttcaaccatcccaaaagtcattttccaaaatctcacat 19559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 2125 - 2026
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataat 153  Q
    |||||||||||| ||||||||||||||  ||||| || ||||||| | ||| |||  |||||||||| | |||||||   ||||||||||||||||||||    
T  2125 gttttcgcctacacgctcctgacacttgactctaacataatctacag-aaatttcatgtttcaaccatctcaaaaataattttccaaaacctcacataat 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 9270 - 9171
Alignment:
Q  55 gttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca-cccaaaaattggtttccaaaacctcacataat 153  Q
    |||||||||||| ||||||||||||||  ||||| || ||||||| | ||| |||  |||||||||| | |||||||   ||||||||||||||||||||    
T  9270 gttttcgcctacacgctcctgacacttgactctaacataatctacag-aaatttcatgtttcaaccatctcaaaaataattttccaaaacctcacataat 9172  T

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Target: scaffold0597 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 1779 - 1736
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||    
T  1779 ttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 6819 - 6760
Alignment:
Q  2 catcagattttcacccttcacgttttcgcgcctaaaactcaaaccgttaacccgttttcg 61  Q
    ||||||||||||  |||||| |||||||||| ||||| |||||||||||| | |||||||    
T  6819 catcagattttctaccttcatgttttcgcgcataaaaatcaaaccgttaatctgttttcg 6760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 5395 - 5437
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgttttc 60  Q
    ||||||||||||||| |||||  ||||||||||||||||||||    
T  5395 ttcacgttttcgcgcataaaaaccaaaccgttaacccgttttc 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 28222 - 28268
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctac 99  Q
    ||||||||||||||  |||||||||||||| |||||||| |||||||    
T  28222 ccgttttcgcctacatgctcctgacacttaactctatcataatctac 28268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 79361 - 79460
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacc-acccaaaaattggtttccaaaacctcacat 150  Q
    |||||||||||||| ||||||| ||||||  ||||| || |||||||  ||||||| || ||||||||| |||||||| |   |||||||||||||||||    
T  79361 ccgttttcgcctacacgctcctaacacttgactctaacataatctac--aaaaatttcatgtttcaaccaacccaaaagtcattttccaaaacctcacat 79458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 40184 - 40282
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||| |||||||||||||    
T  40184 cgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttcaaaaacctcacata 40281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 45667 - 45765
Alignment:
Q  54 cgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacata 151  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |   |||| |||||||||||||    
T  45667 cgttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaatttcatgtttcaaccatcccaaaagtcattttcaaaaacctcacata 45764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 33168 - 33266
Alignment:
Q  56 ttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattcca-gtttcaacca-cccaaaaattggtttccaaaacctcacataat 153  Q
    ||||||||||| ||||||||||||||  ||||| || |||||||  ||||||| || |||||||||| ||||||| |    |||||||||||||||||||    
T  33168 ttttcgcctacacgctcctgacacttgactctaacataatctac--aaaaattacatgtttcaaccatcccaaaagtcatcttccaaaacctcacataat 33265  T

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Target: scaffold0077 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 14777 - 14818
Alignment:
Q  18 ttcacgttttcgcgcctaaaactcaaaccgttaacccgtttt 59  Q
    ||||||||||||||| |||||  |||||||||||||||||||    
T  14777 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttt 14818  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 166841 - 166773
Alignment:
Q  53 ccgttttcgcctacgcgctcctgacacttagctctatcacaatctacggaaaaattccagtttcaacca 121  Q
    |||||||||||||| ||||||||||||||  ||||| || |||||||  |||| |||  ||||||||||    
T  166841 ccgttttcgcctacacgctcctgacacttgactctaacataatctacaaaaaatttcatgtttcaacca 166773  T

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