View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0689_low_13 (Length: 368)

Name: NF0689_low_13
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0689_low_13
NF0689_low_13
[»] scaffold0034 (1 HSPs)
scaffold0034 (5-347)||(105471-105813)
[»] chr8 (21 HSPs)
chr8 (5-347)||(8299973-8300315)
chr8 (5-347)||(7924556-7924898)
chr8 (5-337)||(41664996-41665329)
chr8 (5-347)||(32266732-32267074)
chr8 (5-333)||(9922785-9923113)
chr8 (56-337)||(13396568-13396849)
chr8 (160-347)||(172273-172460)
chr8 (5-306)||(13879115-13879416)
chr8 (5-306)||(25090598-25090899)
chr8 (5-108)||(17699889-17699992)
chr8 (5-108)||(20824708-20824811)
chr8 (5-54)||(172667-172716)
chr8 (235-279)||(12134566-12134610)
chr8 (5-108)||(43270861-43270964)
chr8 (5-108)||(42177180-42177280)
chr8 (220-273)||(15439412-15439465)
chr8 (220-273)||(15530716-15530769)
chr8 (234-274)||(25193332-25193372)
chr8 (236-279)||(4987924-4987967)
chr8 (239-286)||(13200296-13200343)
chr8 (259-308)||(42177471-42177520)
[»] chr7 (27 HSPs)
chr7 (5-347)||(4937756-4938098)
chr7 (5-347)||(11276876-11277222)
chr7 (5-337)||(47877163-47877495)
chr7 (5-347)||(29968144-29968486)
chr7 (5-333)||(17720819-17721147)
chr7 (5-333)||(235066-235393)
chr7 (131-336)||(37919725-37919930)
chr7 (5-108)||(31423011-31423114)
chr7 (233-305)||(37254970-37255042)
chr7 (5-105)||(37255170-37255270)
chr7 (223-274)||(17055772-17055823)
chr7 (209-276)||(34231940-34232007)
chr7 (236-303)||(36363738-36363805)
chr7 (224-274)||(22819564-22819614)
chr7 (236-274)||(28173835-28173873)
chr7 (239-308)||(25619674-25619743)
chr7 (234-274)||(11338990-11339030)
chr7 (236-272)||(27941353-27941389)
chr7 (239-307)||(31422814-31422882)
chr7 (236-275)||(25924312-25924351)
chr7 (244-279)||(45943089-45943124)
chr7 (236-279)||(45992814-45992857)
chr7 (236-274)||(8722982-8723020)
chr7 (209-279)||(41339763-41339833)
chr7 (223-279)||(27218966-27219022)
chr7 (241-273)||(34103723-34103755)
chr7 (236-272)||(44433642-44433678)
[»] chr4 (29 HSPs)
chr4 (5-347)||(23642219-23642561)
chr4 (5-337)||(47418984-47419316)
chr4 (7-344)||(15740394-15740730)
chr4 (5-337)||(19755447-19755779)
chr4 (5-337)||(19784027-19784359)
chr4 (5-344)||(1828168-1828507)
chr4 (168-347)||(47685686-47685865)
chr4 (5-306)||(54482787-54483088)
chr4 (5-305)||(48312307-48312606)
chr4 (5-333)||(2821662-2821993)
chr4 (5-156)||(5789720-5789871)
chr4 (5-67)||(23647877-23647939)
chr4 (4-108)||(55725333-55725437)
chr4 (7-147)||(46146046-46146187)
chr4 (5-117)||(19735363-19735475)
chr4 (236-279)||(29553599-29553642)
chr4 (236-279)||(49926125-49926168)
chr4 (236-274)||(23657638-23657676)
chr4 (224-274)||(46543222-46543272)
chr4 (5-114)||(11586826-11586935)
chr4 (236-279)||(19647947-19647990)
chr4 (236-306)||(5789951-5790021)
chr4 (239-277)||(8935315-8935353)
chr4 (261-303)||(11587082-11587124)
chr4 (234-279)||(20395834-20395879)
chr4 (237-274)||(28713178-28713215)
chr4 (199-272)||(35324187-35324260)
chr4 (234-274)||(4640536-4640576)
chr4 (239-279)||(48497914-48497954)
[»] chr3 (27 HSPs)
chr3 (5-347)||(2364447-2364789)
chr3 (5-337)||(10323199-10323531)
chr3 (5-347)||(19919857-19920199)
chr3 (5-337)||(34332443-34332775)
chr3 (181-347)||(7312946-7313112)
chr3 (213-331)||(7032492-7032610)
chr3 (83-333)||(40930245-40930484)
chr3 (5-306)||(48569667-48569968)
chr3 (5-117)||(17097505-17097617)
chr3 (5-117)||(15312981-15313094)
chr3 (5-118)||(16179346-16179459)
chr3 (5-108)||(12341883-12341986)
chr3 (5-303)||(3141066-3141363)
chr3 (8-303)||(962794-963089)
chr3 (223-272)||(31547616-31547665)
chr3 (223-274)||(44888147-44888198)
chr3 (239-305)||(19890890-19890956)
chr3 (209-279)||(26846105-26846175)
chr3 (236-274)||(31675173-31675211)
chr3 (236-274)||(31921209-31921247)
chr3 (234-274)||(9509997-9510037)
chr3 (234-274)||(9517972-9518012)
chr3 (47-115)||(20531720-20531788)
chr3 (223-273)||(14854146-14854196)
chr3 (237-279)||(26010285-26010327)
chr3 (209-279)||(47537506-47537576)
chr3 (234-274)||(17620293-17620333)
[»] chr1 (20 HSPs)
chr1 (5-347)||(6050773-6051115)
chr1 (5-347)||(35541219-35541561)
chr1 (5-347)||(11908733-11909075)
chr1 (5-306)||(47622705-47623006)
chr1 (5-108)||(43388774-43388877)
chr1 (223-274)||(22191627-22191678)
chr1 (80-300)||(2491429-2491649)
chr1 (299-347)||(51052650-51052698)
chr1 (224-274)||(3073993-3074043)
chr1 (223-274)||(21405081-21405132)
chr1 (234-274)||(52691715-52691755)
chr1 (236-279)||(25504852-25504895)
chr1 (236-274)||(3544960-3544998)
chr1 (236-274)||(20987417-20987455)
chr1 (236-274)||(26805204-26805242)
chr1 (220-274)||(28358133-28358187)
chr1 (209-278)||(30110757-30110826)
chr1 (234-279)||(48265575-48265620)
chr1 (236-276)||(30970467-30970507)
chr1 (234-274)||(52470039-52470079)
[»] chr5 (24 HSPs)
chr5 (5-347)||(42513890-42514232)
chr5 (5-347)||(30731942-30732284)
chr5 (5-347)||(12825369-12825711)
chr5 (5-347)||(27116801-27117131)
chr5 (5-347)||(23238554-23238895)
chr5 (5-333)||(31641695-31642023)
chr5 (5-333)||(28535303-28535631)
chr5 (5-333)||(35983419-35983747)
chr5 (5-333)||(42928315-42928643)
chr5 (5-306)||(27795694-27795996)
chr5 (5-108)||(10777193-10777296)
chr5 (5-108)||(25857052-25857155)
chr5 (7-108)||(8299812-8299913)
chr5 (8-303)||(33169872-33170167)
chr5 (223-303)||(24408142-24408222)
chr5 (5-108)||(18089392-18089494)
chr5 (223-270)||(23878398-23878445)
chr5 (236-274)||(476456-476494)
chr5 (209-279)||(20208551-20208621)
chr5 (236-273)||(380145-380182)
chr5 (236-277)||(11574553-11574594)
chr5 (236-277)||(22095109-22095150)
chr5 (233-303)||(18089617-18089687)
chr5 (236-273)||(16907530-16907567)
[»] scaffold0472 (1 HSPs)
scaffold0472 (5-347)||(3422-3764)
[»] chr6 (35 HSPs)
chr6 (111-344)||(2553810-2554043)
chr6 (141-344)||(21168372-21168574)
chr6 (8-294)||(24767060-24767346)
chr6 (5-78)||(2554045-2554118)
chr6 (46-307)||(15958482-15958743)
chr6 (5-108)||(17573284-17573387)
chr6 (5-108)||(17605962-17606065)
chr6 (5-306)||(14372619-14372920)
chr6 (5-108)||(10576878-10576981)
chr6 (5-135)||(13938101-13938231)
chr6 (5-108)||(20882661-20882764)
chr6 (23-118)||(33185834-33185929)
chr6 (5-108)||(21629735-21629838)
chr6 (239-333)||(20882895-20882989)
chr6 (223-303)||(13937914-13937994)
chr6 (234-274)||(26513967-26514007)
chr6 (212-298)||(5041737-5041823)
chr6 (224-274)||(29055763-29055813)
chr6 (236-277)||(5085885-5085926)
chr6 (233-277)||(23065903-23065947)
chr6 (234-274)||(25350466-25350506)
chr6 (260-307)||(11462617-11462664)
chr6 (239-302)||(17111001-17111064)
chr6 (236-279)||(19255878-19255921)
chr6 (244-279)||(25318092-25318127)
chr6 (244-279)||(26205586-26205621)
chr6 (236-279)||(33640156-33640199)
chr6 (209-279)||(649898-649968)
chr6 (234-279)||(333532-333577)
chr6 (234-279)||(18051306-18051351)
chr6 (245-298)||(18682402-18682455)
chr6 (245-330)||(21629975-21630060)
chr6 (234-274)||(900711-900751)
chr6 (223-255)||(7956514-7956546)
chr6 (234-274)||(34180175-34180215)
[»] chr2 (19 HSPs)
chr2 (171-333)||(41207200-41207362)
chr2 (46-306)||(40176879-40177139)
chr2 (5-304)||(12645749-12646048)
chr2 (5-306)||(28252931-28253232)
chr2 (234-279)||(36804150-36804195)
chr2 (223-271)||(12807996-12808044)
chr2 (234-274)||(18844490-18844530)
chr2 (224-274)||(16315622-16315672)
chr2 (234-279)||(36804365-36804410)
chr2 (239-304)||(38604241-38604306)
chr2 (5-108)||(14440155-14440256)
chr2 (234-274)||(18489051-18489091)
chr2 (234-302)||(31093468-31093536)
chr2 (244-279)||(22052865-22052900)
chr2 (223-274)||(32991328-32991379)
chr2 (235-285)||(44547706-44547756)
chr2 (236-273)||(7300919-7300956)
chr2 (236-277)||(15017916-15017957)
chr2 (234-274)||(21517685-21517725)
[»] scaffold0555 (1 HSPs)
scaffold0555 (236-274)||(7911-7949)
[»] scaffold0179 (2 HSPs)
scaffold0179 (209-279)||(7766-7836)
scaffold0179 (209-279)||(12700-12770)
[»] scaffold0112 (1 HSPs)
scaffold0112 (209-279)||(15482-15552)
[»] scaffold0043 (1 HSPs)
scaffold0043 (236-274)||(34468-34506)
[»] scaffold0189 (1 HSPs)
scaffold0189 (236-274)||(6331-6369)
[»] scaffold0007 (1 HSPs)
scaffold0007 (234-279)||(182367-182412)


Alignment Details
Target: scaffold0034 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 105471 - 105813
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  105471 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 105570  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  105571 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 105670  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  105671 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 105770  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  105771 tcagtgttagacagatggctctggttacctaatcatgatgatg 105813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 8300315 - 8299973
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8300315 agagatgggataggtgagggtggcgagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 8300216  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  8300215 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 8300116  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8300115 gggcggggaggcgttgaggtggcgtcggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 8300016  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  8300015 tcagtgttagacagatggctctggttacctaatcatgatgatg 8299973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 7924898 - 7924556
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  7924898 agagatgggatacgtgagggtggagagggatggtttgggtcttgtgttacgaggagagtgggacatggggcacatactgattttgggcgtgattgttggt 7924799  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  7924798 gtggagatgtccctctttgtgtccggtttatgcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 7924699  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7924698 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 7924599  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  7924598 tcagtgttagacagatggctctggttacctaatcatgatgatg 7924556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 337
Target Start/End: Original strand, 41664996 - 41665329
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgattttt-ggcgtgattgttgg 103  Q
    |||||||||||| |||||||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||||| |||||||||| |||||||| |||||    
T  41664996 agagatgggatatgtgagggtggagagggttggtttgggacgtgtgttaggaggagggtgggagatggtgcagacactgattttttggcgtgatcgttgg 41665095  T
Q  104 tgtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatg 203  Q
    ||  ||||||||||| | |||| |||||||||||||||||||||||||  |||| |   |||| | |||||||||||||||||| || ||||||||||||    
T  41665096 tgcagagatgttcctttgtgtgaccggtttaggcgcctttttgacttgaatgttaacagatcaatttcagttaggaatatgttcttgttgggggtggatg 41665195  T
Q  204 tgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  41665196 tgggtggggaggtgttgcggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggttttattactaacagtttctttacagga 41665295  T
Q  304 atcagtgatagacagatggctatggttacctaat 337  Q
    |||||||| ||||||||| || ||||||||||||    
T  41665296 atcagtgacagacagatgactttggttacctaat 41665329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 32267074 - 32266732
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||  |||||||||    
T  32267074 agagatgggataggtgagggtggagaggggtggtttgggtcttgtgttaggaggaaggtgggagatggtgcggatactgatttttggcggtattgttggt 32266975  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || ||||  |||||   ||| ||||||||||||  ||||||  ||||| |||| ||||| ||  | ||| || | |||||||||||    
T  32266974 gcggagatgttccactgtgtgctcggttagagcgtctttttgacttgagtgttcacaaatcaatctccgttagaaactttttcttgttcggggtggatgt 32266875  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  32266874 gggtggggaggcgttgcggtggcgtaggaggttgtgggcctgggaggaggagttggtagaggagtgtagggctttattgctaacagtttctttgcaggaa 32266775  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||  |||||||||||| ||| |||||||| |||||||||    
T  32266774 tcagtgtcagacagatggctttgggtacctaatcatgatgatg 32266732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 9923113 - 9922785
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||| ||||||||||    
T  9923113 agagatgggataggtgagggtggagagggttggtttgggtcttgtgttaggaggagggtgggagacggtgcagagacagatttttggcgggattgttggt 9923014  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||  | ||||   ||||||| ||||||| ||||||| ||||  |  || || |||| |||||||| |||||| || |||||||||||||    
T  9923013 gtggagatgttccattgtgtgaatggtttagtcgcctttatgacttgactgtgaacaaaccaatctctgttaggaacatgttcttgttgggggtggatgt 9922914  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  9922913 cggtggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaagagttggtagaggagtctagggctttattactaacagtttcattgcaggaa 9922814  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| |||||| | ||||||||    
T  9922813 tcagtgacagatagatggatttggttacc 9922785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 56 - 337
Target Start/End: Complemental strand, 13396849 - 13396568
Alignment:
Q  56 aggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctg 155  Q
    ||||| ||||||||||| ||||| | |||||||||||||||| ||||||| ||||||||||| || |||| |||||||||||||||||||||||||  ||    
T  13396849 aggagggtgggagatggtgcagacattgatttttggcgtgatcgttggtgcggagatgttccactgtgtgaccggtttaggcgcctttttgacttgaatg 13396750  T
Q  156 ttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggagga 255  Q
    || |  ||||| | |||||||||||||||||| || |||||||||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||||    
T  13396749 ttaacaaatcaatttcagttaggaatatgttcttgttgggggtggatgtgggtggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggagga 13396650  T
Q  256 gttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacctaat 337  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  13396649 gttggtagaggagtgtagggttttattactaacaatttctttgcaggaatcagtgacagacagatggctttggttacctaat 13396568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 160 - 347
Target Start/End: Complemental strand, 172460 - 172273
Alignment:
Q  160 tcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttg 259  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  172460 tcaatcagtctcagttaggaatatgttcctgctgagggtggatgtgggcggggaggcgttgaggtggcgtaggcggttgtgggcctgggaggagaagttg 172361  T
Q  260 gtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172360 gtagaggagtgtagggctttgttactaatagtttctttgcaggaatcagtgatagacagatggctatggttacctaataatgatgatg 172273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 13879115 - 13879416
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||||||||| ||||||| |  ||||||||||||||| ||||| ||||  || ||||||||||||||||| ||||||||||    
T  13879115 agagatgggataggcgagggtggagagggttggtttgtggattgtgttaggaggagggtgggggatgaagctgatactgatttttggcgagattgttggt 13879214  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   ||||||  | ||||  || |||||||| |||| ||||||  || |  || ||||| || | || ||||| |||||| || | |||||||| |     
T  13879215 gtggtagtgttccgttgtgtgagcgctttaggcgtctttatgacttagctatcgataaatcaatcacggtgaggaacatgttcttgttcggggtggagga 13879314  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||  | || |  ||||||| | ||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13879315 tggtgggggagcgtggcagtggcgtcgccggttatgggtgtgggaggaggacttggtagaggagtgtagggctttattactaacagtctctttgcaggaa 13879414  T
Q  305 tc 306  Q
    ||    
T  13879415 tc 13879416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 306
Target Start/End: Complemental strand, 25090899 - 25090598
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| ||||||||| |||| ||||||  |  ||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||    
T  25090899 agagatgggataggcgagggtggaaagggttggtttacggattgtgttaggaggagggtgggggatggagcagatactgatttttggcgagattgttggt 25090800  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   ||||||  | ||||  || |||||||| |||||||||||  |     || ||||| || | || ||||| |||||| || |||||||||| |     
T  25090799 gtggtagtgttccgttgtgtgagcgctttaggcgactttttgacttaaccaccaataaatcaatcacggtgaggaacatgttcttgttgggggtggagga 25090700  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||  | || |  ||||||| | || || | || |||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  25090699 tggtgggggagcgtggcagtggcgtcgccgtttattggtgtgggaggagaaattggtagaggagtgtagggctttattactaacagtctctttgcaggaa 25090600  T
Q  305 tc 306  Q
    ||    
T  25090599 tc 25090598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 17699992 - 17699889
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| |||||||    ||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||    
T  17699992 agagatgggataggtgagggtggggagggctggtttgcaggttgtgttaggaggagggtgggggatggagccgatactgatttttggcgagattgttggt 17699893  T
Q  105 gtgg 108  Q
    ||||    
T  17699892 gtgg 17699889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 20824811 - 20824708
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||    
T  20824811 agagatgggataggtgagggtggggagggctggttttcaggttgtgttaggaggagggtgggggatggagctgataccgatttttggcgtgattgttggt 20824712  T
Q  105 gtgg 108  Q
    ||||    
T  20824711 gtgg 20824708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 172667 - 172716
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttag 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172667 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttag 172716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 12134610 - 12134566
Alignment:
Q  235 gttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  12134610 gttgtgggcgtgggaggaggacttggtagaggagtgtagggcttt 12134566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 43270964 - 43270861
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||| |||||||    ||||||||||||||| || || ||||| || ||||| ||||||||||  || |||||||    
T  43270964 agagatgggataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgatttttggccagactgttggt 43270865  T
Q  105 gtgg 108  Q
    ||||    
T  43270864 gtgg 43270861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 42177180 - 42177280
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||    ||||||| |  ||||||||||||||| ||||| |||||||| || |  ||||||||||| ||||||||||    
T  42177180 agagatgggataggcgagggtggggat---tggtttgcgggttgtgttaggaggagggtgggggatggggccgaaatcgatttttggcgagattgttggt 42177276  T
Q  105 gtgg 108  Q
    ||||    
T  42177277 gtgg 42177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 15439465 - 15439412
Alignment:
Q  220 gaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    ||||||||| ||| | |||||||||||||||||||||||||| | |||||||||    
T  15439465 gaggtggcggaggagattgtgggcgtgggaggaggagttggttgtggagtgtag 15439412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 15530769 - 15530716
Alignment:
Q  220 gaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    ||||||||| ||| | |||||||||||||||||||||||||| | |||||||||    
T  15530769 gaggtggcggaggagattgtgggcgtgggaggaggagttggttgtggagtgtag 15530716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 25193372 - 25193332
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  25193372 ggttgtgggcgcgggaggaggagttggtggaggagtgtagg 25193332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 4987924 - 4987967
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  4987924 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 4987967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 13200343 - 13200296
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttacta 286  Q
    |||| ||||||||||||||||||||||||||||| || ||| ||||||    
T  13200343 tgggtgtgggaggaggagttggtagaggagtgtatggatttattacta 13200296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 42177471 - 42177520
Alignment:
Q  259 ggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcag 308  Q
    |||||| |||||||||| ||| ||||||| ||| ||||||||||||||||    
T  42177471 ggtagaagagtgtagggatttattactaatagtctctttgcaggaatcag 42177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 4937756 - 4938098
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4937756 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 4937855  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  4937856 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 4937955  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4937956 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 4938055  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  4938056 tcagtgttagacagatggctctggttacctaatcatgatgatg 4938098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 11276876 - 11277222
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||| ||||||    
T  11276876 agagatgggataggtgagggtggagaggggtggtttgggtcttgtgttaggaggagggtgggagatggtgcagataccgatttttggtgtgatcgttggt 11276975  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgc----ctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtgg 200  Q
    | ||||||||||| || |||| ||||||| ||||     ||||||||||||  |||  |  ||||| |||||||||||||||||||| || |||||||||    
T  11276976 gcggagatgttccactgtgtgcccggtttgggcgtgcgtctttttgacttgaatgtagacaaatcaatctcagttaggaatatgttcttgttgggggtgg 11277075  T
Q  201 atgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgca 300  Q
    ||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  11277076 atgtgggtggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttattgctaacagtttctttgca 11277175  T
Q  301 ggaatcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||||||| |||||||||||| ||| |||||||| |||||||||    
T  11277176 ggaatcagtgacagacagatggctttgggtacctaatcatgatgatg 11277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 5 - 337
Target Start/End: Complemental strand, 47877495 - 47877163
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| ||||||||||| |||||||||||| | |||||||||| ||| |||||||| || ||| | || ||||||||||||||| ||||||    
T  47877495 agagatgggataggcgagggtggagatggatggtttgggacgtgtgttaggatgagggtgggagacggtgcataaacagatttttggcgtgatcgttggt 47877396  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || || | ||| ||||| ||||||| ||||||| ||||| |  ||||| |||||||||||||||||||| || |||||||||| ||    
T  47877395 gcggagatgttccactgtgcgaccgttttagtcgcctttatgacttgactgttaacaaatcaatctcagttaggaatatgttcttgttgggggtggacgt 47877296  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||| |||||||||||||| |||||||||    
T  47877295 gggtggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggaagagttggtagaggagtgtggggttttattactaacagtttccttgcaggaa 47877196  T
Q  305 tcagtgatagacagatggctatggttacctaat 337  Q
    ||||||| ||||||||| || ||||||||||||    
T  47877195 tcagtgacagacagatgactttggttacctaat 47877163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 29968486 - 29968144
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| || ||||| |||||||||||  |||||||||    
T  29968486 agagatgggataggtgagggtggagagggatgatttgggtcttgtgttaggaggaaggtgggagatggtgcggataccgatttttggcggaattgttggt 29968387  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | |||||||||||  | ||||  |||||| || | ||||||||||||  ||||||  ||||| |||| ||||| ||  | ||| || |||||||||||||    
T  29968386 gcggagatgttccattgtgtgctcggtttgggagtctttttgacttgagtgttcacaaatcaatctccgttagaaactttttcttgttgggggtggatgt 29968287  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| ||||||||||| |||| ||||| || |||||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  29968286 gggtggggaggcgttgcggtggcgtaggaggttatgggcttgagaggaggaattggtagaggagtgtagggctttattgctaacagtttctttgcaggaa 29968187  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||| |||||||||||| ||| |||||||| |||||||||    
T  29968186 tcagtgacagacagatggctttgggtacctaatcatgatgatg 29968144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 17721147 - 17720819
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| || ||||||||| | ||||||||||    
T  17721147 agagatgggataggtgagggtggagagggttggtttgggtcttgtgttaggaggagggtgggagacggtgcagagacagatttttggtgggattgttggt 17721048  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||| |  | ||||  |||||||| ||||||| ||||||| ||||  |  ||  | |||| |||||||| ||| || || |||||||||||||    
T  17721047 gtggagatgtttcattgtgtgaacggtttagtcgcctttatgacttgactgtgaacaaactaatctctgttaggaacatgatcttgttgggggtggatgt 17720948  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| || |||||| |||||||||||||| |||||||||    
T  17720947 cggtggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaagagttggtagaggagtttanggctttattactaacagtttcattgcaggaa 17720848  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| |||||| | ||||||||    
T  17720847 tcagtgacagatagatggatttggttacc 17720819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 235066 - 235393
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||||||||| || |||||| | |||||||||||||| ||||||||  |  || | || ||||||||||||||| ||||||    
T  235066 agagatgggataggcgagggtggagagggctgatttgggacgtgtgttaggaggagggtgggagacagtacaaaaacagatttttggcgtgatcgttggt 235165  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || |||| ||| ||||| ||||||| ||||||| ||||| |  ||||| ||||||||| |||||||||| || ||||| |||| ||    
T  235166 gcggagatgttccactgtgtgaccgttttagtcgcctttatgacttggctgttaacaaatcaatctcagttatgaatatgttcttgttgggg-tggacgt 235264  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| ||||||||  ||| |||||||| ||||||||  ||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  235265 gggtggggaggcgttgcggtggcgtcagcgattgtgggcttgggaggaaaagttggtagaggagtgtagggttttattactaacagtttccttacaggaa 235364  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| ||||| || ||||||||    
T  235365 tcagtgacagatagatgactttggttacc 235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 131 - 336
Target Start/End: Complemental strand, 37919930 - 37919725
Alignment:
Q  131 tttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgta 230  Q
    |||||||||||||||||||||  |||| |  ||||| | |||||||| ||||||||| || |||||||||||||||| |||| ||||||| |||||||||    
T  37919930 tttaggcgcctttttgacttgaatgttaaaaaatcaatttcagttagaaatatgttcttgttgggggtggatgtgggtgggggggtgttgcggtggcgta 37919831  T
Q  231 ggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggtt 330  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| | ||| |||||| || ||    
T  37919830 ggcggttgtgggcttgggaggagaagttggtagaggagtgtagagttttattactaacagtttctttgcaggaatcagtgacaaacatatggctttgatt 37919731  T
Q  331 acctaa 336  Q
    ||||||    
T  37919730 acctaa 37919725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 31423114 - 31423011
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||||||||||| |  ||||||||||||||| ||||  |||||    || || ||||||||||| ||||||||||    
T  31423114 agagatgggataggcgagggtggggagggatggtttgcgggttgtgttaggaggagggtggaggatggaattgaaacggatttttggcgagattgttggt 31423015  T
Q  105 gtgg 108  Q
    ||||    
T  31423014 gtgg 31423011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 37255042 - 37254970
Alignment:
Q  233 cggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaat 305  Q
    ||||| |||| |||||||||||| |||||||| |||||||||| ||| |||||||||   |||||||||||||    
T  37255042 cggttatgggtgtgggaggaggacttggtagaagagtgtagggatttattactaacaaactctttgcaggaat 37254970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 37255270 - 37255170
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||| |||||| |||||||  ||| | ||||||| |  ||||||||||||||| ||||| ||||| || || || ||||||||||| ||||||||||    
T  37255270 agagatgagataggcgagggtgaggagagttggtttgcgggttgtgttaggaggagggtgggggatggagccgaaaccgatttttggcgagattgttggt 37255171  T
Q  105 g 105  Q
    |    
T  37255170 g 37255170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 17055823 - 17055772
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||| || |||||||||||| ||| ||||||||||    
T  17055823 gtggcgtaggcggttgtgggcatgagaggaggagttgttaggggagtgtagg 17055772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 34232007 - 34231940
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggc 276  Q
    ||||||| ||||| |||| ||||| |||||||||| ||||||||||||  | ||||||||||||||||    
T  34232007 ggggaggcgttgaagtggagtaggaggttgtgggcctgggaggaggaggagttagaggagtgtagggc 34231940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 36363805 - 36363738
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    ||||||| ||||||||| ||| || |||||||||||||||| || ||||| || ||||||||||||||    
T  36363805 ttgtgggtgtgggaggaagagctgctagaggagtgtagggcattattacttactgtttctttgcagga 36363738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 22819564 - 22819614
Alignment:
Q  224 tggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  22819564 tggcgtaggaggttgtgggcctgggaggaggagttgttaggggagtgtagg 22819614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 28173835 - 28173873
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28173835 ttgtgggcgtgggaggaggagttggtagcggagtgtagg 28173873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 25619743 - 25619674
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcag 308  Q
    |||| ||||||||||||  ||||||| ||||||| || ||| ||||||||||  ||||||||||||||||    
T  25619743 tgggtgtgggaggaggacctggtagaagagtgtaaggatttattactaacagactctttgcaggaatcag 25619674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 11339030 - 11338990
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  11339030 ggttgtgggcgtgggaggaggaaatggtagaggagtgtagg 11338990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 27941353 - 27941389
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgta 272  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27941353 ttgtgggcgtgggaggaggagttgttagaggagtgta 27941389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 31422882 - 31422814
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatca 307  Q
    |||| ||||||||| || |||||||||||||||| |  ||| ||||||||||  |||||||||||||||    
T  31422882 tgggtgtgggaggatgacttggtagaggagtgtatgaatttattactaacagactctttgcaggaatca 31422814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 25924351 - 25924312
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtaggg 275  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  25924351 ttgtgggcgtgggaggaggagttgttagtggagtgtaggg 25924312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 45943124 - 45943089
Alignment:
Q  244 gtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  45943124 gtgggaggaggagttgctagaggagtgtagggcttt 45943089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 45992857 - 45992814
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  45992857 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 45992814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 8722982 - 8723020
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  8722982 ttgtgggcgtgagaggaggagatggtagaggagtgtagg 8723020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 41339833 - 41339763
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || |||||||||  |  |||||||||||||||||||||| ||  |||||||||||||| ||||    
T  41339833 ggggaggggtggaggtggcgatgcaggttgtgggcgtgggaggaggaattattagaggagtgtaggacttt 41339763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 27218966 - 27219022
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||| || |||||||  ||||| |||||| ||||||||||||||||| ||||    
T  27218966 gtggcgtagacgattgtgggtttgggaagaggagatggtagaggagtgtaggtcttt 27219022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 34103755 - 34103723
Alignment:
Q  241 ggcgtgggaggaggagttggtagaggagtgtag 273  Q
    ||||||||||||||||||||||| |||||||||    
T  34103755 ggcgtgggaggaggagttggtagtggagtgtag 34103723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 44433678 - 44433642
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgta 272  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44433678 ttgtgggcgtgggaggaggagttggtggtggagtgta 44433642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 23642219 - 23642561
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23642219 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 23642318  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  23642319 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 23642418  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23642419 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 23642518  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  23642519 tcagtgttagacagatggctctggttacctaatcatgatgatg 23642561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 337
Target Start/End: Complemental strand, 47419316 - 47418984
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47419316 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 47419217  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||    
T  47419216 gtggagatgttcctctttgtgtccggtttccgcgcctttttggcttgtctgttcacaattcaatctcagttaggaatatgttcctgctgggggtggatgt 47419117  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  47419116 gggcggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggaggaggtggtagaggagtgtagggctttgttactaacaatttctttgcaggat 47419017  T
Q  305 tcagtgatagacagatggctatggttacctaat 337  Q
    |||||| |||| |||||||| ||||||||||||    
T  47419016 tcagtgttagatagatggctctggttacctaat 47418984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 344
Target Start/End: Complemental strand, 15740730 - 15740394
Alignment:
Q  7 agatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgt 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||     
T  15740730 agatgagataggtgagggtggagagggatggtttgggtcttgtgt-aggaggagggtgggagatggtgcagatactgatttttggcgtgatcgttggtgc 15740632  T
Q  107 ggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgg 206  Q
    ||||||||||| || |||| ||||||| |||| ||||||||||||  ||||||  ||||| |||| ||||||||||| ||| || ||||||| || ||||    
T  15740631 ggagatgttccactgtgtgcccggtttgggcgtctttttgacttgaatgttcacaaatcaatctctgttaggaatatattcttgttgggggtagacgtgg 15740532  T
Q  207 gcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatc 306  Q
    | ||||||| ||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15740531 gaggggaggcgttgcagtggcataggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttattactaacagtttctttgcaggaatc 15740432  T
Q  307 agtgatagacagatggctatggttacctaataatgatg 344  Q
    ||||| |||||||||||| |||||||||||| ||||||    
T  15740431 agtgacagacagatggctttggttacctaatcatgatg 15740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 337
Target Start/End: Complemental strand, 19755779 - 19755447
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||| ||||| || ||||||||||||||| ||||||    
T  19755779 agagatgggataggtgagggtggagagggatggtttgggatgtgtgttaggaggagggtgggagatggtgcagacaccgatttttggcgtgatcgttggt 19755680  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || |||| |||||||||||||||||||||||||  |||| |  ||||| | ||| |||||||||||||| || |||||||||||||    
T  19755679 gcggagatgttccactgtgtgaccggtttaggcgcctttttgacttgaatgttaacaaatcaatttcatttaggaatatgttcttgttgggggtggatgt 19755580  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  19755579 gggtggggaggcgttgcggtggcgtaggcggttgtgggcttaggaggaggagttggtagaggagtgtagggttttattactaatagtttctttgcaggaa 19755480  T
Q  305 tcagtgatagacagatggctatggttacctaat 337  Q
    ||||||| |||||||||||| ||||||||||||    
T  19755479 tcagtgacagacagatggctttggttacctaat 19755447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 337
Target Start/End: Original strand, 19784027 - 19784359
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||| ||||| || ||||||||||||||| ||||||    
T  19784027 agagatgggataggtgagggtggagagggatggtttgggatgtgtgttaggaggagggtgggagatggtgcagacaccgatttttggcgtgatcgttggt 19784126  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || |||| |||||||||||||||||||||||||  |||| |  ||||| | ||| |||||||||||||| || |||||||||||||    
T  19784127 gcggagatgttccactgtgtgaccggtttaggcgcctttttgacttgaatgttaacaaatcaatttcatttaggaatatgttcttgttgggggtggatgt 19784226  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  19784227 gggtggggaggcgttgcggtggcgtaggcggttgtgggcttaggaggaggagttggtagaggagtgtagggttttattactaatagtttctttgcaggaa 19784326  T
Q  305 tcagtgatagacagatggctatggttacctaat 337  Q
    ||||||| |||||||||||| ||||||||||||    
T  19784327 tcagtgacagacagatggctttggttacctaat 19784359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 344
Target Start/End: Original strand, 1828168 - 1828507
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||| ||||||    
T  1828168 agagatgggataggtgagggtggtgagggatggtttgggtcttgtgttaggaggagggtgggagatggtgcagacactgacttttggcgtgatcgttggt 1828267  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||| ||| || |||| ||||||| |||| ||||||||||||  | ||||  ||||  |||| ||||||||||||||| || ||||||| || ||    
T  1828268 gcggagatgctcccctgtgtgcccggtttgggcgtctttttgacttgagtattcacaaatctatctctgttaggaatatgttcttgttgggggtagacgt 1828367  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  1828368 gggaggggaggcgttgtggtggcataggcggttgtgggcttgggaggaggagttggtagaggagtggagggctttattactaacagtttctttgcaggat 1828467  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatg 344  Q
    |||||||  |||| |||||| |||||||||||| ||||||    
T  1828468 tcagtgactgacaaatggctttggttacctaatcatgatg 1828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 168 - 347
Target Start/End: Original strand, 47685686 - 47685865
Alignment:
Q  168 tctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagagga 267  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||  |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  47685686 tctcagttaggaatatgttcttgttgggggtggatgtgggcggggaggcattgaggtggcgtgggcggctgtgggcttgggaggaggagttggtagagga 47685785  T
Q  268 gtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  47685786 gtgtagggctttgttactaacagtttctttgcaggaatcggtgatagacagatggctttggttacctaatcatgatgatg 47685865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 54482787 - 54483088
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||||||| | ||||||| |  ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||    
T  54482787 agagatgggataggcgagggtggagagagttggtttgtggattgtgttaggaggagggtgggggatggagctgataccgatttttggcgagattgttggt 54482886  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   ||||||  | ||||  || |||||||  |||| ||||||  |  |  || ||||| |  | || ||||| |||||| || |||||||||| |     
T  54482887 gtggtagtgttcccttgtgtgagcgctttaggcatctttatgacttagccatcaataaatcaattacggtgaggaacatgttcttgttgggggtggagga 54482986  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||  | || |  ||||||| | ||||| |||| |||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  54482987 tggtgggggagcgtggcagtggcgtcgccggttatgggtgtgggaggaggatttggtagaggagtgtaggggtttattactaacagtctctttgcaggaa 54483086  T
Q  305 tc 306  Q
    ||    
T  54483087 tc 54483088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 48312606 - 48312307
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||| |||||| |||||||||||||| ||||||| |  ||||||||||||||| ||||| ||||| || ||||  ||||||||||| ||||||||||    
T  48312606 agagatgagataggcgagggtggagagggttggtttgtggattgtgttaggaggagggtgggggatggagctgatatcgatttttggcgagattgttggt 48312507  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||  |||||||  | ||||  || |||||||| |||| ||||||  |  |  || ||||| || | || ||||| |||||| || |||||||||| |     
T  48312506 gtgg-tatgttccgttgtgtgagcgctttaggcgactttatgacttagccatcaataaatcaatcacggtgaggaacatgttcttgttgggggtggagga 48312408  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || |||| || || |  ||||||| | ||||| | || ||| |||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  48312407 tggtgggggggcgtggcagtggcgtcgccggttattggtgtgtgaggaggacttggtagaggagtgtagggctttattactaacagtctatttgcaggaa 48312308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 2821662 - 2821993
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||| |||||||    ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||    
T  2821662 agagatgggataggcgagggtggggagggttggtttgcagattgtgttaggaggagggtgggggatggagctgataccgatttttggcgagattgttggt 2821761  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   ||||||  | ||||  || |||||||| |||| ||||||  |  |  || || || || | || ||||| |||||| || |||||||||| |     
T  2821762 gtggtagtgttccgttgtgtgagcgctttaggcgtctttatgacttagccatcaataaagcaatcacggtaaggaacatgttcttgttgggggtggagga 2821861  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggagg---agttggtagaggagtgtagggctttgttactaacagtttctttgcag 301  Q
     || ||||  | || | |||||||| | || || |||| |||||||||||   | |||||||||||||||||||||||  |||||||||| |||||||||    
T  2821862 tggtgggggagcgtggtggtggcgtcgccgcttatgggtgtgggaggaggaccaattggtagaggagtgtagggctttaatactaacagtctctttgcag 2821961  T
Q  302 gaatcagtgatagacagatggctatggttacc 333  Q
    ||||| || |  ||||||||| | ||||||||    
T  2821962 gaatctgttactgacagatgggtgtggttacc 2821993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 5789720 - 5789871
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||||| ||||| ||| | ||||| ||  ||| |||||||||||||||||||||||    
T  5789720 agagatgggataggcgagggtggggagggatggtttgcgtcgtgtgttagtaggagggtgcgggatggagccaatattgatttttggcgtgattgttggt 5789819  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgt 156  Q
    ||||| |||||||  | ||||| || ||||| ||||| | ||||||| ||||    
T  5789820 gtggaaatgttccgttgtgtgtgcgttttagacgcctatatgacttggctgt 5789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23647877 - 23647939
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtggga 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23647877 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtggga 23647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 55725333 - 55725437
Alignment:
Q  4 cagagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttgg 103  Q
    ||||||||||||||| |||||||| ||||| ||||||| |  ||||||||||| ||| ||||||||||| ||    || ||||||||||| |||||||||    
T  55725333 cagagatgggataggcgagggtggggagggttggtttgcggattgtgttaggatgagggtgggagatggagccacaacagatttttggcgagattgttgg 55725432  T
Q  104 tgtgg 108  Q
    |||||    
T  55725433 tgtgg 55725437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 46146187 - 46146046
Alignment:
Q  7 agatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgatt-gttggtg 105  Q
    |||||||||||| ||||| ||||| || |||||||  ||  ||||||||||    |||||||| || || || ||||| ||||||||||||| |||||||    
T  46146187 agatgggataggagagggcggagatggttggtttgcatcgggtgttaggagacaggtgggagacggtgctgagactgacttttggcgtgatttgttggtg 46146088  T
Q  106 tggagatgttcctctttgtgtccggtttaggcgcctttttga 147  Q
    |||| |||||||  ||||||| || ||||| || ||||||||    
T  46146087 tggaaatgttccgttttgtgtgcgatttagacggctttttga 46146046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 19735363 - 19735475
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||| | ||||| ||||||||  |||||| |||  ||||||||||    |||||||| || || || ||||| ||||||| |||||||||||    
T  19735363 agagatgggataagagagggcggagagggtaggtttgtgtcgggtgttaggagacaggtgggagacggtgctgagactgacttttggcatgattgttggt 19735462  T
Q  105 gtggagatgttcc 117  Q
    ||||| |||||||    
T  19735463 gtggaaatgttcc 19735475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 29553599 - 29553642
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  29553599 ttgtgggcgtgggaggaggagttgttagaggagtgtaggacttt 29553642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 49926125 - 49926168
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  49926125 ttgtgggcgtgggaggaggagttgttagtggagtgtagggcttt 49926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 23657676 - 23657638
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23657676 ttgtgggcgtgggaggaggagttgttagaggagtgtagg 23657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 46543272 - 46543222
Alignment:
Q  224 tggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||| || |||||||||||||||||||||||| ||||||| |||||||||    
T  46543272 tggcggagacggttgtgggcgtgggaggaggagatggtagaagagtgtagg 46543222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11586826 - 11586935
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| | ||| |||||   |  ||||||||||||||| |||   |||||  | || |||||||| |||||||| |||||||    
T  11586826 agagatgggataggtgagggtggggtgggctggttctcggattgtgttaggaggagggtgaaggatggatccgaaactgatttctggcgtgactgttggt 11586925  T
Q  105 gtggagatgt 114  Q
    |||| |||||    
T  11586926 gtggtgatgt 11586935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 19647990 - 19647947
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  19647990 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 19647947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 5789951 - 5790021
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatc 306  Q
    |||| |||||||||||| || |||||||||||||||||||   | ||||| |||||| ||||| |||||||    
T  5789951 ttgtaggcgtgggaggaagatttggtagaggagtgtagggagcttttacttacagttactttgtaggaatc 5790021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 8935353 - 8935315
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    |||||||||||||||||| || |||||||||||||||||    
T  8935353 tgggcgtgggaggaggagatgttagaggagtgtagggct 8935315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 11587082 - 11587124
Alignment:
Q  261 tagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||    
T  11587082 tagaggaatgtagggctttattactgacagtttctttgcagga 11587124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 20395879 - 20395834
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||| ||||||||||||  | |||||||||||||||||||    
T  20395879 ggttgtgggcttgggaggaggaggagttagaggagtgtagggcttt 20395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 28713178 - 28713215
Alignment:
Q  237 tgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||||||  |||||||||    
T  28713178 tgtgggcgtgggaggaggagttggtagcagagtgtagg 28713215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 35324187 - 35324260
Alignment:
Q  199 ggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgta 272  Q
    ||||| ||| |||||||| | || |||||||||| | |||||||| ||||||||||| ||||||| | ||||||    
T  35324187 ggatgagggaggggaggtttggaagtggcgtaggagattgtgggcttgggaggaggatttggtagtgaagtgta 35324260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 4640536 - 4640576
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||| ||||||||||| ||| ||||||||||||||    
T  4640536 ggttgtgggcttgggaggaggacttgttagaggagtgtagg 4640576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 48497914 - 48497954
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||||||||||||  ||||||||| ||||    
T  48497914 tgggcgtgggaggaggagttggtagtagagtgtaggacttt 48497954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 2364789 - 2364447
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364789 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 2364690  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  2364689 gtggtgatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 2364590  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364589 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 2364490  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  2364489 tcagtgttagacagatggctctggttacctaatcatgatgatg 2364447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 5 - 337
Target Start/End: Original strand, 10323199 - 10323531
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10323199 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 10323298  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||    
T  10323299 gtggagatgttcctctttgtgtccggtttccgcgcctttttggcttgtctgttcacaattcaatctcagttaggaatatgttcctgctgggggtggatgt 10323398  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10323399 gggcggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggat 10323498  T
Q  305 tcagtgatagacagatggctatggttacctaat 337  Q
    |||||| |||| |||||||| | ||||||||||    
T  10323499 tcagtgttagatagatggctctagttacctaat 10323531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 19919857 - 19920199
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||||||||| || ||||| ||||||  | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  19919857 agagatgggataggtgagggaggtgagggttggtttcagacttgtgttaggaggagggtgggagatggtgcagatactgatttttggcgtgattgctggt 19919956  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||| || |||  | |||||||| |||  |||||||||||||||| |||||||  ||||  ||||||||||||||||||| |||||||||||||||||    
T  19919957 gtggagctgatccattgtgtgtccgatttccgcgcctttttgacttgactgttcacaaatctatctcagttaggaatatgtttctgctgggggtggatgt 19920056  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    |||||||||||  |||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19920057 gggcggggaggcattgaggtgtcgtaggaggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 19920156  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  19920157 tcagtgatagacagatggctctggttacctaatcatgatgatg 19920199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 5 - 337
Target Start/End: Original strand, 34332443 - 34332775
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||  | ||||||||||||||| ||||||    
T  34332443 agagatgggataggtgagggtggagagggatggtttgggacgtgtgttaggaggagggtgggagatggtgcagactcagatttttggcgtgatcgttggt 34332542  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaa-tcagtctcagttaggaatatgttcctgctgggggtggatg 203  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||  |||| ||||| ||| |||||||||||||||||||| || ||||||||||      
T  34332543 gtggaaatgttccactgtgtgtccggtttaggcgcctttttgacttgaatgtt-atcaaatcaatctcagttaggaatatgttcttgttgggggtggaca 34332641  T
Q  204 tgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    |||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  34332642 tgggtggggaggcgttgcggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggttttattactaacagtttctttgcagga 34332741  T
Q  304 atcagtgatagacagatggctatggttacctaat 337  Q
    |||||||  |||||||||||| ||||||||||||    
T  34332742 atcagtgtcagacagatggctttggttacctaat 34332775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 7313112 - 7312946
Alignment:
Q  181 tatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7313112 tatgttcctgctgggggtggatgtgggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttg 7313013  T
Q  281 ttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  7313012 ttactaacagtttctttgcaggaatcagtgatagacagatggctctggttacctaatcatgatgatg 7312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 331
Target Start/End: Complemental strand, 7032610 - 7032492
Alignment:
Q  213 aggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgat 312  Q
    |||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||| | ||||||||||| |||||    
T  7032610 aggtgttgcggtggcgtaggcgtttgtgggcttgggaggaagagttggtagaggagtttagggctttattactaacagttacattgcaggaatcggtgat 7032511  T
Q  313 agacagatggctatggtta 331  Q
    ||| |||||||| ||||||    
T  7032510 agatagatggctttggtta 7032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 333
Target Start/End: Original strand, 40930245 - 40930484
Alignment:
Q  83 gatttttggcgtgattgttggtgtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaata 182  Q
    |||||||||| |||||||||||| | | |||||||  | |||| ||| ||||| ||||||| ||||||| ||||  |  ||||| |||| ||||||||||    
T  40930245 gatttttggcatgattgttggtgcgtatatgttccattgtgtgaccgttttagtcgcctttatgacttggctgtgaacaaatcaatctctgttaggaata 40930344  T
Q  183 tgttcctgctggggg-tggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgt 281  Q
    ||||| || |||||| |||||||||| ||||||| |||| |||||            ||||| |||||||| |||||||||||||||||||||| ||| |    
T  40930345 tgttcttgttggggggtggatgtgggtggggaggcgttgcggtgg------------tgggcttgggaggaagagttggtagaggagtgtagggttttat 40930432  T
Q  282 tactaacagtttctttgcaggaatcagtgatagacagatggctatggttacc 333  Q
    ||||||||||||||||||| |||||||||| | | |||||||| ||||||||    
T  40930433 tactaacagtttctttgcaagaatcagtgacaaatagatggctttggttacc 40930484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 48569667 - 48569968
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||||| ||||| ||||| || ||||| ||||||||||  ||||||||||    
T  48569667 agagatgggataggtgagggtggggagggttggtttgtggattgtgttaggaggagggtgggggatggagctgataccgatttttggcaagattgttggt 48569766  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   |||||   | ||||  || |||| ||| |||| ||||||  | ||  || || || || | || ||||| |||||| || ||||||| || |     
T  48569767 gtggtagtgttctgttgtgtgagcgctttatgcgtctttatgacttagccgtcaataaagcaatcacggtaaggaacatgttcttgttgggggttgagga 48569866  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||  | || |  ||||||| | || || |||| |||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||    
T  48569867 tggtgggggagcgtggcagtggcgtcgccgtttatgggtgtgggaggaggacttggtagaggagtgtagggctttactactaacagtctctttgcaggaa 48569966  T
Q  305 tc 306  Q
    ||    
T  48569967 tc 48569968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 17097505 - 17097617
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||| ||||||| ||| |||||||||||  | ||||| || || || ||||||||||||||||||||||||||||    
T  17097505 agagatgggataggcgagggtggggaggggtggtttgtgtcgtgtgttaggagacgggtgggggacggagctgatactgatttttggcgtgattgttggt 17097604  T
Q  105 gtggagatgttcc 117  Q
    ||||  |||||||    
T  17097605 gtggtaatgttcc 17097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 15313094 - 15312981
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggag-gagagtgggagatggggcagatactgatttttggcgtgattgttgg 103  Q
    ||||||| |||||| |||||||| ||||||||||||| ||| |||||||||||  || ||||| ||||| || ||||||||||||||| ||||| |||||    
T  15313094 agagatgagataggcgagggtggggagggatggtttgcgtcgtgtgttaggagaaagggtgggggatggagccgatactgatttttggtgtgatagttgg 15312995  T
Q  104 tgtggagatgttcc 117  Q
    |||||  |||||||    
T  15312994 tgtggtaatgttcc 15312981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 16179459 - 16179346
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||| ||||||||| ||| |||||||| ||||| ||||| |||||  |  |||||||||||||||| ||| ||||||    
T  16179459 agagatgggataggcgagggtggggagagatggtttgtgtcgtgtgttagtaggagggtgggggatggatccaatactgatttttggcgcgatagttggt 16179360  T
Q  105 gtggagatgttcct 118  Q
     ||||  |||||||    
T  16179359 atggaattgttcct 16179346  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 12341883 - 12341986
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||     |||||||| |||||| ||||| ||||| || |||||  |||||||||| ||||||||||    
T  12341883 agagatgggataggtgagggtggggagggctggtttacaggttgtgttaagaggagggtgggggatggagctgataccaatttttggcgagattgttggt 12341982  T
Q  105 gtgg 108  Q
    ||||    
T  12341983 gtgg 12341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 3141363 - 3141066
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||  ||||||| |||||||  |   ||||||||||    |||||||| || || || ||||| |||||||||||||||||||    
T  3141363 agagatgggataggagagggcagagagggttggtttgcattgggtgttaggagacaggtgggagacggtgctgagactgagttttggcgtgattgttggt 3141264  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||| |||||||  ||||||| || ||||| || || ||||| ||| | ||  |  ||   ||| |||||||||| ||||||| | ||||  |||| ||    
T  3141263 gtggaaatgttccattttgtgtgcgatttagacggctctttgatttgacagtcaacaaagttgtcacagttaggaacatgttccagttgggtttggaggt 3141164  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
     || |||| | ||| |  ||||||| | || ||||| |  |||||||| ||||||||||||||||||||||   | ||||| |||||| ||||||||||    
T  3141163 tggtgggg-gatgtggcagtggcgttgccgcttgtgagtttgggaggaagagttggtagaggagtgtagggaactattacttacagttactttgcagga 3141066  T

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Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 303
Target Start/End: Original strand, 962794 - 963089
Alignment:
Q  8 gatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtg 107  Q
    ||||||||||  ||||| ||| |||| |||||||  ||  ||||||||||    |||||||| || || || ||||| | ||||||||||||||||||||    
T  962794 gatgggatagaagagggaggatagggttggtttgcatcaggtgttaggagacaggtgggagacggtgctgagactgactgttggcgtgattgttggtgtg 962893  T
Q  108 gagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtggg 207  Q
    || |||||||  ||||||| || ||||| || |||||||| ||| | ||  |  ||   ||| |  ||||||| ||||||| | ||||  |||| || ||    
T  962894 gaaatgttccgttttgtgtgcgatttagacggctttttgatttgacagtcaacaaagttgtcacgattaggaacatgttccagttgggtttggaggttgg 962993  T
Q  208 cggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
     |||| || || |  ||||||| | || |||||||  |||||||| || |||||||||||||||||||  || ||||| |||||| ||||||||||    
T  962994 tgggggggcgtggcagtggcgtcgccgcttgtgggtttgggaggaagaattggtagaggagtgtagggaattattacttacagttactttgcagga 963089  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 31547665 - 31547616
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgta 272  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  31547665 gtggcgtaggcggttgtgggcatgggaggaggagttgttaggggagtgta 31547616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 44888198 - 44888147
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  44888198 gtggcgtaggcggttgtgggcatgggaggaggaattgttaggggagtgtagg 44888147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 19890956 - 19890890
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaat 305  Q
    |||| ||||||||||||  ||||||| |||||| ||| ||| ||||||||||| |||||||||||||    
T  19890956 tgggtgtgggaggaggacctggtagaagagtgtggggatttattactaacagtctctttgcaggaat 19890890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 26846175 - 26846105
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || ||||||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  26846175 ggggaggcgtggaggtgggggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggcttt 26846105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 31675211 - 31675173
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31675211 ttgtgggtgtgggaggaggagttggtagaggagtgtagg 31675173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 31921209 - 31921247
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31921209 ttgtgggtgtgggaggaggagttggtagaggagtgtagg 31921247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 9510037 - 9509997
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  9510037 ggttgtgggcatgggaggaggagttggtagcggagtgtagg 9509997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 9518012 - 9517972
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  9518012 ggttgtgggcatgggaggaggagttggtagcggagtgtagg 9517972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 20531720 - 20531788
Alignment:
Q  47 tgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggagatgtt 115  Q
    ||||| |||||||| ||||| || ||||| || ||| ||||||||||||| ||||||||||| ||||||    
T  20531720 tgtgtcaggaggagggtgggggacggggctgaaacttatttttggcgtgactgttggtgtggtgatgtt 20531788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 14854196 - 14854146
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    |||||||||||||||||||| ||||||||||||  |  |||||||||||||    
T  14854196 gtggcgtaggcggttgtgggtgtgggaggaggatcttttagaggagtgtag 14854146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 26010327 - 26010285
Alignment:
Q  237 tgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||    
T  26010327 tgtgggcttgggaggaggaattggtagaggagtgtaggacttt 26010285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 47537576 - 47537506
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || || |||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  47537576 ggggaggcgtggaagtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggcttt 47537506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 17620333 - 17620293
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  17620333 ggttgtgggcgtgggagaaggagttggtagcagagtgtagg 17620293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 6051115 - 6050773
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6051115 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 6051016  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  6051015 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 6050916  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6050915 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 6050816  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  6050815 tcagtgttagacagatggctctggttacctaatcatgatgatg 6050773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 35541561 - 35541219
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35541561 agagatgggataggtgagggtggcgagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 35541462  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  35541461 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 35541362  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35541361 gggcggggaggcgttgaggtggcgtcggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttttttgcaggaa 35541262  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  35541261 tcagtgttagacagatggctctggttacctaatcatgatgatg 35541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 11908733 - 11909075
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  11908733 agagatgggataggtgagggtggagagggttggtttgggacatgtgttaggaggagggtgggagatggtgcagatactgatttttgacgtgattgttggt 11908832  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||| || |||||||||||||    
T  11908833 gtggagatgttcctttgtgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcatgatgggggtggatgt 11908932  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11908933 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 11909032  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  11909033 tcagtgatagacagatggctctggttacctaatcatgatgatg 11909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 47622705 - 47623006
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||   |||| ||| ||||| ||||||  |  ||||||||||||||| ||||| |||||  | ||||||||||||||||| ||||||||||    
T  47622705 agagatgggataaacgaggatggggagggttggttttcggattgtgttaggaggagggtgggggatggttccgatactgatttttggcgggattgttggt 47622804  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||| ||||||||  || |||  || ||||| || || | | | ||| | ||  |  ||  | || |  ||| || ||||||  || |||||||||| ||    
T  47622805 gtggtgatgttccgtttcgtgagcgctttagacggctatataatttggccgtcaacaaagtaatcacgattatgactatgtttttgttgggggtggaggt 47622904  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || || ||||||| |  ||||||| | ||||| |||||||||||||||||  ||||||||||||||| |||||| ||||| |||| || ||||||||||    
T  47622905 tggtggtgaggtgtggtagtggcgtcgtcggttatgggcgtgggaggaggacctggtagaggagtgtaaggctttattactgacagcttttttgcaggaa 47623004  T
Q  305 tc 306  Q
    ||    
T  47623005 tc 47623006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 43388877 - 43388774
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||| ||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||| ||||||||||||| ||||||||||    
T  43388877 agagatgggataggtgatggtggggagggctggtttacaagttgtgttaggaggagggtgggggatggagctgatgctgatttttggcgagattgttggt 43388778  T
Q  105 gtgg 108  Q
    ||||    
T  43388777 gtgg 43388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 22191627 - 22191678
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22191627 gtggcgtaggcggttgtgggcatgggaggaggagttggtaggggagtgtagg 22191678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 2491649 - 2491429
Alignment:
Q  80 actgatttttggcgtgattgttggtgtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttagga 179  Q
    ||||| || |||||||||||||||||||||||||||||  ||||||| || ||||| ||  ||||||  ||| | ||| |  ||   ||| | ||||||     
T  2491649 actgacttctggcgtgattgttggtgtggagatgttccgttttgtgtgcgatttagacggttttttgttttgacagttaacaaagttgtcacggttaggt 2491550  T
Q  180 atatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||| | |||| ||||| |  || |||| || || |  ||||||| | || |||||||| |||||||| ||||||||||||||||||||||   |    
T  2491549 atatgttccagttgggtgtggaggctggtgggggggcgtggcagtggcgtcgtcgtttgtgggcttgggaggaagagttggtagaggagtgtagggtact 2491450  T
Q  280 gttactaacagtttctttgca 300  Q
     ||||| |||||| |||||||    
T  2491449 attacttacagttactttgca 2491429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 347
Target Start/End: Complemental strand, 51052698 - 51052650
Alignment:
Q  299 caggaatcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  51052698 caggaatcagtgatagacagatggctctggttacctaatcatgatgatg 51052650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 3074043 - 3073993
Alignment:
Q  224 tggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  3074043 tggcgtaggcggttgtgggcctgggaggaggagttgttaggggagtgtagg 3073993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 21405132 - 21405081
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||| || |||||||||||| ||| ||||||||||    
T  21405132 gtggcgtaggcggttgtgggcatgagaggaggagttgttaggggagtgtagg 21405081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 52691755 - 52691715
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  52691755 ggttatgggcgtgggaggaggagttggtggaggagtgtagg 52691715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 25504852 - 25504895
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  25504852 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 25504895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 3544960 - 3544998
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  3544960 ttgtgggtgtgggaggaggagttggtagaagagtgtagg 3544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 20987455 - 20987417
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  20987455 ttgtgggcgtgggaggaggagttggtggtggagtgtagg 20987417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 26805242 - 26805204
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  26805242 ttgtgggcgtgggaggaggacatggtagaggagtgtagg 26805204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 28358187 - 28358133
Alignment:
Q  220 gaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||  | |||||||||||||| || ||| |||||||||||||||||    
T  28358187 gaggtggcgtagaagattgtgggcgtgggaagaagagatggtagaggagtgtagg 28358133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 30110757 - 30110826
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctt 278  Q
    ||||||| || || |||| | ||| |||||||||| ||||||||||||  | ||||||||||||||||||    
T  30110757 ggggaggcgtggaagtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctt 30110826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 48265575 - 48265620
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||  |||||||||||||||| ||| |||||||||||||||    
T  48265575 ggttgtggcagtgggaggaggagttgttagcggagtgtagggcttt 48265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 30970467 - 30970507
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggc 276  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  30970467 ttgtgggcgtgggaggaggagatggtggcggagtgtagggc 30970507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 52470039 - 52470079
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  52470039 ggttgtgggcgtgggaggaggagaaggtagtggagtgtagg 52470079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 42514232 - 42513890
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42514232 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttctggcgtgattgttggt 42514133  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||| ||||||||||||||    
T  42514132 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttccttctgggggtggatgt 42514033  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42514032 ggggggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggac 42513933  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  42513932 tcagtgttagacagatggctctggttacctaatcatgatgatg 42513890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 30731942 - 30732284
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  30731942 agagatgggataggtgagggtggagagggttggtttgggacatgtgttaggaggagggtgggagatggtgcagatactgatttttggcgtgattgttggt 30732041  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||  ||||| |||||||||||||||||||||||||||||||||||||    
T  30732042 gtggagatgttcctctgtgtgtccggtttagacgcctttttgacttgactgctcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 30732141  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30732142 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 30732241  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  30732242 tcagtgatagacagatggctctggttacctaatcatgatgatg 30732284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 12825711 - 12825369
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||     
T  12825711 agagatgggataggtgagggtggagagggttggtttgggacatgtgttaggaggagggtgggagatggtgcagatactgatttttggcgtgattgttgga 12825612  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  12825611 gtggagatgttcctttgtgtgtccggtttaggcgcctttttgacttgactgttcacaaatcaatctcagttaggaatatgttcctgctgggggtggatgt 12825512  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12825511 gggcggggaggcgttgaggtggcgtaggcggttgtgggcttgggatgaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 12825412  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  12825411 tcagtgatagacagatggctctggttacctaatcatgatgatg 12825369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 5 - 347
Target Start/End: Original strand, 27116801 - 27117131
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||             
T  27116801 agagatgggataggtgagggtggagggggatggtttgggtcttgtgttaggaggagggtgggagatggtgtagatactgatttttggcgtg--------- 27116891  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
       ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27116892 ---gagatgttcctttgtgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 27116988  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27116989 gggcggagaggcgttgaggtggcgtaggcggttgtgggcctgggaggaggggttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 27117088  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27117089 tcagtgatagacagatggctatggttacctaataatgatgatg 27117131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 23238895 - 23238554
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  | ||||| ||||||||||||||| ||||||    
T  23238895 agagatgggataggtgagggtggagaggggtggtttgggtcttgtgttaggaggagggtgggagatggtacggataccgatttttggcgtgatcgttggt 23238796  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||||||||| || |||| ||||||| |||| ||||||||||||  ||| ||  ||||| |||| ||||||||||||||| || |  |||||||| |    
T  23238795 gcggagatgttccactgtgtgcccggtttgggcgtctttttgacttgagtgtacacaaatcaatctccgttaggaatatgttcttg-ttagggtggattt 23238697  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  23238696 gggtggggaggcgttgcggtggcgtaggaggttgtgggccagggaggaggagttggtagaggagtgtagggctttattgctaacagtttctttgcaggaa 23238597  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||| |||||||||||| ||| |||||||| |||||||||    
T  23238596 tcagtgacagacagatggctttgggtacctaatcatgatgatg 23238554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 31642023 - 31641695
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| ||||||||||    
T  31642023 agagatgggataggtgagggtggagagggttggtttgggtcttgtgttaggaggagggtgggagacggtgcagatacagatttttggcgggattgttggt 31641924  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||| |||||||| | |||| ||||||||| ||||||| ||||||| ||||  |  || || |||| |||||||| |||||| || |||||||||| ||    
T  31641923 gtggaaatgttcctttgtgtgaccggtttagtcgcctttatgacttgactgtgaacaaaccaatctctgttaggaacatgttcttgatgggggtggaggt 31641824  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  31641823 cggtggggaggcgttgaggtggcgtaggcggttgtgggcttgggaggaagagttggtagaggagtttagggctttattactaacagtttcattgcaggaa 31641724  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| |||||| | ||||||||    
T  31641723 tcagtgacagatagatggatttggttacc 31641695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 28535303 - 28535631
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | ||| || ||||||||||| ||||||||||    
T  28535303 agagatgggataggtgagggtggagagggttggtttgggtcttgtgttaggaggagggtgggagacggtgtagaaacagatttttggcgggattgttggt 28535402  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatc-agtctcagttaggaatatgttcctgctgggggtggatg 203  Q
    |||||||||||||| | |||| ||| ||||| ||||||| ||||||| ||||  | ||||| | |||| ||||||||||||||| || ||||||||||||    
T  28535403 gtggagatgttcctttgtgtgaccgttttagtcgcctttatgacttgactgtgaa-caatccaatctctgttaggaatatgttcttgttgggggtggatg 28535501  T
Q  204 tgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    | || ||||||| |||||||||||||||| |||||||||| || ||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  28535502 tcggtggggaggcgttgaggtggcgtaggtggttgtgggcttgagaggaagagttggtagaggagtttagggctttattactaacagtttcattgcagga 28535601  T
Q  304 atcagtgatagacagatggctatggttacc 333  Q
    |||| ||| ||| |||||||| ||||||||    
T  28535602 atcaatgacagatagatggctttggttacc 28535631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 35983419 - 35983747
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| || ||||| || |||||||||||||||||| |||    
T  35983419 agagatgggataggtgacggtggagagggttggtttggatcttgtgttaggaggagggtgggagacggtgcagaaacggatttttggcgtgattgtaggt 35983518  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||||||||||||| | |||| ||| ||||| ||||| | ||||||| ||||  |  || || |||| ||||||||||||||| || ||||||||||||     
T  35983519 gtggagatgttcctatgtgtgaccgttttagtcgcctatatgacttgactgtgaacaaaccaatctctgttaggaatatgttcttgttgggggtggatga 35983618  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||    
T  35983619 gggtggggaggcgttgaggtggcgtaggcggttgtgggcttaggaggaggagttggtagaggagtttagggctttattactaacagtttcattacaggaa 35983718  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| |||| ||| ||||||||    
T  35983719 tcagtgacagatagatagctttggttacc 35983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 42928643 - 42928315
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||| ||||| || || || || || ||||||| ||||||||||||||    
T  42928643 agagatgggataggtgagggtggagagggctggtttggggcgtgttttaggaggagggtgggtgacggtgctgaaacagatttttagcgtgattgttggt 42928544  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | || ||||||||    |||| ||| ||||| ||||| | ||||||| ||||| || ||||| || ||||||||||||||||| || ||| || ||||||    
T  42928543 gcggtgatgttccgaggtgtgaccgttttagtcgcctatatgacttggctgttaataaatcaatcacagttaggaatatgttcttgttggaggcggatgt 42928444  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| ||||  ||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| || |||| ||| ||||||    
T  42928443 gggtggggaggcgttgcagtggcgtcggcggttgtgggcttgggaggaagagttggtagaggagtgtagggttttattacttaccgtttttttacaggaa 42928344  T
Q  305 tcagtgatagacagatggctatggttacc 333  Q
    ||||||| ||| |||||| | ||||||||    
T  42928343 tcagtgacagatagatggttgtggttacc 42928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 306
Target Start/End: Complemental strand, 27795996 - 27795694
Alignment:
Q  5 agagatgggatag-gtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttgg 103  Q
    ||||||||||||| | |||||||||||||| ||||||| |  ||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||    
T  27795996 agagatgggatagcgcgagggtggagagggttggtttgtggattgtgttaggaggagggtgggggatggagctgatactgatttttggcgagattgttgg 27795897  T
Q  104 tgtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatg 203  Q
    |||||   ||||||  | ||||  || |||||||| |||| ||||||  || | ||| ||||| || | |  ||||| |||||| || | |||||||| |    
T  27795896 tgtggtagtgttccgttgtgtgagcgctttaggcgtctttatgacttagctatccataaatcaatcacggcgaggaacatgttcttgttaggggtggagg 27795797  T
Q  204 tgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
      || ||||  | || |  ||||||| | || || |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  27795796 atggtgggggagcgtggcagtggcgtcgccgattatgggtgtgggaggaggacttggtagaggagtgtagggctttattactaacagtttctttggagga 27795697  T
Q  304 atc 306  Q
    |||    
T  27795696 atc 27795694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 10777296 - 10777193
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||| |||||||||| ||||| |||||||    ||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||    
T  10777296 agagatgggatatgtgagggtggggagggctggtttgcaggttgtgttaggaggagggtgggggatggagccgatactgatttttggcgagattgttggt 10777197  T
Q  105 gtgg 108  Q
    ||||    
T  10777196 gtgg 10777193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 25857052 - 25857155
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||||||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||    
T  25857052 agagatgggataggtgagggtggggagggatggttttcaggttgtgttaggaggagggtgggggatggagctgataccgatttttggcgcgattgttggt 25857151  T
Q  105 gtgg 108  Q
    ||||    
T  25857152 gtgg 25857155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 8299812 - 8299913
Alignment:
Q  7 agatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgt 106  Q
    ||||||||||||||||||||| ||||||||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||    
T  8299812 agatgggataggtgagggtggggagggatggttttcaggttgtgttaggaggagggtgggggatggagctgataccgatttttggcgcgattgttggtgt 8299911  T
Q  107 gg 108  Q
    ||    
T  8299912 gg 8299913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 33170167 - 33169872
Alignment:
Q  8 gatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtg 107  Q
    ||||||||||  |||||  ||||||| |||||||  ||  ||||||||||    |||||||| || || || ||||| ||||||||||||||||||||||    
T  33170167 gatgggatagaagagggatgagagggttggtttgcatcaggtgttaggagacaggtgggagacggtgctgagactgacttttggcgtgattgttggtgtg 33170068  T
Q  108 gagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtggg 207  Q
    || |||||||  ||||||| || ||||| || |||||||| ||| | ||  |  ||   ||| | |||||||| ||||||| | ||||  |||| || ||    
T  33170067 gaaatgttccgttttgtgtgcgatttagacggctttttgatttgacagtcaacaaagttgtcacggttaggaacatgttccagttgggtttggaggttgg 33169968  T
Q  208 cggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
     |||| || || |  ||||||  | || |||||||  |||||||| ||||||||||||||||||||||  || ||||| |||||| ||||||||||    
T  33169967 tgggggggcgtggcagtggcgacgccgcttgtgggtttgggaggacgagttggtagaggagtgtagggaattattacttacagttactttgcagga 33169872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 24408222 - 24408142
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    ||||||| | || |||||||| |||||||| ||||||||||||||||||||||   | ||||| |||||| ||||||||||    
T  24408222 gtggcgtcgtcgcttgtgggcttgggaggaagagttggtagaggagtgtagggaactattacttacagttactttgcagga 24408142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 18089392 - 18089494
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||| |||| |||||||| ||||| ||||||| ||| ||||||||| |    ||||| ||||| ||  |||||||||||||||||||||||| ||    
T  18089392 agagatgggttaggcgagggtgg-gaggggtggtttgtgtcgtgtgttaggcgtcaggtgggtgatggagcttatactgatttttggcgtgattgttagt 18089490  T
Q  105 gtgg 108  Q
    ||||    
T  18089491 gtgg 18089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 23878398 - 23878445
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtg 270  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||    
T  23878398 gtggcgtaggaggttgtgggcgtgggaggaggatttggtagtggagtg 23878445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 476494 - 476456
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  476494 ttgtgggtgtgggaggaggagttggtagaggagtgtagg 476456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 20208551 - 20208621
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || ||||||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  20208551 ggggaggcgtggaggtggaggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggcttt 20208621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 380182 - 380145
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    |||||||||||||||||||||||||| |||||||||||    
T  380182 ttgtgggcgtgggaggaggagttggtcgaggagtgtag 380145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 11574553 - 11574594
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  11574553 ttgtgggcgtgggaggaggagatgttagaggagtgtagggct 11574594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 22095109 - 22095150
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  22095109 ttgtgggcgtgggaggaggagttgttagaggagtttagggct 22095150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 18089617 - 18089687
Alignment:
Q  233 cggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||| | | ||||| |||||| | ||||||||    
T  18089617 cggttgtgggcttgggaggaaaagttgatagaggagtgtagggatcttttacttacagttacattgcagga 18089687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 16907567 - 16907530
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  16907567 ttgtgggcgtgggaggaggagttgatagtggagtgtag 16907530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 347
Target Start/End: Complemental strand, 3764 - 3422
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||    
T  3764 agagatgggataggtgagggtggagaggggtggtttgggtcctgcgttaggaggagggtgggagatggtgcggataccgatttttggcgtgattgttggt 3665  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    | ||||| ||||| || |||| ||||||| |||| ||||||||||||  ||| ||  ||||  |||| ||||||||||||||| || |||||||||||||    
T  3664 gcggagacgttccactgtgtgcccggtttgggcgtctttttgacttgagtgtacacaaatctatctccgttaggaatatgttcttgttgggggtggatgt 3565  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| ||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3564 gggtggggaggcgttgcggtggcgtaggaggttgtgggcctgggaggaggagttggtagaggagtgtagggctttattactaacagtttctttacaggaa 3465  T
Q  305 tcagtgatagacagatggctatggttacctaataatgatgatg 347  Q
    ||||||| |||||||||||| ||| |||||||  |||||||||    
T  3464 tcagtgacagacagatggctttgggtacctaaccatgatgatg 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 111 - 344
Target Start/End: Complemental strand, 2554043 - 2553810
Alignment:
Q  111 atgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcgg 210  Q
    ||||||| || |||| ||| |||||||||||||||||||||  ||||||  ||||| ||| |||||||||||||||| || |||||||||| ||||| ||    
T  2554043 atgttccactatgtgcccgatttaggcgcctttttgacttgaatgttcacaaatcaatcttagttaggaatatgttcttgttgggggtggacgtgggtgg 2553944  T
Q  211 ggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtg 310  Q
    ||| | |||| |||||||||||||||||||||| |||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2553943 ggaagcgttgcggtggcgtaggcggttgtgggcttgggagtagaagttggtaaaggagtgtagggctttattactaacagtttctttgcaggaatcagtg 2553844  T
Q  311 atagacagatggctatggttacctaataatgatg 344  Q
    | |||||||||||| || ||||||||| ||||||    
T  2553843 acagacagatggctttgattacctaatcatgatg 2553810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 141 - 344
Target Start/End: Complemental strand, 21168574 - 21168372
Alignment:
Q  141 tttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtg 240  Q
    |||||||||||  ||||||  ||||| |||| ||||||||||||||| || | ||| | || ||||| ||||||| |||| |||||||||||||||||||    
T  21168574 tttttgacttgaatgttcacaaatcaatctctgttaggaatatgttcttgttaggg-tagacgtgggaggggaggcgttgcggtggcgtaggcggttgtg 21168476  T
Q  241 ggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacctaataat 340  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||    
T  21168475 ggcttgggaggaggagttggtagaggagtgtagggctttattactaacagtttctttgcaggaatcagtgacagacagatggctttggttacctaatcat 21168376  T
Q  341 gatg 344  Q
    ||||    
T  21168375 gatg 21168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 24767060 - 24767346
Alignment:
Q  8 gatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtg 107  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||||||| ||||| || || ||  | |  ||||||||||||||| ||||||| |    
T  24767060 gatgggatatgtgagggtggagagggctggtttggggcgtgtgttaggaggagggtgggtgacggtgctaaaatagatttttggcgtgatcgttggtgcg 24767159  T
Q  108 gagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtggg 207  Q
    | |||||||| || |||| ||| ||||| ||||| | ||||||| ||||| |  ||||| || ||||||||||||||||| || |||| ||||| |||||    
T  24767160 gtgatgttccactgtgtgaccgttttagtcgcctatatgacttggctgttaacaaatcaatcacagttaggaatatgttcttgttgggcgtggacgtggg 24767259  T
Q  208 cggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttc 294  Q
     ||||||| |||| |||||||| | ||||||||||| |||||||| |||||||||||||||||||||| | | ||||||||||||||    
T  24767260 tggggaggcgttgcggtggcgtcgacggttgtgggcttgggaggaagagttggtagaggagtgtagggttgtattactaacagtttc 24767346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 2554118 - 2554045
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcaga 78  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  2554118 agagatgggataggtgagggtggagagggatggtttgggacttgtgttaggaggagggtgggagatggtgcaga 2554045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 307
Target Start/End: Original strand, 15958482 - 15958743
Alignment:
Q  46 ttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggagatgttcctctttgtgtccggtttaggcgccttttt 145  Q
    ||||||||||||||| ||||| |||||  | || |||||||||||||||||||||||||||||  |||||||  ||||||  |  ||||| || || | |    
T  15958482 ttgtgttaggaggagggtgggggatggatccgaaactgatttttggcgtgattgttggtgtggtaatgttccgttttgtgagctctttagtcggctatat 15958581  T
Q  146 gacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgt 245  Q
    || ||| ||||  |  ||  | || |||||||| |||||||| |||||| ||||||||| || ||||||| || |  || |||| | || || |||||||    
T  15958582 gatttggctgtcaacaaagtaatcacagttaggcatatgttcttgctggaggtggatgttggtggggaggcgtggcagttgcgtcgtcgtttatgggcgt 15958681  T
Q  246 gggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatca 307  Q
    || ||||  | ||| ||||||| ||||||| ||| ||||| |||||||||||||||||||||    
T  15958682 ggtaggaaaacttgttagaggaatgtagggttttattactgacagtttctttgcaggaatca 15958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 17573284 - 17573387
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||    
T  17573284 agagatgggataggtgagggtggggagggctggttttcaggttgtgttaggaggagggtgggggatggagctgataccgatttttggcgcgattgttggt 17573383  T
Q  105 gtgg 108  Q
    ||||    
T  17573384 gtgg 17573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 17605962 - 17606065
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||    
T  17605962 agagatgggataggtgagggtggggagggctggtttacaggttgtgttaggaggagggtgggggatggagctgataccgatttttggcgagattgttggt 17606061  T
Q  105 gtgg 108  Q
    ||||    
T  17606062 gtgg 17606065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 14372619 - 14372920
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||| ||||||| ||||||||| ||||| ||||||  |  |||||| |||||||| ||||| |||||  | ||||||||||||||||| ||||||||||    
T  14372619 agagacgggatagatgagggtggggagggttggttttcgggttgtgtcaggaggagggtgggggatggttccgatactgatttttggcgggattgttggt 14372718  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||  |||||||  || |||  |  ||||| ||  | | ||| ||| | ||  |  ||  | || | ||||| ||||||||  |  |||||||||| ||    
T  14372719 gtggtaatgttccgtttcgtgagcactttagacggttatatgatttggccgtcaacaaagtaatcacggttagaaatatgtttttattgggggtggaggt 14372818  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || || |||| || || |||||||   ||||| ||||||||||| |||||  | |||||||||||||||||||| ||||| ||||||||||||||||||    
T  14372819 tggtggtgaggcgtggaagtggcgtcatcggttatgggcgtgggacgaggacctagtagaggagtgtagggctttattactgacagtttctttgcaggaa 14372918  T
Q  305 tc 306  Q
    ||    
T  14372919 tc 14372920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 10576878 - 10576981
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    ||||||||||||||||||||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||||| ||||||||| | ||||||||||    
T  10576878 agagatgggataggtgagggtggggagggctggtttataggttgtgttaggaggagggtgggggatggagctgataccgatttttggtgagattgttggt 10576977  T
Q  105 gtgg 108  Q
    ||||    
T  10576978 gtgg 10576981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 13938231 - 13938101
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagag-tgggagatggggcagatactgatttttggcgtgattgttgg 103  Q
    |||||||||||||| ||||| |||||||| |||||||  ||  |||||||||| |||| |||||||||| || || ||||| ||||| ||||||||||||    
T  13938231 agagatgggataggagagggaggagagggttggtttgcatcaggtgttaggag-agaggtgggagatggtgctgagactgacttttgtcgtgattgttgg 13938133  T
Q  104 tgtggagatgttcctctttgtgtccggtttag 135  Q
    |||||| |||||||  ||||||| || |||||    
T  13938132 tgtggaaatgttccgttttgtgtgcgatttag 13938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 20882661 - 20882764
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||| |||||||  | ||||||||||||||| ||||| ||||| || || ||  |||||||||| ||||||||||    
T  20882661 agagatgggataggcgagggtggggagggttggtttgcatgttgtgttaggaggagggtgggggatggagccgaaaccaatttttggcgagattgttggt 20882760  T
Q  105 gtgg 108  Q
    ||||    
T  20882761 gtgg 20882764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 33185929 - 33185834
Alignment:
Q  23 ggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggagatgttcct 118  Q
    ||||| ||||| |||||||  |||| |||  ||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  33185929 ggtggtgaggggtggtttgtatcttatgtctggaggagggtgggggatggggctgaaactgatttttggcgtgattgttggtgtggtgatgttcct 33185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 21629735 - 21629838
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||| |||||||||| ||||| ||||||     ||||||||||||||| ||||| ||||| || ||||  ||||||||||| ||||||||||    
T  21629735 agagatgggataagtgagggtggggagggctggttttcaggttgtgttaggaggagggtgggggatggagctgatatcgatttttggcgagattgttggt 21629834  T
Q  105 gtgg 108  Q
    ||||    
T  21629835 gtgg 21629838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 20882895 - 20882989
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacc 333  Q
    |||||||||||||||||  ||||||| | |||||||| ||| ||||||||||| ||||||||||||||||  | |||||| ||| | ||||||||    
T  20882895 tgggcgtgggaggaggacctggtagaagggtgtagggatttattactaacagtctctttgcaggaatcagaaacagacaggtggttgtggttacc 20882989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 13937994 - 13937914
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagga 303  Q
    ||||||| | || |||||||  |||||||| ||||||||||||||||||||||  || ||||| |||||| ||||||||||    
T  13937994 gtggcgtcgccgcttgtgggtttgggaggaagagttggtagaggagtgtagggaattattacttacagttactttgcagga 13937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 26514007 - 26513967
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  26514007 ggttgtgggcttgggaggaggagttggtagaggagtgtagg 26513967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 298
Target Start/End: Complemental strand, 5041823 - 5041737
Alignment:
Q  212 gaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttg 298  Q
    ||||||| |||||||||| |  | ||||||| ||||||||| |||||| |||||||||||||||| ||  |||| ||| ||||||||    
T  5041823 gaggtgtggaggtggcgtcgtggtttgtgggtgtgggaggaagagttgttagaggagtgtagggcattactactgacaatttctttg 5041737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 29055813 - 29055763
Alignment:
Q  224 tggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||||||||    
T  29055813 tggcgtaggcggttgtgggtctaggaggaggagttggtaggggagtgtagg 29055763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 5085885 - 5085926
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  5085885 ttgtgggcgtgggaggaggagatgttagaggagtgtagggct 5085926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 23065903 - 23065947
Alignment:
Q  233 cggttgtgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  23065903 cggttgtgggcgtgggaggaggatttgctagaggagtgtaaggct 23065947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 25350506 - 25350466
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  25350506 ggttatgggcgtgggaggaggagttggtggaggagtgtagg 25350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 11462664 - 11462617
Alignment:
Q  260 gtagaggagtgtagggctttgttactaacagtttctttgcaggaatca 307  Q
    ||||| |||||||||| ||| ||||||||||| |||||||||||||||    
T  11462664 gtagaagagtgtagggatttattactaacagtctctttgcaggaatca 11462617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 302
Target Start/End: Original strand, 17111001 - 17111064
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagg 302  Q
    |||||||||||||||||| ||||||||||||||| | |||| ||| | || ||||| |||||||    
T  17111001 tgggcgtgggaggaggagctggtagaggagtgtaagactttattattgactgtttcgttgcagg 17111064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 19255921 - 19255878
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  19255921 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 19255878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 25318127 - 25318092
Alignment:
Q  244 gtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  25318127 gtgggaggaggagttgctagaggagtgtagggcttt 25318092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 26205621 - 26205586
Alignment:
Q  244 gtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  26205621 gtgggaggaggagttgctagaggagtgtagggcttt 26205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 33640199 - 33640156
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||||||||||||||||| || ||| |||||||||||||||    
T  33640199 ttgtgggcgtgggaggaggagatgttagtggagtgtagggcttt 33640156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 649898 - 649968
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || || |||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  649898 ggggaggcgtggaagtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggcttt 649968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 333532 - 333577
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||| ||||| ||||||||| |||||||||||||| ||||    
T  333532 ggttgtgggcatgggatgaggagttgttagaggagtgtaggacttt 333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 18051306 - 18051351
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||| ||||||||||||  | |||||||||||||||||||    
T  18051306 ggttgtgggcttgggaggaggaggagttagaggagtgtagggcttt 18051351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 18682402 - 18682455
Alignment:
Q  245 tgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttg 298  Q
    |||||||| ||||||| |||||||||||||||| | ||||| |||||| |||||    
T  18682402 tgggaggaagagttggcagaggagtgtagggctctattactcacagttactttg 18682455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 21629975 - 21630060
Alignment:
Q  245 tgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggtt 330  Q
    ||||||||||| ||| |||  |||||||||| ||| ||||| |||||| ||||||||||| |||  | |||||| ||| |||||||    
T  21629975 tgggaggaggaattgttagtagagtgtagggatttattactgacagttactttgcaggaaacagaaacagacaggtggatatggtt 21630060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 900711 - 900751
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||| |||||| ||| ||||||||||    
T  900711 ggttgtgggcgtgggaggatgagttgttagcggagtgtagg 900751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 7956514 - 7956546
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggagga 255  Q
    |||||||||||||||||||| ||||||||||||    
T  7956514 gtggcgtaggcggttgtgggtgtgggaggagga 7956546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 34180215 - 34180175
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  34180215 ggttgtgggcgtgggaggaggagatagtagtggagtgtagg 34180175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 171 - 333
Target Start/End: Complemental strand, 41207362 - 41207200
Alignment:
Q  171 cagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtg 270  Q
    ||||||||||||||||| || |||||||||||||||| ||||||| ||||   |||||| | ||||||||||| |||||||| |||||||||||||||||    
T  41207362 cagttaggaatatgttcttgttgggggtggatgtgggtggggaggcgttgcaatggcgtcgtcggttgtgggcatgggaggaagagttggtagaggagtg 41207263  T
Q  271 tagggctttgttactaacagtttctttgcaggaatcagtgatagacagatggctatggttacc 333  Q
    ||||| ||| ||| | |||||||| |||||||||||||||  ||| |||||| | ||||||||    
T  41207262 tagggttttattatttacagtttccttgcaggaatcagtggcagatagatggttgtggttacc 41207200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 306
Target Start/End: Complemental strand, 40177139 - 40176879
Alignment:
Q  46 ttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggagatgttcctctttgtgtccggtttaggcgccttttt 145  Q
    ||||||||||||||| ||||| ||||| |  ||||| ||||||||| | ||||||||||||||   ||||||  | ||||  || |||||||| |||| |    
T  40177139 ttgtgttaggaggagggtgggggatggagttgataccgatttttggtgagattgttggtgtggtagtgttccgttgtgtgaacgctttaggcgactttat 40177040  T
Q  146 gacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgtgggcggggaggtgttgaggtggcgtaggcggttgtgggcgt 245  Q
    |||||  |  |  || ||||| || | || ||||| |||||| || |||||||||| |  || ||||  | || |  ||||||| | ||||| |||| ||    
T  40177039 gacttagccatcaataaatcaatcacggtgaggaagatgttcttgttgggggtggaggatggtgggggagcgtggcagtggcgtcgccggttatgggtgt 40176940  T
Q  246 gggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaatc 306  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40176939 gggaggaggacttggtagaggagtgtagggctttattactaacagtctctttgcaggaatc 40176879  T

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Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 12646048 - 12645749
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||  ||||||| |  ||||||||||||||| ||||||||||| ||    || ||||||||||| ||||||||||    
T  12646048 agagatgggataggcgagggtggggaggattggtttgcggattgtgttaggaggagggtgggagatggagccacaacagatttttggcgagattgttggt 12645949  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    ||||   ||||||| | ||||  || |||||||| || | ||||||  ||||  || ||  | || |||| ||||| |||||| || |||||||||| |     
T  12645948 gtggtagtgttcctttgtgtgagcgctttaggcgactatatgacttagctgtcaataaagtaatcacagtaaggaacatgttcttgttgggggtggagga 12645849  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    ||| || |  | || |  ||||||  | || || |||| |||| ||||||| ||||||||||||||||||| ||| ||||||||| | ||||||||||||    
T  12645848 gggtggaggagcgtggcagtggcgacgtcgtttatgggtgtggaaggaggatttggtagaggagtgtagggatttattactaacaatctctttgcaggaa 12645749  T

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Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 306
Target Start/End: Complemental strand, 28253232 - 28252931
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||  |||||||| ||||| ||||||  |  ||||||||||||||| ||||| |||||  | ||||||||||||||||| |||||| |||    
T  28253232 agagatgggatagacgagggtggggagggttggttttcggtttgtgttaggaggagggtgggggatggttccgatactgatttttggcgggattgtcggt 28253133  T
Q  105 gtggagatgttcctctttgtgtccggtttaggcgcctttttgacttgtctgttcatcaatcagtctcagttaggaatatgttcctgctgggggtggatgt 204  Q
    |||| |||||||   || |||  || ||||| || || | ||| ||| | ||  |  ||  | || | ||||||| ||||||  || |||||||||| ||    
T  28253132 gtggtgatgttctgtttcgtgagcgctttagacggctatatgatttggccgtcaacaaagtaatcacggttaggactatgtttttgttgggggtggaggt 28253033  T
Q  205 gggcggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
     || || |||| || |  ||||||| | ||||| ||||| |||||||| ||  | |||||||||||||||||||| ||||| ||||||| ||||||||||    
T  28253032 tggtggtgaggcgtggtagtggcgtcgtcggttatgggcatgggaggatgacctagtagaggagtgtagggctttattactgacagtttttttgcaggaa 28252933  T
Q  305 tc 306  Q
    ||    
T  28252932 tc 28252931  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 36804195 - 36804150
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  36804195 ggttgtgggcgtgggaggaggacttgttagaggagtgtagggcttt 36804150  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 12807996 - 12808044
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgt 271  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  12807996 gtggtgtaggaggttgtgggcgtgggaggaggcgttggtagaggagtgt 12808044  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 18844490 - 18844530
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  18844490 ggttgtgggcgtgggaggaggagttggtggaggagtgtagg 18844530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 16315622 - 16315672
Alignment:
Q  224 tggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||||  |||||||||||||||||||||  ||||||||||||||||||    
T  16315622 tggcgtagtaggttgtgggcgtgggaggaggccttggtagaggagtgtagg 16315672  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 36804410 - 36804365
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||    
T  36804410 ggttgtaggcgtgggaggaggacttgttagaggagtgtagggcttt 36804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 38604241 - 38604306
Alignment:
Q  239 tgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcaggaa 304  Q
    |||| ||||||||| || ||||||||||||||||||  |||  |||| ||||||||||||||||||    
T  38604241 tgggtgtgggaggaagacttggtagaggagtgtaggaatttagtacttacagtttctttgcaggaa 38604306  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 14440256 - 14440155
Alignment:
Q  5 agagatgggataggtgagggtggagagggatggtttgggtcttgtgttaggaggagagtgggagatggggcagatactgatttttggcgtgattgttggt 104  Q
    |||||||||||||| |||||||| ||||| |||||||    ||||||  ||||||| ||| | ||||| || ||||| ||| ||||||| ||||||||||    
T  14440256 agagatgggataggcgagggtggggagggctggtttgcaggttgtgt--ggaggagggtgagggatggagccgataccgatatttggcgagattgttggt 14440159  T
Q  105 gtgg 108  Q
    ||||    
T  14440158 gtgg 14440155  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 18489091 - 18489051
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  18489091 ggttgtgggcgtgggaggaggaattagtagaggagtgtagg 18489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 31093536 - 31093468
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttactaacagtttctttgcagg 302  Q
    |||| |||||||||||||| ||||| ||||||||||||||| ||||  |||| || ||||| |||||||    
T  31093536 ggttatgggcgtgggaggatgagttagtagaggagtgtaggactttactactgactgtttcattgcagg 31093468  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 22052900 - 22052865
Alignment:
Q  244 gtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  22052900 gtgggaggaggagttgctagaggagtgtagggcttt 22052865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 32991328 - 32991379
Alignment:
Q  223 gtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||| ||| | ||||||| ||||||||||| |||||||||||||||||||    
T  32991328 gtggcgaaggggattgtgggtgtgggaggaggcgttggtagaggagtgtagg 32991379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 44547706 - 44547756
Alignment:
Q  235 gttgtgggcgtgggaggaggagttggtagaggagtgtagggctttgttact 285  Q
    ||||| ||| |||||||||||||||||||||||||||| | |||| |||||    
T  44547706 gttgttggcatgggaggaggagttggtagaggagtgtatgactttattact 44547756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 7300956 - 7300919
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtag 273  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  7300956 ttgtgggtgtgggaggaggagatggtagaggagtgtag 7300919  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 15017957 - 15017916
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagggct 277  Q
    ||||||| ||||||||||||| || |||||||||||||||||    
T  15017957 ttgtgggtgtgggaggaggagatgttagaggagtgtagggct 15017916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 21517685 - 21517725
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  21517685 ggttgtgggcgtgggaggaggagttgttagtagagtgtagg 21517725  T

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Target: scaffold0555 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 7949 - 7911
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  7949 ttgtgggtgtgggaggaggagttggtagaggagtgtagg 7911  T

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Target: scaffold0179 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 7836 - 7766
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || ||||||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  7836 ggggaggcgtggaggtggaggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggcttt 7766  T

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Target: scaffold0179; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 12770 - 12700
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || ||||||| | ||| |||||||||| ||||||||||||  | |||||||||||||||||||    
T  12770 ggggaggcgtggaggtggtggaggaggttgtgggcatgggaggaggaggagttagaggagtgtagggcttt 12700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 15482 - 15552
Alignment:
Q  209 ggggaggtgttgaggtggcgtaggcggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    ||||||| || |||||||||| |  | ||||||||||||||||||||  || |||||||||||||||||||    
T  15482 ggggaggggtggaggtggcgtcgcagattgtgggcgtgggaggaggatatgttagaggagtgtagggcttt 15552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 34468 - 34506
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  34468 ttgtgggtgtgggaggaggagttggtagaggagtgtagg 34506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 6369 - 6331
Alignment:
Q  236 ttgtgggcgtgggaggaggagttggtagaggagtgtagg 274  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  6369 ttgtgggtgtgggaggaggagttggtagaggagtatagg 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 182412 - 182367
Alignment:
Q  234 ggttgtgggcgtgggaggaggagttggtagaggagtgtagggcttt 279  Q
    |||||||||| ||||||||||||  | |||||||||||||||||||    
T  182412 ggttgtgggcttgggaggaggaggagttagaggagtgtagggcttt 182367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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