View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0689_low_17 (Length: 343)
Name: NF0689_low_17
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0689_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 7e-80; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 3148302 - 3148468
Alignment:
Q |
79 |
ccaacaatatagaaatgaaagattatagaaaagatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaac |
178 |
Q |
|
|
||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
3148302 |
ccaacaatacagaaattaaagattatagaaaagatatttaccaaaaacagtgttttcagggtttgtgggagcttgattcttagcagcatcaccaaccaac |
3148401 |
T |
 |
Q |
179 |
ctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3148402 |
ctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
3148468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 6790399 - 6790507
Alignment:
Q |
137 |
gggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgt |
236 |
Q |
|
|
||||| ||||||||||||| ||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
6790399 |
gggttggtggcagcttgatacttagcagcatcaccgatcaacctttggtcatcggtgaaagcaacaaaagaaggtgtggttttgttaccttggtcattgt |
6790498 |
T |
 |
Q |
237 |
gaataatct |
245 |
Q |
|
|
||||||||| |
|
|
T |
6790499 |
gaataatct |
6790507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 1302277 - 1302399
Alignment:
Q |
114 |
atttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
|||||||||||||| | |||||||| || || ||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||| |
|
|
T |
1302277 |
atttaccaaaaacagtattttcaggattggttgcagcctgattcttagcagcatcaccgatcaacctttgatcatcggtgaaagcaacaaaagacggtgt |
1302376 |
T |
 |
Q |
214 |
ggttttgttgccttggtcattgt |
236 |
Q |
|
|
||||||||||||||||| |||| |
|
|
T |
1302377 |
tgttttgttgccttggtcgttgt |
1302399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 8660214 - 8660332
Alignment:
Q |
118 |
accaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggtt |
217 |
Q |
|
|
|||||||||| ||||| |||| || || ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||| |
|
|
T |
8660214 |
accaaaaacagtgtttacaggattggttgcagcctgattcttagcagcatcaccaatcaacctttgatcgtcagtgaaagcaacaaatgaaggtgttgtt |
8660313 |
T |
 |
Q |
218 |
ttgttgccttggtcattgt |
236 |
Q |
|
|
||||| |||||||| |||| |
|
|
T |
8660314 |
ttgtttccttggtcgttgt |
8660332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 10493122 - 10493008
Alignment:
Q |
129 |
tgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttg |
228 |
Q |
|
|
||||||||||||| ||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| ||| | || ||||| |
|
|
T |
10493122 |
tgttttcagggttagtggcagattgattcttagcagcatcaccgatcaacctttgatcattgttgaaagcaacaaaagaaggtgtagttctatttccttg |
10493023 |
T |
 |
Q |
229 |
gtcattgtgaataat |
243 |
Q |
|
|
|||||||||||||| |
|
|
T |
10493022 |
atcattgtgaataat |
10493008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 245
Target Start/End: Original strand, 8647658 - 8647798
Alignment:
Q |
105 |
agaaaagatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaa |
204 |
Q |
|
|
|||| ||| |||||||||| ||| |||| |||||| | ||||| ||||| ||||| |||||||||| ||||||||||||||| |||||||||||||| |
|
|
T |
8647658 |
agaatagaaatttaccaaagacagtgttggtagggttagaagcagcctgatttttagcggcatcaccaatcaacctttgatcatcggtgaaagcaacaaa |
8647757 |
T |
 |
Q |
205 |
agaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||| ||| |||| ||||| |||||||||||||||| |
|
|
T |
8647758 |
agaaggtgtagttctgtttccttgatcattgtgaataatct |
8647798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 13332271 - 13332155
Alignment:
Q |
129 |
tgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttg |
228 |
Q |
|
|
||||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||| | || ||||| |
|
|
T |
13332271 |
tgttttcagggttagtggcagattgattcttggcagcatcaccaatcaatctttgatcattgttgaaagcaacaaaagaaggtgtagttctatttccttg |
13332172 |
T |
 |
Q |
229 |
gtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||||||| |
|
|
T |
13332171 |
atcattgtgaataatct |
13332155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 7876939 - 7876841
Alignment:
Q |
145 |
ggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataat |
243 |
Q |
|
|
|||||| ||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
T |
7876939 |
ggcagcctgatttttggcagcatcaccaatcaacctttgatcattcgtgaaagcaacaaaagaaggtgttgttctgttgccttgttcattgtgaataat |
7876841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 117 - 245
Target Start/End: Original strand, 8630197 - 8630325
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggt |
216 |
Q |
|
|
||||||| ||| |||||| ||||| ||||||| |||| |||||||||| |||||||||||||||||||||| || |||||||| || ||||||||| | |
|
|
T |
8630197 |
taccaaagacagtgttttgtgggttgatggcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacgaaggaaggtgtgat |
8630296 |
T |
 |
Q |
217 |
tttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||| ||||||| |||||||||||||||| |
|
|
T |
8630297 |
tttattgccttcatcattgtgaataatct |
8630325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 8655315 - 8655446
Alignment:
Q |
114 |
atttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
|||||||||| ||| ||||||| ||||| || |||| |||||||| ||| ||| |||| ||||||||||| ||||||||||||||||| ||||||||| |
|
|
T |
8655315 |
atttaccaaatacagtgttttcggggttggtagcagattgattctcagctccattgccaatcaacctttgataatcagtgaaagcaacaacagaaggtgt |
8655414 |
T |
 |
Q |
214 |
ggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||| | |||||||| |||||||||||||||| |
|
|
T |
8655415 |
agttctattgccttgatcattgtgaataatct |
8655446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 8668431 - 8668562
Alignment:
Q |
114 |
atttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
|||||||||| | | ||||||||||||| || |||| |||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||| |
|
|
T |
8668431 |
atttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcgccaatcaacctttgttcattgttgaaagcaacaaaagaaggtgt |
8668530 |
T |
 |
Q |
214 |
ggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|| ||| ||||| |||||||||||||||| |
|
|
T |
8668531 |
tattcggtttccttgatcattgtgaataatct |
8668562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 8584669 - 8584541
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggt |
216 |
Q |
|
|
||||||| ||| |||| || ||||| | ||||| |||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||| | |
|
|
T |
8584669 |
taccaaagacagtgttctctgggttgatagcagcctgatccttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacaaaggaaggtgtgat |
8584570 |
T |
 |
Q |
217 |
tttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||| ||||||| || ||||||||||||| |
|
|
T |
8584569 |
tttattgccttcatcgttgtgaataatct |
8584541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 27829466 - 27829350
Alignment:
Q |
129 |
tgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttg |
228 |
Q |
|
|
|||||| |||||| | |||||||| ||||||||||||||||||| |||||| || | || |||||||||||| |||||||||| || ||||||||||| |
|
|
T |
27829466 |
tgttttgagggttggaagcagcttggttcttagcagcatcaccaatcaacctctgtttgtccgtgaaagcaacacaagaaggtgttgtcttgttgccttg |
27829367 |
T |
 |
Q |
229 |
gtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||||||| |
|
|
T |
27829366 |
ttcattgtgaataatct |
27829350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 8610653 - 8610750
Alignment:
Q |
137 |
gggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcatt |
234 |
Q |
|
|
||||||| ||||||||||| |||||||||||||| | ||||||||||||| ||| |||||||||||||||||| |||||| |||| ||||| ||||| |
|
|
T |
8610653 |
gggtttgaagcagcttgatttttagcagcatcacctatcaacctttgatcaccagagaaagcaacaaaagaaggagtggttctgtttccttgctcatt |
8610750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 17261360 - 17261489
Alignment:
Q |
116 |
ttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtgg |
215 |
Q |
|
|
|||||||| || ||||||| |||||| ||||||||||||||||||| |||||||| | |||||||| ||| | || ||||||||||||||||| || |
|
|
T |
17261360 |
ttaccaaagacggtgttttctgggtttatggcagcttgattcttagcggcatcaccgatcaacctttcatctttagcaaaagcaacaaaagaaggagtaa |
17261459 |
T |
 |
Q |
216 |
ttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||| ||||| ||||||||||| |||| |
|
|
T |
17261460 |
ttttgtttccttgatcattgtgaatgatct |
17261489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 8602732 - 8602831
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||| ||||| || ||||||||||| | |||||||| ||||||||| ||||||||||||||||| || ||| |||| ||||| |||||||||||||||| |
|
|
T |
8602732 |
gcagcctgatttttggcagcatcaccgatcaaccttttatcatcagtaaaagcaacaaaagaaggagtagttctgtttccttgatcattgtgaataatct |
8602831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 8591411 - 8591495
Alignment:
Q |
161 |
gcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||| |||||||||||||| ||| |||||||||||||||||||| || | || ||||| |||||||||||||||| |
|
|
T |
8591411 |
gcagcatcaccaatcaacctttgatcattagtaaaagcaacaaaagaaggtgtaattctatttccttgatcattgtgaataatct |
8591495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 17269068 - 17269197
Alignment:
Q |
116 |
ttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtgg |
215 |
Q |
|
|
|||||||| || ||||||| ||||| ||||||||||||||||||| | |||||| | ||||||| ||| | || |||||||||||||| || || | |
|
|
T |
17269068 |
ttaccaaagacggtgttttctgggttcatggcagcttgattcttagcggaatcaccgataaacctttcatctttagcaaaagcaacaaaagacggagtag |
17269167 |
T |
 |
Q |
216 |
ttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||| |||||||| ||||||| |
|
|
T |
17269168 |
ttttgttgccttgatcattgtgtataatct |
17269197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 8582661 - 8582752
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtg |
237 |
Q |
|
|
||||||||||| || ||||||||||||| ||| |||||| || ||| ||||||||| |||||||||| |||||||| ||||| |||||||| |
|
|
T |
8582661 |
gcagcttgatttttggcagcatcaccaatcaatctttgagaattagtaaaagcaacacaagaaggtgttgttttgtttccttgatcattgtg |
8582752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 8635588 - 8635512
Alignment:
Q |
161 |
gcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtg |
237 |
Q |
|
|
||||||||||||| ||||||||| | ||||||||||||||| ||||||||||| || |||| ||||| |||||||| |
|
|
T |
8635588 |
gcagcatcaccaatcaacctttgtgcgtcagtgaaagcaacacaagaaggtgtgattctgttcccttgctcattgtg |
8635512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 29577102 - 29577002
Alignment:
Q |
137 |
gggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgt |
236 |
Q |
|
|
||||||| |||||| ||||| |||||||||| ||||| |||||| | |||||||||||| |||| ||||||||||||| | |||||||| ||||||| |
|
|
T |
29577102 |
gggtttgaggcagcctgatttttagcagcattaccaattaaccttagtgaatcagtgaaagctacaacagaaggtgtggttctattgccttgatcattgt |
29577003 |
T |
 |
Q |
237 |
g |
237 |
Q |
|
|
| |
|
|
T |
29577002 |
g |
29577002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 8104069 - 8104151
Alignment:
Q |
152 |
tgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcatt |
234 |
Q |
|
|
|||||||||||||||||||| | |||||||| | |||||||||||||||| |||| ||||| ||| |||| ||||| ||||| |
|
|
T |
8104069 |
tgattcttagcagcatcaccgatcaacctttcactatcagtgaaagcaacataagacggtgtcgttctgttcccttgatcatt |
8104151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 8546679 - 8546767
Alignment:
Q |
152 |
tgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
||||| || ||||||||||||| || |||||| || |||||||||||| |||||||||| |||||||| ||||| ||||||||||| |
|
|
T |
8546679 |
tgatttttggcagcatcaccaatcagcctttgggaatttgtgaaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaat |
8546767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 8382328 - 8382289
Alignment:
Q |
152 |
tgattcttagcagcatcaccaaccaacctttgatcatcag |
191 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
8382328 |
tgattcttagcagcatcaccaaccaacctttgatgatcag |
8382289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 8577287 - 8577384
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataat |
243 |
Q |
|
|
||||||||||| || |||||||| |||| ||| |||||| || || ||||||||| ||||||| |||||| |||| ||||| |||||||| ||||| |
|
|
T |
8577287 |
gcagcttgatttttggcagcatcgccaatcaatctttgagaattggtaaaagcaacacaagaaggagtggttctgtttccttgatcattgtgtataat |
8577384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 8016391 - 8016336
Alignment:
Q |
152 |
tgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaaga |
207 |
Q |
|
|
|||||||||||||||||||| | |||||||| | |||||||||||||||| |||| |
|
|
T |
8016391 |
tgattcttagcagcatcaccgatcaacctttcactatcagtgaaagcaacataaga |
8016336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 8568836 - 8568903
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
||||||||||| || ||||||||||||| ||| |||||| | ||||||||||||| |||||||||| |
|
|
T |
8568836 |
gcagcttgatttttggcagcatcaccaatcaatctttgagatttagtgaaagcaacacaagaaggtgt |
8568903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 8572588 - 8572679
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtg |
237 |
Q |
|
|
||||||||||| || ||||||||||| | ||| |||||| || ||| ||||||||| |||| || || ||| |||| |||||||||||||| |
|
|
T |
8572588 |
gcagcttgatttttggcagcatcaccgatcaatctttgagaattagtaaaagcaacacaagagggagttgttctgtttccttggtcattgtg |
8572679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 8538804 - 8538893
Alignment:
Q |
148 |
agcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtg |
237 |
Q |
|
|
||||||||| || ||||||||||||| ||| | |||| || | | ||| ||||| ||||||||||||||||||| ||||| || ||||| |
|
|
T |
8538804 |
agcttgatttttggcagcatcaccaatcaatcgttgagaattactaaaaccaacacaagaaggtgtggttttgtttccttgatcgttgtg |
8538893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 245
Target Start/End: Complemental strand, 4677676 - 4677545
Alignment:
Q |
114 |
atttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
|||||||||| ||| ||||||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
T |
4677676 |
atttaccaaagacagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcatcagtaaaagcaacaaaagaaggtgt |
4677577 |
T |
 |
Q |
214 |
ggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||||| ||||||| |||||||| |
|
|
T |
4677576 |
tgttttgttgccttgttcattgtaaataatct |
4677545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 34465382 - 34465253
Alignment:
Q |
116 |
ttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtgg |
215 |
Q |
|
|
|||||||||||| |||| | ||||| || |||| ||||||||||||||||| ||| | ||| |||||||||| ||| |||||||||||||||||||||| |
|
|
T |
34465382 |
ttaccaaaaacagtgttctgtgggttggtagcagtttgattcttagcagcattaccgatcaatctttgatcatgagtaaaagcaacaaaagaaggtgtgg |
34465283 |
T |
 |
Q |
216 |
ttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|| |||| ||||||||||||| |||||||| |
|
|
T |
34465282 |
ttgtgttaccttggtcattgtcaataatct |
34465253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 15596056 - 15596156
Alignment:
Q |
145 |
ggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatc |
244 |
Q |
|
|
|||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| || |||| |||||||||||||| |||||| |
|
|
T |
15596056 |
ggcagcttgactcttagcagcatcaccaatcaacctttgatcattagtgaaagaaacaaaagaaggtgtaattctgtttccttggtcattgtggataatc |
15596155 |
T |
 |
Q |
245 |
t |
245 |
Q |
|
|
| |
|
|
T |
15596156 |
t |
15596156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 42554320 - 42554192
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggt |
216 |
Q |
|
|
||||||| ||| |||||| ||||| ||||| | ||||| ||||||||||||||||| |||||||| || || ||| |||||||||||||||||||| || |
|
|
T |
42554320 |
taccaaagacagtgttttgggggttggtggcggtttgatccttagcagcatcaccaatcaacctttcatgatgagtaaaagcaacaaaagaaggtgttgt |
42554221 |
T |
 |
Q |
217 |
tttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||| |||||||||||||||| |
|
|
T |
42554220 |
tttgttgccttgatcattgtgaataatct |
42554192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 28220950 - 28221044
Alignment:
Q |
151 |
ttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|||||| ||||||||||| |||| |||||||| |||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||| |
|
|
T |
28220950 |
ttgatttttagcagcatcgccaatcaacctttcatcatcggtgaaagcaacaaaagaaggagttgttttgttgccttgatcattgtgaataatct |
28221044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 9323217 - 9323069
Alignment:
Q |
98 |
agattatagaaa-agatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaa |
196 |
Q |
|
|
|||| ||||||| ||| |||||||||| | | ||||||||||||| || |||| ||||||||||||||||||||||| ||||||||| |||| ||||| |
|
|
T |
9323217 |
agataatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaa |
9323118 |
T |
 |
Q |
197 |
gcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||||||| ||| ||| ||||| |||||||||||||||| |
|
|
T |
9323117 |
gcaacaaaagaaggtgttgttcggtttccttgatcattgtgaataatct |
9323069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 9377696 - 9377548
Alignment:
Q |
98 |
agattatagaaa-agatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaa |
196 |
Q |
|
|
|||| ||||||| ||| |||||||||| | | ||||||||||||| || |||| ||||||||||||||||||||||| ||||||||| |||| ||||| |
|
|
T |
9377696 |
agataatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccaatcaacctttgctcattgttgaaa |
9377597 |
T |
 |
Q |
197 |
gcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||||||| ||| ||| ||||| |||||||||||||||| |
|
|
T |
9377596 |
gcaacaaaagaaggtgttgttcggtttccttgatcattgtgaataatct |
9377548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 9335188 - 9335041
Alignment:
Q |
98 |
agattatagaaa-agatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaa |
196 |
Q |
|
|
|||| ||||||| ||| |||||||||| | | ||||||||||||| || |||| |||||||||||||||||||||| | |||||||| |||| ||||| |
|
|
T |
9335188 |
agataatagaaatagaaatttaccaaagatagtgttttcagggttagtagcagattgattcttagcagcatcaccatc-aacctttgctcattgttgaaa |
9335090 |
T |
 |
Q |
197 |
gcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||||||||||||||| ||| ||| ||||| |||||||||||||||| |
|
|
T |
9335089 |
gcaacaaaagaaggtgttgttcggtttccttgatcattgtgaataatct |
9335041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 30776083 - 30776196
Alignment:
Q |
114 |
atttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgt |
213 |
Q |
|
|
|||||||||| ||| |||||| |||||| | ||||| || | |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
30776083 |
atttaccaaagacagtgttttgagggttgatagcagcctggtccttagcagcagcaccgaccaacctttgaccatcagtgaaagcaacaaaagaaggtgt |
30776182 |
T |
 |
Q |
214 |
ggttttgttgcctt |
227 |
Q |
|
|
| ||||| |||||| |
|
|
T |
30776183 |
gattttgctgcctt |
30776196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 35133452 - 35133546
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
|||||||||||||||||||||||||| | |||||||||||| | ||||||||||| | |||||||||| |||||||||| ||| || |||||||| |
|
|
T |
35133452 |
gcagcttgattcttagcagcatcaccgatcaacctttgatccttagtgaaagcaatacaagaaggtgttgttttgttgctttgatcgttgtgaat |
35133546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 16656705 - 16656613
Alignment:
Q |
145 |
ggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtg |
237 |
Q |
|
|
|||| |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||| |||| || ||||||||||| |
|
|
T |
16656705 |
ggcaacttgattcttagcagcatcaccgatcaacctttgatcatgagtgaaagcaacaaaagaaggtgttgttctgtttccctggtcattgtg |
16656613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 43626281 - 43626417
Alignment:
Q |
109 |
aagatatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaa |
208 |
Q |
|
|
|||| |||||||||| ||| ||||||| |||| | || ||||||| ||||||||||||||||| ||||||||| || | |||||||| |||||||||| |
|
|
T |
43626281 |
aagaaatttaccaaagacagtgttttcggggtcggaggtagcttgacccttagcagcatcaccaatcaacctttggtccttagtgaaagaaacaaaagaa |
43626380 |
T |
 |
Q |
209 |
ggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
||||| ||| |||| |||||||||||||| ||||||| |
|
|
T |
43626381 |
ggtgtagttctgtttccttggtcattgtggataatct |
43626417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 12244540 - 12244413
Alignment:
Q |
113 |
tatttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtg |
212 |
Q |
|
|
||||||||||| ||| |||||| || ||| | ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |
|
|
T |
12244540 |
tatttaccaaagacagtgttttgagagttagcagcagcttgatttttagcagcatcaccaataaacctttgatcttcagtgaaagcaacacaagaaggtg |
12244441 |
T |
 |
Q |
213 |
tggttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
| ||| ||||||| || || |||||||| |
|
|
T |
12244440 |
ttgttctgttgccctgatcgttgtgaat |
12244413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 7543245 - 7543369
Alignment:
Q |
116 |
ttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtgg |
215 |
Q |
|
|
|||||||| ||| |||||| |||||| | |||||||||||||||||| |||||| | |||||| |||| || ||||||||||||||||||||||| | |
|
|
T |
7543245 |
ttaccaaagacagtgttttgagggttggaagcagcttgattcttagcattatcaccgatcaacctctgattttcggtgaaagcaacaaaagaaggtgttg |
7543344 |
T |
 |
Q |
216 |
ttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
|| ||||||||||||| |||||||| |
|
|
T |
7543345 |
ttctgttgccttggtcgttgtgaat |
7543369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 12000301 - 12000425
Alignment:
Q |
116 |
ttaccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtgg |
215 |
Q |
|
|
|||||||||||| |||||| || ||| | || ||||| || ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| |
|
|
T |
12000301 |
ttaccaaaaacagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcagtgaaagcaacacaagaaggtgtta |
12000400 |
T |
 |
Q |
216 |
ttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
||||||||||||| || |||||||| |
|
|
T |
12000401 |
ttttgttgccttgatcgttgtgaat |
12000425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 16661170 - 16661071
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|||||||||| |||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||||| || ||||| ||||||| |
|
|
T |
16661170 |
gcagcttgatccttagcagcaccaccgaccaacctttgagcatcagtaaaagcaacaaaagaaggtgtaattttgttgccttcatcgttgtggataatct |
16661071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 12258047 - 12257919
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggt |
216 |
Q |
|
|
||||||| ||| ||| || |||||| | |||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||| ||||||| || || |
|
|
T |
12258047 |
taccaaagacagtgtgttgagggttggcagcagcttgattcttagcagcatcaccaatcaacctttgatctttagtaaaagcaacacaagaaggcgttgt |
12257948 |
T |
 |
Q |
217 |
tttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
| |||| ||||| || |||||||| |||| |
|
|
T |
12257947 |
tctgtttccttgatcgttgtgaatgatct |
12257919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 12235796 - 12235895
Alignment:
Q |
146 |
gcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||||| || ||| | |||||||| || |||||||| |||| |
|
|
T |
12235796 |
gcagcttgattcttagcagcatcaccaatcaacctctgattttcggtgaaagcaacaaaagaaggggttgttctattgccttgatcgttgtgaatgatct |
12235895 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 14705432 - 14705555
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggt |
216 |
Q |
|
|
||||||| ||| ||||| |||||| | |||||||||||||||||||||||||||| ||||| |||| || |||||||||||||||||||| || || |
|
|
T |
14705432 |
taccaaagacagtgtttcgagggttggcagcagcttgattcttagcagcatcaccaatcaaccgctgattttcggtgaaagcaacaaaagaaggagttgt |
14705531 |
T |
 |
Q |
217 |
tttgttgccttggtcattgtgaat |
240 |
Q |
|
|
| | |||||||| || |||||||| |
|
|
T |
14705532 |
tctattgccttgatcgttgtgaat |
14705555 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 43745805 - 43745918
Alignment:
Q |
129 |
tgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttg |
228 |
Q |
|
|
|||||| |||||| ||||| | ||||||||||||||| ||||| | |||||||| || |||||| ||||||||||||||| || |||||||||||||| |
|
|
T |
43745805 |
tgttttgagggttggtggcggtttgattcttagcagcgtcacctatcaacctttcatgatcagtaaaagcaacaaaagaa---gttgttttgttgccttg |
43745901 |
T |
 |
Q |
229 |
gtcattgtgaataatct |
245 |
Q |
|
|
|||||||||||||||| |
|
|
T |
43745902 |
atcattgtgaataatct |
43745918 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 12529868 - 12529960
Alignment:
Q |
148 |
agcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaat |
240 |
Q |
|
|
||||||||| || ||||||| ||||| ||| || ||| || ||| ||||||||| |||||||||| |||||||| ||||| ||||||||||| |
|
|
T |
12529868 |
agcttgatttttggcagcatgaccaatcaatctctgagaattagtaaaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaat |
12529960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 28911283 - 28911363
Alignment:
Q |
117 |
taccaaaaacaatgttttcagggtttgtggcagcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaag |
197 |
Q |
|
|
|||| |||||| ||||||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
T |
28911283 |
tacctaaaacagtgttttcggggttggtggcagcctgattcttagcagcatcaccaatcaacctttgatcatcggtgaaag |
28911363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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