View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0689_low_19 (Length: 329)
Name: NF0689_low_19
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0689_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 58 - 296
Target Start/End: Original strand, 32862373 - 32862612
Alignment:
| Q |
58 |
atttcactccaaactgagtcaagttataattttctacagttagcaactttaccttaaatttttgtgacagaagatatgtgaaggaactactacatgtagg |
157 |
Q |
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| T |
32862373 |
atttcactccaaactgagtcaagttatagttttctacagttagcaactttaccttaaatttttgtgatagaagatatgtgaaggaactactacatgtagg |
32862472 |
T |
|
| Q |
158 |
tatatgataaaattatgagatataatatgaagg-aactactacatttcttctttcagtctaaactagttctactaaaaaacgagttttctagctcaagat |
256 |
Q |
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||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32862473 |
tatatgataaaattatgagatataatacgaaggaaactactacatttcttctttcagtctaaactagttctactaaaaaacgagttttctagctcaagat |
32862572 |
T |
|
| Q |
257 |
ataagtattctaagctgattggtgcagagtaacttataaa |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
32862573 |
ataagtattctaagctgattggtgcagagtaacttataaa |
32862612 |
T |
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