View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0689_low_37 (Length: 212)
Name: NF0689_low_37
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0689_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 14258301 - 14258496
Alignment:
| Q |
1 |
tgcgtttggaagaagagagggtgaaatggtggcggttgacggaggagaatgtgattagaggttggtggcagtggcggtgacggtggtgatggcggttgtg |
100 |
Q |
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| T |
14258301 |
tgcgtttggaagaagagagggtgaaatggtggcggttgacggaggagaatgtgataagaggttggtggcagtggcggtgacggtggtgatggcggttgtg |
14258400 |
T |
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| Q |
101 |
agaggttgaaggaggaagtaagtaatgatagtgatgtgtgtttgtgagtagtggaggcatggtggtggtggcgaagtaacgaagaagatgatgatg |
196 |
Q |
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| T |
14258401 |
agaggttgaaggaggaagtaagtaatgatagtgatgtgtgtttgtgagtagtggaggcatggtggttgtggcgaagtaacgaagaagatgatgatg |
14258496 |
T |
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