View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0689_low_8 (Length: 429)
Name: NF0689_low_8
Description: NF0689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0689_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 10470266 - 10470124
Alignment:
| Q |
75 |
cacagaccaatccaatagtgaaagaacataaagttccagaaaagaaacatcatgatctctcaagtactcgagagttgaaatgctgctccttgctcaatag |
174 |
Q |
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| T |
10470266 |
cacagaccaatccaacagtgaaagaacataaagttcctgaaaagaaacatcatgatctctcaagtactcgagagttgaaatgctgctccttgctcaatag |
10470167 |
T |
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| Q |
175 |
gtaacgtggtccgtaatacgcagcagaataaagaacgcatagc |
217 |
Q |
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| T |
10470166 |
gtaacgtggtccgtaatacgcagcagaataaagaacgcatagc |
10470124 |
T |
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