View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0690_low_12 (Length: 333)
Name: NF0690_low_12
Description: NF0690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0690_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 7128360 - 7128557
Alignment:
| Q |
96 |
atgacataaattaaatgttatcacatgcgtcagtgtcgtgtcggtattaaacattgatgcaagtgggacacgacacacattcgatcaattttcagtgcta |
195 |
Q |
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| T |
7128360 |
atgacataaattaaatgttatcacatgcgtcagtgtcgtgtcggtattaaacaatgatgcaagtgggacacgacacacattcgatcaattatcagtgcta |
7128459 |
T |
|
| Q |
196 |
caatggctatgattttctgtttgatatgaattatattctctctaaatttgtaaagtttacataaggattgacttcctgttttcttgatgttgtacttg |
293 |
Q |
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||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7128460 |
caaaggctatgattttctgtttgatatgcattatattctctctaattttttaaagtttacataaggattgacttcctgttttcttgatgttgtacttg |
7128557 |
T |
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