View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0692-Insertion-2 (Length: 450)

Name: NF0692-Insertion-2
Description: NF0692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0692-Insertion-2
NF0692-Insertion-2
[»] chr3 (84 HSPs)
chr3 (6-443)||(6840715-6841152)
chr3 (6-443)||(6521679-6522116)
chr3 (6-445)||(6522624-6523063)
chr3 (6-443)||(6521814-6522251)
chr3 (6-437)||(6521949-6522380)
chr3 (6-443)||(6522354-6522791)
chr3 (5-433)||(6840576-6841007)
chr3 (7-433)||(6840443-6840872)
chr3 (6-330)||(6840850-6841174)
chr3 (6-330)||(6522759-6523083)
chr3 (135-437)||(6521673-6521975)
chr3 (80-443)||(6840378-6840747)
chr3 (112-437)||(6555962-6556287)
chr3 (6-302)||(6555991-6556287)
chr3 (80-330)||(6528364-6528614)
chr3 (247-443)||(6521650-6521846)
chr3 (147-328)||(6734108-6734289)
chr3 (147-328)||(6781374-6781555)
chr3 (215-444)||(6528364-6528593)
chr3 (6-195)||(6528425-6528614)
chr3 (12-193)||(6734108-6734289)
chr3 (12-193)||(6781374-6781555)
chr3 (135-450)||(6734121-6734445)
chr3 (135-450)||(6781218-6781542)
chr3 (56-328)||(6796073-6796348)
chr3 (191-372)||(6796073-6796254)
chr3 (254-330)||(6932027-6932103)
chr3 (215-328)||(7586305-7586418)
chr3 (215-330)||(8570437-8570552)
chr3 (341-450)||(7586318-7586427)
chr3 (119-195)||(6932027-6932103)
chr3 (215-345)||(6734370-6734500)
chr3 (215-345)||(6781163-6781293)
chr3 (189-330)||(6481442-6481583)
chr3 (80-193)||(7586305-7586418)
chr3 (270-330)||(6942368-6942428)
chr3 (391-450)||(6932042-6932101)
chr3 (80-195)||(8570437-8570552)
chr3 (191-328)||(8453069-8453206)
chr3 (328-444)||(6592810-6592926)
chr3 (326-434)||(8453098-8453206)
chr3 (191-299)||(8588275-8588383)
chr3 (384-443)||(6450314-6450373)
chr3 (384-443)||(6730242-6730301)
chr3 (247-308)||(6450312-6450373)
chr3 (54-195)||(6481442-6481583)
chr3 (247-308)||(6730240-6730301)
chr3 (326-434)||(6796073-6796181)
chr3 (135-195)||(6942368-6942428)
chr3 (191-299)||(8470023-8470131)
chr3 (247-330)||(6592864-6592947)
chr3 (56-163)||(8453099-8453206)
chr3 (391-434)||(8588275-8588318)
chr3 (56-163)||(8588276-8588383)
chr3 (384-430)||(6481502-6481548)
chr3 (405-443)||(6942390-6942428)
chr3 (392-442)||(8570479-8570529)
chr3 (215-299)||(6945731-6945818)
chr3 (270-330)||(5297180-5297240)
chr3 (328-444)||(6915557-6915673)
chr3 (80-163)||(6945732-6945818)
chr3 (326-434)||(8470023-8470131)
chr3 (384-434)||(6945731-6945784)
chr3 (56-163)||(8470024-8470131)
chr3 (247-317)||(6915549-6915619)
chr3 (6-60)||(6932027-6932081)
chr3 (5-58)||(6734108-6734161)
chr3 (5-58)||(6781502-6781555)
chr3 (328-444)||(6723536-6723652)
chr3 (326-445)||(6840354-6840476)
chr3 (328-444)||(6880972-6881088)
chr3 (8-60)||(8570500-8570552)
chr3 (112-163)||(6450312-6450363)
chr3 (112-195)||(6592864-6592947)
chr3 (112-163)||(6730240-6730291)
chr3 (270-317)||(7748450-7748497)
chr3 (247-317)||(6723590-6723660)
chr3 (247-317)||(6880964-6881034)
chr3 (6-60)||(6942368-6942422)
chr3 (405-450)||(5297195-5297240)
chr3 (135-195)||(5297180-5297240)
chr3 (6-102)||(6734343-6734439)
chr3 (6-98)||(6781224-6781316)
chr3 (384-444)||(7748458-7748518)
[»] scaffold0425 (5 HSPs)
scaffold0425 (52-328)||(9085-9361)
scaffold0425 (6-193)||(9174-9361)
scaffold0425 (135-434)||(9033-9332)
scaffold0425 (247-429)||(9010-9192)
scaffold0425 (384-434)||(9012-9062)
[»] scaffold1643 (3 HSPs)
scaffold1643 (268-330)||(602-664)
scaffold1643 (326-444)||(623-744)
scaffold1643 (134-195)||(602-663)
[»] scaffold0958 (2 HSPs)
scaffold0958 (257-330)||(1317-1390)
scaffold0958 (392-432)||(1317-1357)


Alignment Details
Target: chr3 (Bit Score: 318; Significance: 1e-179; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 6 - 443
Target Start/End: Original strand, 6840715 - 6841152
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6840715 caacaccttccttctttacaaaaactgaagatttgtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6840814  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||||||    
T  6840815 tatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggattgcaacaagttggaggaattgttatg 6840914  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||    
T  6840915 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagag 6841014  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
    ||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||||||    
T  6841015 atttgggattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctc 6841114  T
Q  406 tgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6841115 tgcctcaacaccttccttctttacaaaaactgcagatt 6841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 6 - 443
Target Start/End: Original strand, 6521679 - 6522116
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||| |||||||||||||  || |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6521679 caacacctttcttctttacaaaaattgaagatcagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6521778  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    |||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  6521779 tatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatg 6521878  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  6521879 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggat 6521978  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
     |   |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||||||    
T  6521979 gtatttgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctc 6522078  T
Q  406 tgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    ||| |||||||||||||||||||||||||||| |||||    
T  6522079 tgcatcaacaccttccttctttacaaaaactggagatt 6522116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 6 - 445
Target Start/End: Original strand, 6522624 - 6523063
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| |  |   |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  6522624 caacaccttccttctttacaaaaactggatgtatttgattgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6522723  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    |||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  6522724 tatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatg 6522823  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  6522824 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggat 6522923  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
     |   |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||||||    
T  6522924 gtatttgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctc 6523023  T
Q  406 tgcctcaacaccttccttctttacaaaaactgaagattag 445  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6523024 tgcctcaacaccttccttctttacaaaaactgaagattag 6523063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 6 - 443
Target Start/End: Original strand, 6521814 - 6522251
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| ||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6521814 caacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6521913  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |  |   |||||||||| |||||||||||||||||||    
T  6521914 taagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgattgcaacgagttggaggaattgttatg 6522013  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  6522014 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggag 6522113  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
    ||| |  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||||||    
T  6522114 attcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctc 6522213  T
Q  406 tgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    ||| |||||||||||||||||||||||| ||| |||||    
T  6522214 tgcatcaacaccttccttctttacaaaatctggagatt 6522251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 6 - 437
Target Start/End: Original strand, 6521949 - 6522380
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| |  |   |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6521949 caacaccttccttctttacaaaaactggatgtatttgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6522048  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  6522049 taagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatg 6522148  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||    
T  6522149 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaatctggag 6522248  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
    ||| |  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||||||    
T  6522249 attcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctc 6522348  T
Q  406 tgcctcaacaccttccttctttacaaaaactg 437  Q
    ||||||||||||||||||||||||||||||||    
T  6522349 tgcctcaacaccttccttctttacaaaaactg 6522380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 6 - 443
Target Start/End: Original strand, 6522354 - 6522791
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| |  |   |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  6522354 caacaccttccttctttacaaaaactggatgtatttgattgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6522453  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    |||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |  ||||||||||||||||||||||||||||    
T  6522454 tatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatg 6522553  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  6522554 ccttggagagtttcctttgcttaaagagatttctataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggat 6522653  T
Q  306 attagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctc 405  Q
     |   |||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||  |||| |   |||||| |||||||||||||||    
T  6522654 gtatttgattgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctc 6522753  T
Q  406 tgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    ||| |||||||||||||||||||||||||||| |||||    
T  6522754 tgcatcaacaccttccttctttacaaaaactggagatt 6522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 5 - 433
Target Start/End: Original strand, 6840576 - 6841007
Alignment:
Q  5 acaacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcc 104  Q
    |||||||||||||||||||||||| |||||  |   |||||| ||| |||||||| ||| ||| || |||| || | ||||||||||||||||||||||     
T  6840576 acaacaccttccttctttacaaaaactgcatgtatttgattgcaacgagttggagaaatggttttgtcttgaagggattcctttgcttaaagagatttct 6840675  T
Q  105 atatccgattgtcccgaattgaaaaggg---ttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgt 201  Q
    |||    |||| ||| |||| |||||||   | || |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  6840676 ataagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactgaagatttgtgattgcaacaagttggaggaattgt 6840775  T
Q  202 tatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaact 301  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6840776 tatgccttggagagtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatct 6840875  T
Q  302 gaagattagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagg 401  Q
      ||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||   || |||||| |||||||||||    
T  6840876 agagatttgggattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagg 6840975  T
Q  402 gctctgcctcaacaccttccttctttacaaaa 433  Q
    ||||||||||||||||||||||||||||||||    
T  6840976 gctctgcctcaacaccttccttctttacaaaa 6841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 7 - 433
Target Start/End: Original strand, 6840443 - 6840872
Alignment:
Q  7 aacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccat 106  Q
    |||||||| ||||||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  6840443 aacaccttacttctttacaaaagctggagattagttattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttatat 6840542  T
Q  107 atccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgc 206  Q
    || |||||||||| |||||||||||| |||||| ||||||||||||||||||||||| |||||  |   |||||||||| |||||||| ||| ||| ||     
T  6840543 attcgattgtcccaaattgaaaagggctctgccacaacaccttccttctttacaaaaactgcatgtatttgattgcaacgagttggagaaatggttttgt 6840642  T
Q  207 cttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggc---tctgcctcaacaccttccttctttacaaaaactga 303  Q
    |||| || | |||||||||||||||||||||| |||    |||| ||| |||| ||||||||    || |||||||||||||||||||||||||||||||    
T  6840643 cttgaagggattcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactga 6840742  T
Q  304 agattagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggc 403  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||| | | |||||| |||||||||||||    
T  6840743 agatttgtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggc 6840842  T
Q  404 tctgcctcaacaccttccttctttacaaaa 433  Q
    ||||||||||||||||||||||||||||||    
T  6840843 tctgcctcaacaccttccttctttacaaaa 6840872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 6 - 330
Target Start/End: Original strand, 6840850 - 6841174
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||||||  ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6840850 caacaccttccttctttacaaaatctagagatttgggattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6840949  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||||||    
T  6840950 taagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggattgcaacaagttggaggaattgttatg 6841049  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6841050 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgcag 6841149  T
Q  306 attagtgattgcaacaagttggagg 330  Q
    ||| | |||||||||||| ||||||    
T  6841150 atttgggattgcaacaagatggagg 6841174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 330
Target Start/End: Original strand, 6522759 - 6523083
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||||||||||||||||||||| ||| ||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6522759 caacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcta 6522858  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |  |   |||||||||| |||||||||||||||||||    
T  6522859 taagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgattgcaacgagttggaggaattgttatg 6522958  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 305  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6522959 ccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 6523058  T
Q  306 attagtgattgcaacaagttggagg 330  Q
    |||||| ||||||||||| ||||||    
T  6523059 attagtaattgcaacaagatggagg 6523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 135 - 437
Target Start/End: Original strand, 6521673 - 6521975
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagaga 234  Q
    ||||||||||||||| |||||||||||||  || |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6521673 ctgcctcaacacctttcttctttacaaaaattgaagatcagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagaga 6521772  T
Q  235 tttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggaggaatt 334  Q
    |||| ||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||    
T  6521773 tttctatatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaatt 6521872  T
Q  335 gttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaa 434  Q
    |||||| ||||||||||| |||||||||||||||||||  |||   || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6521873 gttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa 6521972  T
Q  435 ctg 437  Q
    |||    
T  6521973 ctg 6521975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 80 - 443
Target Start/End: Original strand, 6840378 - 6840747
Alignment:
Q  80 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaaggg---ttctgcctcaacaccttccttctttacaaaatctgcagattagt 176  Q
    |||||||||||||||| ||||||| |||    | |||||| ||||||||| ||   | |||||| |||||||| ||||||||||||| ||| ||||||||    
T  6840378 gtttcctttgcttaaaaagatttctataagaaaatgtcccaaattgaaaaaggcagtgctgcctaaacaccttacttctttacaaaagctggagattagt 6840477  T
Q  177 gattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctc 276  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||| |    
T  6840478 tattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgccac 6840577  T
Q  277 aacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggat 376  Q
    |||||||||||||||||||||||||| |  |   |||||||||| |||||||| ||| ||| ||||||| || | | |||||||||||||||||||  ||    
T  6840578 aacaccttccttctttacaaaaactgcatgtatttgattgcaacgagttggagaaatggttttgtcttgaagggattcctttgcttaaagagatttctat 6840677  T
Q  377 attcaagtgtcccaaattgaaaagggc---tctgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    |   || || |||||||| ||||||||    || ||||||||||||||||||||||||||||||||||||    
T  6840678 aagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactgaagatt 6840747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 112 - 437
Target Start/End: Original strand, 6555962 - 6556287
Alignment:
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttgg 211  Q
    |||||||  |||||||||| ||  |||||||||| ||||| |||||||||||| ||  ||| | ||||||||||| |||||||||||  |||||||||||    
T  6555962 attgtcctaaattgaaaagagtattgcctcaacatcttccatctttacaaaatttgtggatcaatgattgcaacatgttggaggaatgtttatgccttgg 6556061  T
Q  212 agagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagt 311  Q
    |||||||||||||||||||||| |||  |||    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |   |    
T  6556062 agagtttcctttgcttaaagagtttttaataagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactgggtgtattt 6556161  T
Q  312 gattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctc 411  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | |||  |||   || |||| | |||||||||||||||||||||    
T  6556162 gattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagtgttttctataagaaattgtctcgaattgaaaagggctctgcctc 6556261  T
Q  412 aacaccttccttctttacaaaaactg 437  Q
    ||||||||||||||||||||||||||    
T  6556262 aacaccttccttctttacaaaaactg 6556287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 6 - 302
Target Start/End: Original strand, 6555991 - 6556287
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||| ||||| |||||||||||| ||  ||| | |||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||| |||  |    
T  6555991 caacatcttccatctttacaaaatttgtggatcaatgattgcaacatgttggaggaatgtttatgccttggagagtttcctttgcttaaagagtttttaa 6556090  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatg 205  Q
    ||    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||    |   |||||||||| |||||||||||||||||||    
T  6556091 taagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactgggtgtatttgattgcaacgagttggaggaattgttatg 6556190  T
Q  206 ccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactg 302  Q
    |||||||||||||||||||||||||| | |||| |||    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6556191 ccttggagagtttcctttgcttaaagtgttttctataagaaattgtctcgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactg 6556287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 80 - 330
Target Start/End: Original strand, 6528364 - 6528614
Alignment:
Q  80 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgat 179  Q
    ||||||||||||||||||| |||| |||    |||||||  ||||||||||     |||||||||| |||||||||||||||||  ||   || | | ||    
T  6528364 gtttcctttgcttaaagagctttctataagaaattgtcctaaattgaaaagcaccttgcctcaacagcttccttctttacaaaaattgtgcataaataat 6528463  T
Q  180 tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaac 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |   ||||||||||||||||||||||||||||||||    
T  6528464 tgcaacaagttggaggaatggttatgccttggagagtttcctttgcttaaagagatttctataacaagttgtcccgaattgaaaagggctctgcctcaac 6528563  T
Q  280 accttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    ||||||||||||||||||||||| |||||| |||||||| |||| ||||||    
T  6528564 accttccttctttacaaaaactggagattattgattgcagcaagatggagg 6528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 247 - 443
Target Start/End: Original strand, 6521650 - 6521846
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggaggaattgttatgtcttgg 346  Q
    |||||||  ||||||||||  | ||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||    
T  6521650 attgtcctaaattgaaaagcaccctgcctcaacacctttcttctttacaaaaattgaagatcagtgattgcaacgagttggaggaattgttatgccttgg 6521749  T
Q  347 agagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    |||||| |||||||||||||||||||  |||| |   |||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  6521750 agagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagatt 6521846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 147 - 328
Target Start/End: Complemental strand, 6734289 - 6734108
Alignment:
Q  147 cttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccg 246  Q
    ||||| |||||||||||  ||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |     
T  6734289 cttccatctttacaaaaattgcggatcaatgattgcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattca 6734190  T
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttgga 328  Q
    | ||| | |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  6734189 aatgttctgaattgaaaagggctctgccacaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6734108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 147 - 328
Target Start/End: Original strand, 6781374 - 6781555
Alignment:
Q  147 cttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccg 246  Q
    ||||| |||||||||||  ||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |     
T  6781374 cttccatctttacaaaaattgcggatcaatgattgcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattca 6781473  T
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttgga 328  Q
    | ||| | |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  6781474 aatgttctgaattgaaaagggctctgccacaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6781555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 215 - 444
Target Start/End: Original strand, 6528364 - 6528593
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgat 314  Q
    ||||||||||||||||||| |||| |||    |||||||  ||||||||||  |  |||||||||| |||||||||||||||||| ||   || | | ||    
T  6528364 gtttcctttgcttaaagagctttctataagaaattgtcctaaattgaaaagcaccttgcctcaacagcttccttctttacaaaaattgtgcataaataat 6528463  T
Q  315 tgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaag-tgtcccaaattgaaaagggctctgcctcaa 413  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||  |||  |||| |||||| |||||||||||||||||||||||    
T  6528464 tgcaacaagttggaggaatggttatgccttggagagtttcctttgcttaaagagatttctata-acaagttgtcccgaattgaaaagggctctgcctcaa 6528562  T
Q  414 caccttccttctttacaaaaactgaagatta 444  Q
    |||||||||||||||||||||||| ||||||    
T  6528563 caccttccttctttacaaaaactggagatta 6528593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 6 - 195
Target Start/End: Original strand, 6528425 - 6528614
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||| |||||||||||||||||  ||   || | | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  6528425 caacagcttccttctttacaaaaattgtgcataaataattgcaacaagttggaggaatggttatgccttggagagtttcctttgcttaaagagatttcta 6528524  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    || |   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| ||||||    
T  6528525 taacaagttgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggagattattgattgcagcaagatggagg 6528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 6734289 - 6734108
Alignment:
Q  12 cttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccg 111  Q
    ||||| |||||||||||  ||| ||| | |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |     
T  6734289 cttccatctttacaaaaattgcggatcaatgattgcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattca 6734190  T
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttgga 193  Q
    | ||| | ||||||||||||| |||||| |||||||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  6734189 aatgttctgaattgaaaagggctctgccacaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6734108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 6781374 - 6781555
Alignment:
Q  12 cttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccg 111  Q
    ||||| |||||||||||  ||| ||| | |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |     
T  6781374 cttccatctttacaaaaattgcggatcaatgattgcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattca 6781473  T
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttgga 193  Q
    | ||| | ||||||||||||| |||||| |||||||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  6781474 aatgttctgaattgaaaagggctctgccacaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6781555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 135 - 450
Target Start/End: Complemental strand, 6734445 - 6734121
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagaga 234  Q
    ||||||||||| |||||||||||||||||  || | ||||||| ||||||  |||||||||||| |||||| |||| || ||||| ||  |||||||||     
T  6734445 ctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagc 6734346  T
Q  235 tttccatatccgattgtcccgaattgaaaagggctctgcctcaac---------accttccttctttacaaaaactgaagattagtgattgcaacaagtt 325  Q
    |||  |||    ||||| || |||| ||||| |   |||||||||         | ||||| |||||||||||| ||  ||| | ||||||||||| |||    
T  6734345 tttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaattgcggatcaatgattgcaacatgtt 6734246  T
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttct 425  Q
    |||||||| |||||| ||||||||||| |||||||||||||| ||||  |||||||| ||| |  ||||||||||||||||||| |||||||||||||||    
T  6734245 ggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaacaccttccttct 6734146  T
Q  426 ttacaaaaactgaagattagagatt 450  Q
    ||||| |||||| ||||||||||||    
T  6734145 ttacagaaactggagattagagatt 6734121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 135 - 450
Target Start/End: Original strand, 6781218 - 6781542
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagaga 234  Q
    ||||||||||| |||||||||||||||||  || | ||||||| ||||||  |||||||||||| |||||| |||| || ||||| ||  |||||||||     
T  6781218 ctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagc 6781317  T
Q  235 tttccatatccgattgtcccgaattgaaaagggctctgcctcaac---------accttccttctttacaaaaactgaagattagtgattgcaacaagtt 325  Q
    |||  |||    ||||| || |||| ||||| |   |||||||||         | ||||| |||||||||||| ||  ||| | ||||||||||| |||    
T  6781318 tttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaattgcggatcaatgattgcaacatgtt 6781417  T
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttct 425  Q
    |||||||| |||||| ||||||||||| |||||||||||||| ||||  |||||||| ||| |  ||||||||||||||||||| |||||||||||||||    
T  6781418 ggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaacaccttccttct 6781517  T
Q  426 ttacaaaaactgaagattagagatt 450  Q
    ||||| |||||| ||||||||||||    
T  6781518 ttacagaaactggagattagagatt 6781542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 328
Target Start/End: Original strand, 6796073 - 6796348
Alignment:
Q  56 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttct 155  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||  ||| |   ||||| |||||||||||||| || ||||||| |||||||||||    
T  6796073 ggaggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttct 6796172  T
Q  156 ttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccg 255  Q
    ||||||||  ||  ||| | | ||||||  | ||| ||||||| |||||||| ||||||||||||||||||||||||||||||  ||   | ||||  |     
T  6796173 ttacaaaaattgtggatcaataattgcatgatgtttgaggaatggttatgccctggagagtttcctttgcttaaagagatttctgtaaatgtttgttaca 6796272  T
Q  256 aattgaaaaggg-ct--ctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttgga 328  Q
    | || ||||||| ||  || ||||||||||||||||||||||| ||| |||||||| |||||||| || |||||||    
T  6796273 acttaaaaagggtcttgcttcctcaacaccttccttctttacagaaaatgaagattggtgattgctacgagttgga 6796348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 191 - 372
Target Start/End: Original strand, 6796073 - 6796254
Alignment:
Q  191 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttct 290  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||  ||| |   ||||| ||||||||||||||||| ||||||| |||||||||||    
T  6796073 ggaggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttct 6796172  T
Q  291 ttacaaaaactgaagattagtgattgcaacaagttggaggaattgttatgtcttggagagttccctttgcttaaagagattt 372  Q
    ||||||||| ||  ||| | | ||||||  | ||| ||||||| |||||| | ||||||||| |||||||||||||||||||    
T  6796173 ttacaaaaattgtggatcaataattgcatgatgtttgaggaatggttatgccctggagagtttcctttgcttaaagagattt 6796254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 6932103 - 6932027
Alignment:
Q  254 cgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  6932103 cgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactggagattagtgattgccacaagtttgagg 6932027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 7586418 - 7586305
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgat 314  Q
    ||||||||||||||||||| |||| |||    | |||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||    
T  7586418 gtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttacagaaactggagattaaagat 7586319  T
Q  315 tgcaacaagttgga 328  Q
    ||||| ||||||||    
T  7586318 tgcaagaagttgga 7586305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 330
Target Start/End: Original strand, 8570437 - 8570552
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgat 314  Q
    |||||||||||||||| || |||| |||    |||||| |  |||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  8570437 gtttcctttgcttaaaaagctttctataagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagtgat 8570536  T
Q  315 tgcaacaagttggagg 330  Q
    ||||| ||||||||||    
T  8570537 tgcaagaagttggagg 8570552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 450
Target Start/End: Complemental strand, 7586427 - 7586318
Alignment:
Q  341 tcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaag 440  Q
    ||||| || ||| ||||||||||||||| |||  |||   || |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||    
T  7586427 tcttgaagggtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttacagaaactggag 7586328  T
Q  441 attagagatt 450  Q
    |||| |||||    
T  7586327 attaaagatt 7586318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 6932103 - 6932027
Alignment:
Q  119 cgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||||    
T  6932103 cgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactggagattagtgattgccacaagtttgagg 6932027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 345
Target Start/End: Complemental strand, 6734500 - 6734370
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgat 314  Q
    |||||||||||||| |||| |||| ||| |  |||||||  || ||||| |  | ||||||||||| |||||||||||||||||| |||| ||||||| |    
T  6734500 gtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggt 6734401  T
Q  315 tgcaacaagttggaggaattgttatgtcttg 345  Q
    |||||  |||||||||||| |||||||||||    
T  6734400 tgcaaagagttggaggaatggttatgtcttg 6734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 345
Target Start/End: Original strand, 6781163 - 6781293
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgat 314  Q
    |||||||||||||| |||| |||| ||| |  |||||||  || ||||| |  | ||||||||||| |||||||||||||||||| |||| ||||||| |    
T  6781163 gtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggt 6781262  T
Q  315 tgcaacaagttggaggaattgttatgtcttg 345  Q
    |||||  |||||||||||| |||||||||||    
T  6781263 tgcaaagagttggaggaatggttatgtcttg 6781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 330
Target Start/End: Original strand, 6481442 - 6481583
Alignment:
Q  189 ttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttcctt 288  Q
    |||||||||| |||||| | || || |||||  | |||||||||| || | |||   ||||||||| ||||||||||||| || ||||||||||||||||    
T  6481442 ttggaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttcctt 6481541  T
Q  289 ctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    ||||||| ||| ||  ||||| | ||||||||||||||||||    
T  6481542 ctttacagaaattgtcgattattaattgcaacaagttggagg 6481583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 7586418 - 7586305
Alignment:
Q  80 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgat 179  Q
    ||||||||||||||||||| |||| |||    | |||||| | |||||||||| ||||||||||||||||||||||||||| || ||| ||||||  |||    
T  7586418 gtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttacagaaactggagattaaagat 7586319  T
Q  180 tgcaacaagttgga 193  Q
    ||||| ||||||||    
T  7586318 tgcaagaagttgga 7586305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 6942428 - 6942368
Alignment:
Q  270 ctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  6942428 ctgcctcaacaccttccttctttacaaaaactgaagattggttattgcaacaagatggagg 6942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 450
Target Start/End: Complemental strand, 6932101 - 6932042
Alignment:
Q  391 aattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagagatt 450  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  6932101 aattgaaaagggctcttcctcaacaccttccttctttacaaaaactggagattagtgatt 6932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 8570437 - 8570552
Alignment:
Q  80 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgat 179  Q
    |||||||||||||||| || |||| |||    |||||| |  |||||||||||  ||||||| ||||||||||||||||||||| ||| |||| ||||||    
T  8570437 gtttcctttgcttaaaaagctttctataagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagtgat 8570536  T
Q  180 tgcaacaagttggagg 195  Q
    ||||| ||||||||||    
T  8570537 tgcaagaagttggagg 8570552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 328
Target Start/End: Complemental strand, 8453206 - 8453069
Alignment:
Q  191 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttct 290  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||  |||   || |||||| ||||||||| | | |||||||||||||||||||||    
T  8453206 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttct 8453107  T
Q  291 ttacaaaaactgaagattagtgattgcaacaagttgga 328  Q
    ||||||||| ||   |||| ||||||||| | ||||||    
T  8453106 ttacaaaaattgttcattaatgattgcaagatgttgga 8453069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 444
Target Start/End: Original strand, 6592810 - 6592926
Alignment:
Q  328 aggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttcttt 427  Q
    |||||| ||||||||||| ||  |||||||||||| ||||| |||| |||    | |||||||| |||||||| || |||||||||||||||||||||||    
T  6592810 aggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacaccttccttcttt 6592909  T
Q  428 acaaaaactgaagatta 444  Q
     |||||| || ||||||    
T  6592910 gcaaaaattggagatta 6592926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 8453206 - 8453098
Alignment:
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttct 425  Q
    |||||||| ||| ||||||| || ||| ||||||||||||||| |||  |||    | |||||||||||||||| | | |||||||||||||||||||||    
T  8453206 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttct 8453107  T
Q  426 ttacaaaaa 434  Q
    |||||||||    
T  8453106 ttacaaaaa 8453098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 8588383 - 8588275
Alignment:
Q  191 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttct 290  Q
    |||||||| | ||||||||  || |||||||||||||||| || | |  |||   || ||||| ||||||||||||||| ||||||||||||||||||||    
T  8588383 ggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttct 8588284  T
Q  291 ttacaaaaa 299  Q
    |||||||||    
T  8588283 ttacaaaaa 8588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 6450314 - 6450373
Alignment:
Q  384 tgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  6450314 tgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagatt 6450373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 6730242 - 6730301
Alignment:
Q  384 tgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  6730242 tgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagatt 6730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 6450312 - 6450373
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatt 308  Q
    |||||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  6450312 attgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagatt 6450373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 195
Target Start/End: Original strand, 6481442 - 6481583
Alignment:
Q  54 ttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttcctt 153  Q
    |||||||||| |||||| | || || |||||  | |||||||||| || | |||   ||||||||| ||||||||||||  || ||||||||||||||||    
T  6481442 ttggaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttcctt 6481541  T
Q  154 ctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    ||||||| ||  ||  ||||| | ||||||||||||||||||    
T  6481542 ctttacagaaattgtcgattattaattgcaacaagttggagg 6481583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 6730240 - 6730301
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatt 308  Q
    |||||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  6730240 attgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagatt 6730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 6796073 - 6796181
Alignment:
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagt-gtcccaaattgaaaagggctctgcctcaacaccttccttc 424  Q
    |||||||| ||| ||||||| || ||| ||||||||||||||| |||  |||  ||||| ||| | ||||||||||||||| ||||||| ||||||||||    
T  6796073 ggaggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataa-caagttgtcacgaattgaaaagggctcagcctcaaaaccttccttc 6796171  T
Q  425 tttacaaaaa 434  Q
    ||||||||||    
T  6796172 tttacaaaaa 6796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 6942428 - 6942368
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    ||||||||||||||||||||||||||||| ||| ||||| || ||||||||||| ||||||    
T  6942428 ctgcctcaacaccttccttctttacaaaaactgaagattggttattgcaacaagatggagg 6942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 8470131 - 8470023
Alignment:
Q  191 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttct 290  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||| |||      ||||||||||||| ||| ||  ||||||||||||||||||||    
T  8470131 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttct 8470032  T
Q  291 ttacaaaaa 299  Q
    |||||||||    
T  8470031 ttacaaaaa 8470023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 6592864 - 6592947
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    |||||||| | |||||||| || ||||||||||||||||||||||| |||||| || |||||| ||||||| |  |||||||||    
T  6592864 attgtcccaagttgaaaagagccctgcctcaacaccttccttctttgcaaaaattggagattactgattgccaagagttggagg 6592947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 8453206 - 8453099
Alignment:
Q  56 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttct 155  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||  |||   || |||||| ||||||||| |   |||||||||||||||||||||    
T  8453206 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttct 8453107  T
Q  156 ttacaaaa 163  Q
    ||||||||    
T  8453106 ttacaaaa 8453099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 8588318 - 8588275
Alignment:
Q  391 aattgaaaagggctctgcctcaacaccttccttctttacaaaaa 434  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  8588318 aattgaaaagggctttgcctcaacaccttccttctttacaaaaa 8588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 8588383 - 8588276
Alignment:
Q  56 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttct 155  Q
    |||||||| | ||||||||  || |||||||||||||||| || | |  |||   || ||||| ||||||||||||| | ||||||||||||||||||||    
T  8588383 ggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttct 8588284  T
Q  156 ttacaaaa 163  Q
    ||||||||    
T  8588283 ttacaaaa 8588276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 6481502 - 6481548
Alignment:
Q  384 tgtcccaaattgaaaagggctctgcctcaacaccttccttctttaca 430  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  6481502 tgtcccaaattgaaaagggcccttcctcaacaccttccttctttaca 6481548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 405 - 443
Target Start/End: Complemental strand, 6942428 - 6942390
Alignment:
Q  405 ctgcctcaacaccttccttctttacaaaaactgaagatt 443  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6942428 ctgcctcaacaccttccttctttacaaaaactgaagatt 6942390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 8570479 - 8570529
Alignment:
Q  392 attgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagat 442  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  8570479 attgaaaagggccctgcctcgacaccttccttctttacaaaaactggagat 8570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 6945818 - 6945731
Alignment:
Q  215 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggct---ctgcctcaacaccttccttctttacaaaaa 299  Q
    ||||||||||||||||||| || | |||    |||||||| |||||||||||||    ||||||||||||||||||||||||||||||    
T  6945818 gtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaaa 6945731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 5297240 - 5297180
Alignment:
Q  270 ctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||| |  |||||||||    
T  5297240 ctgcctcaacatcttccttctttgcaaaaattgaagattagtgattgccaagagttggagg 5297180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 6915673 - 6915557
Alignment:
Q  328 aggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttcttt 427  Q
    |||||| ||||||||||| |   |||||||||||| ||||| |||| |||    | |||||||| ||||||||  | |||||||||||||||||||||||    
T  6915673 aggaatggttatgtcttgaatgtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttcttt 6915574  T
Q  428 acaaaaactgaagatta 444  Q
     |||||| || ||||||    
T  6915573 gcaaaaattggagatta 6915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 6945818 - 6945732
Alignment:
Q  80 gtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaaggg---ttctgcctcaacaccttccttctttacaaaa 163  Q
    ||||||||||||||||||| || | |||    |||||||| ||||||||||||   | |||||||||||||||||||||||||||||    
T  6945818 gtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaa 6945732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 8470131 - 8470023
Alignment:
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttct 425  Q
    |||||||| ||| ||||||| || ||| ||||||||||||||| |||  |||   |  |||||| |||||| ||| ||  ||||||||||||||||||||    
T  8470131 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttct 8470032  T
Q  426 ttacaaaaa 434  Q
    |||||||||    
T  8470031 ttacaaaaa 8470023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 6945784 - 6945731
Alignment:
Q  384 tgtcccaaattgaaaagggct---ctgcctcaacaccttccttctttacaaaaa 434  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  6945784 tgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaaa 6945731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 8470131 - 8470024
Alignment:
Q  56 ggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttct 155  Q
    |||||||| ||| || |||| || ||||||||||||||||||| |||| |||      ||||||||||||| ||| |   ||||||||||||||||||||    
T  8470131 ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttct 8470032  T
Q  156 ttacaaaa 163  Q
    ||||||||    
T  8470031 ttacaaaa 8470024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 6915619 - 6915549
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgc 317  Q
    |||||||| | ||||||||  | ||||||||||||||||||||||| |||||| || |||||| |||||||    
T  6915619 attgtcccaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagattattgattgc 6915549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 6932081 - 6932027
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggagg 60  Q
    ||||||||||||||||||||||| ||| |||||||||||||  ||||||| ||||    
T  6932081 caacaccttccttctttacaaaaactggagattagtgattgccacaagtttgagg 6932027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 6734161 - 6734108
Alignment:
Q  5 acaacaccttccttctttacaaaatctgcagattagtgattgtaacaagttgga 58  Q
    ||||||||||||||||||||| || ||| ||||||| ||||| |||||||||||    
T  6734161 acaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6734108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6781502 - 6781555
Alignment:
Q  5 acaacaccttccttctttacaaaatctgcagattagtgattgtaacaagttgga 58  Q
    ||||||||||||||||||||| || ||| ||||||| ||||| |||||||||||    
T  6781502 acaacaccttccttctttacagaaactggagattagagattgcaacaagttgga 6781555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 444
Target Start/End: Original strand, 6723536 - 6723652
Alignment:
Q  328 aggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttcttt 427  Q
    |||||| ||||||||||| ||  |||||||||||  ||||| |||| |||    | |||||||| ||||||||  | |||||||||||||||||||| ||    
T  6723536 aggaatggttatgtcttgaaggtttccctttgctacaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttcatt 6723635  T
Q  428 acaaaaactgaagatta 444  Q
     |||||| || ||||||    
T  6723636 gcaaaaattggagatta 6723652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 6840354 - 6840476
Alignment:
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggct---ctgcctcaacaccttcct 422  Q
    |||| ||| ||| ||||||| || ||| |||||||||||| ||||||  |||   || |||||||||||||||| |||    |||||| |||||||| ||    
T  6840354 ggagaaatggttttgtcttgaagggtttcctttgcttaaaaagatttctataagaaaatgtcccaaattgaaaaaggcagtgctgcctaaacaccttact 6840453  T
Q  423 tctttacaaaaactgaagattag 445  Q
    ||||||||||| ||| |||||||    
T  6840454 tctttacaaaagctggagattag 6840476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 6881088 - 6880972
Alignment:
Q  328 aggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttcttt 427  Q
    |||||| ||||||||||| ||  |||||||||||| || || |||| |||    | |||||||| |||||||| || || ||||||||||| ||||||||    
T  6881088 aggaatggttatgtcttgaaggtttccctttgcttcaaaagctttgtataaaacattgtcccaagttgaaaagtgcccttcctcaacacctcccttcttt 6880989  T
Q  428 acaaaaactgaagatta 444  Q
     |||||| || ||||||    
T  6880988 gcaaaaattggagatta 6880972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 8570500 - 8570552
Alignment:
Q  8 acaccttccttctttacaaaatctgcagattagtgattgtaacaagttggagg 60  Q
    ||||||||||||||||||||| ||| |||| |||||||| || ||||||||||    
T  8570500 acaccttccttctttacaaaaactggagatcagtgattgcaagaagttggagg 8570552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 6450312 - 6450363
Alignment:
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaa 163  Q
    |||||||| || |||||||||  |||||||||||||||||||||||| ||||    
T  6450312 attgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaa 6450363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 6592864 - 6592947
Alignment:
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    |||||||| | |||||||| |  ||||||||||||||||||||||| |||||  || |||||| ||||||| |  |||||||||    
T  6592864 attgtcccaagttgaaaagagccctgcctcaacaccttccttctttgcaaaaattggagattactgattgccaagagttggagg 6592947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 6730240 - 6730291
Alignment:
Q  112 attgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaa 163  Q
    |||||||| || |||||||||  |||||||||||||||||||||||| ||||    
T  6730240 attgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaa 6730291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 7748497 - 7748450
Alignment:
Q  270 ctgcctcaacaccttccttctttacaaaaactgaagattagtgattgc 317  Q
    ||||||||||||||||||||||| |||||| || |||||| |||||||    
T  7748497 ctgcctcaacaccttccttctttgcaaaaattggagattattgattgc 7748450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 6723590 - 6723660
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgc 317  Q
    |||||||| | ||||||||  | |||||||||||||||||||| || |||||| || |||||| |||||||    
T  6723590 attgtcccaagttgaaaagttccctgcctcaacaccttccttcattgcaaaaattggagattattgattgc 6723660  T

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Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 6881034 - 6880964
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgc 317  Q
    |||||||| | |||||||| || || ||||||||||| |||||||| |||||| || |||||| |||||||    
T  6881034 attgtcccaagttgaaaagtgcccttcctcaacacctcccttctttgcaaaaattggagattattgattgc 6880964  T

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Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 6942422 - 6942368
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggagg 60  Q
    ||||||||||||||||||||||| ||| ||||| || |||| |||||| ||||||    
T  6942422 caacaccttccttctttacaaaaactgaagattggttattgcaacaagatggagg 6942368  T

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Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 5297240 - 5297195
Alignment:
Q  405 ctgcctcaacaccttccttctttacaaaaactgaagattagagatt 450  Q
    ||||||||||| ||||||||||| |||||| |||||||||| ||||    
T  5297240 ctgcctcaacatcttccttctttgcaaaaattgaagattagtgatt 5297195  T

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Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 5297240 - 5297180
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    ||||||||||| ||||||||||| |||||  || |||||||||||||| |  |||||||||    
T  5297240 ctgcctcaacatcttccttctttgcaaaaattgaagattagtgattgccaagagttggagg 5297180  T

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Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 6734439 - 6734343
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagattt 102  Q
    ||||| |||||||||||||||||  || | ||||||| ||| ||  |||||||||||| |||||| |||| || ||||| ||  ||||||||| |||    
T  6734439 caacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagcttt 6734343  T

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Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 6781224 - 6781316
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagag 98  Q
    ||||| |||||||||||||||||  || | ||||||| ||| ||  |||||||||||| |||||| |||| || ||||| ||  |||||||||    
T  6781224 caacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagag 6781316  T

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Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 7748518 - 7748458
Alignment:
Q  384 tgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagatta 444  Q
    ||||| || ||||||||  | ||||||||||||||||||||||| |||||| || ||||||    
T  7748518 tgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagatta 7748458  T

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Target: scaffold0425 (Bit Score: 129; Significance: 1e-66; HSPs: 5)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 52 - 328
Target Start/End: Original strand, 9085 - 9361
Alignment:
Q  52 agttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgtcccgaattgaaaagggttctgcctcaacaccttcc 151  Q
    |||||||||||| |||||| |||| || ||||| ||  ||||||||| |||| ||||   ||||| |  |||| ||||||||  |||||||||| |||||    
T  9085 agttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttcc 9184  T
Q  152 ttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttccatatccgattgt 251  Q
    |||||||| |||| ||| ||| | | |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||| |||||    
T  9185 ttctttactaaatttgcggatcaattattgcaacgagttggaggaatggttatgccttggagagtttcctttgcttaacgagttttctatatccaattgt 9284  T
Q  252 cccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttgga 328  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||   |||| ||||||||||||||||||    
T  9285 cccgaattgaaaagggctctgccacaacaccttccttctttacaaaaattgttcattaatgattgcaacaagttgga 9361  T

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Target: scaffold0425; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 9174 - 9361
Alignment:
Q  6 caacaccttccttctttacaaaatctgcagattagtgattgtaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttcca 105  Q
    ||||| ||||||||||||| |||| ||| ||| | | |||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||| |||| |    
T  9174 caacatcttccttctttactaaatttgcggatcaattattgcaacgagttggaggaatggttatgccttggagagtttcctttgcttaacgagttttcta 9273  T
Q  106 tatccgattgtcccgaattgaaaagggttctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttgga 193  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||   |||| ||||||||||||||||||    
T  9274 tatccaattgtcccgaattgaaaagggctctgccacaacaccttccttctttacaaaaattgttcattaatgattgcaacaagttgga 9361  T

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Target: scaffold0425; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 135 - 434
Target Start/End: Original strand, 9033 - 9332
Alignment:
Q  135 ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagaga 234  Q
    ||||||||||| |||||||||||||||||  ||   |||  || ||||||  |||||||||||| |||||| |||| || ||||| ||  |||||||||     
T  9033 ctgcctcaacatcttccttctttacaaaaattgattatttatggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagc 9132  T
Q  235 tttccatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggaggaatt 334  Q
    |||| ||||   ||||| |  |||| |||||||   |||||||||| ||||||||||||| |||  ||  ||| | | |||||||| ||||||||||||     
T  9133 tttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttccttctttactaaatttgcggatcaattattgcaacgagttggaggaatg 9232  T
Q  335 gttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaa 434  Q
    |||||| ||||||||||| ||||||||||| ||| |||  |||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  9233 gttatgccttggagagtttcctttgcttaacgagttttctatatccaattgtcccgaattgaaaagggctctgccacaacaccttccttctttacaaaaa 9332  T

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Target: scaffold0425; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 429
Target Start/End: Original strand, 9010 - 9192
Alignment:
Q  247 attgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggaggaattgttatgtcttgg 346  Q
    |||||||  ||||||||||  | ||||||||||| |||||||||||||||||| |||  |||  || ||||||  |||||||||||| |||||||||||     
T  9010 attgtcctaaattgaaaagcaccctgcctcaacatcttccttctttacaaaaattgattatttatggttgcaaagagttggaggaatggttatgtcttga 9109  T
Q  347 agagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggctctgcctcaacaccttccttctttac 429  Q
    || ||| | ||  ||||||||| |||  ||||   | ||| | ||||| |||||||   |||||||||| |||||||||||||    
T  9110 agggtttctttctcttaaagagctttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttccttctttac 9192  T

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Target: scaffold0425; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 9012 - 9062
Alignment:
Q  384 tgtcccaaattgaaaagggctctgcctcaacaccttccttctttacaaaaa 434  Q
    ||||| |||||||||||  | ||||||||||| ||||||||||||||||||    
T  9012 tgtcctaaattgaaaagcaccctgcctcaacatcttccttctttacaaaaa 9062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1643 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold1643
Description:

Target: scaffold1643; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 664 - 602
Alignment:
Q  268 ctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  664 ctctgcctcaacaccttccttttttacaaaaactgaatattactgattgcaacaagatggagg 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1643; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 444
Target Start/End: Complemental strand, 744 - 623
Alignment:
Q  326 ggaggaattgttatgtcttggagagttccctttgcttaaagagatttggatattcaagtgtcccaaattgaaaagggc---tctgcctcaacaccttcct 422  Q
    |||||||| ||| |||| || || ||| ||||||||||||||| ||   |||   ||||||||||||||  |||||||   |||||||||||||||||||    
T  744 ggaggaatggttgtgtcctgaagggtttcctttgcttaaagagcttactataagaaagtgtcccaaattagaaagggccactctgcctcaacaccttcct 645  T
Q  423 tctttacaaaaactgaagatta 444  Q
    | ||||||||||||||| ||||    
T  644 tttttacaaaaactgaatatta 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1643; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 663 - 602
Alignment:
Q  134 tctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagttggagg 195  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||||||||||| ||||||    
T  663 tctgcctcaacaccttccttttttacaaaaactgaatattactgattgcaacaagatggagg 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0958 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0958
Description:

Target: scaffold0958; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 1317 - 1390
Alignment:
Q  257 attgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtgattgcaacaagttggagg 330  Q
    |||||||||||| || |||| |||||||||||||||||||| | || | ||||| || |||  |||||||||||    
T  1317 attgaaaagggccctacctcgacaccttccttctttacaaatattggatattagcgagtgctgcaagttggagg 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0958; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Original strand, 1317 - 1357
Alignment:
Q  392 attgaaaagggctctgcctcaacaccttccttctttacaaa 432  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1317 attgaaaagggccctacctcgacaccttccttctttacaaa 1357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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