View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0692_low_1 (Length: 590)

Name: NF0692_low_1
Description: NF0692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0692_low_1
NF0692_low_1
[»] chr7 (45 HSPs)
chr7 (14-284)||(11272531-11272811)
chr7 (286-534)||(20065649-20065901)
chr7 (209-285)||(28155598-28155673)
chr7 (209-285)||(19213831-19213912)
chr7 (209-246)||(21880180-21880217)
chr7 (247-287)||(5409769-5409809)
chr7 (229-285)||(6490780-6490835)
chr7 (252-287)||(23128601-23128636)
chr7 (209-287)||(35861992-35862072)
chr7 (247-285)||(38134335-38134373)
chr7 (248-285)||(18212973-18213010)
chr7 (209-246)||(25481930-25481967)
chr7 (209-285)||(30813840-30813916)
chr7 (248-285)||(40131939-40131976)
chr7 (247-287)||(9778586-9778626)
chr7 (206-246)||(21864833-21864873)
chr7 (249-285)||(29763129-29763165)
chr7 (210-245)||(7197292-7197327)
chr7 (209-240)||(18039027-18039058)
chr7 (209-240)||(21560531-21560562)
chr7 (209-240)||(24339670-24339701)
chr7 (209-240)||(27945069-27945100)
chr7 (229-285)||(29812598-29812658)
chr7 (247-285)||(598289-598327)
chr7 (209-285)||(3991352-3991432)
chr7 (235-285)||(21568561-21568610)
chr7 (247-285)||(21864889-21864927)
chr7 (247-285)||(23751980-23752018)
chr7 (247-285)||(24105759-24105797)
chr7 (247-285)||(24339734-24339772)
chr7 (247-285)||(28973881-28973919)
chr7 (235-285)||(32093954-32094004)
chr7 (247-285)||(38804489-38804527)
chr7 (247-285)||(43027404-43027442)
chr7 (209-246)||(8234174-8234211)
chr7 (209-246)||(15680837-15680874)
chr7 (211-240)||(25822685-25822714)
chr7 (209-246)||(25956473-25956510)
chr7 (247-284)||(32287404-32287441)
chr7 (209-246)||(33994240-33994277)
chr7 (212-245)||(40287352-40287385)
chr7 (249-285)||(1433542-1433578)
chr7 (211-284)||(9482964-9483040)
chr7 (249-285)||(21880235-21880271)
chr7 (256-284)||(49107895-49107923)
[»] chr5 (48 HSPs)
chr5 (209-287)||(6247650-6247731)
chr5 (209-285)||(15884016-15884096)
chr5 (209-286)||(6326252-6326328)
chr5 (209-285)||(24906252-24906332)
chr5 (209-286)||(10298597-10298670)
chr5 (209-245)||(21191051-21191087)
chr5 (247-287)||(38464311-38464351)
chr5 (247-286)||(14873603-14873642)
chr5 (247-285)||(17123128-17123166)
chr5 (247-285)||(35017124-35017162)
chr5 (229-286)||(39695950-39696005)
chr5 (209-283)||(16203746-16203826)
chr5 (248-285)||(21576685-21576722)
chr5 (209-246)||(21576739-21576776)
chr5 (251-287)||(15086563-15086599)
chr5 (247-283)||(21190998-21191034)
chr5 (249-285)||(22423764-22423800)
chr5 (209-245)||(33178053-33178089)
chr5 (247-287)||(43564962-43565002)
chr5 (250-285)||(2548464-2548499)
chr5 (229-279)||(6035541-6035592)
chr5 (250-285)||(14674333-14674368)
chr5 (206-241)||(15382504-15382539)
chr5 (209-240)||(21542058-21542089)
chr5 (235-286)||(27932305-27932355)
chr5 (250-285)||(36838615-36838650)
chr5 (250-285)||(39698636-39698671)
chr5 (232-283)||(41995531-41995581)
chr5 (247-285)||(7677797-7677835)
chr5 (209-243)||(8420055-8420089)
chr5 (249-287)||(11596396-11596434)
chr5 (247-285)||(19820328-19820366)
chr5 (209-239)||(21351906-21351936)
chr5 (248-282)||(39268541-39268575)
chr5 (249-283)||(43001888-43001922)
chr5 (248-281)||(4105341-4105374)
chr5 (250-283)||(18421779-18421812)
chr5 (209-246)||(28588668-28588705)
chr5 (209-246)||(43564909-43564946)
chr5 (209-245)||(2548415-2548451)
chr5 (248-284)||(3966596-3966632)
chr5 (251-287)||(6770621-6770657)
chr5 (249-285)||(9929684-9929720)
chr5 (229-285)||(19429491-19429546)
chr5 (210-246)||(30502382-30502418)
chr5 (210-246)||(30542725-30542761)
chr5 (247-287)||(39342523-39342563)
chr5 (209-245)||(42893388-42893424)
[»] chr1 (60 HSPs)
chr1 (209-287)||(22881565-22881647)
chr1 (209-285)||(35702542-35702619)
chr1 (209-287)||(24334662-24334736)
chr1 (209-286)||(13436486-13436563)
chr1 (209-285)||(35919226-35919307)
chr1 (209-286)||(46940747-46940824)
chr1 (209-246)||(19058850-19058887)
chr1 (209-246)||(51410053-51410090)
chr1 (247-283)||(1486646-1486682)
chr1 (209-245)||(18337357-18337393)
chr1 (206-246)||(46348377-46348417)
chr1 (250-288)||(21365989-21366027)
chr1 (249-287)||(22947813-22947851)
chr1 (248-286)||(37598913-37598951)
chr1 (229-287)||(42325623-42325680)
chr1 (247-285)||(47989589-47989627)
chr1 (209-246)||(1815285-1815322)
chr1 (209-285)||(2218267-2218347)
chr1 (209-246)||(22515881-22515918)
chr1 (206-239)||(28273089-28273122)
chr1 (210-247)||(31672888-31672925)
chr1 (209-246)||(38078655-38078692)
chr1 (209-246)||(40258927-40258964)
chr1 (209-246)||(41877464-41877501)
chr1 (211-244)||(42359445-42359478)
chr1 (247-287)||(9828136-9828176)
chr1 (247-287)||(40917841-40917881)
chr1 (247-283)||(42359391-42359427)
chr1 (206-246)||(52903274-52903314)
chr1 (209-287)||(2288123-2288198)
chr1 (209-240)||(6612171-6612202)
chr1 (248-287)||(15765840-15765879)
chr1 (250-285)||(22515827-22515862)
chr1 (209-240)||(24577186-24577217)
chr1 (209-283)||(25452108-25452179)
chr1 (247-286)||(34741927-34741966)
chr1 (211-246)||(37598861-37598896)
chr1 (209-240)||(47989525-47989556)
chr1 (249-283)||(16297223-16297257)
chr1 (247-285)||(16812637-16812675)
chr1 (247-285)||(27965940-27965978)
chr1 (209-284)||(28663636-28663715)
chr1 (229-284)||(5376448-5376500)
chr1 (249-286)||(7918153-7918190)
chr1 (247-288)||(9690210-9690251)
chr1 (248-285)||(18556385-18556422)
chr1 (209-238)||(21378606-21378635)
chr1 (209-246)||(21620983-21621020)
chr1 (247-288)||(30359446-30359487)
chr1 (248-285)||(36878548-36878585)
chr1 (247-287)||(5898204-5898244)
chr1 (249-285)||(9630561-9630597)
chr1 (249-293)||(16164236-16164280)
chr1 (209-286)||(17705545-17705617)
chr1 (209-245)||(18190103-18190139)
chr1 (251-287)||(29144318-29144354)
chr1 (209-245)||(30749868-30749904)
chr1 (209-245)||(30771319-30771355)
chr1 (248-284)||(45534131-45534167)
chr1 (249-285)||(48450550-48450586)
[»] chr6 (50 HSPs)
chr6 (206-290)||(7938141-7938224)
chr6 (209-274)||(21924902-21924966)
chr6 (209-285)||(9911482-9911559)
chr6 (208-246)||(16388211-16388249)
chr6 (209-246)||(28152126-28152163)
chr6 (209-246)||(28715323-28715360)
chr6 (209-246)||(34595162-34595199)
chr6 (249-289)||(4878025-4878065)
chr6 (209-245)||(7977825-7977861)
chr6 (235-286)||(8805523-8805574)
chr6 (248-287)||(17327588-17327627)
chr6 (209-282)||(9025448-9025525)
chr6 (247-285)||(32839571-32839609)
chr6 (209-246)||(6898275-6898312)
chr6 (209-246)||(26402674-26402711)
chr6 (209-246)||(32978893-32978930)
chr6 (249-285)||(3209482-3209518)
chr6 (247-283)||(26178620-26178656)
chr6 (209-284)||(31959187-31959268)
chr6 (213-284)||(1700384-1700454)
chr6 (248-287)||(8365446-8365485)
chr6 (211-246)||(8776967-8777002)
chr6 (248-287)||(10339052-10339091)
chr6 (209-240)||(10770674-10770705)
chr6 (209-240)||(16766725-16766756)
chr6 (249-284)||(17341622-17341657)
chr6 (207-246)||(23771604-23771643)
chr6 (209-247)||(426507-426545)
chr6 (251-285)||(7723199-7723233)
chr6 (247-285)||(8714072-8714110)
chr6 (249-287)||(10649371-10649409)
chr6 (250-284)||(17841530-17841564)
chr6 (247-285)||(34595215-34595253)
chr6 (209-246)||(403858-403895)
chr6 (249-286)||(426477-426514)
chr6 (209-246)||(4877971-4878008)
chr6 (233-282)||(8389411-8389459)
chr6 (250-287)||(8776906-8776943)
chr6 (211-240)||(9107370-9107399)
chr6 (209-238)||(9522919-9522948)
chr6 (209-246)||(17841583-17841620)
chr6 (209-246)||(27904030-27904067)
chr6 (247-284)||(31385011-31385048)
chr6 (207-240)||(34197137-34197170)
chr6 (249-285)||(4388163-4388199)
chr6 (249-285)||(5732474-5732510)
chr6 (209-245)||(7265588-7265624)
chr6 (209-241)||(7801155-7801187)
chr6 (252-292)||(20576566-20576606)
chr6 (248-284)||(27903963-27903999)
[»] chr4 (48 HSPs)
chr4 (218-286)||(30094066-30094133)
chr4 (209-286)||(30298975-30299049)
chr4 (209-286)||(30327843-30327917)
chr4 (209-270)||(6879435-6879496)
chr4 (209-285)||(42640557-42640643)
chr4 (209-246)||(12797332-12797369)
chr4 (209-246)||(16073422-16073459)
chr4 (248-289)||(16184913-16184954)
chr4 (209-284)||(17425348-17425420)
chr4 (247-286)||(5775303-5775342)
chr4 (209-244)||(21945531-21945566)
chr4 (247-285)||(23292926-23292964)
chr4 (248-285)||(715545-715582)
chr4 (248-285)||(752871-752908)
chr4 (250-287)||(3064866-3064903)
chr4 (209-246)||(23292980-23293017)
chr4 (206-239)||(28000743-28000776)
chr4 (209-246)||(28964242-28964279)
chr4 (209-246)||(29205472-29205509)
chr4 (209-246)||(49431054-49431091)
chr4 (209-246)||(54580017-54580054)
chr4 (247-287)||(11596295-11596335)
chr4 (209-288)||(20633510-20633593)
chr4 (247-287)||(53381528-53381568)
chr4 (249-284)||(4383449-4383484)
chr4 (247-286)||(40784034-40784073)
chr4 (247-285)||(12895214-12895252)
chr4 (249-287)||(17876249-17876287)
chr4 (249-287)||(18513173-18513211)
chr4 (209-283)||(22440559-22440631)
chr4 (248-282)||(28084606-28084640)
chr4 (247-285)||(28470446-28470484)
chr4 (216-246)||(34306798-34306828)
chr4 (247-285)||(36635411-36635449)
chr4 (209-246)||(482232-482269)
chr4 (209-246)||(2361969-2362006)
chr4 (209-246)||(4157177-4157214)
chr4 (209-246)||(4157464-4157501)
chr4 (209-246)||(8423712-8423749)
chr4 (209-285)||(10499227-10499301)
chr4 (250-287)||(16073478-16073515)
chr4 (207-240)||(16303266-16303299)
chr4 (248-285)||(28964188-28964225)
chr4 (248-285)||(29205550-29205587)
chr4 (248-284)||(5922532-5922568)
chr4 (249-285)||(18844423-18844459)
chr4 (206-242)||(38847010-38847046)
chr4 (249-285)||(47264080-47264116)
[»] chr8 (36 HSPs)
chr8 (209-285)||(25566869-25566949)
chr8 (209-285)||(4948680-4948754)
chr8 (209-285)||(31514901-31514973)
chr8 (209-286)||(8343000-8343087)
chr8 (229-285)||(13436910-13436964)
chr8 (209-285)||(24669461-24669536)
chr8 (249-285)||(36450694-36450730)
chr8 (247-286)||(8343408-8343447)
chr8 (209-248)||(24613548-24613587)
chr8 (251-285)||(11833935-11833969)
chr8 (247-285)||(16641909-16641947)
chr8 (209-246)||(20873097-20873134)
chr8 (209-246)||(30271249-30271286)
chr8 (209-246)||(40332219-40332256)
chr8 (251-287)||(4673352-4673388)
chr8 (235-287)||(27213595-27213646)
chr8 (247-287)||(29510231-29510271)
chr8 (229-273)||(17468457-17468503)
chr8 (250-285)||(18964274-18964309)
chr8 (207-246)||(22204667-22204706)
chr8 (211-246)||(36450748-36450783)
chr8 (208-242)||(15023255-15023289)
chr8 (247-285)||(15816058-15816096)
chr8 (247-285)||(17751737-17751775)
chr8 (247-285)||(17760724-17760762)
chr8 (209-243)||(22596022-22596056)
chr8 (247-285)||(22652068-22652106)
chr8 (247-285)||(24858097-24858135)
chr8 (209-247)||(30077380-30077418)
chr8 (247-285)||(39820509-39820547)
chr8 (209-246)||(18407747-18407784)
chr8 (209-246)||(31557024-31557061)
chr8 (249-286)||(38487156-38487193)
chr8 (229-285)||(9383029-9383085)
chr8 (247-283)||(16987994-16988030)
chr8 (248-280)||(31109463-31109495)
[»] chr2 (47 HSPs)
chr2 (206-287)||(20539630-20539708)
chr2 (209-247)||(19536390-19536428)
chr2 (213-283)||(42832234-42832303)
chr2 (209-246)||(2438713-2438750)
chr2 (206-284)||(20473347-20473427)
chr2 (209-246)||(21624295-21624332)
chr2 (247-287)||(37419835-37419875)
chr2 (211-246)||(15972903-15972938)
chr2 (247-285)||(22084756-22084794)
chr2 (209-246)||(5040762-5040799)
chr2 (248-285)||(26769604-26769641)
chr2 (208-245)||(27460064-27460101)
chr2 (209-246)||(30404844-30404881)
chr2 (206-247)||(34691798-34691839)
chr2 (206-247)||(34714210-34714251)
chr2 (210-285)||(44635527-44635612)
chr2 (247-283)||(2438661-2438697)
chr2 (209-245)||(18421991-18422027)
chr2 (250-285)||(18420363-18420398)
chr2 (246-285)||(34221463-34221502)
chr2 (229-284)||(5473376-5473433)
chr2 (247-285)||(11223793-11223831)
chr2 (209-239)||(11223864-11223894)
chr2 (235-285)||(12748737-12748786)
chr2 (247-285)||(18840953-18840991)
chr2 (209-243)||(37559005-37559039)
chr2 (247-285)||(38117099-38117137)
chr2 (235-285)||(41843516-41843565)
chr2 (207-240)||(4882696-4882729)
chr2 (209-246)||(5367220-5367257)
chr2 (209-246)||(12224251-12224288)
chr2 (206-239)||(14996224-14996257)
chr2 (209-246)||(18841007-18841044)
chr2 (249-286)||(20242666-20242703)
chr2 (247-284)||(23354582-23354619)
chr2 (209-246)||(28596497-28596534)
chr2 (212-245)||(33884082-33884115)
chr2 (248-285)||(34784911-34784948)
chr2 (248-285)||(42511322-42511359)
chr2 (209-246)||(43585999-43586036)
chr2 (212-240)||(974778-974806)
chr2 (248-284)||(3444827-3444863)
chr2 (249-285)||(10535685-10535721)
chr2 (247-283)||(19942346-19942382)
chr2 (209-245)||(20242722-20242758)
chr2 (247-283)||(23354926-23354962)
chr2 (251-283)||(36756275-36756307)
[»] scaffold0004 (2 HSPs)
scaffold0004 (209-284)||(123656-123731)
scaffold0004 (236-289)||(92893-92945)
[»] scaffold0083 (1 HSPs)
scaffold0083 (209-246)||(45524-45561)
[»] chr3 (48 HSPs)
chr3 (209-246)||(25775537-25775574)
chr3 (206-246)||(8383282-8383322)
chr3 (209-285)||(13414497-13414572)
chr3 (251-285)||(11252061-11252095)
chr3 (247-285)||(20503546-20503584)
chr3 (249-287)||(28812609-28812647)
chr3 (247-285)||(34185052-34185090)
chr3 (209-246)||(10954980-10955017)
chr3 (209-246)||(16000010-16000047)
chr3 (209-246)||(20503493-20503530)
chr3 (225-287)||(40052370-40052433)
chr3 (207-283)||(40150527-40150604)
chr3 (247-288)||(40993272-40993313)
chr3 (248-289)||(41961575-41961616)
chr3 (209-246)||(55401103-55401140)
chr3 (249-285)||(4990912-4990948)
chr3 (206-246)||(7171526-7171566)
chr3 (236-284)||(8789489-8789536)
chr3 (247-287)||(14979230-14979270)
chr3 (206-246)||(26492199-26492239)
chr3 (209-245)||(51206348-51206384)
chr3 (209-244)||(8587017-8587052)
chr3 (209-244)||(8593165-8593200)
chr3 (250-285)||(8842413-8842448)
chr3 (209-285)||(11610549-11610628)
chr3 (209-240)||(28918029-28918060)
chr3 (250-285)||(55401159-55401194)
chr3 (209-247)||(7928478-7928516)
chr3 (206-240)||(14216917-14216951)
chr3 (206-240)||(14223046-14223080)
chr3 (207-245)||(15505785-15505823)
chr3 (206-240)||(15796294-15796328)
chr3 (247-285)||(27505332-27505370)
chr3 (209-246)||(3865702-3865739)
chr3 (209-270)||(10268457-10268517)
chr3 (248-285)||(21211376-21211413)
chr3 (229-282)||(21367330-21367382)
chr3 (211-240)||(34185123-34185152)
chr3 (247-284)||(34910398-34910435)
chr3 (209-246)||(35994733-35994769)
chr3 (209-246)||(40993329-40993366)
chr3 (247-283)||(4987222-4987258)
chr3 (256-284)||(5339197-5339225)
chr3 (206-238)||(17005621-17005653)
chr3 (249-285)||(21861658-21861694)
chr3 (209-237)||(26508138-26508166)
chr3 (247-287)||(49651714-49651754)
chr3 (247-287)||(52369868-52369908)
[»] scaffold0652 (2 HSPs)
scaffold0652 (211-246)||(456-491)
scaffold0652 (247-284)||(403-440)
[»] scaffold0475 (1 HSPs)
scaffold0475 (248-286)||(3390-3428)
[»] scaffold0793 (1 HSPs)
scaffold0793 (248-285)||(4821-4858)
[»] scaffold0168 (2 HSPs)
scaffold0168 (250-287)||(21372-21409)
scaffold0168 (250-287)||(21243-21280)
[»] scaffold0050 (1 HSPs)
scaffold0050 (209-246)||(70306-70343)
[»] scaffold0027 (1 HSPs)
scaffold0027 (209-285)||(46710-46776)
[»] scaffold0053 (1 HSPs)
scaffold0053 (206-246)||(8823-8863)
[»] scaffold0019 (1 HSPs)
scaffold0019 (247-287)||(71817-71857)
[»] scaffold0003 (2 HSPs)
scaffold0003 (247-287)||(236912-236952)
scaffold0003 (247-285)||(241686-241724)
[»] scaffold0512 (2 HSPs)
scaffold0512 (250-285)||(4976-5011)
scaffold0512 (218-246)||(5030-5058)
[»] scaffold0025 (1 HSPs)
scaffold0025 (209-240)||(23798-23829)
[»] scaffold0057 (1 HSPs)
scaffold0057 (249-287)||(24119-24157)
[»] scaffold0227 (1 HSPs)
scaffold0227 (248-285)||(15053-15090)
[»] scaffold0049 (1 HSPs)
scaffold0049 (209-262)||(63801-63853)
[»] scaffold0136 (1 HSPs)
scaffold0136 (250-286)||(3777-3813)
[»] scaffold0122 (1 HSPs)
scaffold0122 (206-246)||(8035-8074)
[»] scaffold0021 (1 HSPs)
scaffold0021 (209-237)||(130510-130538)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 14 - 284
Target Start/End: Complemental strand, 11272811 - 11272531
Alignment:
Q  14 agaaggagtttcttgcagaagtatagacactagagataatgtttgcaatcgctgacttccaagggatccatctgttattaaacctagcagcatttcttgc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11272811 agaaggagtttcttgcagaagtatagacactagagataatgtttgctatcgctgacttccaagggatccatctattattaaacctagcagcatttcttgc 11272712  T
Q  114 ctgccatatcacattgaaaacattgattagggcagcttgcattactagcttgcactgagacgccgacacaactgataatttgnnnnnnntcacatataat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||    
T  11272711 ctgccatatcacattgaaaacattgattagggcagcttgcattactagcttgcactgagacgccgacacaactgataatttg-aaaaaatcacatataat 11272613  T
Q  214 tcagtgtaattacaa-----------gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11272612 tcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgcgggacacgcctaatccgaggagtatctgtgcttcata 11272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 286 - 534
Target Start/End: Original strand, 20065649 - 20065901
Alignment:
Q  286 gtattgaccttcggcagagggtggttgtccaaaattaataacatattttgctaagaattgattttttaagcactggacagttcagtaccaatatatatgc 385  Q
    |||||||||||| ||||| |||| ||||||||||||| ||| || |||   ||| |||| | |||| ||| |||||| |||||| || |||| |||||||    
T  20065649 gtattgaccttcagcagaaggtgattgtccaaaattactaatatgtttccataataattaagtttt-aagtactggagagttcattatcaatgtatatgc 20065747  T
Q  386 atgaatacatc----tgtttttgagatgcacaatctatcacacttttgagagaaatttgcattccaaattattatgttggtctttgtcaaaaaa-taaga 480  Q
    |||| ||| |     |||| |||||||||| || |||||||||||||||| ||| |||| |||  |  |||| ||||| || ||| |||||||| | | |    
T  20065748 atgagtacgtaactttgttcttgagatgcataacctatcacacttttgagggaactttgaatttaacgttatcatgttagtttttctcaaaaaaattaaa 20065847  T
Q  481 acatcatcaaattagtaacatattcacattaactttgaaaatgaagatccacca 534  Q
    |||| ||||||||||||||||||||| |||||||| |||||| |||||||||||    
T  20065848 acattatcaaattagtaacatattcaaattaacttggaaaattaagatccacca 20065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 28155598 - 28155673
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||| |||||||||||    
T  28155598 ataattcggtgtaattacaagtgtcggtgtcggacac-caggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 19213831 - 19213912
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg--cgggaca---cgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||| |||||||| |||||||||||||||||||||||  |||||||   |||||||||||||||||||| |||||||||||    
T  19213831 ataatgcagtgtaaatacaagtgtcggtgtcggacacgaccgggacacgccgcctaatccgaggagtgtccgtgcttcatag 19213912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21880180 - 21880217
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21880180 ataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 5409809 - 5409769
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  5409809 cgggacacgcctaatccgaggagtgtccgtgcttcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 6490780 - 6490835
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||    
T  6490780 gtgtcggtgtccgacac-cgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 23128636 - 23128601
Alignment:
Q  252 cacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||||||||||||||    
T  23128636 cacgcctaatccgaggagtgtctgtgcttcataggt 23128601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 35861992 - 35862072
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg---gacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| |||||||  ||||||| ||||||   |||||| || ||||||||||||||||||||||| |||||||||||||    
T  35861992 ataattcaatgtaattgtaagtgtctgtgtcgtcggacacgagg-acacgcctaatccgaggagtgtccgtgcttcataggt 35862072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 38134373 - 38134335
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  38134373 cgggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 18213010 - 18212973
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18213010 gggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25481930 - 25481967
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25481930 ataattcagtgtaattacaagtgttggtgtcggacacg 25481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 30813840 - 30813916
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||| |||| | ||||| ||||  | | ||||||||||||||||||||||| |||||||||||    
T  30813840 ataattcagtgtaattacaggtgttgcgtgtccgacat-cagaacacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 40131976 - 40131939
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| |||||||||||||||||||||||||||||    
T  40131976 gggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 9778586 - 9778626
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  9778586 cgggacacgcctaatccaaggagtgtccgtgcttcataggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 21864833 - 21864873
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  21864833 catataatttagtgtaattacaagtgtcgctgtcggacacg 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 29763165 - 29763129
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29763165 ggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 7197327 - 7197292
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 18039027 - 18039058
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  18039027 ataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 21560531 - 21560562
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  21560531 ataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 24339670 - 24339701
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  24339670 ataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 27945069 - 27945100
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  27945069 ataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 29812658 - 29812598
Alignment:
Q  229 gtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||     |||||||||||||||||||| |||||| |||||||||||    
T  29812658 gtgtcggtgtcggacaccgacacgggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 598289 - 598327
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  598289 cgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 3991352 - 3991432
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg--gacacgc--gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||| |||||||||||||||||||||  |   ||   |||||||||||||||||||||||||| | |||||||||    
T  3991352 ataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 21568610 - 21568561
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||||||||    
T  21568610 gtgtcggacac-cgggacatgcttaatctgaggagtgtctgtgcttcatag 21568561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 21864889 - 21864927
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  21864889 cgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 23751980 - 23752018
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  23751980 cgggacacgcctaatccgataagtgtctgtgcttcatag 23752018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 24105759 - 24105797
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  24105759 cgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 24339734 - 24339772
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  24339734 cgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 28973919 - 28973881
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  28973919 cgggacacgcctaatccgaggtgtgtccgtgcttcatag 28973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 32094004 - 32093954
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||| |||||  |||||||||||||||||||||||||  |||||||||||    
T  32094004 gtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 38804527 - 38804489
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  38804527 cgggacatgcctaatccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 43027442 - 43027404
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  43027442 cgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 8234174 - 8234211
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  8234174 ataattcagtgtagttacaagtgccggtgtcggacacg 8234211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 15680837 - 15680874
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  15680837 ataatttagtgtaattataagtgtcggtgtcggacacg 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Original strand, 25822685 - 25822714
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25956473 - 25956510
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  25956473 ataattcaatgtaatcacaagtgtcggtgtcggacacg 25956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 32287441 - 32287404
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  32287441 cgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 33994240 - 33994277
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  33994240 ataattcagtgcaattacaagtgtcggtgtcagacacg 33994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 40287385 - 40287352
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||||||||| ||||||||    
T  40287385 attcagtgtaattacaagtgtcggtatcggacac 40287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 1433542 - 1433578
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  1433542 ggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 9482964 - 9483040
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||| | ||||||||||||||| ||    ||||||||| ||||| |||| |||||| ||||||||||    
T  9482964 aattcagtgtaattatatgtgtcggtgtcggacgcgacaccgggacacg-ctaatacgagaagtgtccgtgcttcata 9483040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 21880235 - 21880271
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||| |||||| |||||||||||    
T  21880235 ggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 49107895 - 49107923
Alignment:
Q  256 cctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||    
T  49107895 cctaatccgaggagtgtctgtgcttcata 49107923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 6247650 - 6247731
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg---cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||| ||||||||||||||||||||    
T  6247650 ataattcagtgtaattacaagtgtcggtgtcggacacggcacgggacacacctaatccgagaagtgtctgtgcttcataggt 6247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 15884016 - 15884096
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||||||| |||||||    
T  15884016 ataattcagtgtaattacaagtgtcggtgtcggacacgacactggaacacgcctaatccgaggagtgtctgtgtttcatag 15884096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 6326328 - 6326252
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||| | ||||||||| ||| ||||||||||| |||| |||||| ||||||||||||    
T  6326328 ataattcagtgtaattacaagtgtcagcgtcggacac-cggaacacgcctaattcgagaagtgtccgtgcttcatagg 6326252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 24906332 - 24906252
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||| ||||||| |      ||||||||||||| ||||||||||| |||||||||||    
T  24906332 ataattcagtgtaattacaagtgtcggtatcggacatgacaataggacacgcctaattcgaggagtgtccgtgcttcatag 24906252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 10298597 - 10298670
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||| || ||||||||||||||||||||||| |      ||||||||||||||||||||||||| ||||||||||||    
T  10298597 ataatacaatgtaattacaagtgtcggtgtcgtatc----ggacacgcctaatccgaggagtgtccgtgcttcatagg 10298670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 21191087 - 21191051
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  21191087 ataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 38464351 - 38464311
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  38464351 cgggacacacctaatccgaggagtgtctgtgcttcataggt 38464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 14873603 - 14873642
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  14873603 cgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 17123128 - 17123166
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 35017124 - 35017162
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  35017124 cgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 39696005 - 39695950
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||||||||    
T  39696005 gtgtcggtgtccgacacg--ggacacgcctaatcctaggagtgtcggtgcttcatagg 39695950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 16203826 - 16203746
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg------cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||| |||||||||| | |||||||||||||||| |      ||| |||||| ||||||||||||||||||||||||||    
T  16203826 ataatttagtgtaattatatgtgtcggtgtcggacaagacacaccggtacacgcttaatccgaggagtgtctgtgcttcat 16203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 21576722 - 21576685
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21576722 gggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 21576776 - 21576739
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21576776 ataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 15086563 - 15086599
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15086563 acacgcctaatccgaggagtgtctttgcttcataggt 15086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 21191034 - 21190998
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21191034 cgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 33178053 - 33178089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||| ||||||||||||||||||||||||||||||    
T  33178053 ataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 43564962 - 43565002
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  43564962 cgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 2548464 - 2548499
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2548464 gacacacctaatccgaggagtgtctgtgcttcatag 2548499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 6035541 - 6035592
Alignment:
Q  229 gtgtcggtgtcggacacgc-gggacacgcctaatccgaggagtgtctgtgct 279  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||||||||||||    
T  6035541 gtgtcggtgacagacacgccgggacacgcctaatctgaggagtgtctgtgct 6035592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 14674333 - 14674368
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14674333 gacacacctaatccgaggagtgtctgtgcttcatag 14674368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 241
Target Start/End: Original strand, 15382504 - 15382539
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcgg 241  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15382504 catataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 21542058 - 21542089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  21542058 ataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 27932305 - 27932355
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||||||||||    
T  27932305 gtgtcggacac-caggacacgcctaattcgaggagtgtttgtgcttcatagg 27932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 36838615 - 36838650
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||| |||||||||||||||||||||    
T  36838615 gacacgcctaatccaaggagtgtctgtgcttcatag 36838650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 39698636 - 39698671
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||| |||||||||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 41995531 - 41995581
Alignment:
Q  232 tcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||| || ||||||||||||| ||||||||| |||||||||    
T  41995531 tcggtgtcggacacgagg-acacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 7677797 - 7677835
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  7677797 cgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 8420055 - 8420089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  8420055 ataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 11596434 - 11596396
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  11596434 ggacacgcctaatccgaggagtatttgtgcttcataggt 11596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 19820366 - 19820328
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  19820366 cgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 21351936 - 21351906
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtc 239  Q
    |||||||||||||||||||||||||||||||    
T  21351936 ataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 39268575 - 39268541
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  39268575 gggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 43001888 - 43001922
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  43001888 ggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 4105341 - 4105374
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttc 281  Q
    |||||||||||||||||||||||||| |||||||    
T  4105341 gggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 18421812 - 18421779
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||| |||||||||||||||||||||||||||    
T  18421812 gacacgtctaatccgaggagtgtctgtgcttcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 28588705 - 28588668
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  28588705 ataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 43564909 - 43564946
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  43564909 ataatttagtgtaattataagtgtcggtgtcggacacg 43564946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 2548415 - 2548451
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||| | |||||||||||||||||||    
T  2548415 ataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 3966596 - 3966632
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 6770621 - 6770657
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  6770621 acacgcctaatccgaagagtgtccgtgcttcataggt 6770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 9929684 - 9929720
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  9929684 ggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 19429491 - 19429546
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||| |||| |||| ||||||| || ||||||||||||||||||    
T  19429491 gtgtcggtgtctgacac-cgggtcacgtctaatccaagaagtgtctgtgcttcatag 19429546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 30502418 - 30502382
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30502418 taattcagtgtaattatatgtgtcggtgtcggacacg 30502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 30542761 - 30542725
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30542761 taattcagtgtaattatatgtgtcggtgtcggacacg 30542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 39342523 - 39342563
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  39342523 cgggacacgcctaatccaaggagtgtctctacttcataggt 39342563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 42893388 - 42893424
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  42893388 ataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 22881647 - 22881565
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||| |||||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||| |||||||||||||    
T  22881647 ataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 22881565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 35702619 - 35702542
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc-gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  35702619 ataattaagtgtaattacaagtgtcagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 24334736 - 24334662
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||| || |||||| |||||||||||||    
T  24334736 ataattcagtgtaattacaagtgtcggtgtcggacacgt----cacgcctaatccaagtagtgtccgtgcttcataggt 24334662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 13436486 - 13436563
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||| | |||| |||||||||||||  | ||||| |||||||||| |||||| ||||||||||||    
T  13436486 ataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgcttcatagg 13436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 35919307 - 35919226
Alignment:
Q  209 ataattcagtgtaattacaagtgtc-----ggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||| |||||||      |||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  35919307 ataattcagtgtaattataagtgtccgtgtcgtgtcggacacgcgggacacgcctaatcggaggactgtccgtgcttcatag 35919226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 46940824 - 46940747
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||| ||||||||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||||  ||||||||||||    
T  46940824 ataattaagtgtaattacaagtttcgcgtgtccgacac-cggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 19058887 - 19058850
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19058887 ataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 51410053 - 51410090
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51410053 ataattcagtgtaattacaagtgtcggtgtcggacacg 51410090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 1486682 - 1486646
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  1486682 cgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 18337357 - 18337393
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  18337357 ataattcagtgtaattacaagtgtcggtgtcggacac 18337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 46348417 - 46348377
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  46348417 catataatttagtgtaattacaagtgtcggtgtcggacacg 46348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 21366027 - 21365989
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggta 288  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgcttcataggta 21365989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 22947813 - 22947851
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcataggt 22947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 37598913 - 37598951
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  37598913 gggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 42325623 - 42325680
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||| ||||||||||  |||||||| |||||| |||||||||||||||||||||||||    
T  42325623 gtgtcagtgtcggacat-cgggacacacctaattcgaggagtgtctgtgcttcataggt 42325680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 47989589 - 47989627
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  47989589 cgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 1815285 - 1815322
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  1815285 ataattcagtgtaattacaagtgtcggtgtccgacacg 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 2218267 - 2218347
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg-----gacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||| |||||||||||||||||||||||||     |||||  || |||||||||||| |||||||||| |||||||||||    
T  2218267 ataatttagtgtaattacaagtgtcggtgtcgtgtccgacactagg-acacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 22515918 - 22515881
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22515918 ataatttagtgtaattacaagtgtcggtgtcggacacg 22515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 28273122 - 28273089
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28273122 catataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 31672925 - 31672888
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  31672925 taattcagtgtaattacaagtctcggtgtcggacacgc 31672888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 38078692 - 38078655
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||||||||||||||||||||||||||    
T  38078692 ataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 40258964 - 40258927
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  40258964 ataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 41877501 - 41877464
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41877501 ataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 42359478 - 42359445
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    ||||||||||||||||||||||||||||||||||    
T  42359478 aattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 9828136 - 9828176
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 40917841 - 40917881
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  40917841 cgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 42359427 - 42359391
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  42359427 cgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 52903274 - 52903314
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  52903274 catataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 2288198 - 2288123
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| ||||||||   |||||||||||||||||  | | ||||||||||||||||| |||| |||||||||||||    
T  2288198 ataattcaatgtaattat--gtgtcggtgtcggacacctgag-cacgcctaatccgaggaatgtcagtgcttcataggt 2288123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 6612202 - 6612171
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  6612202 ataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 287
Target Start/End: Original strand, 15765840 - 15765879
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  15765840 gggacacgcctaatccgaagagtgtccgtgcttcataggt 15765879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Complemental strand, 22515862 - 22515827
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||| |||||||||||    
T  22515862 gacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 24577217 - 24577186
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  24577217 ataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 25452179 - 25452108
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||   ||||||||||| ||||| ||| ||||||||||| |||| |||||| |||||||||    
T  25452179 ataattcagtgtaattat--gtgtcggtgtcagacac-cggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 34741927 - 34741966
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  34741927 cgggacacgcctaatccgaagagtgtccgtgcttcatagg 34741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 37598861 - 37598896
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacg 37598896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 47989525 - 47989556
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  47989525 ataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 16297257 - 16297223
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  16297257 ggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 16812637 - 16812675
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  16812637 cgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 27965978 - 27965940
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  27965978 cgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 28663636 - 28663715
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg----gacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||  |||||||||||||||||||||||    || |  | | ||||||||||| ||||||||||||||||||||||    
T  28663636 ataattctatgtaattacaagtgtcggtgtcgtatcgatatccagaacacgcctaattcgaggagtgtctgtgcttcata 28663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 5376500 - 5376448
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||   ||||  ||||||||||||||||||||||||||||    
T  5376500 gtgtcgatgtcggacacgc---acacatctaatccgaggagtgtctgtgcttcata 5376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 7918190 - 7918153
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  7918190 ggacacacctaatccgaggagtgtccgtgcttcatagg 7918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 9690251 - 9690210
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggta 288  Q
    ||||||||||||||||||  |||||| |||||||||||||||    
T  9690251 cgggacacgcctaatccggagagtgtttgtgcttcataggta 9690210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 18556422 - 18556385
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  18556422 gggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 21378606 - 21378635
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgt 238  Q
    ||||||||||||||||||||||||||||||    
T  21378606 ataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21620983 - 21621020
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  21620983 ataattcagtgtatttacaagcgtcggtgtcggacacg 21621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 30359446 - 30359487
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggta 288  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  30359446 cgggacacgccaaatctgaggagtgtccgtgcttcataggta 30359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 36878548 - 36878585
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  36878548 gggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 5898244 - 5898204
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||| ||||||||||||||||| |||||| ||||||    
T  5898244 cgggacacgtctaatccgaggagtgtccgtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 9630597 - 9630561
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||  |||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 16164280 - 16164236
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggtattgac 293  Q
    ||||||||||||||||| |||||| |||| ||||||||| |||||    
T  16164280 ggacacgcctaatccgaagagtgtatgtgtttcataggtgttgac 16164236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 17705617 - 17705545
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||| | |||||| |||||||| ||    |||||| ||||| |||||||||| ||||||||||||    
T  17705617 ataattcagtgtaattatatgtgtcg-tgtcggacgcg----acacgcttaatctgaggagtgtccgtgcttcatagg 17705545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 18190139 - 18190103
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||| |||| |||||    
T  18190139 ataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 29144354 - 29144318
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  29144354 acacgcctaatccgaagagtgtccgtgcttcataggt 29144318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 30749868 - 30749904
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  30749868 ataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 30771319 - 30771355
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  30771319 ataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 45534167 - 45534131
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  45534167 gggacacgccttatccgaggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 48450586 - 48450550
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  48450586 ggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 7938141 - 7938224
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggtatt 290  Q
    ||||||||| |||||||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||||||| ||||    
T  7938141 catataatttagtgtaattataagtgtcggtgtccgacac-cgagacacgcctgatccgaggagtgtccgtgcttcatagctatt 7938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 21924966 - 21924902
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtct 274  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21924966 ataattcagtgtaattatatgtgtcggtgtcggacac-cgggacacgcctaatccgaggagcgtct 21924902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 9911559 - 9911482
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg-gacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||||||| | ||  | ||||||||||||||||||||||||   ||||||||||    
T  9911559 ataattcagtgtaattacaagtgtcggtgtcgtgtcaaccaggacacgcctaatccgaggagtgttcatgcttcatag 9911482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 16388249 - 16388211
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16388249 tataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28152126 - 28152163
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28152126 ataattcagtgtaattacaagtgtcggtgtcggacacg 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28715323 - 28715360
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28715323 ataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 34595162 - 34595199
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34595162 ataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 4878025 - 4878065
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggtat 289  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgcttcataggtat 4878065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 7977861 - 7977825
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  7977861 ataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 8805574 - 8805523
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||| |||||| |||||| ||||||||||||||||||| ||||||||||||    
T  8805574 gtgtcagacacgtgggacatgcctaatccgaggagtgtccgtgcttcatagg 8805523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 17327627 - 17327588
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  17327627 gggacacgcctaatccgaggagtgtccgtgcttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 9025525 - 9025448
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg-----gacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    ||||||||||||||||| | ||||||||||||     ||||| |||||||||||||||||||| |||||| ||||||||    
T  9025525 ataattcagtgtaattatatgtgtcggtgtcgtgtccgacac-cgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 32839609 - 32839571
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32839609 cgggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 6898312 - 6898275
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  6898312 ataattaagtgtaattacaagtgtcggtgtcggacacg 6898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 26402711 - 26402674
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26402711 ataattcagtgtaatcacaagtgtcggtgtcggacacg 26402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 32978930 - 32978893
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32978930 ataattaagtgtaattacaagtgtcggtgtcggacacg 32978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 3209482 - 3209518
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3209482 ggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 26178656 - 26178620
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||| ||||||||||||||||||||    
T  26178656 cgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 31959187 - 31959268
Alignment:
Q  209 ataattcagtgtaattacaagtgtcgg-------tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||||||||||||||||||       |||| ||||| |||||||| |||||||||||||||||| ||||||||||    
T  31959187 ataatgcagtgtaattacaagtgtcggcgacatgtgtccgacac-cgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 1700384 - 1700454
Alignment:
Q  213 ttcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||| ||||||||||||||||||| | | | ||||||||| | ||||||||| ||| ||||||    
T  1700384 ttcagtgtaattataagtgtcggtgtcggacac-cagaatacgcctaattcaaggagtgtccgtgtttcata 1700454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 8365485 - 8365446
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  8365485 gggacacgcctaatccgaggagtctccgtgcttcataggt 8365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 8777002 - 8776967
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||||||||    
T  8777002 aattcagtgtaattacaagtgttggtgtcggacacg 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 10339091 - 10339052
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  10339091 gggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 10770705 - 10770674
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  10770705 ataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 16766725 - 16766756
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  16766725 ataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 17341657 - 17341622
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| |||||||||||    
T  17341657 ggacacgcctaatccgaggagtgtttgtgcttcata 17341622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 23771604 - 23771643
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  23771604 atatacttcagtgtaattacaaatgtcggtgtcggacacg 23771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 426545 - 426507
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  426545 ataattaaatgtaattacaagtgtcggtgtcggacacgc 426507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 7723233 - 7723199
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||| |||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 8714072 - 8714110
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  8714072 cgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 10649371 - 10649409
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcataggt 10649409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 17841564 - 17841530
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  17841564 gacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 34595215 - 34595253
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  34595215 cgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 403895 - 403858
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  403895 ataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 426514 - 426477
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatagg 426477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4877971 - 4878008
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  4877971 ataattaagtataattacaagtgtcggtgtcggacacg 4878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 8389459 - 8389411
Alignment:
Q  233 cggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    ||||||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  8389459 cggtgtccgacac-cgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 8776943 - 8776906
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  8776943 gacacacctaatccgaggagtgtccgtgcttcataggt 8776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 9107399 - 9107370
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  9107399 aattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 9522919 - 9522948
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgt 238  Q
    ||||||||||||||||||||||||||||||    
T  9522919 ataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 17841620 - 17841583
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  17841620 ataatttagtgtaattacaagtgacggtgtcggacacg 17841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 27904067 - 27904030
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  27904067 ataattcagtgtaattacaaatgtcggtgtcagacacg 27904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 31385011 - 31385048
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  31385011 cgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 34197137 - 34197170
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||| ||||||||||||||    
T  34197137 atataattcagtgtaattataagtgtcggtgtcg 34197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 4388163 - 4388199
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  4388163 ggacacgccttatccgagaagtgtctgtgcttcatag 4388199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 5732510 - 5732474
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||  ||||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 7265624 - 7265588
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  7265624 ataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 7801187 - 7801155
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcgg 241  Q
    ||||||||| |||||||||||||||||||||||    
T  7801187 ataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 20576606 - 20576566
Alignment:
Q  252 cacgcctaatccgaggagtgtctgtgcttcataggtattga 292  Q
    |||| |||||||||| |||||||||||||||||||| ||||    
T  20576606 cacgtctaatccgagaagtgtctgtgcttcataggtcttga 20576566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 27903999 - 27903963
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  27903999 gggacacacctaatccgaggagtgtctgtgattcata 27903963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 30094066 - 30094133
Alignment:
Q  218 tgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  30094066 tgtaattacaagtgtcggtgtcggacac-cgggacacgcctaatccgaagagtgtccgtgctacatagg 30094133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 30298975 - 30299049
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||||||||||  |   ||||||||| ||||||||||||||||| ||||||||||||    
T  30298975 ataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgcttcatagg 30299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 30327843 - 30327917
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||||||||||  |   ||||||||| ||||||||||||||||| ||||||||||||    
T  30327843 ataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgcttcatagg 30327917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 6879496 - 6879435
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagt 270  Q
    |||||| ||||||||||||||||||||||||||||||||   |||||||||||| |||||||    
T  6879496 ataattaagtgtaattacaagtgtcggtgtcggacacgcataacacgcctaatctgaggagt 6879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 42640557 - 42640643
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----------cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||||||||||||||          | |||||||||||||||||||||| || |||||||||||    
T  42640557 ataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 12797369 - 12797332
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12797369 ataattcagtgtaattacaagtgtcggtgtcggacacg 12797332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 16073422 - 16073459
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16073422 ataattcagtgtaattacaagtgtcggtgtcggacacg 16073459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 16184913 - 16184954
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggtat 289  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  16184913 gggacacgcctaatccgaggagtgtttgtgcttcataggtat 16184954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 17425420 - 17425348
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||   ||||| ||||| |||||  || ||||||||||||||||||||||||||||||||||    
T  17425420 ataattcagtgtaattat--gtgtctgtgtcagacacaagg-acacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 5775342 - 5775303
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5775342 cgggacacgcctaatccgaggagtgtccgtgcttcatagg 5775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 21945531 - 21945566
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  21945531 ataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 23292964 - 23292926
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  23292964 cgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 715582 - 715545
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| |||||||||||    
T  715582 gggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 752908 - 752871
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| |||||||||||    
T  752908 gggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 3064903 - 3064866
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgcttcataggt 3064866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 23293017 - 23292980
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23293017 ataattcagtataattacaagtgtcggtgtcggacacg 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 28000776 - 28000743
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28000776 catataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 28964279 - 28964242
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  28964279 ataattcagtgtaattacaagtgtctgtgtcggacacg 28964242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 29205472 - 29205509
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29205472 ataattcagtgtaattacaagtgtcggtgttggacacg 29205509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 49431054 - 49431091
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  49431054 ataattcagtgtaattaaaagtgtcggtgtcggacacg 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 54580054 - 54580017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  54580054 ataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 11596335 - 11596295
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  11596335 cgggacacgcctaatctgaggagtgtccgtgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 20633510 - 20633593
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-----gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggta 288  Q
    |||||||| |||||||||||||||||     ||||||||||| |  |||||||||||||| ||||||||  ||||||||||||||    
T  20633510 ataattcaatgtaattacaagtgtcgtgtcggtgtcggacac-caagacacgcctaatccaaggagtgttcgtgcttcataggta 20633593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 53381568 - 53381528
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  53381568 cgggacacacctaatccgaggagtgtccgtgcttcataggt 53381528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 4383449 - 4383484
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 40784034 - 40784073
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgcttcatagg 40784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 12895252 - 12895214
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  12895252 cgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 17876249 - 17876287
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  17876249 ggacacacctaatccaaggagtgtctgtgcttcataggt 17876287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 18513211 - 18513173
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  18513211 ggacacgcctaatctgaggagtgtccgtgcttcataggt 18513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 22440631 - 22440559
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||| | ||| | ||||| |||||   ||||||||||||||||||||||||| |||||||||    
T  22440631 ataattcagtgtaattatatgtgac-gtgtccgacac-taggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 28084606 - 28084640
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  28084606 gggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 28470446 - 28470484
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  28470446 cgggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 34306828 - 34306798
Alignment:
Q  216 agtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacg 34306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 36635411 - 36635449
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  36635411 cgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 482269 - 482232
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| || |||||||||||||||||    
T  482269 ataattcagtgtaattataactgtcggtgtcggacacg 482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 2362006 - 2361969
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  2362006 ataatttagtgtaattaaaagtgtcggtgtcggacacg 2361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4157177 - 4157214
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4157177 ataatttagtgcaattacaagtgtcggtgtcggacacg 4157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4157464 - 4157501
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4157464 ataatttagtgcaattacaagtgtcggtgtcggacacg 4157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 8423749 - 8423712
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| || |||||||||||||||||    
T  8423749 ataattcagtgtaattataaatgtcggtgtcggacacg 8423712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 10499301 - 10499227
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||| |||||||||| | ||||| ||||||||| ||    |||||||||||||||||| |||| |||||||||||    
T  10499301 ataatttagtgtaattatatgtgtcagtgtcggacccgac--acacgcctaatccgaggattgtccgtgcttcatag 10499227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 16073478 - 16073515
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  16073478 gacacgcctaatccgaggagtgtccatgcttcataggt 16073515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 16303299 - 16303266
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||| |||||||||||||||||||||||||    
T  16303299 atataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 28964225 - 28964188
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  28964225 gggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 29205550 - 29205587
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||  |||||||||||    
T  29205550 gggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 5922568 - 5922532
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  5922568 gggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 18844459 - 18844423
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||| |||||| |||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 38847046 - 38847010
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcgga 242  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  38847046 catattattcagtgtaattacaagtgtcagtgtcgga 38847010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 47264080 - 47264116
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  47264080 ggacacgcctaatccgaagagcgtctgtgcttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 25566869 - 25566949
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||||||||     |    |||||||||||||||||||||||||||||||||||||||    
T  25566869 ataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 4948680 - 4948754
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||  | ||||||  |||||||||||    
T  4948680 ataattcagtgtaattacaagtgtcggtgtcggaca--cgagacacgcctaatcgaatgagtgtacgtgcttcatag 4948754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 31514901 - 31514973
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||| |||| ||||||||| ||||| |||||||    ||||||||||||||||||||||| |||||||||||    
T  31514901 ataattcagcgtaactacaagtgttggtgttggacacg----acacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 8343000 - 8343087
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----------cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||| ||||||||||||||||||||||||| ||| |          ||||||||||||||||||| ||||||||||||||||||||    
T  8343000 ataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 13436964 - 13436910
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  13436964 gtgtcggtgtcg-acac-cgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 24669461 - 24669536
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||||||| |||  | ||||| ||||||||||| ||| |||  ||||||||||    
T  24669461 ataattcagtgtaattacaagtgtcggtgtcgaaca-tcaggacatgcctaatccgatgagcgtccatgcttcatag 24669536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 36450730 - 36450694
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||||||||||||    
T  36450730 ggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 8343408 - 8343447
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8343408 cgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 24613548 - 24613587
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcg 248  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  24613548 ataattaagtgtaattacaagtgtcggtgtcggacacgcg 24613587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 11833935 - 11833969
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 16641947 - 16641909
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  16641947 cgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 20873097 - 20873134
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  20873097 ataatttagtgtaattacaagtgtcggtgtcggacacg 20873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 30271286 - 30271249
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  30271286 ataatgcagtgtaattacaagtgtcggtgtcggacacg 30271249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 40332219 - 40332256
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40332219 ataattcagtgtaattacaagtgtcggtgtgggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 4673388 - 4673352
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4673388 acacgcctaatccaaggagtgtctgtgcttcataggt 4673352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 27213595 - 27213646
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||    
T  27213595 gtgtcggacac-cgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 29510271 - 29510231
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  29510271 cgggacacacctaatccgaggagtgtccgtgcttcataggt 29510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 17468503 - 17468457
Alignment:
Q  229 gtgtcggtgtcggacacgcggg--acacgcctaatccgaggagtgtc 273  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  17468503 gtgtcggtgtcggacacgagggggacacgcctaatccgaggagtgtc 17468457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 18964274 - 18964309
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18964274 gacacgccttatccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 22204667 - 22204706
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  22204667 atataattcagtgtaattacaagtgtcagtgtcagacacg 22204706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 36450783 - 36450748
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||||||||    
T  36450783 aattcagtgtaattacaagtgtaggtgtcggacacg 36450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 15023289 - 15023255
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcgga 242  Q
    ||||||||||||||||||||||||||| |||||||    
T  15023289 tataattcagtgtaattacaagtgtcgatgtcgga 15023255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 15816096 - 15816058
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  15816096 cgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 17751737 - 17751775
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  17751737 cgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 17760724 - 17760762
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  17760724 cgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 22596022 - 22596056
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||||||||||||||||||| ||||||||||    
T  22596022 ataattcagtgtaattacaagtgttggtgtcggac 22596056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 22652068 - 22652106
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  22652068 cgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 24858097 - 24858135
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  24858097 cgggacacgcctaatcagaggagtgtttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 30077418 - 30077380
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  30077418 ataattcagtgtaattacaagtgtccgtgtcggatacgc 30077380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 39820509 - 39820547
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  39820509 cgggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 18407747 - 18407784
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18407747 ataattcagtgtaattacaagtgtcgctgccggacacg 18407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 31557024 - 31557061
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  31557024 ataattcagtgtaattacaagtttcggtgtcagacacg 31557061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 38487193 - 38487156
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||| | |||||||||||||||||||||||||||||    
T  38487193 ggacacacataatccgaggagtgtctgtgcttcatagg 38487156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 9383029 - 9383085
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||  |||| | ||||||||||||||| || |||||| |||||||||||    
T  9383029 gtgtcggtgtcaaacacacaggacacgcctaatccaagcagtgtccgtgcttcatag 9383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 16987994 - 16988030
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||| |||||||||||||||||| |||||||||    
T  16987994 cgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 31109495 - 31109463
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgctt 280  Q
    |||||||||||||||||||||||||| ||||||    
T  31109495 gggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 20539708 - 20539630
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||| |||||||||||||||||||||||||     ||| ||||||||| |||||||||||||| |||||||||||||    
T  20539708 catataatttagtgtaattacaagtgtcggtgtcg---tggcgagacacgcctgatccgaggagtgtccgtgcttcataggt 20539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 19536428 - 19536390
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19536428 ataattcagtgtaattacaagtgtcggtgtcggacacgc 19536390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 42832303 - 42832234
Alignment:
Q  213 ttcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||| ||||||||||||| ||| | ||||||||||||||||| |||||||||  ||||||||    
T  42832303 ttcagtgtaattataagtgtcggtgtccgactc-cgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 2438750 - 2438713
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2438750 ataattcagtgtaattacaagtgtcggtgtcggacacg 2438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 20473347 - 20473427
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg--cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||| |||| | ||| | || ||||||| ||||||||||    
T  20473347 catataattcagtgtaattacaagtgtcgatgtcggacacggccggaacacacttaacctgaagagtgtccgtgcttcata 20473427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21624295 - 21624332
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21624295 ataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 37419835 - 37419875
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37419835 cgggacacgcctaatccgaggagtgtccgtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 15972903 - 15972938
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacg 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 22084794 - 22084756
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  22084794 cgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 5040762 - 5040799
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||||||||||||||||||||||||||    
T  5040762 ataattcaatgtaattacaagtgtcggtgtcggacacg 5040799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 26769604 - 26769641
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| |||||||||||    
T  26769604 gggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 27460064 - 27460101
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27460064 tataattcagtgtaattacaagggtcggtgtcggacac 27460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 30404881 - 30404844
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30404881 ataattcagtgtaattacaagtgtcggcgtcggacacg 30404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 34691839 - 34691798
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  34691839 catataattcagtgtaattatatgtgtcggtgtcggacacgc 34691798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 34714251 - 34714210
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  34714251 catataattcagtgtaattatatgtgtcggtgtcggacacgc 34714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 44635527 - 44635612
Alignment:
Q  210 taattcagtgtaattacaa------gtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||      ||||||||||||||||||    || ||||||||||||| |||||||||| |||||||||||    
T  44635527 taattcagtgtaattacaagtgtcggtgtcggtgtcggacacgacaccgagacacgcctaatctgaggagtgtccgtgcttcatag 44635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 2438697 - 2438661
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2438697 cgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 18421991 - 18422027
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18421991 ataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Complemental strand, 18420398 - 18420363
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||| ||||||||||||||||||    
T  18420398 gacacgcctaatccgagaagtgtctgtgcttcatag 18420363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 34221502 - 34221463
Alignment:
Q  246 gcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  34221502 gcgggacacgcctaatccgaggagtttccgtgcttcatag 34221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 5473376 - 5473433
Alignment:
Q  229 gtgtcggtgtcggacacg--cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||||||  ||||||||    
T  5473376 gtgtcggtgtcggacacgagcgggacacctctaatccgaggagtgtcttagcttcata 5473433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 11223831 - 11223793
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 11223894 - 11223864
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtc 239  Q
    |||||||||||||||||||||||||||||||    
T  11223894 ataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 12748737 - 12748786
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||||||||||    
T  12748737 gtgtcggacac-cgggacatgcctaatttgaggagtgtctgtgcttcatag 12748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 18840991 - 18840953
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  18840991 cgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 37559005 - 37559039
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  37559005 ataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 38117137 - 38117099
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  38117137 cgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 41843516 - 41843565
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||| |||||| ||||||||| | ||||||||||||||||||||||||||    
T  41843516 gtgtccgacacg-gggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 4882729 - 4882696
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| |||||    
T  4882729 atataattcagtgtaattacaagtgtcgatgtcg 4882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 5367220 - 5367257
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  5367220 ataattcagtgtaattatatgtgtcggtgtcggacacg 5367257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 12224251 - 12224288
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| || |||||||||||||||||||||||||||||    
T  12224251 ataatccaatgtaattacaagtgtcggtgtcggacacg 12224288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 14996257 - 14996224
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||| ||||||||||||||||||||||||    
T  14996257 catataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 18841044 - 18841007
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  18841044 ataattaagtgtaattacaagtgtcggtgtcagacacg 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 20242703 - 20242666
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  20242703 ggacacgccttatccgaagagtgtctgtgcttcatagg 20242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 23354619 - 23354582
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  23354619 cgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28596497 - 28596534
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  28596497 ataagtcagtgtaattataagtgtcggtgtcggacacg 28596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 33884082 - 33884115
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||||||||||||| ||||    
T  33884082 attcagtgtaattacaagtgtcggtgtcgaacac 33884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 34784948 - 34784911
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| || |||||||||||||||||||||||    
T  34784948 gggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 42511359 - 42511322
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  42511359 gggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 43586036 - 43585999
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  43586036 ataattcaatgtaatcacaagtgtcggtgtcggacacg 43585999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 974778 - 974806
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||||    
T  974778 attcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 3444863 - 3444827
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  3444863 gggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 10535721 - 10535685
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||  |||||||||||    
T  10535721 ggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 19942346 - 19942382
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||  ||||||||    
T  19942346 cgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 20242758 - 20242722
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  20242758 ataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 23354962 - 23354926
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||  ||||||||    
T  23354962 cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 36756307 - 36756275
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||| |||||||||||||||||||    
T  36756307 acacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 123656 - 123731
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||||  |    | |||||||||||||||||||||| ||| |||||||||    
T  123656 ataattcagtgtaattacaagtgtcggtgtcttaacatcaggacacgcctaatccgaggagtatctatgcttcata 123731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 92893 - 92945
Alignment:
Q  236 tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggtat 289  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||| ||||    
T  92893 tgtcggacac-ctggacacgcctaatccgaggagtgtccgtgcttcatatgtat 92945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 45561 - 45524
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacacg 45524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25775537 - 25775574
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25775537 ataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8383282 - 8383322
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8383282 catataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 13414497 - 13414572
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||| |||||||| | |||||||||||||||||  ||||||||||| ||||||| ||||||| | ||||||||    
T  13414497 ataattcaatgtaattatatgtgtcggtgtcggacac-agggacacgccttatccgagaagtgtctatacttcatag 13414572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 11252061 - 11252095
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||||||||||||    
T  11252061 acacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 20503546 - 20503584
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  20503546 cgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 28812609 - 28812647
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  28812609 ggacacgcctaatccgaggagtgtctgtgcctcataggt 28812647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 34185090 - 34185052
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34185090 cgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 10954980 - 10955017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10954980 ataattcagtgtaatcacaagtgtcggtgtcggacacg 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 16000047 - 16000010
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||| |||||||||||||||||||||||    
T  16000047 ataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 20503493 - 20503530
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  20503493 ataattcagtgtaattacaagtgtcggtgttggacacg 20503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 40052370 - 40052433
Alignment:
Q  225 acaagtgtcg--gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||  ||||| ||||| ||||||||||||||||||||||||||  |||||||||||||    
T  40052370 acaagtgtcgacgtgtccgacac-cgggacacgcctaatccgaggagtgttcgtgcttcataggt 40052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 40150604 - 40150527
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacgcgg-gacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||| |||||| | | ||||||||||| |||| |||  ||||| |||||||||||||||||| |||||||||    
T  40150604 atataattcaatgtaatcatatgtgtcggtgtctgacatgcgtcgacacacctaatccgaggagtgtccgtgcttcat 40150527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 40993313 - 40993272
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggta 288  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  40993313 cgggacacgcctaatccgaggagtgtccatgcttcataggta 40993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 41961616 - 41961575
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataggtat 289  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  41961616 gggacacgcctaatccgagaagtgtccgtgcttcataggtat 41961575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 55401103 - 55401140
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  55401103 ataatttagtgtaattacaagtgtcggtgtcggacacg 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 7171526 - 7171566
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  7171526 catataattcggtgtaattacaagtgttggtgtcggacacg 7171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 8789536 - 8789489
Alignment:
Q  236 tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||||    
T  8789536 tgtcggacac-cgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 14979230 - 14979270
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  14979230 cgggacacgcctaacccgaggagtgtccgtgcttcataggt 14979270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 26492239 - 26492199
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  26492239 catacaattcagtgtaattacaagtatcggtgtcggacacg 26492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 51206384 - 51206348
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||| ||||||||||||||||||||||    
T  51206384 ataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 8587052 - 8587017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    |||||| |||||||||||||||||||||||||||||    
T  8587052 ataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 8593165 - 8593200
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    |||||||||| |||||||||||||||||||||||||    
T  8593165 ataattcagtataattacaagtgtcggtgtcggaca 8593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 8842413 - 8842448
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||| |||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 11610549 - 11610628
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg----gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||||| |||||||||||     ||||| ||||  |||||||||||||||| |||||||||| |||||||||||    
T  11610549 ataattcagtgtagttacaagtgtcaagtcgtgtccgacat-cgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 28918029 - 28918060
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  28918029 ataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 55401159 - 55401194
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||| |||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 7928478 - 7928516
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  7928478 ataattcagtgtaattatatgtgtcggtgtcggacacgc 7928516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 14216917 - 14216951
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| ||||||    
T  14216917 catataattcagtgtaattacaagtgtccgtgtcg 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 14223046 - 14223080
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| ||||||    
T  14223046 catataattcagtgtaattacaagtgtccgtgtcg 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 15505823 - 15505785
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  15505823 atataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 15796328 - 15796294
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||| |||||||||||    
T  15796328 catataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 27505332 - 27505370
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  27505332 cgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 3865702 - 3865739
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  3865702 ataattcagtataattacaagtgtcggtgtctgacacg 3865739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 10268517 - 10268457
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagt 270  Q
    |||||| |||||||||||||||||| ||||| ||||| ||| ||||||||| ||| ||||||    
T  10268517 ataatttagtgtaattacaagtgtcagtgtcagacac-cggaacacgcctagtcctaggagt 10268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 21211376 - 21211413
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  21211376 gggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 21367330 - 21367382
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||  || |||| ||||||||||| |||||||||||||||    
T  21367330 gtgtcggtgtcggacacttgg-acacacctaatccgagaagtgtctgtgcttca 21367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 34185152 - 34185123
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  34185152 aattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 34910398 - 34910435
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  34910398 cgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 35994769 - 35994733
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  35994769 ataattcagtgtaattacaagtgtc-gtgtcggacacg 35994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 40993366 - 40993329
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  40993366 ataattcagtgtaattatatgtgtcggtgtcggacacg 40993329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 4987258 - 4987222
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| || ||||||    
T  4987258 cgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 5339197 - 5339225
Alignment:
Q  256 cctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||    
T  5339197 cctaatccgaggagtgtctgtgcttcata 5339225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 17005653 - 17005621
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgt 238  Q
    |||||||||||||||||||| ||||||||||||    
T  17005653 catataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 21861658 - 21861694
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcatag 21861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 26508138 - 26508166
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtg 237  Q
    |||||||||||||||||||||||||||||    
T  26508138 ataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 49651754 - 49651714
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| ||||||||||| |||||| |||||||||||||    
T  49651754 cgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 52369868 - 52369908
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| |||| ||||||||||||| |||||||||||||    
T  52369868 cgggacacacctattccgaggagtgtccgtgcttcataggt 52369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 491 - 456
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  491 aattcagtgtaattacaagtgtcggtgtcggacacg 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 440 - 403
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  440 cgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 3390 - 3428
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3390 gggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 4858 - 4821
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4858 gggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 21372 - 21409
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21372 gacacgcctaatccgagaagtgtctgtgcttcataggt 21409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 21243 - 21280
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||||||| || |||||||||||||    
T  21243 gacacgcctaatccgaggagtatccgtgcttcataggt 21280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 70306 - 70343
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  70306 ataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 46710 - 46776
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||    
T  46710 ataattcagtgtaattacaaatgtcggtgtcg----------acacgcctaatccgaggagtgtccgtgcttcatag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8823 - 8863
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  8823 catattatttagtgtaattacaagtgtcggtgtcggacacg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 71817 - 71857
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  71817 cgggacacgactaatccgaggagtgtcggtgcttcataggt 71857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 236952 - 236912
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  236952 cgggacacacctaatctgaggagtgtctgtgcttcataggt 236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 241686 - 241724
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  241686 cgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Complemental strand, 5011 - 4976
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    |||| |||||||||||||||||||||||||||||||    
T  5011 gacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 5058 - 5030
Alignment:
Q  218 tgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacg 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 23798 - 23829
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  23798 ataattcagtgtaattacaagtgtcggtgtcg 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 24119 - 24157
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataggt 287  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  24119 ggacacgcctaatccgatgagtgtccgtgcttcataggt 24157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 15053 - 15090
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcatag 285  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  15053 gggacacgccttatccgaggagtgtttgtgcttcatag 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 63801 - 63853
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatc 262  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| |||| |||||||    
T  63801 ataattcagtgcaattacaagtgtcggtgtcagacac-cggaacacacctaatc 63853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 3813 - 3777
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcatagg 286  Q
    ||||||||||||||||||||||||  |||||||||||    
T  3813 gacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8035 - 8074
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  8035 catataatacagtgtaatta-aagtgtcggtgtcggacacg 8074  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 130510 - 130538
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtg 237  Q
    |||||||||||||||||||||||||||||    
T  130510 ataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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