View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0693_low_10 (Length: 388)

Name: NF0693_low_10
Description: NF0693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0693_low_10
NF0693_low_10
[»] chr1 (28 HSPs)
chr1 (1-188)||(23664087-23664274)
chr1 (16-188)||(25095118-25095290)
chr1 (38-188)||(17967303-17967453)
chr1 (16-188)||(21906332-21906504)
chr1 (16-188)||(5049408-5049580)
chr1 (16-188)||(22070456-22070628)
chr1 (38-188)||(48596331-48596481)
chr1 (41-188)||(27430769-27430916)
chr1 (16-188)||(34307425-34307597)
chr1 (16-188)||(48999356-48999526)
chr1 (44-153)||(49229351-49229460)
chr1 (41-153)||(5509869-5509980)
chr1 (39-154)||(12027763-12027878)
chr1 (38-152)||(5209695-5209809)
chr1 (43-153)||(9023193-9023303)
chr1 (38-155)||(36296668-36296785)
chr1 (49-155)||(24185677-24185782)
chr1 (38-155)||(42722203-42722320)
chr1 (38-154)||(28945832-28945948)
chr1 (44-124)||(47397570-47397650)
chr1 (104-188)||(26465116-26465202)
chr1 (38-141)||(48646129-48646232)
chr1 (38-154)||(26221650-26221766)
chr1 (38-126)||(44310430-44310518)
chr1 (52-153)||(41665592-41665692)
chr1 (38-150)||(12783987-12784098)
chr1 (88-153)||(47559565-47559629)
chr1 (88-152)||(17385407-17385470)
[»] chr5 (25 HSPs)
chr5 (16-188)||(5578587-5578759)
chr5 (41-188)||(13490368-13490515)
chr5 (15-188)||(13382579-13382752)
chr5 (16-188)||(23962803-23962975)
chr5 (16-188)||(2676918-2677089)
chr5 (42-188)||(9409531-9409677)
chr5 (42-188)||(42879574-42879720)
chr5 (38-183)||(18889043-18889188)
chr5 (40-152)||(13826235-13826347)
chr5 (16-188)||(39537378-39537540)
chr5 (40-155)||(29789522-29789637)
chr5 (47-155)||(13820881-13820989)
chr5 (55-153)||(8806333-8806430)
chr5 (46-140)||(20892294-20892388)
chr5 (38-152)||(38915730-38915843)
chr5 (44-152)||(29149634-29149741)
chr5 (38-155)||(16040198-16040315)
chr5 (38-155)||(38491012-38491129)
chr5 (38-154)||(7850280-7850396)
chr5 (41-152)||(5121205-5121316)
chr5 (38-152)||(6769378-6769489)
chr5 (43-128)||(43171438-43171523)
chr5 (88-152)||(37134753-37134817)
chr5 (68-154)||(3654677-3654762)
chr5 (39-155)||(32698734-32698849)
[»] chr2 (36 HSPs)
chr2 (38-188)||(27861800-27861950)
chr2 (38-188)||(2554031-2554181)
chr2 (38-188)||(44314022-44314172)
chr2 (38-188)||(44322201-44322351)
chr2 (16-188)||(33015172-33015344)
chr2 (38-188)||(22575963-22576113)
chr2 (38-188)||(41825943-41826093)
chr2 (16-188)||(19685746-19685916)
chr2 (39-188)||(6221362-6221511)
chr2 (38-150)||(38566216-38566328)
chr2 (38-152)||(33054748-33054862)
chr2 (38-155)||(19091195-19091312)
chr2 (38-151)||(41302463-41302576)
chr2 (16-153)||(38422950-38423087)
chr2 (45-150)||(10022892-10022997)
chr2 (38-155)||(11199297-11199414)
chr2 (38-153)||(24484451-24484566)
chr2 (38-152)||(14903999-14904113)
chr2 (38-120)||(41422922-41423004)
chr2 (38-155)||(7880371-7880488)
chr2 (52-153)||(13597889-13597989)
chr2 (44-155)||(30386835-30386945)
chr2 (38-152)||(45277506-45277620)
chr2 (38-155)||(19677994-19678111)
chr2 (38-151)||(6882973-6883088)
chr2 (43-149)||(9057380-9057484)
chr2 (38-155)||(2565587-2565704)
chr2 (40-155)||(29303144-29303259)
chr2 (95-153)||(41422863-41422921)
chr2 (45-154)||(25621421-25621529)
chr2 (41-155)||(18781194-18781308)
chr2 (90-151)||(9425217-9425278)
chr2 (111-154)||(25416074-25416117)
chr2 (16-80)||(31549172-31549236)
chr2 (44-151)||(43673290-43673397)
chr2 (41-80)||(25416124-25416163)
[»] chr8 (23 HSPs)
chr8 (16-188)||(1981549-1981721)
chr8 (16-188)||(3762650-3762822)
chr8 (16-188)||(45117419-45117591)
chr8 (16-188)||(16729683-16729855)
chr8 (16-188)||(31597475-31597647)
chr8 (38-188)||(4432051-4432201)
chr8 (41-188)||(40971420-40971567)
chr8 (42-188)||(7972960-7973106)
chr8 (42-175)||(39906226-39906359)
chr8 (38-188)||(7263611-7263761)
chr8 (38-153)||(9137509-9137625)
chr8 (41-154)||(9382238-9382351)
chr8 (38-153)||(24190359-24190474)
chr8 (44-154)||(11648767-11648876)
chr8 (38-152)||(6927561-6927675)
chr8 (38-155)||(28509226-28509343)
chr8 (51-154)||(32073246-32073349)
chr8 (38-155)||(2879229-2879346)
chr8 (39-154)||(2807702-2807817)
chr8 (42-152)||(24682594-24682704)
chr8 (42-153)||(28374579-28374688)
chr8 (38-79)||(602275-602316)
chr8 (40-153)||(23232238-23232351)
[»] chr4 (30 HSPs)
chr4 (16-188)||(10095001-10095173)
chr4 (38-188)||(7413723-7413872)
chr4 (38-188)||(7459804-7459953)
chr4 (42-188)||(39480230-39480376)
chr4 (42-156)||(6261592-6261706)
chr4 (38-155)||(52458991-52459108)
chr4 (38-155)||(52460248-52460365)
chr4 (41-155)||(10142121-10142235)
chr4 (38-153)||(1843172-1843287)
chr4 (38-152)||(13957225-13957339)
chr4 (41-153)||(9921865-9921977)
chr4 (42-188)||(36213712-36213857)
chr4 (54-153)||(42512245-42512344)
chr4 (40-153)||(3665477-3665589)
chr4 (38-155)||(51337617-51337734)
chr4 (88-152)||(24611366-24611430)
chr4 (38-154)||(28143468-28143584)
chr4 (38-149)||(29283029-29283139)
chr4 (43-154)||(10373385-10373495)
chr4 (50-152)||(41509209-41509310)
chr4 (38-155)||(14192335-14192452)
chr4 (41-116)||(23935828-23935903)
chr4 (42-155)||(21319991-21320104)
chr4 (92-152)||(25201039-25201099)
chr4 (42-153)||(9900076-9900187)
chr4 (91-152)||(51890447-51890508)
chr4 (91-152)||(51890721-51890782)
chr4 (42-153)||(56366889-56366999)
chr4 (38-100)||(24612043-24612105)
chr4 (41-74)||(51890934-51890967)
[»] chr3 (28 HSPs)
chr3 (16-188)||(10994128-10994300)
chr3 (38-188)||(27941495-27941645)
chr3 (38-188)||(53076947-53077097)
chr3 (16-188)||(25071596-25071768)
chr3 (38-188)||(19157068-19157218)
chr3 (38-188)||(52448118-52448268)
chr3 (42-185)||(15760838-15760981)
chr3 (38-153)||(29713781-29713896)
chr3 (16-154)||(47184918-47185056)
chr3 (42-152)||(1698398-1698508)
chr3 (39-153)||(10993086-10993200)
chr3 (45-153)||(44663338-44663446)
chr3 (42-154)||(11640005-11640117)
chr3 (38-152)||(30191185-30191298)
chr3 (64-152)||(3918145-3918234)
chr3 (38-155)||(23044908-23045025)
chr3 (38-155)||(31884968-31885085)
chr3 (48-154)||(12893035-12893141)
chr3 (38-104)||(24927913-24927979)
chr3 (90-153)||(53472148-53472211)
chr3 (41-152)||(1424675-1424782)
chr3 (38-152)||(40145441-40145552)
chr3 (38-155)||(6024777-6024894)
chr3 (53-142)||(17147208-17147296)
chr3 (41-152)||(16876891-16876999)
chr3 (88-152)||(4127549-4127612)
chr3 (42-153)||(6583948-6584059)
chr3 (44-78)||(4127314-4127348)
[»] scaffold0016 (4 HSPs)
scaffold0016 (38-182)||(87618-87762)
scaffold0016 (38-182)||(89044-89188)
scaffold0016 (38-178)||(88096-88236)
scaffold0016 (38-178)||(88572-88712)
[»] chr6 (22 HSPs)
chr6 (16-185)||(18675306-18675475)
chr6 (16-188)||(34043497-34043669)
chr6 (38-188)||(22012095-22012245)
chr6 (16-185)||(1422908-1423077)
chr6 (16-188)||(1603323-1603494)
chr6 (38-184)||(1131749-1131895)
chr6 (38-188)||(20990412-20990564)
chr6 (38-153)||(11680871-11680986)
chr6 (88-188)||(21442662-21442762)
chr6 (38-153)||(31129720-31129834)
chr6 (38-152)||(15060141-15060255)
chr6 (41-152)||(26817336-26817445)
chr6 (38-153)||(19107911-19108026)
chr6 (38-155)||(33516638-33516755)
chr6 (45-153)||(4065601-4065709)
chr6 (48-152)||(3229212-3229315)
chr6 (38-152)||(12269374-12269487)
chr6 (52-124)||(26212906-26212978)
chr6 (52-151)||(4090808-4090907)
chr6 (88-128)||(22524751-22524791)
chr6 (16-118)||(13758826-13758928)
chr6 (95-155)||(14677761-14677821)
[»] chr7 (33 HSPs)
chr7 (16-185)||(8389281-8389450)
chr7 (16-188)||(20394764-20394936)
chr7 (38-188)||(13754090-13754240)
chr7 (38-188)||(31072503-31072653)
chr7 (38-188)||(35477956-35478106)
chr7 (38-188)||(18667343-18667493)
chr7 (16-188)||(4539819-4539986)
chr7 (45-154)||(21863581-21863690)
chr7 (70-188)||(1623572-1623689)
chr7 (38-155)||(39038903-39039020)
chr7 (42-153)||(24441941-24442052)
chr7 (43-154)||(41822148-41822259)
chr7 (41-154)||(29636904-29637017)
chr7 (39-155)||(40934025-40934140)
chr7 (43-153)||(43179439-43179548)
chr7 (38-155)||(48636668-48636785)
chr7 (38-155)||(6189415-6189532)
chr7 (38-114)||(5770852-5770928)
chr7 (46-153)||(44733619-44733725)
chr7 (38-155)||(48238426-48238542)
chr7 (46-152)||(8604612-8604718)
chr7 (38-155)||(8069546-8069663)
chr7 (56-152)||(8113930-8114024)
chr7 (90-153)||(9420482-9420545)
chr7 (38-108)||(47522415-47522485)
chr7 (64-155)||(28460255-28460345)
chr7 (41-155)||(135632-135746)
chr7 (70-143)||(3124281-3124354)
chr7 (64-152)||(35118263-35118348)
chr7 (38-151)||(36628434-36628547)
chr7 (68-152)||(45446083-45446166)
chr7 (42-153)||(10015747-10015857)
chr7 (51-120)||(23381092-23381161)
[»] scaffold1266 (1 HSPs)
scaffold1266 (39-153)||(1289-1403)
[»] scaffold0093 (1 HSPs)
scaffold0093 (16-143)||(50881-51008)
[»] scaffold0263 (1 HSPs)
scaffold0263 (42-153)||(18613-18724)
[»] scaffold0178 (1 HSPs)
scaffold0178 (41-153)||(2443-2555)
[»] scaffold0160 (1 HSPs)
scaffold0160 (42-152)||(25097-25207)
[»] scaffold0116 (1 HSPs)
scaffold0116 (44-153)||(40797-40906)
[»] scaffold0743 (1 HSPs)
scaffold0743 (38-152)||(3318-3432)
[»] scaffold1364 (1 HSPs)
scaffold1364 (92-153)||(873-934)
[»] scaffold0137 (1 HSPs)
scaffold0137 (64-152)||(21455-21544)
[»] scaffold0002 (1 HSPs)
scaffold0002 (92-153)||(98364-98425)
[»] scaffold0064 (1 HSPs)
scaffold0064 (88-154)||(60538-60606)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 23664274 - 23664087
Alignment:
Q  1 aatatgctcgaaaataagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcc 100  Q
    |||||||||||||||||||||||| |||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23664274 aatatgctcgaaaataagaaattgatgatatttttttgggccctttgttcctaataatgtgtttcactaatattaaaaatgttgaccatatttattatcc 23664175  T
Q  101 aagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664174 aagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 23664087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 25095118 - 25095290
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  25095118 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaatattgacggtatttattatccaagaaattgggataa 25095217  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  25095218 ttttcataacaaagcaaattctattttagttgaaaatgaggtgttaaaatttcagtctacttcgcatgtgcta 25095290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 17967453 - 17967303
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17967453 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 17967354  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  17967353 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 17967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 21906332 - 21906504
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  21906332 aagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaaaatatcgacaatatttattatccaagaaattgggataa 21906431  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  21906432 ttttcgtaacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 21906504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 5049408 - 5049580
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  5049408 aagaaattggtgatatttttttgggccctttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataa 5049507  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  5049508 ttttcgtaacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 5049580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 22070456 - 22070628
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||| |||||    
T  22070456 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaaaaaattgagataa 22070555  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||| ||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  22070556 ttttcataacagagcaaattctattttagttgaaaatagggtgctagaatttcagtctacttcgcatgtgcta 22070628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 48596481 - 48596331
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48596481 gggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattaggataattttcataacaaagcaaattct 48596382  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  48596381 attttagttgaaaatagtgtgctaaaatttcagtctacttcacatgtgcta 48596331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 27430916 - 27430769
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||| |||||||||||| ||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27430916 ccctttgctcctaataatgtacttcactaatactaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctatt 27430817  T
Q  141 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||| |||||  |||||||||||||||||| |||||||||    
T  27430816 ttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 27430769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 34307597 - 34307425
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  34307597 aagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatatttattattcaagaaattgggataa 34307498  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  34307497 ttttcgtaacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 34307425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 48999356 - 48999526
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  48999356 aagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataa 48999455  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| ||||  ||||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  48999456 ttttcgtaac--agcaaattctattttagttgaaaatagagtgctaaaatttcagtctacttcacatgtgcta 48999526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 49229460 - 49229351
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||| |||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  49229460 tttgttcttaataatgtgtttcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcataacaaaataaattatatttta 49229361  T
Q  144 gttgaaaatg 153  Q
    ||||||||||    
T  49229360 gttgaaaatg 49229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 5509980 - 5509869
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||||||| ||| ||||||||   |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5509980 ccctttgttcttaaaaatgtgctag-ctaatattaaaaatattggccatatttattatccaagaaattgggataattttcataacaaaataaattctatt 5509882  T
Q  141 ttagttgaaaatg 153  Q
    |||| ||||||||    
T  5509881 ttagatgaaaatg 5509869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 12027763 - 12027878
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||||||||||||||||||||||||||||||||||||||||| |||   ||||||||| || || |||||  ||| |||||||||||||| ||||||  |    
T  12027763 ggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattttcgaataaattttgatgattttcataacaaaacaaattaga 12027862  T
Q  139 ttttagttgaaaatgg 154  Q
    ||||||||||||||||    
T  12027863 ttttagttgaaaatgg 12027878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 5209809 - 5209695
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||||||||| ||||| | |||||||| ||||||| || |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |    
T  5209809 gggccatttgttcctgataattttcttcactactattaaacatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattat 5209710  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  5209709 attttagttgaaaat 5209695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 9023193 - 9023303
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    |||| ||| ||||||||||| ||||||||||||||||| | ||  |||||||||||||||  |||||||||| |||| |||||||| |||||||||||||    
T  9023193 ctttattcataataatgtgcctcactaatattaaaaatatcgatgatatttattatccaaataattgggatagttttaataacaaaacaaattctatttt 9023292  T
Q  143 agttgaaaatg 153  Q
    |||||||||||    
T  9023293 agttgaaaatg 9023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 36296668 - 36296785
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  36296668 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 36296767  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  36296768 attttagttgaaaatggg 36296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 24185782 - 24185677
Alignment:
Q  49 tcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttga 148  Q
    |||||||||||||  |||||| |||||||||| |||   ||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  24185782 tcctaataatgtgtctcactattattaaaaatattggtgatatttattgtccaagaaattgggataatttt-ataacaaaacaaattatattttagttga 24185684  T
Q  149 aaatggg 155  Q
    |||||||    
T  24185683 aaatggg 24185677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 42722203 - 42722320
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | |||||||||||||||       ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  42722203 gggccctttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 42722302  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  42722303 attttagttgaaaatggg 42722320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 28945948 - 28945832
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  28945948 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 28945849  T
Q  138 attttagttgaaaatgg 154  Q
    |||||||||||||||||    
T  28945848 attttagttgaaaatgg 28945832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 47397650 - 47397570
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa 124  Q
    ||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||| |||||||||||||||    
T  47397650 tttgttcctaataatgtgcatcactaatattaaaaatatcgatgatatttattatccaagaaattcggataattttcataa 47397570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 26465116 - 26465202
Alignment:
Q  104 aaattgggataattttcataacaaa--gcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  26465116 aaatagggataatttttataacaaaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 26465202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 48646129 - 48646232
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||| |||  ||||||||||| ||||| ||||||||||| |||   ||||||||||||||| |||||||||||||||||| |||||| |||||| |    
T  48646129 gggcccttagtttataataatgtgcctcactgatattaaaaatattggtgatatttattatccaataaattgggataattttcaaaacaaaacaaattat 48646228  T
Q  138 attt 141  Q
    ||||    
T  48646229 attt 48646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 26221650 - 26221766
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||| ||||||||| ||| ||||||||||| |||||  |    
T  26221650 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaatcttcataacaaaacaaataat 26221749  T
Q  138 attttagttgaaaatgg 154  Q
    |||||||| ||||||||    
T  26221750 attttagtagaaaatgg 26221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 44310430 - 44310518
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataaca 126  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| |||   ||||| |||||||| ||||||| ||||||||||||||||    
T  44310430 gggccgtttgttcctaataatgtgcctcactaatattgaaaatattggtgatattaattatccatgaaattgagataattttcataaca 44310518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 41665592 - 41665692
Alignment:
Q  52 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 151  Q
    ||||||||||| ||||||||| ||||||  ||||  |||||||||||| |||||||||| | || |||| |||||||| ||||| |||||||||||||||    
T  41665592 taataatgtgcctcactaatactaaaaaa-ttgatgatatttattatctaagaaattggaaaaactttcctaacaaagtaaattatattttagttgaaaa 41665690  T
Q  152 tg 153  Q
    ||    
T  41665691 tg 41665692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 12784098 - 12783987
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||| ||||| |||| |||||| ||||||||||||||||| |||    |||||||||||||| |||||| ||||||||| ||| |||| |||||| |    
T  12784098 gggccctatgttcttaattatgtgcctcactaatattaaaaatattggtagtatttattatccaaaaaattgcgataatttt-atagcaaaacaaattat 12784000  T
Q  138 attttagttgaaa 150  Q
    |||| ||| ||||    
T  12783999 atttaagtcgaaa 12783987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 47559629 - 47559565
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    |||||||||||| || |||||||||||||||| |||||||| |||||| |||||||||| ||||||    
T  47559629 atatttattatcaaaaaaattgggataatttt-ataacaaaacaaattatattttagttaaaaatg 47559565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 17385470 - 17385407
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||| | ||||||| || ||||||||||||||| ||||||||||||| |||||||||    
T  17385470 atatttattatcta-gaaattgagacaattttcataacaaaacaaattctatttttgttgaaaat 17385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 5578759 - 5578587
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  5578759 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataa 5578660  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| |||||    
T  5578659 ttttcataacaaagcaaattctattttagttgaaaatggggtgctaaaatttcagtctactttgcatatgcta 5578587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 13490368 - 13490515
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  13490368 ccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagatgattttcataacaaagcaaattctatt 13490467  T
Q  141 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13490468 ttagttgaaaatggggtgctaaaatttcagtctacttcgcatgtgcta 13490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 13382752 - 13382579
Alignment:
Q  15 taagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggata 114  Q
    ||||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13382752 taagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggata 13382653  T
Q  115 attttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  13382652 attttcgtaacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 13382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 23962803 - 23962975
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||||||||||| |||||||| ||||||||||||| |  || |||||||||||||||||||||| |||||    
T  23962803 aagaaattggtgatatttttttgggccctttgttcctaataacgtgcttcattaatattaaaaatatcaacgatatttattatccaagaaattgagataa 23962902  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  23962903 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 23962975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 2676918 - 2677089
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||  ||||||    
T  2676918 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataa 2677017  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||| |||||||||    
T  2677018 ttttcataacaaagcaaattcta-tttagttgaaaatatggtgctaaaatttcagtctacttcacatgtgcta 2677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 9409677 - 9409531
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9409677 ccttttttcctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattt 9409578  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||  ||||||| ||| |||   ||||||||||    
T  9409577 tagttgaaaatggggtgctaaaattttagtttaccatgcatgtgcta 9409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 42 - 188
Target Start/End: Original strand, 42879574 - 42879720
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  42879574 cctttattcctaataatgtgtttcactaatattaaaaatattgacgatattttttatccaagaaattgggataatttttataacaaagcaaattctattt 42879673  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||  ||||||| ||| ||||  ||||||||||    
T  42879674 tagttgaaaatggggtgctaaaattttagtttactatgcatgtgcta 42879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 38 - 183
Target Start/End: Original strand, 18889043 - 18889188
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||| || ||| |||    
T  18889043 gggccctttgctcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacagagaaaactct 18889142  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatg 183  Q
    | ||||||||||||| |||||  |||||||||||||||||||||||    
T  18889143 agtttagttgaaaatagggtgctaaaatttcagtctacttcgcatg 18889188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 13826347 - 13826235
Alignment:
Q  40 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 139  Q
    ||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13826347 gccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggataattttcataacaaaacaaattctat 13826248  T
Q  140 tttagttgaaaat 152  Q
    |||||||||||||    
T  13826247 tttagttgaaaat 13826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 39537540 - 39537378
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||| | |||  ||||||||||| ||          |||    
T  39537540 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcactgatattaaaaatatcgacgctatttattatcgaa----------taa 39537451  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  39537450 ttttcataacaaagcaaattttattttagttgaaaatggggtgctaaaatttcagtttacttcgcatgtgcta 39537378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29789522 - 29789637
Alignment:
Q  40 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 139  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| | |   ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  29789522 gccctttgttcctaaaaatgtgcctcactgatataaaaaatatcggtgatatttattatccaagaaattggaataattttcataacaaaacaaattctat 29789621  T
Q  140 tttagttgaaaatggg 155  Q
    ||||||||||||||||    
T  29789622 tttagttgaaaatggg 29789637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 13820989 - 13820881
Alignment:
Q  47 gttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagtt 146  Q
    |||||||||||||||  ||||||| ||||||||| |||  |||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  13820989 gttcctaataatgtgtctcactaacattaaaaatattggtcatatttattattcaagaaatttggataattttcataacaaaacaaaatctattttagtt 13820890  T
Q  147 gaaaatggg 155  Q
    |||||||||    
T  13820889 gaaaatggg 13820881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 8806430 - 8806333
Alignment:
Q  55 taatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    |||||||| ||||||||||||||||| ||   ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  8806430 taatgtgcctcactaatattaaaaatatttgtcatatttattatccaagaaattgggataatttt-ataacaaaacaaattatattttagttgaaaatg 8806333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 20892388 - 20892294
Alignment:
Q  46 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||||||||||| ||||||||||||||||| ||||  ||||||||| |||||||| ||||||||||||||| |||||| |||||||||||    
T  20892388 tgttcctaataatgtgcctcactaatattaaaaatattgatgatatttattttccaagaatttgggataattttcaaaacaaaacaaattctatt 20892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 38915843 - 38915730
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||   ||||||||||||||||||||||||||||||||| ||||||||  ||  | |    
T  38915843 gggccctttgttcctaataatgtgcctcactaatattaaatatattagtcatatttattatccaagaaattgggataatttt-ataacaaaaaaatatat 38915745  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  38915744 attttagttgaaaat 38915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 29149634 - 29149741
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||||||||||||||| ||| ||||||||||||| ||    ||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||    
T  29149634 tttgttcctaataatgtgcctcattaatattaaaaatatttgtgatatttattatccaaaaaattgagataattttcataac-aagcaaattttatttta 29149732  T
Q  144 gttgaaaat 152  Q
    |||||||||    
T  29149733 gttgaaaat 29149741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 16040315 - 16040198
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  |||||||| | |||||| |||   |||||| ||||| ||||||||| |||||||||||||||||| |||||  |    
T  16040315 gggccctttgttcctaataatgtgtctcactaatttaaaaaatattggtgatattttttatcaaagaaattgagataattttcataacaaaacaaatctt 16040216  T
Q  138 attttagttgaaaatggg 155  Q
    |||||| |||||||||||    
T  16040215 attttaattgaaaatggg 16040198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 38491012 - 38491129
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||| ||| ||||||||||||||| |||||| |    
T  38491012 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattat 38491111  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  38491112 attttagttgaaaatggg 38491129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 7850280 - 7850396
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  |||||| || ||||||||||||||| |||||| |    
T  7850280 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgagagaattttcataacaaaacaaattat 7850379  T
Q  138 attttagttgaaaatgg 154  Q
    |||||||||||||||||    
T  7850380 attttagttgaaaatgg 7850396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 5121316 - 5121205
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||   ||||||||||||||| ||||||  ||||||||||||| ||| |||||| ||||    
T  5121316 ccctttgttcctaataatgtggctcaataatattaaaaatattggtgatatttattatccaaaaaattgaaataattttcataataaaacaaattttatt 5121217  T
Q  141 ttagttgaaaat 152  Q
    ||| ||||||||    
T  5121216 ttaattgaaaat 5121205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 6769489 - 6769378
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| |||||||||||| ||| |||||||||| || |||| ||||||||||||||||||||||  || |||||| |||||||| |||||| |    
T  6769489 gggccctttgtttctaataatgtgcctcaataatattaaatatattgatcatatttattatccaagaaatt--gagaatttt-ataacaaaacaaattat 6769393  T
Q  138 attttagttgaaaat 152  Q
    ||||||||| |||||    
T  6769392 attttagttaaaaat 6769378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 43171523 - 43171438
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaa 128  Q
    |||| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||| | |||| ||||||||||||||||||    
T  43171523 cttttttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaatatattgagataattttcataacaaa 43171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 37134753 - 37134817
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  37134753 atatttattatctaagaaattggaataattttcataacaaaacaaattatattttagttgaaaat 37134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 3654677 - 3654762
Alignment:
Q  68 taatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatgg 154  Q
    ||||||||||||| ||||  |||||||||||||||||||||  ||||||||| || |||||  ||||| ||||||||||||||||||    
T  3654677 taatattaaaaatattgatgatatttattatccaagaaattaagataatttt-attacaaaataaattatattttagttgaaaatgg 3654762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 32698734 - 32698849
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||| ||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   ||    
T  32698734 ggccatttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgata 32698832  T
Q  139 ttttagttgaaaatggg 155  Q
    |||||||||||||||||    
T  32698833 ttttagttgaaaatggg 32698849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 4e-63; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 27861950 - 27861800
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27861950 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattggaataattttcataacaaagcaaattct 27861851  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  27861850 attttagttgaaaatggggtgctaaaatttcagtctacttcgcatgtgcta 27861800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 2554031 - 2554181
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  2554031 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattct 2554130  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  2554131 attttatttgaaaatggggtgctaaaatttcagtctacttcacatgtgcta 2554181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 44314172 - 44314022
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44314172 gggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattct 44314073  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  44314072 attttagttgaaaatagggtgctaaaatttcagtctacttcacatttgcta 44314022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 44322351 - 44322201
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44322351 gggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattct 44322252  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  44322251 attttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 44322201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 33015344 - 33015172
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||| ||||||| |||||||| ||||||||||||| | ||| ||||||||||||||| |||| |||||||    
T  33015344 aagaaattggtgatatttttttgggccctttgtttctaataaagtgcttcattaatattaaaaatatcgacgatatttattatccaataaatggggataa 33015245  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  33015244 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 33015172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 22576113 - 22575963
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22576113 gggccctttgttcctaataatttgcctcactaatattaaaaatatcgacgatatttattatccaaaaaattgggataattttcataacaaagcaaattct 22576014  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||||  ||||||| ||| ||||| | ||||||||    
T  22576013 attttagttgaaaatggggtgctaaaattttagtttactttgaatgtgcta 22575963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 41826093 - 41825943
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  41826093 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaaacaaattct 41825994  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| ||||||||||||||  |||||||| ||||||||| |||||||||    
T  41825993 attttatttgaaaatggggtgctaaaatttcggtctacttcacatgtgcta 41825943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 19685746 - 19685916
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  19685746 aagaaattggtgatatttttttgggccctttgctcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataa 19685845  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| ||||  ||||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||||    
T  19685846 ttttcgtaac--agcaaattctattttagttgaaaatagagtgctaaaatttcagtctacttcacatgtgcta 19685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 6221362 - 6221511
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |  || ||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  6221362 ggccttttgttcctaataatgtgcttcattaatattaaaaatatctacgatatttattatccaagaaatgaggataattttcataacaaagtaaattcta 6221461  T
Q  139 ttttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||| ||||| |||||  |||||||||||||||||| |||||||||    
T  6221462 ttttagttaaaaatagggtgctaaaatttcagtctacttcacatgtgcta 6221511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 38566328 - 38566216
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  38566328 gggccatttgttcctaataatgtgcgtcactaatattaaaaatattggtgatatttattatccaagaaattgggataattttcataacaaaacaaattat 38566229  T
Q  138 attttagttgaaa 150  Q
    |||||||||||||    
T  38566228 attttagttgaaa 38566216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 33054748 - 33054862
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||| |||||  |||||||||||||||||| |||||| |    
T  33054748 gggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattatgataattttcataacaaaacaaattat 33054847  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  33054848 attttagttgaaaat 33054862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 19091312 - 19091195
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||   |||||||||||| |||||||| | ||||||||||||||||| |||||| |    
T  19091312 gggccctttgttcctaataatgtgcctcaataatattaaaaatattggtgatatttattatctaagaaatttgtataattttcataacaaaacaaattat 19091213  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  19091212 attttagttgaaaatggg 19091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 41302576 - 41302463
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |    
T  41302576 gggccctttgttcgtaataatgtgcctcactaatattacaaatattgttgatatttattatccaaaaaattgggataattttcataacaaaacaaattat 41302477  T
Q  138 attttagttgaaaa 151  Q
    ||||||||| ||||    
T  41302476 attttagttcaaaa 41302463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 38423087 - 38422950
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||| ||||||||  ||||||| ||||  |||||||||||||||||||||| || ||    
T  38423087 aagaaattggtgatatatttttgggccctttgttcctaataatgtgcctcactaattataaaaatattgatgatatttattatccaagaaattgagagaa 38422988  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatg 153  Q
    | ||||||||||| |||||  |||||||||||||||||    
T  38422987 tcttcataacaaaacaaatgatattttagttgaaaatg 38422950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 10022892 - 10022997
Alignment:
Q  45 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 144  Q
    |||||||||||||||||| |||||||||| |||||| |||   |||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||    
T  10022892 ttgttcctaataatgtgcctcactaatataaaaaatattggggatatttattatccaagaaattgagataattttcataacaaaacaaaatatattttag 10022991  T
Q  145 ttgaaa 150  Q
    ||||||    
T  10022992 ttgaaa 10022997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 11199414 - 11199297
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| | ||  ||||||||||| |||||||||| ||| ||||||| | |||| ||||||||    
T  11199414 gggccttttgttcctaataatgtgcctcattaatattaaaaatatcgatgatatttattatgcaagaaattgagatgattttcaaagcaaaacaaattct 11199315  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  11199314 attttagttgaaaatggg 11199297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 24484451 - 24484566
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||||||||||||||||||| | ||||||||||||||| ||    ||||||||||||||||||||||  ||||||| ||||||||| |||||| |    
T  24484451 gggccttttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattat 24484550  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  24484551 attttagttgaaaatg 24484566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 14903999 - 14904113
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||    |||||||||||||||  |||| ||||||||||||| ||||| |||||| |    
T  14903999 gggcccattattcctaataatgtgcttcactaatattaaaaatattcgtgatatttattatccaatgaattaggataattttcatgacaaaacaaattat 14904098  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  14904099 attttagttgaaaat 14904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 41423004 - 41422922
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||| |||||||||||||    
T  41423004 gggccctttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaagaaactgggataattttc 41422922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 7880488 - 7880371
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  7880488 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 7880389  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  7880388 attttagttgaaaatggg 7880371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 13597989 - 13597889
Alignment:
Q  52 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 151  Q
    ||||||||||| || |||||||||||||| |||  |||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  13597989 taataatgtgcctcgctaatattaaaaatattggtcatatttattatccaagaaaatgggataatttt-ataacaaaacaaattatattttagttgaaaa 13597891  T
Q  152 tg 153  Q
    ||    
T  13597890 tg 13597889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 30386835 - 30386945
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||||||||||||||  ||||||||||||||||| | |   ||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||    
T  30386835 tttgttcctaataatgtgtctcactaatattaaaaatatcggtgatatttattatccaagaaattaggataatttt-ataacaaaacaaattatatttta 30386933  T
Q  144 gttgaaaatggg 155  Q
    ||| ||||||||    
T  30386934 gttaaaaatggg 30386945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 45277620 - 45277506
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  45277620 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 45277521  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  45277520 attttagttgaaaat 45277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 19677994 - 19678111
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| |||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  19677994 gggccctttgtttctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 19678093  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  19678094 attttagttgaaaatggg 19678111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 6882973 - 6883088
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataac--aaagcaaatt 135  Q
    ||||| ||||||| ||||||||||  |||| |||||||||||| |||   ||| |||||||||||||||||| |||||||||||||||  |||  |||||    
T  6882973 gggccatttgttcttaataatgtgtctcacaaatattaaaaatattggtgatacttattatccaagaaattgagataattttcataacaaaaaaaaaatt 6883072  T
Q  136 ctattttagttgaaaa 151  Q
     |||||||||||||||    
T  6883073 atattttagttgaaaa 6883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 9057380 - 9057484
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    ||||||| |||||||||||| ||||||| |||||| || |||  ||||||||||||||||||||||| ||||||||| || ||||| |||||| ||||||    
T  9057380 ctttgtttctaataatgtgcctcactaaaattaaatatattggtcatatttattatccaagaaattgagataatttt-at-acaaaacaaattatatttt 9057477  T
Q  143 agttgaa 149  Q
    | |||||    
T  9057478 aattgaa 9057484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 2565587 - 2565704
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  2565587 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 2565686  T
Q  138 attttagttgaaaatggg 155  Q
    |||||||| |||||||||    
T  2565687 attttagtagaaaatggg 2565704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29303144 - 29303259
Alignment:
Q  40 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 139  Q
    ||||||| ||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| | | |||||| |||||| |||    
T  29303144 gccctttattcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctaagaacaaaacaaattatat 29303243  T
Q  140 tttagttgaaaatggg 155  Q
    ||||||||||||||||    
T  29303244 tttagttgaaaatggg 29303259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 41422921 - 41422863
Alignment:
Q  95 ttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    |||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  41422921 ttatccaagaaattggaataattttcataacaaaataaattatattttagttgaaaatg 41422863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 25621421 - 25621529
Alignment:
Q  45 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 144  Q
    ||||||||| | |||||||||||||||||||| ||| ||    ||| ||||||||||| |||||| || | |||||||| |||| |||||| ||||||||    
T  25621421 ttgttcctacttatgtgcttcactaatattaacaatattagtgatacttattatccaataaattgagaca-ttttcatagcaaaacaaattatattttag 25621519  T
Q  145 ttgaaaatgg 154  Q
    ||||||||||    
T  25621520 ttgaaaatgg 25621529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 18781308 - 18781194
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  ||||    
T  18781308 ccctttgttactaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatatt 18781209  T
Q  141 ttagttgaaaatggg 155  Q
    ||||| |||||||||    
T  18781208 ttagtagaaaatggg 18781194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 9425278 - 9425217
Alignment:
Q  90 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 151  Q
    |||||||||||||||||||| || ||| ||||||||||| |||||  |||||||||||||||    
T  9425278 atttattatccaagaaattgagagaatcttcataacaaaacaaatgatattttagttgaaaa 9425217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 25416117 - 25416074
Alignment:
Q  111 gataattttcataacaaagcaaattctattttagttgaaaatgg 154  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  25416117 gataattttgataacaaagcaaattatattttagttgaaaatgg 25416074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 31549236 - 31549172
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaat 80  Q
    |||||||||||||||       ||||| ||||||||||||||||||| |||||||||||||||||    
T  31549236 aagaaattggtgatatttttttgggccatttgttcctaataatgtgcctcactaatattaaaaat 31549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 43673397 - 43673290
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||| ||||||||||| ||| ||||  ||||||| ||||  ||||||||||||| ||||||   || ||| ||| ||||||| |||||| ||||| |    
T  43673397 tttgttcataataatgtgcctcaataattataaaaatattgatgatatttattatccgagaaatatagagaatcttcctaacaaaacaaattatatttga 43673298  T
Q  144 gttgaaaa 151  Q
    ||||||||    
T  43673297 gttgaaaa 43673290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 25416163 - 25416124
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaat 80  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  25416163 ccctttgttcctaataatgtgtctcactaatattaaaaat 25416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 1981549 - 1981721
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  1981549 aagaaattggtgatatttttttgggctctttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataa 1981648  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  1981649 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 1981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 3762650 - 3762822
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||| |  || ||||||||||||||||||||||||||||    
T  3762650 aagaaattggtgatatttttttgggccctttgttcctaataatgtgtttcactaatattaaaaatatctacgatatttattatccaagaaattgggataa 3762749  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  3762750 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 3762822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 45117419 - 45117591
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  45117419 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgggataa 45117518  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  45117519 ttttcataacaaagcaaattatattttagttgaaaatagggtgctaaaatttcagtctacttcgcatttgcta 45117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 16729683 - 16729855
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||| ||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  16729683 aagaaattggtgatatttttttgggcccttttttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataa 16729782  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||| |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||    
T  16729783 ttttcttaacaaagcaaattctattttagttgaaaatgggctactaaaatttcagtctacttcgcatgtgcta 16729855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 31597475 - 31597647
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  31597475 aagaaattggtgatatttttttgggccctttactcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataa 31597574  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||    
T  31597575 ttttcataacaaagcaaattctattttagttgaaaatagggtgccaaaatttcattctacttcacatgtgcta 31597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 4432201 - 4432051
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4432201 gggccgtttgttcctaataatgtacttcactaatattaaaaatattgacaatatttattatccaagaaattgggataattttcataacaaagcaaatttt 4432102  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||  |||  ||||||| ||||||||||||||||||||    
T  4432101 attttagttgaaaatgaagtgctaaaatttaagtctacttcgcatgtgcta 4432051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 40971420 - 40971567
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||||||| |||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  40971420 ccctttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattctatt 40971519  T
Q  141 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  40971520 ttatttgaaaatggggtgctaaaatttcagtctacttcacatgtgcta 40971567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 7973106 - 7972960
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    |||||||| |||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7973106 cctttgtttctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattt 7973007  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||  ||||||| ||| |||   ||||||||||    
T  7973006 tagttgaaaatggggtgctaaaattttagtttaccatgcatgtgcta 7972960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 39906226 - 39906359
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  39906226 cctttgttcctaataatgtgcttcactaatattaaaaatatcgacgttatttattatccaataaattggaataatttttataacaaagcaaattctattt 39906325  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctac 175  Q
    |||||||||||||||||  |||||||||||||||    
T  39906326 tagttgaaaatggggtgctaaaatttcagtctac 39906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 7263761 - 7263611
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| |||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  7263761 gggccctttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagtaaattct 7263662  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| |||| |||||||||  ||||||||||||| ||||| ||||||||    
T  7263661 attttatttgataatggggtgctaaaatttcagtctgcttcggatgtgcta 7263611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 9137509 - 9137625
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattg-ggataattttcataacaaagcaaattc 136  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||||||||||| ||||||     
T  9137509 gggccctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtggataattttcataacaaaacaaatta 9137608  T
Q  137 tattttagttgaaaatg 153  Q
    |||||||||||||||||    
T  9137609 tattttagttgaaaatg 9137625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 9382351 - 9382238
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||| ||||||||||||||||||||||||||||||||| |||   ||||||| |||| ||  |||||||||||||||||||||||| |||||| ||||    
T  9382351 ccctttattcctaataatgtgcttcactaatattaaaaatattggtgatatttactatctaatgaattgggataattttcataacaaaacaaattatatt 9382252  T
Q  141 ttagttgaaaatgg 154  Q
    ||||||||||||||    
T  9382251 ttagttgaaaatgg 9382238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 24190474 - 24190359
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||| |||||||| ||||| | ||| ||| ||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||||| |||||| |    
T  24190474 gggctctttgttcataatattatgcctcagtaatattaaaaatattgatgatatttattatccaagaaattgggataatttttataacaaaacaaattat 24190375  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  24190374 attttagttgaaaatg 24190359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 11648876 - 11648767
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||||||||||||||| ||||||||||||||||| |||   |||||||||||| ||||||||| ||||||||| |||||||| |||||| |||||||    
T  11648876 tttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatcaaagaaattgagataatttt-ataacaaaacaaattatatttta 11648778  T
Q  144 gttgaaaatgg 154  Q
    |||||||||||    
T  11648777 gttgaaaatgg 11648767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 6927675 - 6927561
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  6927675 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 6927576  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  6927575 attttagttgaaaat 6927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 28509226 - 28509343
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||| ||| ||||||||||||||| |||||| |    
T  28509226 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattat 28509325  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  28509326 attttagttgaaaatggg 28509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 32073246 - 32073349
Alignment:
Q  51 ctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaa 150  Q
    |||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| |||||| ||   |||||| | |||| ||||||||||||||    
T  32073246 ctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtgataatctttgcaacaaaacgaattatattttagttgaaa 32073345  T
Q  151 atgg 154  Q
    ||||    
T  32073346 atgg 32073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 2879346 - 2879229
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  2879346 gggccctttgtttctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 2879247  T
Q  138 attttagttgaaaatggg 155  Q
    |||||||| |||||||||    
T  2879246 attttagtagaaaatggg 2879229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 2807817 - 2807702
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||||||||||| ||||||||||  | ||||||||||||||| ||    ||| ||||||||||  |||||| || ||| |||| ||| || |||||| ||    
T  2807817 ggccctttgttcataataatgtgtcttactaatattaaaaatatttgtgataattattatccagaaaattgtgagaatcttcacaacgaaacaaattata 2807718  T
Q  139 ttttagttgaaaatgg 154  Q
    ||||||||||||||||    
T  2807717 ttttagttgaaaatgg 2807702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 24682594 - 24682704
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||  | ||||||||||| ||| ||    |||||||||||| |  ||||||||| ||| |||||||| || |||||| |||||    
T  24682594 cctttgttcctaataatgtgtcttactaatattaagaatatttgtgatatttattatctagaaaattgggaaaatattcataacgaaacaaattatattt 24682693  T
Q  142 tagttgaaaat 152  Q
    |||| ||||||    
T  24682694 tagtcgaaaat 24682704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 28374688 - 28374579
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    |||||||| |||| ||||||  ||| ||||||||||||| |||   ||||||||||| ||||||||| | |||||||| ||||| ||  ||||| |||||    
T  28374688 cctttgttgctaagaatgtgtctcattaatattaaaaatattgtg-atatttattattcaagaaatttgaataatttt-ataaccaaataaattatattt 28374591  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  28374590 tagttgaaaatg 28374579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 602316 - 602275
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaa 79  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  602316 gggccctttgttcttaataatgtgcctcactaatattaaaaa 602275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 23232351 - 23232238
Alignment:
Q  40 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa-caaagcaaattcta 138  Q
    |||||||||| |||||| ||||| || | |||||||||||| |||   |||||||||||  |||||||| |||||| ||| |||| ||||  ||||| ||    
T  23232351 gccctttgtttctaatattgtgcctcgccaatattaaaaatattggtgatatttattattgaagaaattaggataacttt-ataaccaaaataaattata 23232253  T
Q  139 ttttagttgaaaatg 153  Q
    ||||| |||||||||    
T  23232252 ttttaattgaaaatg 23232238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 6e-59; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 10095173 - 10095001
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10095173 aagaaattggtgatatttttttgggctctttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataa 10095074  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||| |||||||||    
T  10095073 ttttcataacaaagcaaattctattttaattgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 10095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 7413872 - 7413723
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  7413872 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaa-aaagaaaattct 7413774  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  7413773 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 7413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 7459953 - 7459804
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  7459953 gggccctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaa-aaagaaaattct 7459855  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  7459854 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 7459804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 39480376 - 39480230
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39480376 cctttgttcctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattt 39480277  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||  ||||||| ||| |||   ||||||||||    
T  39480276 tagttgaaaatggggtgctaaaattttagtttaccatgcatgtgcta 39480230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 6261706 - 6261592
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6261706 cctttgttcctaataatgtgcttcactaatattaaaaatattgatgatattttttattcaataaattgggataattttcataacaaagcaaattctattt 6261607  T
Q  142 tagttgaaaatgggg 156  Q
    ||||| |||||||||    
T  6261606 tagttaaaaatgggg 6261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 52458991 - 52459108
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  52458991 gggccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattct 52459090  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  52459091 attttagttgaaaatggg 52459108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 52460248 - 52460365
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  52460248 gggccctttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattct 52460347  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  52460348 attttagttgaaaatggg 52460365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 10142121 - 10142235
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||| |||||||||||||||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  10142121 ccctttgtttctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattatatt 10142220  T
Q  141 ttagttgaaaatggg 155  Q
    ||| |||||||||||    
T  10142221 ttacttgaaaatggg 10142235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 1843287 - 1843172
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||   ||||| |||||| |||||||||||||||||||||||||||| |||||| |    
T  1843287 gggccctttgttcctaataatgtgcctcactaatattaaaaatattggagatattcattatctaagaaattgggataattttcataacaaaacaaattat 1843188  T
Q  138 attttagttgaaaatg 153  Q
    ||||| ||||||||||    
T  1843187 atttttgttgaaaatg 1843172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 13957225 - 13957339
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||    ||||||||||||||| ||||||||||||||||| ||||||| |||||| |    
T  13957225 gggccctttgttcctaataatgtgcttcactaatatgaaaaatattagtgatatttattatccaataaattgggataattttcgtaacaaaacaaattat 13957324  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  13957325 attttagttgaaaat 13957339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 9921977 - 9921865
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||| |||||||||||||  ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||    
T  9921977 ccctttggtcctaataatgtgtctcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcgtaataaaacaaattatatt 9921878  T
Q  141 ttagttgaaaatg 153  Q
    |||||||||||||    
T  9921877 ttagttgaaaatg 9921865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 188
Target Start/End: Original strand, 36213712 - 36213857
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttatt-atccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||| |||||| || ||| ||||||||||||||||||  |||||||| |||||||||||    
T  36213712 cctttattcctaataatgtgcttcactaatattaaaa-tattgacgatatttttttatctaagaaattgggataattta-ataacaaaacaaattctatt 36213809  T
Q  141 ttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||  ||||||| ||| ||||  ||||||||||    
T  36213810 ttagttgaaaatggggtgctaaaattttagtttactatgcatgtgcta 36213857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 42512344 - 42512245
Alignment:
Q  54 ataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    ||||| ||||||||||||||||||||| |||   ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  42512344 ataatttgcttcactaatattaaaaatattggggatatttattatccaataaattgggataattttcataacaaaacaaattatattttagttgaaaatg 42512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 3665589 - 3665477
Alignment:
Q  40 gccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctat 139  Q
    |||||||||||| |||||| ||  ||||||||||||||| | | ||  ||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  3665589 gccctttgttccaaataatatgtctcactaatattaaaa-tatcgatgatatttattattcaagaaattgagataattttcataacaaaacaaattctat 3665491  T
Q  140 tttagttgaaaatg 153  Q
    ||||||||||||||    
T  3665490 tttagttgaaaatg 3665477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 51337617 - 51337734
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||| |||||||||| ||  | ||||||||||||||| |     ||||||||||||||| ||||||||| ||||||||||||||| |||||| |    
T  51337617 gggccctttggtcctaataatatgtcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataacaaaacaaattat 51337716  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  51337717 attttagttgaaaatggg 51337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 24611430 - 24611366
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  24611430 atatttattatccaagaaattgagataattttcataacaaaacaaattctattttagttgaaaat 24611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 28143584 - 28143468
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  28143584 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 28143485  T
Q  138 attttagttgaaaatgg 154  Q
    |||||||||||||||||    
T  28143484 attttagttgaaaatgg 28143468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 29283139 - 29283029
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| |||||||||||| |||||||||||||| || |||   |||||||||||||||||||||| ||||||||| ||||||||  ||||| |    
T  29283139 gggccctttgtttctaataatgtgcctcactaatattaaatatattggtaatatttattatccaagaaattgagataatttt-ataacaaaataaattat 29283041  T
Q  138 attttagttgaa 149  Q
    |||||| |||||    
T  29283040 attttaattgaa 29283029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 10373495 - 10373385
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    |||| |||| |||||||| | ||||||||||||||||| |||  |||||| ||||| |||||||||| ||||||||| |||| ||| |||||| ||||||    
T  10373495 ctttcttccgaataatgtccctcactaatattaaaaatattggtcatattcattatacaagaaattgagataatttt-ataataaaacaaattatatttt 10373397  T
Q  143 agttgaaaatgg 154  Q
    ||||||||||||    
T  10373396 agttgaaaatgg 10373385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 41509310 - 41509209
Alignment:
Q  50 cctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaa 149  Q
    ||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| || |||||| ||||| || |||||| |||||||||||||    
T  41509310 cctaataatgtgtctcactaatattaaaaatattggtaatatttattatccaagaaattgagacaatttt-ataactaaacaaattatattttagttgaa 41509212  T
Q  150 aat 152  Q
    |||    
T  41509211 aat 41509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 14192452 - 14192335
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  14192452 gggccctttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 14192353  T
Q  138 attttagttgaaaatggg 155  Q
    |||||||| |||||||||    
T  14192352 attttagtagaaaatggg 14192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 23935903 - 23935828
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataat 116  Q
    |||||| ||||||||||||||| ||||||||||||| ||| |||   ||||||||||||||||||||||| |||||    
T  23935903 ccctttattcctaataatgtgcctcactaatattaataatattggtgatatttattatccaagaaattggaataat 23935828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 21319991 - 21320104
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaa-tgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||||||||||||||  ||||| |||| ||||| |  ||   |||||||||| |||| ||||| |||||||||| |||||||| |||||| ||||    
T  21319991 cctttgttcctaataatgtgtctcactgatataaaaaaataatggtgatatttattaaccaataaattaggataatttt-ataacaaaacaaattatatt 21320089  T
Q  141 ttagttgaaaatggg 155  Q
    |||||||||||||||    
T  21320090 ttagttgaaaatggg 21320104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 25201039 - 25201099
Alignment:
Q  92 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||||||||| |||||    
T  25201039 ttattatccaagaaattgggataattttcataacaaaacaaaagatattttagttaaaaat 25201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 9900187 - 9900076
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    |||||||||||| |||||    ||||| ||||||||||| |||   |||||||  ||| ||||||||||||||||||||||||  || | |||| |||||    
T  9900187 cctttgttcctattaatgcatctcactgatattaaaaatattggtgatatttaccatctaagaaattgggataattttcataatgaaacgaattatattt 9900088  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  9900087 tagttgaaaatg 9900076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 51890508 - 51890447
Alignment:
Q  91 tttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||| ||||||| || ||||||||||||||  ||||| ||||||||||||||||    
T  51890508 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaat 51890447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 51890782 - 51890721
Alignment:
Q  91 tttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||| ||||||| || ||||||||||||||  ||||| ||||||||||||||||    
T  51890782 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaat 51890721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 56366999 - 56366889
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   |||||    
T  56366999 cctttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgatattt 56366901  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  56366900 tagttgaaaatg 56366889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 24612105 - 24612043
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatcc 100  Q
    |||| ||||||||||||||||||   ||||||||||||||||| | ||  |||||||||||||    
T  24612105 gggcactttgttcctaataatgtatctcactaatattaaaaatatcgatgatatttattatcc 24612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 51890967 - 51890934
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatatt 74  Q
    |||||||||||||||||||| |||||||||||||    
T  51890967 ccctttgttcctaataatgttcttcactaatatt 51890934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 6e-59; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 10994300 - 10994128
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  10994300 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgggataa 10994201  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  10994200 ttttcataacaaagcaaattatattttagttgaaaatagggtgctaaaatttcagtctacttcgcatttgcta 10994128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 27941645 - 27941495
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27941645 gggccctttgttcctaattatgtgcttcattaatattaaaaatatcgaagatatttattatccaagaaattgggataattttcataacaaagcaaattct 27941546  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  27941545 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 27941495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 53077097 - 53076947
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53077097 gggccctttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 53076998  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  53076997 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 53076947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 25071596 - 25071768
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||    
T  25071596 aagaaattggtgatatttttttgggcccttttttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataa 25071695  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||| ||||||||||||||||||||||||| |||||  | |||||||||||||||| |||||||||    
T  25071696 ttttcataacagagcaaattctattttagttgaaaatagggtgctataatttcagtctacttctcatgtgcta 25071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 19157068 - 19157218
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  19157068 gggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataattttcataacaaaacaaattct 19157167  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  19157168 attttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 19157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 52448118 - 52448268
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| |||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  52448118 gggccctttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgatataattttcattacaaagcaaattct 52448217  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  52448218 attttatttgataatggggtgctaaaatttcagtctacttcgcatgtgcta 52448268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 15760838 - 15760981
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||| |||||| ||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  15760838 cctttgttcttaataacgtgcttcactaattttaaaaatatcgacgatatttattatccaagaaattgggataattttcataacatagcaaattttattt 15760937  T
Q  142 tagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 185  Q
    ||||||||||||| |||  |||||||| ||||||||| ||||||    
T  15760938 tagttgaaaatggagtgctaaaatttccgtctacttcacatgtg 15760981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 29713781 - 29713896
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||   |||||||||||| |||||||||||||||||||||||||||| |||||| |    
T  29713781 gggccctttgttactaataatgtgcctcactaatattaaaaatattggtgatatttattatctaagaaattgggataattttcataacaaaacaaattat 29713880  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  29713881 attttagttgaaaatg 29713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 47184918 - 47185056
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||| ||||||||||||| |||||||||||||| |||| |||   ||||||||||||||| ||||||||||||    
T  47184918 aagaaattggtgatatttatttgggccctttcttcctaataatgttcttcactaatattacaaatattggtgatatttattatccaataaattgggataa 47185017  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatgg 154  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  47185018 ttttcataacaaaacaaattatattttagttgaaaatgg 47185056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 1698398 - 1698508
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    |||||||| |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  1698398 cctttgtttctaataatgtgcttcactaatattaaaaatatcgatgatatttattatccaagaaattgagataattttcctaacaaaacaaattctattt 1698497  T
Q  142 tagttgaaaat 152  Q
     ||||||||||    
T  1698498 aagttgaaaat 1698508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 10993200 - 10993086
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||| ||||||||||||||||||| ||||||  |    
T  10993200 ggccttttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaagaaatttggataattttcataacaaaacaaatttca 10993101  T
Q  139 ttttagttgaaaatg 153  Q
    |||||||||||||||    
T  10993100 ttttagttgaaaatg 10993086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 44663446 - 44663338
Alignment:
Q  45 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 144  Q
    |||||||||||||||||| |||||||||||||| || |||   ||||||||||||||||||||||  |||||||||| |||||| |||||| ||||||||    
T  44663446 ttgttcctaataatgtgcctcactaatattaaatatattggtgatatttattatccaagaaattgaaataattttcaaaacaaaacaaattatattttag 44663347  T
Q  145 ttgaaaatg 153  Q
    |||||||||    
T  44663346 ttgaaaatg 44663338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 11640117 - 11640005
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||| ||| |||| |||| | ||||||||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  11640117 cctttattcataatgatgtacctcactaatattaaaaatatcgatgatatttattattcaagaaattgggataattttcataacaaaataaattttattt 11640018  T
Q  142 tagttgaaaatgg 154  Q
    |||||||||||||    
T  11640017 tagttgaaaatgg 11640005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 30191298 - 30191185
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||| ||| |||||||||||||| ||||||||||||||| || ||   |||||||||||||||| |||||| ||||||||| ||||||||  ||||| |    
T  30191298 gggccatttattcctaataatgtgtttcactaatattaaatatattagtcatatttattatccaaaaaattgagataatttt-ataacaaaagaaattat 30191200  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  30191199 attttagttgaaaat 30191185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 3918234 - 3918145
Alignment:
Q  64 tcactaatattaaaaatgttgaccatatttattatccaagaaa-ttgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||||||||||||   |||||||| |||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  3918234 tcactaatattaaaaatgttggtgatatttatcatccaaaaaagttgggataattctcataacaaaacaaattctattttagttgaaaat 3918145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 23045025 - 23044908
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||| ||||||||||||||  | ||||||||||||||  |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  23045025 gggccctttattcctaataatgtgtcttactaatattaaaaagatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 23044926  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  23044925 attttagttgaaaatggg 23044908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 31885085 - 31884968
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| ||||||||||  ||||| |    
T  31885085 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggaaaattctcataacaaaataaattat 31884986  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  31884985 attttagttgaaaatggg 31884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 12893035 - 12893141
Alignment:
Q  48 ttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttg 147  Q
    ||||||| || |||| |||||||||||||| || |||   || ||||||||||||||||||| ||||||||| |||| ||| || |||||||||||||||    
T  12893035 ttcctaagaacgtgcctcactaatattaaatatattggtgatgtttattatccaagaaattgagataatttttataagaaaacatattctattttagttg 12893134  T
Q  148 aaaatgg 154  Q
    |||||||    
T  12893135 aaaatgg 12893141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 24927979 - 24927913
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaaga 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  24927979 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaaga 24927913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 53472148 - 53472211
Alignment:
Q  90 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||    
T  53472148 atttattatccaagaaattgagataattttaataacaaaacaaattatattttagttgaaaatg 53472211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 1424675 - 1424782
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||||||||||||||||||| |||||||||||| | ||  |   | ||||||||||||||||||||||||||||||| ||||||||  ||| | ||||    
T  1424675 ccctttgttcctaataatgtgcctcactaatattatatat--tagtcgtatttattatccaagaaattgggataatttt-ataacaaa-aaaaatatatt 1424770  T
Q  141 ttagttgaaaat 152  Q
    ||||||||||||    
T  1424771 ttagttgaaaat 1424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 40145441 - 40145552
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| |||||||||||| ||||||| |||||| |  |||  ||||||||||||||||||| ||||   || ||| |||||||| |||||| |    
T  40145441 gggccctttgtttctaataatgtgcctcactaacattaaatacattgttcatatttattatccaagaatttgg---aaattttataacaaaacaaattat 40145537  T
Q  138 attttagttgaaaat 152  Q
    ||||||||| |||||    
T  40145538 attttagttcaaaat 40145552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 6024894 - 6024777
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| ||||||||||   | ||||||||||||||| |     ||||||||||||||  ||||||||| ||| ||||||||||| |||||  |    
T  6024894 gggccctttgttgctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataat 6024795  T
Q  138 attttagttgaaaatggg 155  Q
    |||||||| |||||||||    
T  6024794 attttagtagaaaatggg 6024777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 17147208 - 17147296
Alignment:
Q  53 aataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    |||||||||  ||||||||||||||||| |||   ||||||||||||||||||||||| |||| ||||||||||||  ||||| ||||||    
T  17147208 aataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattggaataa-tttcataacaaaataaattatatttt 17147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 16876999 - 16876891
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||| |||||||||||  |  ||||||||||| || |||  ||||||||||||||||||||||  || |||||| |||||||| |||||  ||||    
T  16876999 ccctttgtttctaataatgtgtcttgctaatattaaatatattggtcatatttattatccaagaaatt--gagaatttt-ataacaaaacaaataatatt 16876903  T
Q  141 ttagttgaaaat 152  Q
    ||||||||||||    
T  16876902 ttagttgaaaat 16876891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 4127549 - 4127612
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||| | | ||||||||||||||    
T  4127549 atatttattatccaagaaattgagataattttcttaacaaa-caaagtattttttagttgaaaat 4127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 6583948 - 6584059
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||| ||||||||||||||  | ||||||||||||||| ||    ||||||| ||||||  ||||| ||| ||| ||||  |||||  ||||| |||||    
T  6583948 cctttattcctaataatgtgtcttactaatattaaaaatatttgtgatatttaatatccataaaatttggagaatcttcaccacaaaataaattatattt 6584047  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  6584048 tagttgaaaatg 6584059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 4127314 - 4127348
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaa 78  Q
    ||||||||||||||||||| |||||||||||||||    
T  4127314 tttgttcctaataatgtgcctcactaatattaaaa 4127348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 113; Significance: 4e-57; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 182
Target Start/End: Complemental strand, 87762 - 87618
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  87762 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacgaagcaaattct 87663  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcat 182  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  87662 attttagttgaaaatggggtgctaaaatttcagtctacttcgcat 87618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 182
Target Start/End: Complemental strand, 89188 - 89044
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  89188 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattct 89089  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcat 182  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  89088 attttagttgaaaattgggtgctaaaatttcagtctacttcgcat 89044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 88236 - 88096
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  88236 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattct 88137  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttc 178  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  88136 attttagttgaaaattgggtgctaaaatttcagtctacttc 88096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 88712 - 88572
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  88712 gggccctttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattct 88613  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttc 178  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  88612 attttagttgaaaattgggtgctaaaatttcagtctacttc 88572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 18675306 - 18675475
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       |||||||||||||||||||| ||| |||||||||||||||||| ||| | ||||||||||||||||||||| ||||||    
T  18675306 aagaaattggtgatatttttttgggccctttgttcctaataacgtgtttcactaatattaaaaatattgtcgatatttattatccaagaaattaggataa 18675405  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  18675406 ttttcataacaaagcaaattctattttagttaaaaatggggtgctaaaatttcagtctacttcgcatgtg 18675475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 34043497 - 34043669
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||| ||||| ||||||||||||| | ||| |||||||||||||||||||| |||||||    
T  34043497 aagaaattggtgatatttttttgggccctttgttcctaataatgttcttcattaatattaaaaatatcgacgatatttattatccaagaaatggggataa 34043596  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||    
T  34043597 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtgcta 34043669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 22012245 - 22012095
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22012245 gggccctttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattct 22012146  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||| |||||  |||||||||||||||||| ||| |||||    
T  22012145 attttagttgaaaatagggtgctaaaatttcagtctacttcacatatgcta 22012095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 1422908 - 1423077
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||| |||| ||| |||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  1422908 aagaaattggtgatatttttttgggccctttgttcctgataacgtgtttcactaatattaaaaatattgatgatatttattatccaagaaattgggataa 1423007  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 185  Q
    ||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||| ||| ||||||    
T  1423008 ttttcataacaaagcaaattctattttagttgaaaattgggtactaaaatttcagtctagttctcatgtg 1423077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 1603323 - 1603494
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||  ||||||    
T  1603323 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataa 1603422  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||| |||||||||    
T  1603423 ttttcataacaaagcaaattcta-tttagttgaaaatatggtgctaaaatttcagtctacttcacatgtgcta 1603494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 1131749 - 1131895
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||| ||| | ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1131749 gggcccttttttcttgataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataataaagcaaattct 1131848  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgt 184  Q
    ||||||||||||||||||  || ||||||||| |||||||| |||||    
T  1131849 attttagttgaaaatgggccgttaaaatttcaatctacttcacatgt 1131895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 20990412 - 20990564
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaa--tt 135  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||||||||  ||    
T  20990412 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaatttt 20990511  T
Q  136 ctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
     ||||||  || | |||||||||  ||||||||||||||||||||||||||||    
T  20990512 ttatttttttttataatggggtgctaaaatttcagtctacttcgcatgtgcta 20990564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 11680986 - 11680871
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||| ||||||| ||||||||||||||||| |||||| |    
T  11680986 gggcccttttttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattggaataattttcataacaaaacaaattat 11680887  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  11680886 attttagttgaaaatg 11680871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 21442662 - 21442762
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgct 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||||| ||||||||    
T  21442662 atatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatagggtgctaaaattctagtctacttcacatgtgct 21442761  T
Q  188 a 188  Q
    |    
T  21442762 a 21442762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 31129720 - 31129834
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||| |||||| |||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||| | ||||      
T  31129720 gggccctttgttcttaataatgtgcctcactagtattaaaaatattgatgatatttattatcaaagaaattgggataattttcataacaaaac-aattac 31129818  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  31129819 attttagttgaaaatg 31129834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 15060141 - 15060255
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||| |||||||| ||||||||||  ||||| ||||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15060141 gggcactttgttcataataatgtgtctcactgatattaaaaatatcgatgatatttattatccaagaaattgagataattttcataacaaaacaaattct 15060240  T
Q  138 attttagttgaaaat 152  Q
    ||||||||| |||||    
T  15060241 attttagttaaaaat 15060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 26817336 - 26817445
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||| |||||||||||| | |||||||||| |||| | ||  ||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  26817336 ccctttgtttctaataatgtgcctaactaatattacaaatatcgatgatatttattatccaagaaattgggatatttttcataacaa--caaattctatt 26817433  T
Q  141 ttagttgaaaat 152  Q
    ||||||||||||    
T  26817434 ttagttgaaaat 26817445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 19107911 - 19108026
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| |||   ||||||||||||||| |||||||||||||||||| ||||||  ||  | |    
T  19107911 gggccctttgttcctgataatgttcctcactaatattaaaaatattggtgatatttattatccaaaaaattgggataattttcaaaacaaaaaaatatat 19108010  T
Q  138 attttagttgaaaatg 153  Q
    ||||||||||||||||    
T  19108011 attttagttgaaaatg 19108026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 33516755 - 33516638
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| ||||||||||||||| |||||| |    
T  33516755 gggccctttgttcataataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattat 33516656  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  33516655 attttagttgaaaatggg 33516638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 4065709 - 4065601
Alignment:
Q  45 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 144  Q
    |||||| ||||||| ||||||||||||  ||||||| |||   ||||||||||||||||||||||| | | | ||||||||||| |||||  ||||||||    
T  4065709 ttgttcataataatttgcttcactaattataaaaatattggtgatatttattatccaagaaattggaagactcttcataacaaaacaaatgatattttag 4065610  T
Q  145 ttgaaaatg 153  Q
    |||||||||    
T  4065609 ttgaaaatg 4065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 3229315 - 3229212
Alignment:
Q  48 ttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttg 147  Q
    ||||||||||||| || |||||| ||||||||| |||   ||||||||||||||||||||  ||||||||||||||||||| |||||| | |  ||||||    
T  3229315 ttcctaataatgtcct-cactaaaattaaaaatattggtgatatttattatccaagaaatgtggataattttcataacaaaacaaattatttcctagttg 3229217  T
Q  148 aaaat 152  Q
    |||||    
T  3229216 aaaat 3229212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 12269374 - 12269487
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||    |||||||||||| || ||||| ||| ||| |||| |||||| |||||| |    
T  12269374 gggccctttgttcctaataatgtgtcttactaatattaaaaatatt-ttgatatttattatctaaaaaattaggagaatcttcacaacaaaacaaattat 12269472  T
Q  138 attttagttgaaaat 152  Q
    ||||||||| |||||    
T  12269473 attttagttaaaaat 12269487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 26212978 - 26212906
Alignment:
Q  52 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataa 124  Q
    ||||||| ||| ||||||||||||||||| | ||  ||||||||||||||||||||  |||||||||||||||    
T  26212978 taataatatgcctcactaatattaaaaatatcgatgatatttattatccaagaaatcaggataattttcataa 26212906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 4090907 - 4090808
Alignment:
Q  52 taataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaa 151  Q
    ||||||||||  |||| |||  ||||||| ||||  |||||||||||||||||||||| || ||| ||||||||||| ||||   |||||||||||||||    
T  4090907 taataatgtgtctcacaaattataaaaatattgataatatttattatccaagaaattgcgagaatcttcataacaaaacaaacgatattttagttgaaaa 4090808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 22524751 - 22524791
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaa 128  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  22524751 atatttattatccaagaaattgggatgattttcataacaaa 22524791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 13758928 - 13758826
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||| ||||||||| |||| ||||||  |||||||||| ||||| | ||| |||||||| || ||| ||||||||||||    
T  13758928 aagaaattggtgatatttttttgggtcctttgttcataattatgtgccccactaatatttaaaatatcgacgatatttataattcaaaaaattgggataa 13758829  T
Q  116 ttt 118  Q
    |||    
T  13758828 ttt 13758826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 14677761 - 14677821
Alignment:
Q  95 ttatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggg 155  Q
    |||||||  ||||||| | ||| ||||||||||| |||||  |||||||||||||||||||    
T  14677761 ttatccagaaaattggaagaatcttcataacaaaacaaataatattttagttgaaaatggg 14677821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 8389450 - 8389281
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||  ||||||    
T  8389450 aagaaattggtgatatttttttgggccctttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataa 8389351  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtg 185  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  8389350 ttttcataacaaagcaaattctattttagttgaaaatagggtgctaaaatttcagtctacttcacatgtg 8389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 20394936 - 20394764
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||| ||| ||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  20394936 aagaaattggtgatatttttttgggcccttttttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattattcaagaaattgggataa 20394837  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||| ||||||||||||||||    
T  20394836 ttttcataacaaagcaaattctattttagttcaaaatgggctgctaaaatttcagtatacttcgcatgtgcta 20394764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 13754090 - 13754240
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |  || |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  13754090 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcaacgatatttattatccaagaaattgagataattttcattacaaagcaaattct 13754189  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  13754190 attttatttgataatggggtgctaaaatttcagtctacttcgcatgtgcta 13754240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 31072653 - 31072503
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||| ||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31072653 gggcactttgctcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattct 31072554  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||||||    
T  31072553 attttagttgaaaataaggtgttaaaatttcagtctacttcacatgtgcta 31072503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 35478106 - 35477956
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| |||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  35478106 gggccctttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattct 35478007  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||| |||| |||||||||  ||||||||||||||||||| ||||||||    
T  35478006 attttatttgataatggggtgctaaaatttcagtctacttcggatgtgcta 35477956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 18667343 - 18667493
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||| |||||||||||||     
T  18667343 gggccctttgttcttaataatgtgcttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcattacaaagcaaattca 18667442  T
Q  138 attttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    |||||  || | |||||||||  ||||||||||||||||||||||||||||    
T  18667443 atttttttttataatggggtgctaaaatttcagtctacttcgcatgtgcta 18667493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 4539819 - 4539986
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||    
T  4539819 aagaaattggtgatatttttttgggccctttgttcataataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataa 4539918  T
Q  116 ttttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttcagtctacttcgcatgtgcta 188  Q
    ||||||||||| |||||||||     ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  4539919 ttttcataacagagcaaattc-----tagttgaaaatagggtgctaaaatttcagtctacttcgcatgtgcta 4539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 21863581 - 21863690
Alignment:
Q  45 ttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 144  Q
    ||||||||||||||||||  |||||||||||||||| |||   ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  21863581 ttgttcctaataatgtgccccactaatattaaaaatattggtgatatttattattcaagaaattgagataattttcataacaaagcaaattatattttag 21863680  T
Q  145 ttgaaaatgg 154  Q
    ||||||||||    
T  21863681 ttgaaaatgg 21863690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 1623572 - 1623689
Alignment:
Q  70 atattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggggtgtgaaaatttca 169  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||  |||||||||    
T  1623572 atattaaaaatatcgacaatatttattatccaagaaattgggataattttcgtaacaaagcaaattcta-tttagttgaaaatagggtgctaaaatttca 1623670  T
Q  170 gtctacttcgcatgtgcta 188  Q
     | |||||| |||||||||    
T  1623671 ttatacttcacatgtgcta 1623689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 39039020 - 39038903
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||| ||||||| |||||| |    
T  39039020 gggccctttattcctcataatgtgcctcactaatattaaaaatattggtgatatttattgtccaagaaattgggataattttcgtaacaaaacaaattat 39038921  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||| ||||||||    
T  39038920 attttagttaaaaatggg 39038903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 24442052 - 24441941
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||||  ||||||||||||||| |||   ||||||||||||||| |||||||||||||||| |||||||| |||||| |||||    
T  24442052 cctttgttcctaataatgtgctcaactaatattaaaaatattggtgatatttattatccaataaattgggataattttaataacaaaacaaattatattt 24441953  T
Q  142 tagttgaaaatg 153  Q
    | ||||||||||    
T  24441952 ttgttgaaaatg 24441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 41822259 - 41822148
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||  ||||| |||| |    
T  41822259 cttttttcctaataatgtgcctcactaatattaaaaatattgatgatatttattatccaagaaatttggataattttcataacaaaataaattatattat 41822160  T
Q  143 agttgaaaatgg 154  Q
    |||| |||||||    
T  41822159 agttaaaaatgg 41822148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 29637017 - 29636904
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||| || |||||||||||  | ||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||| |||||| |||||| ||||    
T  29637017 ccctttatttctaataatgtgtctgactaatattaaaaatattgatgatatttattatccaataaattgggataattttcaaaacaaaacaaattatatt 29636918  T
Q  141 ttagttgaaaatgg 154  Q
    ||||||||||||||    
T  29636917 ttagttgaaaatgg 29636904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 40934025 - 40934140
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||| |||| |||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||| |||||| |     
T  40934025 ggccatttgctcctaataatgtgtctcactaatattaaaaatattgatcatatttattatccaagaaatttggataatttt-ataacaaaacaaattatg 40934123  T
Q  139 ttttagttgaaaatggg 155  Q
    |||||||||||| ||||    
T  40934124 ttttagttgaaattggg 40934140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 43179548 - 43179439
Alignment:
Q  43 ctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttt 142  Q
    |||||||||||||||||| | ||||||||||| |||||  ||   |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  43179548 ctttgttcctaataatgtacctcactaatattgaaaatactggtgatatttattatccaagaaattgggataatttt-ataacaaaacaaattatatttt 43179450  T
Q  143 agttgaaaatg 153  Q
    |||| ||||||    
T  43179449 agttaaaaatg 43179439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 48636668 - 48636785
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | |||||||||||||||       ||||||||||||||| ||||||||| |||||||||||| || |||||| |    
T  48636668 gggccctttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattat 48636767  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  48636768 attttagttgaaaatggg 48636785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 6189532 - 6189415
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |     ||||||||||||||  ||||||||| |||| || ||||||| |||||| |    
T  6189532 gggccctttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcttaacaaaacaaattat 6189433  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  6189432 attttagttgaaaatggg 6189415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 5770852 - 5770928
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggata 114  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||||||||    
T  5770852 gggccctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgggata 5770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 44733619 - 44733725
Alignment:
Q  46 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagt 145  Q
    |||| |||||||||||  ||||||||||| ||||| | ||  |||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  44733619 tgtttctaataatgtgtgtcactaatattgaaaatatcgatgatatttattatccaagaaat-gagataattttcataacaaaataaattctaatttagt 44733717  T
Q  146 tgaaaatg 153  Q
    ||||||||    
T  44733718 tgaaaatg 44733725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 48238426 - 48238542
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||||||  | ||||| ||||||||| |     ||||||||||||||  ||||||| | ||||||||||||||| |||||| |    
T  48238426 gggccctttgttcctaataatgtgtcttactaa-attaaaaatatatgtgatatttattatccagaaaattggaagaattttcataacaaaacaaattat 48238524  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  48238525 attttagttgaaaatggg 48238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 8604718 - 8604612
Alignment:
Q  46 tgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagt 145  Q
    ||||||||||||||||||||||||||||||| ||| |||  |||| ||||||||||| ||| ||||| | |||| ||||| ||  ||||| ||||||| |    
T  8604718 tgttcctaataatgtgcttcactaatattaataatattggtcataattattatccaataaactgggaaattttttataactaaataaattatattttatt 8604619  T
Q  146 tgaaaat 152  Q
    |||||||    
T  8604618 tgaaaat 8604612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 8069546 - 8069663
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||||||||||| |||  | | ||| ||||||||| |     ||||||||||||||  ||||||||| |||| |||||||||| |||||| |    
T  8069546 gggccctttgttcctaataacgtgtcttattaaaattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattat 8069645  T
Q  138 attttagttgaaaatggg 155  Q
    ||||||||||||||||||    
T  8069646 attttagttgaaaatggg 8069663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 8114024 - 8113930
Alignment:
Q  56 aatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||| |||| ||||||||||||| |||   ||||||||||||||| || ||||| |||||||||||||||  |||||| ||||||||||||||||    
T  8114024 aatgtgtttcattaatattaaaaatattggtgatatttattatccaataagttggggtaattttcataacaa--caaattatattttagttgaaaat 8113930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 9420482 - 9420545
Alignment:
Q  90 atttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||    
T  9420482 atttattatccaagaaattaggattattttcataacaaaataaattttattttagttgaaaatg 9420545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 47522485 - 47522415
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaatt 108  Q
    ||||| ||||||  ||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||    
T  47522485 gggccatttgtttttaataatgtgtctcactaatattaaatatgttggccatatttattatccaagaaatt 47522415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 28460345 - 28460255
Alignment:
Q  64 tcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatggg 155  Q
    |||||| |||||||||| |||   |||||||||||||||||| || ||||||||||  ||||||| |||||  |||||||||||||||||||    
T  28460345 tcactagtattaaaaatattggtgatatttattatccaagaagtttggataatttt-ttaacaaaacaaatgatattttagttgaaaatggg 28460255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 135632 - 135746
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    |||||| |||||||||| |||  | ||||||||||||||| ||    ||||||||||||||  ||||||||| ||| |||| ||| || |||||| ||||    
T  135632 ccctttattcctaataaggtgtcttactaatattaaaaatatttgtaatatttattatccagaaaattgggagaatcttcacaactaaacaaattatatt 135731  T
Q  141 ttagttgaaaatggg 155  Q
    ||| |||||||||||    
T  135732 ttaattgaaaatggg 135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 3124354 - 3124281
Alignment:
Q  70 atattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||||||| | ||  |||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  3124354 atattaaaaatatcgatgatatttattatccaggaaattgagatatttttcataacaaaacaaattttatttta 3124281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 35118348 - 35118263
Alignment:
Q  64 tcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||||| || |||  |||||||||||||||| |||||  || |||||| |||||||| |||||| ||||||||||||||||    
T  35118348 tcactaatattaaatatattggtcatatttattatccaataaatt--gagaatttt-ataacaaaacaaattatattttagttgaaaat 35118263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 36628434 - 36628547
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    |||||||||||| ||||| |||||  ||||||||  ||||||| |||   |||||||||||||||||||||| || |||  |||||| ||| ||||   |    
T  36628434 gggccctttgttactaatcatgtgtctcactaattataaaaatattggtaatatttattatccaagaaattgcgagaatcatcataaaaaaacaaacgat 36628533  T
Q  138 attttagttgaaaa 151  Q
    ||||||||||||||    
T  36628534 attttagttgaaaa 36628547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 45446166 - 45446083
Alignment:
Q  68 taatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    ||||||||||||| |||| |||||| || |||||||||||||  ||||| || |||| ||| |||||| ||||||||||||||||    
T  45446166 taatattaaaaatattgatcatatt-atcatccaagaaattgaaataatatttataagaaaacaaattatattttagttgaaaat 45446083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 10015857 - 10015747
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||| ||||||||||  ||||||||  ||||| | |||   |||||||||||| ||||||||| || ||| ||| ||||||| ||||   |||||    
T  10015857 cctttgttcttaataatgtgtctcactaattataaaa-tattggtaatatttattatctaagaaattgtgagaatcttcgtaacaaaacaaacgatattt 10015759  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  10015758 tagttgaaaatg 10015747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 23381092 - 23381161
Alignment:
Q  51 ctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttc 120  Q
    |||||||| ||  ||||||||||||||||| | |   |||||||| |||||| |||||||||||||||||    
T  23381092 ctaataatatgtctcactaatattaaaaatatcggtgatatttatcatccaaaaaattgggataattttc 23381161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 1289 - 1403
Alignment:
Q  39 ggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattcta 138  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||    ||||||||||||||| |||||| ||| |||||||||||||| |||||||||    
T  1289 ggccctttgttcctaataatgtgcctcactaatattaaaaatatttgtgatatttattatccaataaattgagattattttcataacaaaacaaattcta 1388  T
Q  139 ttttagttgaaaatg 153  Q
    |||||||||||||||    
T  1389 ttttagttgaaaatg 1403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 50881 - 51008
Alignment:
Q  16 aagaaattggtgatannnnnnngggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataa 115  Q
    |||||||||||||||       ||| |||||| |||||||||||| ||||| | ||||||||||| | ||| ||||||||||||||||||||||||||||    
T  50881 aagaaattggtgatatttttttgggtcctttgctcctaataatgtacttcattgatattaaaaatatcgacgatatttattatccaagaaattgggataa 50980  T
Q  116 ttttcataacaaagcaaattctatttta 143  Q
    ||||| ||||||||||||||||||||||    
T  50981 ttttcgtaacaaagcaaattctatttta 51008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 18724 - 18613
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||| ||||||||||||||||| |||   ||||||||||||||| |||||| ||| ||||| |||||||| |||||| |||||    
T  18724 cctttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaataaattgagattatttttataacaaaacaaattttattt 18625  T
Q  142 tagttgaaaatg 153  Q
    ||||||||||||    
T  18624 tagttgaaaatg 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 2555 - 2443
Alignment:
Q  41 ccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatt 140  Q
    ||||||||||||||||||||| |||||||||||||||||| ||    ||||||||||| ||| |||||| |||||||| ||||||||| |||||| ||||    
T  2555 ccctttgttcctaataatgtgtttcactaatattaaaaatattagtgatatttattattcaataaattgagataatttgcataacaaaacaaattatatt 2456  T
Q  141 ttagttgaaaatg 153  Q
    |||||||||||||    
T  2455 ttagttgaaaatg 2443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 25097 - 25207
Alignment:
Q  42 cctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattt 141  Q
    ||||||||||||||||||||  ||||||||||||||||| |||   |||||||||||||||||||||| |||||| ||||| ||||| ||||||  ||||    
T  25097 cctttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgagataatattcatgacaaaccaaattaaattt 25196  T
Q  142 tagttgaaaat 152  Q
    |||||||||||    
T  25197 tagttgaaaat 25207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 40797 - 40906
Alignment:
Q  44 tttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctatttta 143  Q
    ||||||||||||||||||| | ||||||||||||||| ||    ||||||||||||||||||||||  ||||||| ||||||||| |||||| |||||||    
T  40797 tttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattatatttta 40896  T
Q  144 gttgaaaatg 153  Q
    ||||||||||    
T  40897 gttgaaaatg 40906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 3432 - 3318
Alignment:
Q  38 gggccctttgttcctaataatgtgcttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattct 137  Q
    ||||||||||||||||||||| ||  | ||||||||||||||| |     |||||||||||| || ||||||||| ||||||||||||||| |||||| |    
T  3432 gggccctttgttcctaataatatgtcttactaatattaaaaatatatgtgatatttattatctaaaaaattgggagaattttcataacaaaacaaattat 3333  T
Q  138 attttagttgaaaat 152  Q
    |||||||||||||||    
T  3332 attttagttgaaaat 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 873 - 934
Alignment:
Q  92 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  873 ttattatcctagaaattgagattattttcataacaaaacaaattctattttagttgaaaatg 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 21544 - 21455
Alignment:
Q  64 tcactaatattaaaaatgttgaccatatttattatccaagaaa-ttgggataattttcataacaaagcaaattctattttagttgaaaat 152  Q
    |||||||||||||||||||||   |||||||| |||||| ||| ||||||||||| ||||||||||  |||||||||||||||| |||||    
T  21544 tcactaatattaaaaatgttggtgatatttatcatccaaaaaagttgggataattctcataacaaaataaattctattttagttaaaaat 21455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 98425 - 98364
Alignment:
Q  92 ttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaatg 153  Q
    ||||||| |||||||||| ||| |||||||||| |||  |||||||||||||||||||||||    
T  98425 ttattattcaagaaattgagattattttcataataaaataaattctattttagttgaaaatg 98364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 60606 - 60538
Alignment:
Q  88 atatttattatccaagaaattgggataattttcataacaaagcaa---attctattttagttgaaaatgg 154  Q
    |||||||||| ||||||| ||| |||||||||||||||||| |||   ||| ||||||||||||||||||    
T  60606 atatttattacccaagaa-ttgagataattttcataacaaaacaaattattatattttagttgaaaatgg 60538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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