View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0694_high_2 (Length: 350)
Name: NF0694_high_2
Description: NF0694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0694_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 46 - 335
Target Start/End: Original strand, 29946520 - 29946809
Alignment:
| Q |
46 |
atataacagtttcagcacgaagttaaagctcatgataataacatttcaaaagccacttgagttcaaaatatacatgtataacgataataaaacaacacag |
145 |
Q |
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| T |
29946520 |
atataacagtttcagcacgaagttaaagctcatgataataacatttcaaaagccacttgaattcaaaatatacatgtataacgataataatacaacacag |
29946619 |
T |
|
| Q |
146 |
tcataatgacttatcaattagagaagaaaagattctaacttttgcaacccattttccatgtgtgcatccagcgacgatattactctcggcaactgctcca |
245 |
Q |
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| T |
29946620 |
tcataatgacttatcaattagagaagaaaagattctaacttttgcaacccattttccatgtgtgcatccagagacgatattactctcggcaactgctcta |
29946719 |
T |
|
| Q |
246 |
aaacctgtacaacaaaaccgaaaccattacacacacttcaaacgtttgctcacactcaacaacaacattacatcaattcaattacctgct |
335 |
Q |
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| T |
29946720 |
aaacctgtacaacaaaaccaaaaccattacacacacttcaaacgtttgctcacactcaacaacaacatttcatcaattcaattacctgct |
29946809 |
T |
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