View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0695_low_10 (Length: 318)
Name: NF0695_low_10
Description: NF0695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0695_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 43107726 - 43107438
Alignment:
| Q |
1 |
tgtgatgtttgcaaaaagaacttccaatccaataaggctttacatggtcacatgagatctcatcctgaaagggaatggcggggtatgaaccctaataagg |
100 |
Q |
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| T |
43107726 |
tgtgatgtttgcaaaaagaacttccaatccaataaggctttacatggtcacatgagatctcatcctgaaagggaatggcggggtatgaaccctaataagg |
43107627 |
T |
|
| Q |
101 |
ataataatattgattatcatgattatgatcaagatcaatattttcttagtgcattcaattccaaggaattggttattgatgatgaatcaaaatcttggcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
43107626 |
ataataatattgattatcatgattatgatcaagatcaatattttcttagtgcattcaattccaaggaattggttattgatgaggaatcaaaatcttggcc |
43107527 |
T |
|
| Q |
201 |
acgaagattgtttaaaacctgtaaaagaggccgttcgagtggtgaagttgttattgctgctcaaatactcgtgtatatgtcaacagata |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43107526 |
acgaagattgtttaaaacctgtaaaagaggccgttcgagtggtgaagttgttattgctgctcaaatactcgtgtatatgtcaacagata |
43107438 |
T |
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