View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0695_low_13 (Length: 263)
Name: NF0695_low_13
Description: NF0695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0695_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 32 - 243
Target Start/End: Complemental strand, 14053105 - 14052894
Alignment:
| Q |
32 |
aagaatatggcacttactaatatagaagaatccacaaattatcaagatcttcccacaaattccttcttaagggatatgaaaagggttaattaaatgcttt |
131 |
Q |
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| T |
14053105 |
aagaaaatggcacttactaatgtagaagaatccacaatttatcaagatcttcccacaaattccttcttaagggatatgaaaatggttaattaaatgcttt |
14053006 |
T |
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| Q |
132 |
tagaggatagcctgcttttggcctccaacattaacacttagtgtatgtttgatataacatcggtattgttggtcgaatccaaatgtatgcattggcaaca |
231 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
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| T |
14053005 |
tagaggatagtctgcttttggcctccaacattaacacttagtgtatgtttgatataacatcgatattgttggtcgaatccaaatgtatacattggcaaca |
14052906 |
T |
|
| Q |
232 |
taagatgtatac |
243 |
Q |
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|||||||||||| |
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| T |
14052905 |
taagatgtatac |
14052894 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 32 - 243
Target Start/End: Complemental strand, 14363133 - 14362922
Alignment:
| Q |
32 |
aagaatatggcacttactaatatagaagaatccacaaattatcaagatcttcccacaaattccttcttaagggatatgaaaagggttaattaaatgcttt |
131 |
Q |
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||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
14363133 |
aagaaaatggcacttactaatgtagaagaatccacaatttatcaagatcttcccacaaattccttcttaagggatatgaaaatggttaattaaatgcttt |
14363034 |
T |
|
| Q |
132 |
tagaggatagcctgcttttggcctccaacattaacacttagtgtatgtttgatataacatcggtattgttggtcgaatccaaatgtatgcattggcaaca |
231 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
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| T |
14363033 |
tagaggatagtctgcttttggcctccaacattaacacttagtgtatgtttgatataacatcgatattgttggtcgaatccaaatgtatacattggcaaca |
14362934 |
T |
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| Q |
232 |
taagatgtatac |
243 |
Q |
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|||||||||||| |
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| T |
14362933 |
taagatgtatac |
14362922 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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