View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0696_low_25 (Length: 300)
Name: NF0696_low_25
Description: NF0696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0696_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 70 - 247
Target Start/End: Original strand, 31086102 - 31086279
Alignment:
| Q |
70 |
aatatatgctgcttagtgcttatgatgttaatcgttatcaaattatccttgtagtgtcagatcattctttgaatttatttaggtacctctattttcaatg |
169 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31086102 |
aatatatgctgcttagtgcttatgatgttaatcgttatcaaattatccttgtagtgtcagatcattctttgaatttatttaggtacctctattttcaatg |
31086201 |
T |
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| Q |
170 |
gttgtagtttggaagagttgagcttgttaaaaatatttttgatatatagcaagcttgtttaatgttttatggtatatt |
247 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31086202 |
gttgtagtttggaagagttcagcttgttaaaaatatttttgatatatagcaagcttgtttaatgttttatggtgtatt |
31086279 |
T |
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