View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0696_low_36 (Length: 251)
Name: NF0696_low_36
Description: NF0696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0696_low_36 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 39044909 - 39044672
Alignment:
| Q |
14 |
aaatcccaccgctctccaactcatccaatcggccatcaacctctcatcaaccaatctcgtaaccgcccaatccatggtgaaggctattctagattcttcc |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39044909 |
aaatcccaccgctctccaactcatccaatcggccatcaacctctcatctaccaatctcgtaaccgcccaatccatggtgaaggctattctagattcttcc |
39044810 |
T |
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| Q |
114 |
tccagtagccgtaaccgcaccgtcgccgccaccacctgtatcgaaatactaacgaattcacaaaaccgcatttctctctccgacgacgctttaaaacatg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
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| T |
39044809 |
tccagtagccgtaaccgcaccgtcgccgccaccacctgtatcgaaatactaacgaattcacaaaaccgcatttctctctccaacgacgctttaacacatg |
39044710 |
T |
|
| Q |
214 |
gaaaaattaaagacggtcgagcatggctgaccgccgcc |
251 |
Q |
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||||||||||||||| |||||||||||||||||||||| |
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| T |
39044709 |
gaaaaattaaagacgctcgagcatggctgaccgccgcc |
39044672 |
T |
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