View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0696_low_37 (Length: 251)
Name: NF0696_low_37
Description: NF0696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0696_low_37 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 39044907 - 39044672
Alignment:
| Q |
16 |
atcccaccgctctccaactcatccaatcggccatcaacctctcatcaaccaatctcgtaaccgcccaatccatggtgaaggctattctagattcttcctc |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39044907 |
atcccaccgctctccaactcatccaatcggccatcaacctctcatctaccaatctcgtaaccgcccaatccatggtgaaggctattctagattcttcctc |
39044808 |
T |
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| Q |
116 |
cagtagccgtaaccgcaccgtcgccgccaccacctgtatcgaaatactaacgaattcacaaaaccgcatttctctctccgacgacgctttaaaacatgga |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
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| T |
39044807 |
cagtagccgtaaccgcaccgtcgccgccaccacctgtatcgaaatactaacgaattcacaaaaccgcatttctctctccaacgacgctttaacacatgga |
39044708 |
T |
|
| Q |
216 |
aaaattaaagacggtcgagcatggctgaccgccgcc |
251 |
Q |
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||||||||||||| |||||||||||||||||||||| |
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| T |
39044707 |
aaaattaaagacgctcgagcatggctgaccgccgcc |
39044672 |
T |
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