View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0697_low_30 (Length: 247)

Name: NF0697_low_30
Description: NF0697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0697_low_30
NF0697_low_30
[»] chr4 (73 HSPs)
chr4 (13-247)||(37348992-37349226)
chr4 (13-198)||(19534324-19534509)
chr4 (24-247)||(6482016-6482251)
chr4 (7-231)||(1724307-1724542)
chr4 (7-247)||(26564694-26564945)
chr4 (7-246)||(48459343-48459594)
chr4 (19-246)||(47550335-47550574)
chr4 (13-247)||(31752324-31752570)
chr4 (13-198)||(37107280-37107465)
chr4 (7-194)||(39046815-39047002)
chr4 (7-113)||(29755456-29755562)
chr4 (19-245)||(6382255-6382494)
chr4 (24-247)||(7985106-7985337)
chr4 (7-247)||(44317396-44317649)
chr4 (19-198)||(5902655-5902835)
chr4 (19-195)||(32585362-32585540)
chr4 (19-247)||(31918539-31918780)
chr4 (19-247)||(7608844-7609084)
chr4 (7-247)||(21423723-21423975)
chr4 (45-198)||(47239426-47239580)
chr4 (13-198)||(12825502-12825687)
chr4 (23-120)||(9230163-9230262)
chr4 (24-196)||(39188395-39188565)
chr4 (19-198)||(43893102-43893282)
chr4 (28-247)||(11027955-11028187)
chr4 (13-198)||(11122910-11123096)
chr4 (24-139)||(425703-425818)
chr4 (59-198)||(55826664-55826805)
chr4 (23-187)||(28695194-28695358)
chr4 (7-245)||(42299653-42299900)
chr4 (7-137)||(42774623-42774754)
chr4 (7-176)||(13770518-13770687)
chr4 (13-198)||(32596225-32596410)
chr4 (151-245)||(12505523-12505618)
chr4 (25-118)||(39375160-39375253)
chr4 (50-167)||(13015323-13015446)
chr4 (127-246)||(15987244-15987374)
chr4 (151-227)||(24637199-24637275)
chr4 (25-107)||(15987372-15987455)
chr4 (108-207)||(53906337-53906436)
chr4 (152-225)||(568425-568497)
chr4 (192-247)||(10302143-10302198)
chr4 (192-245)||(1724252-1724305)
chr4 (24-233)||(4766329-4766529)
chr4 (195-245)||(7334180-7334230)
chr4 (195-245)||(19883039-19883089)
chr4 (192-245)||(14605908-14605961)
chr4 (192-245)||(25941197-25941250)
chr4 (192-245)||(43309542-43309595)
chr4 (192-244)||(11696877-11696929)
chr4 (151-198)||(29527819-29527866)
chr4 (192-245)||(19548920-19548973)
chr4 (192-245)||(30673020-30673073)
chr4 (200-245)||(41914979-41915024)
chr4 (192-245)||(45065308-45065361)
chr4 (192-245)||(47103797-47103850)
chr4 (151-195)||(21544586-21544630)
chr4 (192-227)||(11173032-11173067)
chr4 (151-198)||(30266371-30266418)
chr4 (151-198)||(30285770-30285817)
chr4 (192-227)||(31782672-31782707)
chr4 (192-247)||(43893287-43893341)
chr4 (153-246)||(21956796-21956900)
chr4 (18-120)||(24637046-24637147)
chr4 (153-183)||(25941147-25941177)
chr4 (192-246)||(37107470-37107523)
chr4 (193-247)||(39086217-39086271)
chr4 (151-185)||(47103745-47103779)
chr4 (192-245)||(12075614-12075667)
chr4 (153-194)||(42907895-42907936)
chr4 (153-185)||(14605979-14606011)
chr4 (133-185)||(33516126-33516178)
chr4 (192-236)||(37246904-37246948)
[»] chr7 (74 HSPs)
chr7 (7-247)||(5376947-5377198)
chr7 (7-232)||(18825867-18826103)
chr7 (7-246)||(12980238-12980489)
chr7 (19-247)||(37195989-37196218)
chr7 (7-234)||(27850319-27850556)
chr7 (19-227)||(3920412-3920631)
chr7 (19-247)||(7779881-7780121)
chr7 (7-198)||(16078875-16079066)
chr7 (19-247)||(16866042-16866282)
chr7 (13-247)||(37579130-37579374)
chr7 (19-247)||(38139772-38140013)
chr7 (59-247)||(44658447-44658629)
chr7 (7-239)||(2630562-2630805)
chr7 (13-198)||(30650498-30650684)
chr7 (19-198)||(18125268-18125448)
chr7 (28-227)||(26622834-26623044)
chr7 (19-247)||(45379979-45380220)
chr7 (19-184)||(46127237-46127399)
chr7 (7-247)||(17885326-17885578)
chr7 (7-247)||(44985898-44986130)
chr7 (45-247)||(17851753-17851965)
chr7 (19-247)||(35074342-35074583)
chr7 (19-247)||(21702532-21702772)
chr7 (7-247)||(37182136-37182387)
chr7 (93-247)||(38152835-38153000)
chr7 (19-247)||(45885745-45885985)
chr7 (13-198)||(24425249-24425433)
chr7 (19-198)||(44794068-44794247)
chr7 (28-246)||(25905510-25905740)
chr7 (84-236)||(3226937-3227100)
chr7 (13-176)||(23328477-23328641)
chr7 (13-247)||(39455995-39456239)
chr7 (19-198)||(25782947-25783126)
chr7 (24-198)||(25979957-25980132)
chr7 (35-198)||(26004514-26004675)
chr7 (24-233)||(41103531-41103755)
chr7 (24-195)||(44734400-44734572)
chr7 (13-198)||(39316862-39317048)
chr7 (7-235)||(41741442-41741681)
chr7 (13-110)||(5916194-5916291)
chr7 (58-166)||(24753087-24753196)
chr7 (108-247)||(10072429-10072579)
chr7 (7-247)||(43507294-43507558)
chr7 (60-198)||(16811644-16811782)
chr7 (19-198)||(45708905-45709082)
chr7 (7-84)||(26004675-26004752)
chr7 (192-245)||(42908023-42908076)
chr7 (192-245)||(22973446-22973499)
chr7 (192-245)||(27896457-27896510)
chr7 (133-237)||(3157071-3157186)
chr7 (7-84)||(3227698-3227775)
chr7 (196-245)||(8906571-8906620)
chr7 (192-237)||(18684032-18684077)
chr7 (151-198)||(32546198-32546245)
chr7 (192-247)||(44845115-44845170)
chr7 (203-245)||(43218352-43218394)
chr7 (192-245)||(27063196-27063249)
chr7 (192-245)||(29014934-29014987)
chr7 (192-245)||(30839116-30839169)
chr7 (192-245)||(31426066-31426119)
chr7 (13-93)||(3274800-3274876)
chr7 (192-231)||(10995830-10995869)
chr7 (192-247)||(16079071-16079126)
chr7 (192-247)||(24753222-24753276)
chr7 (192-247)||(30650689-30650744)
chr7 (19-78)||(38152775-38152834)
chr7 (192-247)||(39317053-39317108)
chr7 (193-227)||(23475263-23475297)
chr7 (192-245)||(2472041-2472094)
chr7 (192-245)||(3909255-3909308)
chr7 (192-245)||(27063392-27063445)
chr7 (192-233)||(29292762-29292803)
chr7 (192-237)||(33841136-33841181)
chr7 (192-236)||(10990852-10990896)
[»] chr3 (58 HSPs)
chr3 (7-247)||(20086865-20087105)
chr3 (7-247)||(4557285-4557536)
chr3 (12-247)||(54317006-54317252)
chr3 (13-247)||(6738385-6738620)
chr3 (7-246)||(19111592-19111841)
chr3 (7-198)||(53631761-53631952)
chr3 (19-239)||(42758243-42758474)
chr3 (7-247)||(4016024-4016275)
chr3 (27-247)||(48390797-48391028)
chr3 (7-246)||(34119515-34119763)
chr3 (13-247)||(22535821-22536067)
chr3 (19-246)||(44172494-44172733)
chr3 (19-246)||(44179194-44179433)
chr3 (45-246)||(44639168-44639381)
chr3 (7-247)||(23580684-23580935)
chr3 (7-247)||(34025810-34026062)
chr3 (59-247)||(39655253-39655453)
chr3 (19-247)||(52198022-52198263)
chr3 (19-247)||(49579932-49580172)
chr3 (7-242)||(29842164-29842410)
chr3 (7-187)||(31126846-31127026)
chr3 (19-196)||(39728539-39728717)
chr3 (19-247)||(44252615-44252855)
chr3 (19-247)||(44953415-44953655)
chr3 (19-246)||(52572477-52572716)
chr3 (7-186)||(44106844-44107024)
chr3 (28-186)||(17146202-17146361)
chr3 (19-247)||(7469758-7469998)
chr3 (60-247)||(29284245-29284444)
chr3 (24-175)||(30682695-30682846)
chr3 (28-172)||(10823759-10823904)
chr3 (59-236)||(23154056-23154243)
chr3 (25-180)||(830884-831039)
chr3 (7-247)||(34154274-34154522)
chr3 (19-163)||(41937077-41937221)
chr3 (7-198)||(43582434-43582625)
chr3 (19-198)||(49025549-49025728)
chr3 (19-117)||(48306657-48306756)
chr3 (153-198)||(23546982-23547027)
chr3 (126-246)||(48305622-48305753)
chr3 (192-245)||(2490358-2490411)
chr3 (192-245)||(10043264-10043317)
chr3 (192-245)||(42243440-42243493)
chr3 (127-235)||(30616273-30616392)
chr3 (59-129)||(23547081-23547152)
chr3 (20-113)||(14208271-14208363)
chr3 (195-247)||(23910232-23910284)
chr3 (97-141)||(23910341-23910385)
chr3 (22-90)||(55438828-55438896)
chr3 (154-185)||(30904868-30904899)
chr3 (192-239)||(43582630-43582677)
chr3 (192-227)||(49025733-49025768)
chr3 (196-245)||(3414519-3414568)
chr3 (192-245)||(35687473-35687526)
chr3 (151-179)||(2487796-2487824)
chr3 (192-240)||(10371266-10371314)
chr3 (201-245)||(27252626-27252670)
chr3 (192-236)||(55438768-55438812)
[»] chr6 (45 HSPs)
chr6 (19-247)||(10188060-10188293)
chr6 (13-198)||(24602896-24603081)
chr6 (13-247)||(12678074-12678318)
chr6 (7-173)||(14032413-14032579)
chr6 (7-247)||(5863363-5863615)
chr6 (19-247)||(10142498-10142738)
chr6 (19-247)||(2367194-2367434)
chr6 (28-240)||(24225575-24225799)
chr6 (19-247)||(32853712-32853952)
chr6 (7-227)||(14505943-14506174)
chr6 (45-247)||(27738666-27738880)
chr6 (13-198)||(11762308-11762493)
chr6 (28-247)||(27534561-27534792)
chr6 (13-247)||(12141247-12141493)
chr6 (7-198)||(7393927-7394118)
chr6 (19-247)||(3483903-3484143)
chr6 (24-247)||(30816131-30816366)
chr6 (13-117)||(14410954-14411058)
chr6 (24-240)||(12309452-12309673)
chr6 (24-117)||(14245121-14245214)
chr6 (84-198)||(32053022-32053136)
chr6 (24-247)||(14254832-14255065)
chr6 (108-247)||(32532498-32532648)
chr6 (154-236)||(28079687-28079780)
chr6 (151-247)||(15498325-15498432)
chr6 (151-198)||(14410895-14410942)
chr6 (133-245)||(256474-256597)
chr6 (192-247)||(30986306-30986361)
chr6 (7-84)||(32532420-32532497)
chr6 (192-239)||(20610970-20611017)
chr6 (192-237)||(9442483-9442528)
chr6 (192-245)||(9458911-9458964)
chr6 (192-245)||(13769125-13769178)
chr6 (192-241)||(20349117-20349166)
chr6 (205-245)||(30624481-30624521)
chr6 (192-247)||(31496487-31496542)
chr6 (192-247)||(31501873-31501928)
chr6 (203-245)||(17546884-17546926)
chr6 (205-247)||(29341322-29341364)
chr6 (198-239)||(5108919-5108960)
chr6 (192-225)||(8320797-8320830)
chr6 (192-245)||(9458716-9458769)
chr6 (195-236)||(18908949-18908990)
chr6 (24-73)||(32052930-32052979)
chr6 (133-198)||(32959844-32959908)
[»] chr5 (58 HSPs)
chr5 (30-247)||(6092510-6092728)
chr5 (10-247)||(6155901-6156148)
chr5 (7-195)||(12447238-12447426)
chr5 (7-247)||(4582975-4583227)
chr5 (7-247)||(29245932-29246184)
chr5 (13-169)||(3573087-3573243)
chr5 (7-186)||(38006522-38006701)
chr5 (7-247)||(3564719-3564960)
chr5 (19-247)||(40517674-40517914)
chr5 (24-177)||(27088414-27088566)
chr5 (7-247)||(17853274-17853524)
chr5 (19-247)||(4920694-4920934)
chr5 (24-198)||(35194030-35194204)
chr5 (13-198)||(2985010-2985195)
chr5 (13-195)||(1218619-1218800)
chr5 (7-186)||(35311679-35311858)
chr5 (19-189)||(22694951-22695122)
chr5 (19-247)||(42987460-42987700)
chr5 (19-246)||(5908670-5908909)
chr5 (7-246)||(2412708-2412958)
chr5 (7-189)||(30115340-30115522)
chr5 (19-247)||(30996465-30996704)
chr5 (7-198)||(28045511-28045703)
chr5 (13-246)||(12834556-12834802)
chr5 (7-198)||(13402045-13402235)
chr5 (13-186)||(8453426-8453598)
chr5 (127-247)||(10127058-10127182)
chr5 (63-246)||(12866533-12866729)
chr5 (24-247)||(18206891-18207126)
chr5 (24-198)||(15890080-15890254)
chr5 (19-247)||(20973477-20973706)
chr5 (7-186)||(27302788-27302965)
chr5 (24-114)||(42717756-42717847)
chr5 (151-245)||(43523760-43523854)
chr5 (7-139)||(33862284-33862415)
chr5 (151-245)||(18116500-18116594)
chr5 (24-247)||(6369569-6369803)
chr5 (75-246)||(33420329-33420494)
chr5 (192-245)||(24207737-24207790)
chr5 (143-247)||(38972915-38973030)
chr5 (154-245)||(28569004-28569106)
chr5 (151-245)||(39422352-39422452)
chr5 (192-247)||(33727982-33728037)
chr5 (192-245)||(23044974-23045027)
chr5 (126-210)||(7350436-7350520)
chr5 (193-245)||(40187640-40187692)
chr5 (192-247)||(15890259-15890314)
chr5 (148-198)||(6810156-6810206)
chr5 (203-245)||(12915537-12915579)
chr5 (90-196)||(15564576-15564682)
chr5 (197-239)||(32574927-32574969)
chr5 (200-245)||(2681277-2681322)
chr5 (196-245)||(16311276-16311325)
chr5 (59-120)||(20634067-20634128)
chr5 (59-120)||(20650181-20650242)
chr5 (192-241)||(27900388-27900437)
chr5 (59-120)||(34259147-34259208)
chr5 (194-230)||(35584171-35584207)
[»] chr1 (60 HSPs)
chr1 (19-239)||(34673270-34673501)
chr1 (13-236)||(29871276-29871510)
chr1 (13-247)||(9982870-9983115)
chr1 (7-246)||(45866166-45866417)
chr1 (7-245)||(12494868-12495117)
chr1 (7-227)||(49741014-49741238)
chr1 (19-247)||(36187200-36187440)
chr1 (28-247)||(24236741-24236972)
chr1 (7-247)||(44615455-44615707)
chr1 (7-247)||(44792862-44793114)
chr1 (24-247)||(17134821-17135056)
chr1 (50-247)||(2514668-2514867)
chr1 (13-246)||(19572493-19572737)
chr1 (13-198)||(16433207-16433386)
chr1 (19-198)||(29936285-29936465)
chr1 (7-194)||(40087507-40087695)
chr1 (19-194)||(42439714-42439890)
chr1 (7-247)||(18354060-18354312)
chr1 (19-198)||(28297802-28297983)
chr1 (7-195)||(23966729-23966919)
chr1 (13-159)||(35936896-35937042)
chr1 (90-247)||(13390354-13390506)
chr1 (19-246)||(51421727-51421966)
chr1 (7-246)||(5180902-5181147)
chr1 (27-247)||(16408823-16409051)
chr1 (7-194)||(17092003-17092191)
chr1 (7-240)||(50426648-50426887)
chr1 (7-160)||(42707908-42708062)
chr1 (19-247)||(49250753-49250993)
chr1 (19-247)||(34610942-34611182)
chr1 (7-198)||(3628025-3628219)
chr1 (90-247)||(23490751-23490919)
chr1 (24-120)||(44632254-44632350)
chr1 (7-137)||(34060121-34060251)
chr1 (19-166)||(24710727-24710875)
chr1 (7-166)||(39616160-39616320)
chr1 (192-247)||(33293511-33293566)
chr1 (24-109)||(13020562-13020648)
chr1 (192-246)||(23968633-23968687)
chr1 (19-165)||(20774501-20774649)
chr1 (192-239)||(13798292-13798339)
chr1 (151-245)||(23058468-23058573)
chr1 (196-244)||(13020651-13020699)
chr1 (192-247)||(24710901-24710956)
chr1 (192-247)||(39616346-39616401)
chr1 (192-246)||(42707818-42707872)
chr1 (192-245)||(10778549-10778602)
chr1 (192-237)||(19003656-19003701)
chr1 (201-246)||(35936810-35936855)
chr1 (56-113)||(38733898-38733955)
chr1 (151-195)||(16903525-16903569)
chr1 (191-245)||(16237286-16237340)
chr1 (192-226)||(39219312-39219346)
chr1 (13-50)||(2514512-2514549)
chr1 (196-245)||(34085293-34085342)
chr1 (192-245)||(35069871-35069924)
chr1 (153-198)||(48125723-48125768)
chr1 (149-185)||(19892978-19893014)
chr1 (59-119)||(36616796-36616856)
chr1 (205-245)||(48312686-48312726)
[»] chr8 (56 HSPs)
chr8 (19-247)||(27932281-27932521)
chr8 (19-247)||(20399460-20399700)
chr8 (13-198)||(24870064-24870249)
chr8 (7-247)||(1012474-1012726)
chr8 (7-227)||(17469112-17469343)
chr8 (13-247)||(29108802-29109048)
chr8 (7-198)||(45235921-45236113)
chr8 (19-247)||(32302928-32303169)
chr8 (7-247)||(34139304-34139554)
chr8 (15-198)||(43113666-43113849)
chr8 (24-239)||(1063380-1063607)
chr8 (13-196)||(36131959-36132141)
chr8 (7-189)||(24568796-24568977)
chr8 (28-247)||(24927826-24928057)
chr8 (30-188)||(34776945-34777104)
chr8 (31-196)||(14186205-14186366)
chr8 (24-122)||(35215378-35215476)
chr8 (13-246)||(17220579-17220819)
chr8 (7-247)||(39445556-39445799)
chr8 (19-165)||(2075907-2076054)
chr8 (19-166)||(4230791-4230939)
chr8 (7-188)||(11255058-11255236)
chr8 (60-167)||(28977185-28977293)
chr8 (108-247)||(40248351-40248501)
chr8 (13-113)||(34021341-34021441)
chr8 (192-247)||(5858632-5858687)
chr8 (30-113)||(29089589-29089672)
chr8 (192-245)||(14687452-14687505)
chr8 (7-84)||(40248502-40248579)
chr8 (192-247)||(6388496-6388551)
chr8 (192-239)||(14155585-14155632)
chr8 (192-247)||(37960942-37960997)
chr8 (156-198)||(2075864-2075906)
chr8 (197-246)||(4230711-4230760)
chr8 (192-245)||(15068570-15068623)
chr8 (192-247)||(2075814-2075869)
chr8 (192-227)||(9642351-9642386)
chr8 (192-247)||(27777178-27777233)
chr8 (192-245)||(15173862-15173915)
chr8 (146-198)||(17084147-17084199)
chr8 (153-185)||(30481474-30481506)
chr8 (131-178)||(9476073-9476120)
chr8 (200-247)||(30481401-30481448)
chr8 (192-247)||(35215589-35215643)
chr8 (194-245)||(43113608-43113659)
chr8 (192-247)||(45236118-45236173)
chr8 (133-234)||(8545342-8545454)
chr8 (201-239)||(27056543-27056581)
chr8 (192-245)||(2183588-2183641)
chr8 (59-120)||(4594276-4594337)
chr8 (192-245)||(28345544-28345597)
chr8 (151-188)||(37961012-37961049)
chr8 (131-195)||(5700337-5700401)
chr8 (153-181)||(27777255-27777283)
chr8 (153-185)||(28345494-28345526)
chr8 (197-245)||(29918665-29918713)
[»] scaffold0036 (1 HSPs)
scaffold0036 (24-240)||(33267-33494)
[»] chr2 (52 HSPs)
chr2 (19-240)||(13705348-13705581)
chr2 (7-198)||(31942226-31942417)
chr2 (19-198)||(8915977-8916157)
chr2 (19-233)||(37999352-37999578)
chr2 (13-198)||(6027929-6028115)
chr2 (7-247)||(7314628-7314880)
chr2 (19-247)||(24414112-24414352)
chr2 (13-195)||(14540649-14540827)
chr2 (19-247)||(10920514-10920747)
chr2 (19-246)||(13830605-13830843)
chr2 (13-247)||(19104817-19105066)
chr2 (24-247)||(45256697-45256932)
chr2 (19-247)||(30846814-30847055)
chr2 (7-247)||(37106556-37106801)
chr2 (7-247)||(10208410-10208662)
chr2 (7-198)||(12193867-12194059)
chr2 (19-247)||(9632255-9632495)
chr2 (19-198)||(42798028-42798209)
chr2 (19-198)||(45115427-45115607)
chr2 (28-196)||(36128148-36128318)
chr2 (7-117)||(16226848-16226958)
chr2 (7-247)||(44746089-44746341)
chr2 (7-113)||(37472854-37472961)
chr2 (28-247)||(18106099-18106301)
chr2 (151-245)||(35248367-35248472)
chr2 (20-70)||(37319812-37319862)
chr2 (192-247)||(12341654-12341709)
chr2 (192-247)||(37472739-37472794)
chr2 (151-245)||(38342501-38342606)
chr2 (192-233)||(15546798-15546839)
chr2 (192-233)||(22900848-22900889)
chr2 (195-247)||(10212463-10212515)
chr2 (151-198)||(14331529-14331576)
chr2 (127-178)||(22900772-22900823)
chr2 (59-122)||(30978812-30978875)
chr2 (192-227)||(35965388-35965423)
chr2 (192-247)||(36128086-36128141)
chr2 (195-245)||(13954802-13954852)
chr2 (195-245)||(14096009-14096059)
chr2 (152-198)||(18485651-18485697)
chr2 (197-227)||(35409167-35409197)
chr2 (192-247)||(45115612-45115669)
chr2 (200-241)||(24051610-24051651)
chr2 (192-245)||(30978979-30979032)
chr2 (200-245)||(31942167-31942212)
chr2 (59-120)||(38342659-38342720)
chr2 (192-245)||(43371607-43371660)
chr2 (191-235)||(4427977-4428021)
chr2 (133-185)||(30696908-30696960)
chr2 (197-237)||(35510433-35510473)
chr2 (217-245)||(42576667-42576695)
chr2 (151-198)||(44057884-44057932)
[»] scaffold0294 (1 HSPs)
scaffold0294 (13-235)||(14638-14871)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-185)||(197380-197546)
[»] scaffold0022 (1 HSPs)
scaffold0022 (13-233)||(90460-90691)
[»] scaffold0135 (1 HSPs)
scaffold0135 (23-120)||(36029-36128)
[»] scaffold0027 (1 HSPs)
scaffold0027 (24-170)||(6280-6426)
[»] scaffold0189 (1 HSPs)
scaffold0189 (7-167)||(4113-4275)
[»] scaffold0097 (1 HSPs)
scaffold0097 (7-187)||(33440-33624)
[»] scaffold0157 (1 HSPs)
scaffold0157 (151-245)||(14859-14954)
[»] scaffold0519 (1 HSPs)
scaffold0519 (7-188)||(10157-10335)
[»] scaffold0014 (2 HSPs)
scaffold0014 (7-93)||(14290-14376)
scaffold0014 (192-247)||(14164-14218)
[»] scaffold0184 (1 HSPs)
scaffold0184 (192-245)||(3022-3075)
[»] scaffold0005 (1 HSPs)
scaffold0005 (192-245)||(211417-211470)
[»] scaffold0013 (2 HSPs)
scaffold0013 (151-198)||(128161-128208)
scaffold0013 (151-198)||(105509-105556)
[»] scaffold0002 (1 HSPs)
scaffold0002 (205-245)||(449768-449808)
[»] scaffold0902 (1 HSPs)
scaffold0902 (26-101)||(761-836)
[»] scaffold0008 (2 HSPs)
scaffold0008 (195-245)||(67805-67855)
scaffold0008 (195-245)||(75648-75698)
[»] scaffold0009 (1 HSPs)
scaffold0009 (192-245)||(107373-107426)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 37348992 - 37349226
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||| |||||||||||||||| |||||||| || ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||    
T  37348992 aatatgctcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagtttttataacgcgagaattatcaaacaaaataaca 37349091  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggg 212  Q
    || ||||| ||| |||||||||||||| | || | || |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  37349092 tggcatatcaacataaaataattttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccattacccgtgttttgaaatcggg 37349191  T
Q  213 gaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| ||||| |||||||||||||| |||||||    
T  37349192 gaaaactcaaactcatacccaaacccagtcaaaac 37349226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 19534324 - 19534509
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  19534324 aatatgctcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagtttttataacacgacaattatcaaacaaaataaca 19534423  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||| |||||||||||||||| || |||| ||||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  19534424 tgacatatcaacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgt 19534509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 6482251 - 6482016
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||    
T  6482251 tttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagtttttataacacgacaattatcaaacaaaataacatggcatatcaa 6482152  T
Q  124 cctaaaata-attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcgg 211  Q
      |||| ||  |||| | | |||| || ||||||||||||||||||||||||||||| |||||||||||           |||||||||||| |||| ||    
T  6482151 tataaattagtttttttgcatttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattgg 6482052  T
Q  212 ggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||    
T  6482051 ggaaaacccaaacccatacccaaacccaatcaaaac 6482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 1724542 - 1724307
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||||||||  |||||||| ||||||    
T  1724542 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatctaacaaa 1724443  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg--------- 197  Q
    |||||||||||||| ||| |||| || |||||| | || | || |||||||||||||||||||||||||||||||||||| || |||||||             
T  1724442 ataacatgacatatcaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacc 1724343  T
Q  198 --tgttttgaaatcggggaaaacccaaacccatacc 231  Q
      ||||||||||||||||||||||||||||||||||    
T  1724342 catgttttgaaatcggggaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 26564694 - 26564945
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||| |||||||||||||||||  | | ||||||||||||| |||| ||||||||||| || ||||||||||||    
T  26564694 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagtttttataacacggcagttatcaaacaaa 26564793  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt-------- 198  Q
     ||||||||||||| ||| |||| || |||||| | |||| || |||||||||||||| |||||||||||||||||||||||| ||||||||            
T  26564794 ctaacatgacatatcaacataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacc 26564893  T
Q  199 ---gttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
       |||||||||||||||||| | ||||| |||||||||||||| |||||||    
T  26564894 cgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaaac 26564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 48459343 - 48459594
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||||| ||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  48459343 tccaacaatatgctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 48459442  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-------- 197  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||  |||||||            
T  48459443 aataacataacatatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatac 48459542  T
Q  198 ---tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
       |||||||||||||||||||||||| | |||||| |||| ||||||||||    
T  48459543 ccatgttttgaaatcggggaaaacccatatccatactcaaatccaatcaaaa 48459594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 47550574 - 47550335
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  47550574 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 47550475  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||           ||  ||||||||||||||     
T  47550474 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgag 47550375  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||| || ||| ||||||||||||| ||||||    
T  47550374 atcggggaaaactcatacctatacccaaacccagtcaaaa 47550335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 31752324 - 31752570
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| ||||||||||| ||||| || ||||||||||  |  ||||||||||| || |||| ||||| |||| ||||||||||||||||||||||    
T  31752324 aatatgctcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgttagtttttattaacatgacaattatcaaacaaaataac 31752423  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgt 200  Q
    ||||||||| ||| |||| ||||||| ||| |||| || |||| ||||||||||||||||||||| |||||||||| | |           |||||||||    
T  31752424 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgt 31752523  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  31752524 tttgaaatcggggaaaacccatacccatatccaaacccaatcaaaac 31752570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 37107280 - 37107465
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||    
T  37107280 aatatgctcattttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttataacatggcaattatcaaacaaaataaca 37107379  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||| |||| ||||||||| | || | |||   ||| |||||   |||||||||||||||||||||||| ||||||||    
T  37107380 tgacatatcaacataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgttacccgt 37107465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 39046815 - 39047002
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| | ||||||||||||| |||||| |||| ||||| ||||||||||||||||    
T  39046815 tccaacaatatgctcattttaacatttgttagacggaatgatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaa 39046914  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac 194  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| || |||| |||||||||||| || |||||||||||||||||| ||||    
T  39046915 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggagtgggtacctatatacccgttac 39047002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 29755562 - 29755456
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  29755562 tccaacaatatactcattttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgtttataacacggtaattatcaaacaaa 29755463  T
Q  107 ataacat 113  Q
    |||||||    
T  29755462 ataacat 29755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 245
Target Start/End: Complemental strand, 6382494 - 6382255
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  6382494 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 6382395  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    ||| ||| ||||||| |||| | || |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||    
T  6382394 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 6382295  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
     ||||| ||||||||| ||||||||||||||||| |||||    
T  6382294 gatcggagaaaacccatacccatacccaaacccagtcaaa 6382255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 7985337 - 7985106
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttt-ataacacgacaattatcaaacaaaataacatgacatataa 122  Q
    |||||||||||||||||| |||||||||||| ||  |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||| |    
T  7985337 tttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacgacaattatcaaacaaaataacatgacttatca 7985238  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtaccta-----tatac--cctttacccgtgttttgaaatcggggaa 215  Q
    || ||||||| |||||| | || | || ||||||||||||||||||||| || |||| ||     ||| |  ||  ||||| |||||||||||||| |||    
T  7985237 acataaaatacttttctgcattcgggacgggtttgggtatgggttcgggatgagtacatacatgttatccgtcccatacccatgttttgaaatcggagaa 7985138  T
Q  216 aacccaaacccatacccaaacccaatcaaaac 247  Q
    || ||||||  |||||||||||||||||||||    
T  7985137 aatccaaacttatacccaaacccaatcaaaac 7985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 44317396 - 44317649
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||| ||||| ||| |||||||||||||  | | ||||||||  | |||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  44317396 tccaacaataaactcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaa 44317495  T
Q  106 aataacatgacatataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------ta 193  Q
    |||||||| |||||| ||| |||| || |||| | || |||| || ||||||||||||||||||||||||||||||||||||||| |           ||    
T  44317496 aataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccata 44317595  T
Q  194 cccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  44317596 cccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaac 44317649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 5902835 - 5902655
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||| || |||    
T  5902835 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataagataaca 5902736  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| || |||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5902735 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 5902655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 32585362 - 32585540
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggt-agtgtttat-aacacgacaattatcaaacaaaataacatgac 116  Q
    |||| ||||||| ||||||||| || ||||||||||  | ||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||| |||    
T  32585362 ctcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattatcaaacaaaataacaagac 32585461  T
Q  117 atataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    |||||||| |||| ||| ||| ||| |||| || |||||||||||||||||| |||||||||||||||||||| |||||    
T  32585462 atataaacataaagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacc 32585540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 31918780 - 31918539
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  31918780 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 31918681  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    ||| ||| |||| || |||| | || |||| || |||||||||||||||||||||||||||| |||||||||| |           ||||||||||| ||    
T  31918680 tatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcga 31918581  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||||| || |||||||||||||| |||||||    
T  31918580 gatcggggaaaacccatactcatacccaaacccagtcaaaac 31918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 7608844 - 7609084
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||  ||| ||||| |||| |||||||||||||||||||||||| |||    
T  7608844 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgacaattatcaaacaaaataacataaca 7608943  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| || | || |||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||| ||     
T  7608944 tatcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 7609043  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||| ||| |||||||    
T  7609044 atcggggaaaacccatacccatacccaaatccagtcaaaac 7609084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 21423723 - 21423975
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||| | ||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  21423723 tccaacaataaattcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 21423822  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||| || |||||| ||| |||| || |||| ||| |||| || ||||||| ||||||||| ||||||||||||||||||||| |           |||    
T  21423823 aataatataacatatcaacataaagtagttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatac 21423922  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||| || || |||||||||||| ||||||||||||||||| |||||||    
T  21423923 ccgtgtttcgagattggggaaaacccatacccatacccaaacccagtcaaaac 21423975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 47239580 - 47239426
Alignment:
Q  45 tgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgt 143  Q
    ||||||||||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |    
T  47239580 tgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 47239481  T
Q  144 ttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||  ||| ||||||||||||| ||||||| |||||||||||| ||||||||    
T  47239480 ttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgt 47239426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 12825687 - 12825502
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||| |||| ||||||| |||||||||||| || ||||||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  12825687 aatatcctcactttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagtttttataacacgataattatcaaacaaaataaca 12825588  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| |||| ||| |||| ||||||||| |  | | ||  ||||||||||| ||||| |||||||||| |||||| || ||||||||    
T  12825587 tgatatatcaacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgt 12825502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 9230163 - 9230262
Alignment:
Q  23 ttttaacatttgttagaccgattgatttagttactt--ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  9230163 ttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaataacatgacatat 9230262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 39188395 - 39188565
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||    
T  39188395 tttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt-taacacgacagttatcaaacaaaataacatgacatatcaa 39188493  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc 196  Q
    | ||||| |||||| | | || | |||| ||||||  ||||||| ||||| |||||||||||| || ||||||    
T  39188494 cataaaacaattttatgcattcgggatgagtttggacatgggtttggggt-ggtacctatatatccgttaccc 39188565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 43893102 - 43893282
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  43893102 ctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 43893201  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| || |||| ||| |||| || |||||||||||||  |||||||||| ||||||||||||| ||||||||    
T  43893202 tatcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgt 43893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 11027955 - 11028187
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | ||||||||||  | |||||||||| ||| ||||| ||||| |||| |||||||||||||||||||||||| |||||| ||  |    
T  11027955 acatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgacaattatcaaacaaaataacataacatatcaatat 11028054  T
Q  127 aaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcgggga 214  Q
    ||| ||||||| | || |||| ||  |||||||||||| ||||||||||||||||||||||||| |           |||||||||||||| ||||||||    
T  11028055 aaagtaatttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcgggga 11028154  T
Q  215 aaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| ||||||||||||| ||| |||||||    
T  11028155 aaacccatacccatacccaaatccagtcaaaac 11028187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 11123096 - 11122910
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    |||| ||||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||| | ||||| |||| ||||||||| ||||||||||||    
T  11123096 aataaactcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgacaattataaaacaaaataac 11122997  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |  |||||| ||| |||| || |||| ||| |||| || ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  11122996 aaaacatatcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgt 11122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 425703 - 425818
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    ||||| |||||||||||||||||||||||||  |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||    
T  425703 tttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagtttttataacatgacaattatcaaacaaaataacatggcatatcaa 425802  T
Q  124 cctaaaataattttct 139  Q
    | |||| |||||||||    
T  425803 cataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 55826805 - 55826664
Alignment:
Q  59 ctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttct-acgtttgtgatgggttt 156  Q
    |||||||||||||||||||| ||||| |||  |||||||||||||||||||||||| |||||| ||| |||| || |||| | || |||| || ||||||    
T  55826805 ctttaaatatcaatggtagtttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggttt 55826706  T
Q  157 gggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || |||||||||||||||||||||||||||||| ||||||||    
T  55826705 ggatatgggttcggggtgggtacctatatacccgttacccgt 55826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 28695358 - 28695194
Alignment:
Q  23 ttttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||| ||||| |||||||||| || |||||||||| |||| |||| ||||||||  ||||||||||||| ||||||||||  ||||| |    
T  28695358 ttttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttataacgtgacaattatcaaataaaataacattgcatatca 28695259  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac 187  Q
    || ||||  ||||| |||  |||| || | ||||||||||| |||||||||| ||||||||||||    
T  28695258 acataaagcaatttcctatatttgagacgagtttgggtatgagttcggggtgagtacctatatac 28695194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 42299653 - 42299900
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||  |  |||||||||| ||  ||||||||||||  ||||| ||||| |||| ||||||||||||||||    
T  42299653 tccaacaatatgttcactttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagtttttattaacaagacaattatcaaacaa 42299752  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac---------cc 196  Q
    ||||||||| ||||| ||| |||| || |||| ||  |||| || | ||||| |||||||||| |||||||||||||||||||| ||||         ||    
T  42299753 aataacatggcatatcaacataaagtactttt-tatatttgggacgtgtttgagtatgggttcagggtgggtacctatatacccgttacccgtccatacc 42299851  T
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||| ||| ||||||||| |||| || |||||    
T  42299852 gtgttttgaaatcggggaaaatccatacccatacctaaactcagtcaaa 42299900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 42774623 - 42774754
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||||||||||||||||||||  || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  42774623 tccaacaatatgttcattttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42774722  T
Q  106 aataacatgacatataaacctaaaataatttt 137  Q
    ||||||||||||||| ||| |||| |||||||    
T  42774723 aataacatgacatatcaacataaagtaatttt 42774754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 13770687 - 13770518
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||| ||||||||||||||||| || ||| |||||| |||||| || |||||||||||  ||||||||||||||    
T  13770687 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgtttttataacacggtaattatcaaacaaa 13770588  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtggg 176  Q
    |||||||| | ||| ||| ||||||| |||| | | || | || ||||||| ||||| ||||||||||||    
T  13770587 ataacatggcttattaacataaaatagttttatgcattcgggacgggtttgagtatgagttcggggtggg 13770518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 32596410 - 32596225
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||| |||||||||||  | ||||||||||  | ||| |||||| |||| |||| ||||||||| |||||||||||||| |||| |||    
T  32596410 aatatgctcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagtttttataacatgacaattatcaaaccaaatgaca 32596311  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||  |||| ||| |||||||||||||||| || | ||   ||||||||||| ||| | |||||| |||||||||||| ||||||||    
T  32596310 tggtatatcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgt 32596225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 12505618 - 12505523
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccataccc-aaacccaatcaaa 245  Q
    ||||||||||||| |||| ||||||||||  |||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  12505618 gggtttgggtatgagttcagggtgggtactaatatccccattacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaa 12505523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 39375160 - 39375253
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||| ||  |||| ||||||||  | |||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  39375160 ttaacatttgttcgattgatttatttagttgttcctttaaatattagtggtagtttttataacacggcaattatcaaacaaaataacatgacat 39375253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 13015446 - 13015323
Alignment:
Q  50 tagttacttctttaaatatcaatggtagtgtttataacacgacaat------tatcaaacaaaataacatgacatataaacctaaaataattttctacgt 143  Q
    ||||| || |||||||||||||||||||| ||||||||| || |||      ||||||||||||||||||||||||| ||| |||||||||||| ||| |    
T  13015446 tagttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 13015347  T
Q  144 ttgtgatgggtttgggtatgggtt 167  Q
    | | || ||||||| |||||||||    
T  13015346 tcgagacgggtttgagtatgggtt 13015323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 15987374 - 15987244
Alignment:
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaa 215  Q
    ||||||||||| ||  |||| || |||||||||||||||||||||||||||| |||||||||| |           |||||||||||| ||||| |||||    
T  15987374 aaaataattttttatatttgggacgggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaa 15987275  T
Q  216 aacccaaacccatacccaaacccaatcaaaa 246  Q
    ||| || ||||||||||||||||||||||||    
T  15987274 aactcatacccatacccaaacccaatcaaaa 15987244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 24637199 - 24637275
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    |||||||||||||||| | ||||||| || ||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  24637199 gggtttgggtatgggtcctgggtgggcacatatatccccgttacccgtattttgaaatcggggaaaacccaaaccca 24637275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 15987455 - 15987372
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaa 107  Q
    |||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  15987455 ttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 53906436 - 53906337
Alignment:
Q  108 taacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaa 207  Q
    ||||||||||||| ||| | || ||||||| ||| |||| || | |||| | |||||||||||||||||||||||||||||  |||||||||||||||||    
T  53906436 taacatgacatatcaacatgaagtaattttttacatttgggacgagtttagatatgggttcggggtgggtacctatatacctgttacccgtgttttgaaa 53906337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 568425 - 568497
Alignment:
Q  152 ggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacc 225  Q
    |||||||||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||| ||||||||||||    
T  568425 ggtttgggtatgggttcggggtgggtacatatatccccattaccc-tattttgaaatcgggaaaaacccaaacc 568497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 10302143 - 10302198
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  10302143 tacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaaaac 10302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 1724305 - 1724252
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1724305 tacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaa 1724252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 4766529 - 4766329
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta--taacacgacaattatcaaacaaaataacatgacatata 121  Q
    ||||||||||||||||   | ||||||||||  | ||||||||||||||| |||| |||   ||||| ||||||||||||| |||||||||| ||||||     
T  4766529 tttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattatcaaataaaataacataacatatc 4766430  T
Q  122 aacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaaccca 221  Q
    ||| |||| || ||    || |||| || |||| || || |||||       ||||||||||||| |  |||||||||||||||| |||||||||||| |    
T  4766429 aacataaagtattt----acatttgggacgggtatgagtttgggt-------gggtacctatatatctgttacccgtgttttgaattcggggaaaaccta 4766341  T
Q  222 aacccataccca 233  Q
     |||||||||||    
T  4766340 tacccataccca 4766329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 7334230 - 7334180
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  7334230 ccgtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaa 7334180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 19883089 - 19883039
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  19883089 ccgtgttttaaaatcggggaaaacccaaactcatactcaaacccaatcaaa 19883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 14605961 - 14605908
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  14605961 tacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25941197 - 25941250
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||    
T  25941197 tacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaatcaaa 25941250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 43309542 - 43309595
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||    
T  43309542 tacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaa 43309595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 11696877 - 11696929
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaa 244  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  11696877 taccggtgttttgaaatcggagaaaacctaaacccatacccaaacccagtcaa 11696929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 29527819 - 29527866
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  29527819 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgt 29527866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 19548973 - 19548920
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| ||||||||||||||||||||||||  | ||||||||||||||| |||||    
T  19548973 tacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaa 19548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 30673020 - 30673073
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||| ||||||| ||||| |||||| ||||||||||||||||||||    
T  30673020 tacccgtattttaaaatcggagaaaatccaaactcatacccaaacccaatcaaa 30673073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 41915024 - 41914979
Alignment:
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||    
T  41915024 ttttgaaatcggggaaaacccaaactcatacccgaacccagtcaaa 41914979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 45065308 - 45065361
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  45065308 tacccgtattttgaaatcgaggaaaacctaaacctatacccaaacccagtcaaa 45065361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 47103797 - 47103850
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||||| |||||    
T  47103797 tacccgtattttgaaattggggaaaacccaaacccatacaaaaacccagtcaaa 47103850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 21544586 - 21544630
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||    
T  21544586 gggtttgggtatgggttcggggtgggtacatatatccccattacc 21544630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 11173032 - 11173067
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    ||||||| ||||||||||||||||||||||||||||    
T  11173032 tacccgtattttgaaatcggggaaaacccaaaccca 11173067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 30266418 - 30266371
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||| ||| ||||| ||| ||||||||    
T  30266418 gggtttgggtatgggttcggggtggatacatatatccccgttacccgt 30266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 30285770 - 30285817
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||| ||| ||||| ||| ||||||||    
T  30285770 gggtttgggtatgggttcggggtggatacatatatccccgttacccgt 30285817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 31782672 - 31782707
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    ||||||| ||||||||||||||||||||||||||||    
T  31782672 tacccgtattttgaaatcggggaaaacccaaaccca 31782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 43893287 - 43893341
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||| || |||||||||| |||| ||||||||||||||||| |||||||    
T  43893287 tacccgtgtttcgagatcggggaaa-cccatacccatacccaaacccagtcaaaac 43893341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 21956900 - 21956796
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaat 241  Q
    |||||||||||||||||||||||| |||||||| ||| |           |||||||||||| |||||||  ||||||||||| |||||||||| |||||    
T  21956900 gtttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccgtgttttaaaatcggaaaaaacccaaactcatacccaaatccaat 21956801  T
Q  242 caaaa 246  Q
     ||||    
T  21956800 taaaa 21956796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 24637046 - 24637147
Alignment:
Q  18 actcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgaca 117  Q
    ||||||||||||||||  |  ||||| | ||| |||| ||||||||| ||||||||  |||  ||||| || |||||||||||||| |||||||||| ||    
T  24637046 actcattttaacatttcctt-accgaataattcagttgcttctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatggca 24637144  T
Q  118 tat 120  Q
    |||    
T  24637145 tat 24637147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 25941147 - 25941177
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctat 183  Q
    |||||||||||||||||||||||||||||||    
T  25941147 gtttgggtatgggttcggggtgggtacctat 25941177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 37107470 - 37107523
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||||| ||| ||||||||||| ||||| |||||||| ||||||    
T  37107470 tacccgtgttttgaaattggg-aaaacccaaactcatacacaaacccagtcaaaa 37107523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 39086217 - 39086271
Alignment:
Q  193 acccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||| |||| ||||||||| |||||| ||||| |||| |||||||||||||||||    
T  39086217 acccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaac 39086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 47103745 - 47103779
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatat 185  Q
    ||||||||||||||||||||||||||||| |||||    
T  47103745 gggtttgggtatgggttcggggtgggtacatatat 47103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 12075667 - 12075614
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||||||||| ||||||    
T  12075667 tacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaa 12075614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 42907895 - 42907936
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatataccctttac 194  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||    
T  42907895 gtttgggtatgggctcggggtgggtacctatatccccattac 42907936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 14606011 - 14605979
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatat 185  Q
    ||||||||||||||||||||||||||| |||||    
T  14606011 gtttgggtatgggttcggggtgggtacatatat 14605979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 33516178 - 33516126
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatat 185  Q
    ||||| ||| |||| || |||||||||||| |||||||||||||||| |||||    
T  33516178 attttttacatttgagacgggtttgggtataggttcggggtgggtacttatat 33516126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 37246904 - 37246948
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |||||||||||| |||||| |||||| |||||| |||||||||||    
T  37246904 tacccgtgttttaaaatcgaggaaaatccaaacacatacccaaac 37246948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 5376947 - 5377198
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  5376947 tccaacaatatgctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagtttttataacacgacaattatcaaacaaa 5377046  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc---------- 196  Q
    || |||||| |||| ||| |||| ||||||||| | || | ||  | |||||||||||||||||||||||||||||||||||||||||||              
T  5377047 attacatgatatatcaacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacc 5377146  T
Q  197 -gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     |||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  5377147 tgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatcaaaac 5377198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 18826103 - 18825867
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||  |  |||| |||||||||||||| |||||||||||||||||||||||||||    
T  18826103 tccaataatatgctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagtttttataacacgacaattatcaaacaaa 18826004  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||| ||||| ||| ||||||||||||||   |||| |||||||||||||| ||||||||||||||||||||||||||| |           ||||    
T  18826003 ataacatggcatatcaacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacc 18825904  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccataccc 232  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18825903 cgtgttttgaaatcggggaaaacccaaacccacaccc 18825867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 12980238 - 12980489
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  12980238 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacgaaaattatcaaacaaa 12980337  T
Q  107 ataacatgacatataaacctaaaata-attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||| ||||| ||| |||||||  |||| | | |||| || ||||||||||||||||||||||||||||| ||||||||| |           |||    
T  12980338 ataacatggcatatcaacataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatac 12980437  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12980438 ccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtcaaaa 12980489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 37196218 - 37195989
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||||||||||||||||| || ||||||||||  |  |||| |||||||||||||| ||||| |||| |||| ||||||||||||||||||| |||    
T  37196218 ctcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgacagttatcaaacaaaataacataaca 37196119  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaa 217  Q
    ||| ||| |||| ||||||| ||| ||| ||| |||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  37196118 tatcaacataaagtaattttttacatttatgacgggtttgggtatggattcggggtgggtagctatatacccattacctgtgttttgaaatcggggaaaa 37196019  T
Q  218 cccaaacccatacccaaacccaatcaaaac 247  Q
     ||| ||||||||||||||| |||||||||    
T  37196018 tccatacccatacccaaacctaatcaaaac 37195989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 27850556 - 27850319
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| ||||||| ||||||||||||| |||||||||||||| || |||||||||||||||  ||| |||||||||||||||||||||||||||    
T  27850556 tccaacaatatgctcattt-aacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttataacacgacaattatcaaacaaa 27850458  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||||||||| | | |||| ||||||||||| || | || ||||||||||||||||||||| |||||||||||| |||| |           ||||    
T  27850457 ataacatgacatatcatcgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacc 27850358  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaa 234  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  27850357 cgtgttttgaaatcggggaaaacccatacccaaacccaa 27850319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 3920412 - 3920631
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    ||||||||||||||||||||||||||| ||||||||  | |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||    
T  3920412 ctcattttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagtttttataacatggcaattatcaaacaaaataacatggcat 3920511  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt-----------gttttgaaa 207  Q
    || ||| |||||||||||||||| || | ||  | |||||||||||||||||||||||||||||||||||  ||| ||||           |||||||||    
T  3920512 atcaacataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaa 3920611  T
Q  208 tcggggaaaacccaaaccca 227  Q
    ||||||||||||||||||||    
T  3920612 tcggggaaaacccaaaccca 3920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 7779881 - 7780121
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  7779881 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 7779980  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||| ||| ||| |||| || |||||||||||| |||||||||||||||||||||||||| |           ||||||||||||||     
T  7779981 tatcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgag 7780080  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  7780081 atcggggaaaacccatacccatacccaaacccagtcaaaac 7780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 16078875 - 16079066
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||| |||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  16078875 tccaacaatatgttcactttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagtttttataacacgacaattatcaaacaaa 16078974  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||||| ||| |||| |||||||||   ||  ||| | |||||||||| |||| |||||||| |||||||||||| ||||||||    
T  16078975 ataacatggcatatcaacgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgt 16079066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 16866042 - 16866282
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  |||||||||||||| |||| ||||| |||| | |||||||||||||||||||||| |||    
T  16866042 ctcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataaca 16866141  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||     
T  16866142 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgag 16866241  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  16866242 atcggggaaaacccatacccataaccaaacccagtcaaaac 16866282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 37579130 - 37579374
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||  ||||||||||||| ||  |||||||||||||| || | ||||||||| |||||||||||||||||||||||    
T  37579130 aatatgctcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttataacatgacaattatcaaacaaaataaca 37579229  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac----------ccgtgttt 202  Q
    || ||||  ||| |||| ||||||||| | |||| ||  | ||||||||| |||||||||||||||||||||||||| ||||          ||||||||    
T  37579230 tggcatagcaacataaagtaattttctgcatttgagacagctttgggtataggttcggggtgggtacctatatacccgttacccttacccatccgtgttt 37579329  T
Q  203 tgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||| |||| ||||||||||||||||||| | |||||||    
T  37579330 cgaaatcgggaaaaatccaaacccatacccaaacctagtcaaaac 37579374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 38140013 - 38139772
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||||||||||||||||| || ||||||||||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||    
T  38140013 ctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgaca 38139914  T
Q  118 tataaacctaaaataa-ttttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttga 205  Q
    ||| ||  |||||||| |||| ||| |||| || |||||||| |||||||||||||||||||| ||||||| | |||||           ||||||||||    
T  38139913 tatcaatataaaataatttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttga 38139814  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||| |||||||||||| ||||||| ||||||||| |||||||    
T  38139813 aattggggaaaacccatacccatatccaaacccagtcaaaac 38139772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 59 - 247
Target Start/End: Complemental strand, 44658629 - 44658447
Alignment:
Q  59 ctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttg 157  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||| |||| ||| ||||  | |||||||    
T  44658629 ctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaatatttttttacatttggtacgggtttg 44658530  T
Q  158 ggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| | |||||||||||       |||||||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  44658529 ggtatgggttcgggataggtacctatat-------acccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaac 44658447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 239
Target Start/End: Complemental strand, 2630805 - 2630562
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  2630805 tccaacaatatgttcactttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagtttttataatacggcaattatcaaacaaa 2630706  T
Q  107 ataacatgacatataaacctaaaata-attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||| ||||| ||| |||| ||  |||| | | || | || |||||||||||||||||||||||||||| |||||||||| |           |||    
T  2630705 ataacatggcatatcaacataaagtagtttttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatac 2630606  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    || |||||| |||||||||||||||||||||||||||||||||||    
T  2630605 ccatgtttt-aaatcggggaaaacccaaacccatacccaaaccca 2630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 30650498 - 30650684
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    |||| ||||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| | ||||||||||||||||||||    
T  30650498 aataaactcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataac 30650597  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || |||||| ||| |||| ||||||| ||| |||| || || |||||||||||||||||||||||||||||||||||| ||||||||    
T  30650598 ataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 30650684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 18125448 - 18125268
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  |||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  18125448 ctcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 18125349  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| || |||| ||| |||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18125348 tatcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgt 18125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 26622834 - 26623044
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaaccta 127  Q
    ||||||||| |||| ||||||||| || || |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||| ||    
T  26622834 acatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacata 26622933  T
Q  128 aaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttgaaatcggggaaa 216  Q
    |||||||||| | | || |  | | ||||||||||||||||||||||||||| ||||||||| |||||           |||||||||||||| ||||||    
T  26622934 aaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaa 26623033  T
Q  217 acccaaaccca 227  Q
    |||||||||||    
T  26623034 acccaaaccca 26623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 45379979 - 45380220
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  45379979 ctcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 45380078  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    | | ||| |||| ||||||| | || |||| || | |||| |||||||||||||||||||||||||||||||| |           ||||||| ||||||    
T  45380079 tgtcaacataaagtaatttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttga 45380178  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| |||||||| ||||||| ||||||||| |||||||    
T  45380179 aatcgggaaaaacccatacccatatccaaacccagtcaaaac 45380220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 46127399 - 46127237
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||| |||||||||||||||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  46127399 ctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttattataacacgacaatgatcaaacaaaataacatgacat 46127300  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctata 184  Q
    ||   | |||||||||||||| | |||| || ||||||| ||||| | |||| |||||||||||||    
T  46127299 at---cataaaataattttctgcatttgggacgggtttgagtatgagatcggtgtgggtacctata 46127237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 17885326 - 17885578
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttata-acacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||| ||||  || ||||||||||  | |||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  17885326 tccaacaatatgttcactttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatcaaacaa 17885425  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-------- 197  Q
    ||||||||||||||| ||| |||| ||||||| ||| |||| || |||| |||||||||||||||||| || |||||||||||| |||||||            
T  17885426 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatac 17885525  T
Q  198 ---tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
       |||||| ||||||||||||||||| |||||||  |||||||| |||||||    
T  17885526 ccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaac 17885578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 44986130 - 44985898
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  44986130 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44986031  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttga 205  Q
    |||||||| |||||| ||| | |||||||||| ||| |||| ||       ||||||| |||||| |||||||  ||||||||| ||||||||| |||||    
T  44986030 aataacat-acatatcaacat-aaataattttttacatttggga------cgggtatgagttcggagtgggtatttatatacccgttacccgtg-tttga 44985940  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  44985939 aatcggagaaaacccatatccatacccaaacccaatcaaaac 44985898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 247
Target Start/End: Original strand, 17851753 - 17851965
Alignment:
Q  45 tgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgt 143  Q
    ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||| || |||| ||| |    
T  17851753 tgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacat 17851852  T
Q  144 ttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt---------gttttgaaatcggggaaaacccaaacccatacccaa 234  Q
    ||| |||||||||||||||||||||||| |||||||||||||| || ||||||||         || || | ||||||||||||||| ||||||||||||    
T  17851853 ttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgttaagatcggggaaaacccatacccatacccaa 17851952  T
Q  235 acccaatcaaaac 247  Q
    ||||| |||||||    
T  17851953 acccagtcaaaac 17851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 35074342 - 35074583
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  35074342 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 35074441  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    ||| ||| |||| || |||| | || |||| || ||||||||||||||||||||| ||||||||||||||||| |           |||||||||||| |    
T  35074442 tatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaa 35074541  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||||| ||||||||||||||||| |||||||    
T  35074542 gatcggggaaaacccatacccatacccaaacccagtcaaaac 35074583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 21702532 - 21702772
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  21702532 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 21702631  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||| |||| || ||||| ||||||||||||||||||||||||||||||||| |           ||||||||||| ||     
T  21702632 tatcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 21702731  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| || |||||||||||||| |||||||    
T  21702732 atcggggaaaacccatactcatacccaaacccagtcaaaac 21702772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 37182136 - 37182387
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| |||||||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  37182136 tccaacaatatgttcactttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37182235  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttac 194  Q
    ||||||||||||||| ||| ||| |||||||| ||| |||| || |||| ||||||||||||| || || ||||||||||||           ||  |||    
T  37182236 aataacatgacatatcaacataagataattttttacatttgggacgggtatgggtatgggttc-ggatgagtacctatatacccgctacccgtcccatac 37182334  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| |||| ||||||||| || |||||||||||||| |||||||    
T  37182335 ccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaac 37182387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 247
Target Start/End: Original strand, 38152835 - 38153000
Alignment:
Q  93 aattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt- 191  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| || |||||| ||||||||||||||||||||||||||||| || |     
T  38152835 aattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgtt 38152934  T
Q  192 ----------tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
              ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  38152935 atccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 38153000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 45885985 - 45885745
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||| ||||  | ||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||| |||    
T  45885985 ctcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataaca 45885886  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || || ||| ||||||||||||||||||||||||||||||           ||  ||||||||||||||     
T  45885885 tatcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgag 45885786  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  45885785 atcggggaaaactcatacccatacccaaacccagtcaaaac 45885745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 24425249 - 24425433
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||||| |||||||| ||  | |||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  24425249 aatatgctcactttaacatttgttagaccggttgatttatttg-tcctttaaatatcaatggtagtttttataacacgataattatcaaacagaataaca 24425347  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || ||||| ||| || | ||||||| | | ||||  | ||||||||  ||||| || |||||||||||||||||||| ||||||||    
T  24425348 tggcatatcaacatatagtaattttatgcatttggaacgggtttggaaatggggtcagggtgggtacctatatacccgttacccgt 24425433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 44794247 - 44794068
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  ||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||    
T  44794247 ctcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaattatcaaacaaaataacataaca 44794148  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||| ||||| | ||||||||    
T  44794147 tatcaacataaaataattttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgttacccgt 44794068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 25905510 - 25905740
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  25905510 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 25905609  T
Q  127 aaaataattttctacgtttgtgatg-ggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgttttgaaatcgggga 214  Q
    ||||||||||| ||| |||| || |  ||||||||||| ||||||||| ||||||||| ||||| ||||||           ||||||||| || |||||    
T  25905610 aaaataattttttacatttgggacgatgtttgggtatgagttcggggt-ggtacctatgtacccgttacccgtcccatacctgtgttttgagattgggga 25905708  T
Q  215 aaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||| ||||||||||||||||| ||||||    
T  25905709 aaacccatacccatacccaaacccagtcaaaa 25905740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 3227100 - 3226937
Alignment:
Q  84 taacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctat 183  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| |||| || || |||||||||||||||||||||||||    
T  3227100 taacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtgggtacctat 3227001  T
Q  184 a-------taccctt----tacccgtgttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |       ||||| |    |||||||||||||||||||||||||||||| |||||||| |||||    
T  3227000 attcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaac 3226937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 23328477 - 23328641
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||| ||||| ||||||||||||||||||||| | ||||||||||||||| || | |||||| ||||||||||||||||||||||||||    
T  23328477 aatatgctcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataatttttatagcacgacaattatcaaacaaaataaca 23328576  T
Q  113 tgacatataaacct-aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtggg 176  Q
     ||||| | ||| | ||||||||||||| | || | || |||||||||||| || ||||||||||    
T  23328577 agacatgtcaacataaaaataattttctccattcgggacgggtttgggtataggatcggggtggg 23328641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 39456239 - 39455995
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataac-acgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  | ||||||| ||  | |||  ||||||||||||| | ||||| || | | ||||||||||||||||||||    
T  39456239 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattaccatggcaattatcaaacaaaataac 39456140  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-----------tgt 200  Q
    ||||||||| ||| |||| ||||||| ||| |||| || |||| || |||| |||||||||||||||||||||||||| |||||||           |||    
T  39456139 atgacatatcaacataaagtaatttt-tacatttgggacgggtatgagtat-ggttcggggtgggtacctatatacccgttacccgtcccatacccatgt 39456042  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  39456041 tttgaaatcggggaaaacccatatccatacccaaacccagtcaaaac 39455995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 25783126 - 25782947
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||| ||||| |||| ||| |||||||||||||||| || ||||||||||  ||| |||| ||||||||||  ||||||||||||||||||| |||| ||    
T  25783126 ctcactttaatatttattataccgattgatttagttgctcctttaaatattgatgatagtttttataacactgcaattatcaaacaaaataatatgagat 25783027  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || ||| |||| ||||||||| | || | || || ||| |||||| ||||||||||||||||||||||||| ||| ||||    
T  25783026 attaacataaagtaattttctgcattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgt 25782947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 25980132 - 25979957
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||||| || ||||||| ||| | |||||||||||||||  ||| ||||| |||| || |||||||||||||||||||||||||| | |    
T  25980132 tttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaaaataacatgacatttca 25980033  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || |||||||||||| ||| ||||  | || |||||||||| ||| ||||||||||| |||||| || ||||||||    
T  25980032 acataaaataattttttacatttggaaaggatttgggtatgagtttggggtgggtacatatatatccgttacccgt 25979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 198
Target Start/End: Complemental strand, 26004675 - 26004514
Alignment:
Q  35 ttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaacctaaaataat 134  Q
    |||||||||||||||||||  || ||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||| ||||| ||| |||| ||||    
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatagtttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagtaat 26004576  T
Q  135 tttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||| | || | |  | |||  ||||||||||||||||||||| |||||||||  ||||||||    
T  26004575 tttctgcattcggggcgagtt--ggtatgggttcggggtgggtatctatatacctgttacccgt 26004514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 41103531 - 41103755
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatca---atggtagtgtttat-aacacgacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||||||| || ||||||||||  | ||||||||||||   |||||| | | ||| |||| ||||||||||||||||||||||| || |||    
T  41103531 tttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaaaataacaagagata 41103630  T
Q  120 taaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaat 208  Q
    | ||| |||||||||||| ||| |||  || ||||||  ||||||||||||||||||||| ||||||||| |           |||||||||||||||||    
T  41103631 tcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaat 41103730  T
Q  209 cggggaaaacccaaacccataccca 233  Q
    ||||||||||||| ||||| |||||    
T  41103731 cggggaaaacccatacccacaccca 41103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 195
Target Start/End: Complemental strand, 44734572 - 44734400
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||| |||||||||||  | ||||||| ||  | ||| ||||||||||| |||| ||||| |||| ||||||||||||| ||||||||||||||||| |    
T  44734572 tttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtttttattaacatgacaattatcaaataaaataacatgacatatca 44734473  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    || |||| ||||||| ||| |||| || || | || ||||||||||||||||||||||||||||||| |||||    
T  44734472 acataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattacc 44734400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 39316862 - 39317048
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  | ||||||| |   | ||| |||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  39316862 aatatgctcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 39316961  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||| ||| |||||||||||| ||| |||| || || | |||||||| |||| || ||| ||| |||||||||  |||||||    
T  39316962 atgacatatcaacataaaataattttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgt 39317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 235
Target Start/End: Complemental strand, 41741681 - 41741442
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||||||||||||  | ||||||| ||  | | |||||||||||||||||| ||||| |||| || |||||||||||||    
T  41741681 tccaacaatatgctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgataattatcaaacaa 41741582  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||||||||||||| |   |||| ||||||| ||| |||| || |||| ||  ||||||||| ||||||||||||| |||||| |           |||    
T  41741581 aataacatgacatatcagtataaagtaattttttacatttgggacgggtatgaatatgggttc-gggtgggtacctacatacccgttatccgtctcatac 41741483  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaa 235  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  41741482 ccgtgttttgaaatcggggaaaacccatactcatacccaaa 41741442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 5916291 - 5916194
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataa 110  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||| || |||||||  |||||||||||||||||||    
T  5916291 aatatactcagtttaacatttgttagaccgattgattgatttactcctttaaatatcaatggtagttttgataacacagcaattatcaaacaaaataa 5916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 24753087 - 24753196
Alignment:
Q  58 tctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggttt 156  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||||||||||| ||| |||| || ||||||    
T  24753087 tctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggttt 24753186  T
Q  157 gggtatgggt 166  Q
    ||||||||||    
T  24753187 gggtatgggt 24753196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 10072429 - 10072579
Alignment:
Q  108 taacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------taccc 196  Q
    ||||||||||||| ||| |||| ||||||| ||| |||| || || | |||||||||||||||||||||||||||||||||| |           |||||    
T  10072429 taacatgacatatcaacataaagtaattttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccataccc 10072528  T
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  10072529 gtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 10072579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 43507294 - 43507558
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||| ||||||||||| || ||||||||||  |  ||||||||||||||||||| ||||| || | ||||||||||||||||    
T  43507294 tccaacaatatgctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatgacaattatcaaacaa 43507393  T
Q  106 ------------aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacccttta 193  Q
                ||||||||||||||| ||| |||||||||||| ||| |||| || | || | ||||||||||| |||||||| ||||||||||| |||    
T  43507394 aataacatacaaaataacatgacatatcaacataaaataattttttacatttgggacgagtataggtatgggttcagggtgggtgcctatatacccgtta 43507493  T
Q  194 cccg-----------tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||           |||||||||||||||||||||||| ||  ||||||||||||| |||||||    
T  43507494 cccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaac 43507558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 198
Target Start/End: Original strand, 16811644 - 16811782
Alignment:
Q  60 tttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgg 158  Q
    ||||||||||||||||||| ||||| |||| | |||||||||||||||||||||| | |||| ||| |||| ||||||| ||| |||| || || |||||    
T  16811644 tttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaattttttacatttgggacggctttgg 16811743  T
Q  159 gtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||||| ||||||||| |||||||||| ||| ||||    
T  16811744 gtatgggttc-gggtgggtatctatatacccattatccgt 16811782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 45709082 - 45708905
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||| | |||| ||| | ||||||||||||||||||||| || |||    
T  45709082 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtaatttttattaatatgacaattatcaaacaaaataatataaca 45708983  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| ||   || ||| |||  || |||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  45708982 tatcaacataaagta---ttttacattttggacgggtttaggtatgagttcggggtgggtacctatatacccgttacccgt 45708905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 26004752 - 26004675
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat 84  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |||||    
T  26004752 tccaacaatatgctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttat 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 42908076 - 42908023
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  42908076 tacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 22973446 - 22973499
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  22973446 tacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 27896510 - 27896457
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  27896510 tacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaa 27896457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 3157071 - 3157186
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaaccca 221  Q
    |||||||| ||||| || |||||||||||| ||||||| |||||||||||||| ||| |           ||||| | |||||||||||||||||||| |    
T  3157071 attttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaaccta 3157170  T
Q  222 aacccatacccaaacc 237  Q
    ||||||||||||||||    
T  3157171 aacccatacccaaacc 3157186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 3227775 - 3227698
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat 84  Q
    ||||| ||||| |||| || |||||||||||||| || ||||||||||  | |||||||||||||||||||| |||||    
T  3227775 tccaacaatatgctcacttcaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttat 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 8906620 - 8906571
Alignment:
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  8906620 cgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaa 8906571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 18684032 - 18684077
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacc 237  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  18684032 tacccgtattttgaaatcggggaaaacccgaacccatacccaaacc 18684077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 32546198 - 32546245
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  32546198 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgt 32546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 44845170 - 44845115
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| || ||||||||||||||||||||||||||||| |||| || |||||||    
T  44845170 tacccgtattatgaaatcggggaaaacccaaacccataccaaaactcagtcaaaac 44845115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 43218352 - 43218394
Alignment:
Q  203 tgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  43218352 tgaaattggggaaaacccaaacccatacccaaacccagtcaaa 43218394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 27063196 - 27063249
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||| ||||||| ||||| |||||||||||||| |||||    
T  27063196 tacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtcaaa 27063249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 29014987 - 29014934
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  29014987 tacccgtattttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaa 29014934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 30839169 - 30839116
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||||||||| |||||||| ||||| |||||||||||||| |||||    
T  30839169 tacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 31426066 - 31426119
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||    
T  31426066 tacccgtatttttaaatcggggaaaacccaaaccaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 3274876 - 3274800
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgaca 93  Q
    ||||||||||||||||||||||||||||| | | |||||||| ||| |    ||||||| |||||| ||||||||| ||||    
T  3274876 aatatactcattttaacatttgttagaccaaataatttagttgcttgt----atatcaaaggtagtttttataacatgaca 3274800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 10995869 - 10995830
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacc 231  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  10995869 tacccgtgtcttgaaatcggggaaaacccaaactcatacc 10995830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 16079071 - 16079126
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| ||||| ||||||||||||  |||||||||| || |||||||    
T  16079071 tacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtcaaaac 16079126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 24753222 - 24753276
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| |||||| |||||||| ||||||| ||||||||| |||||||    
T  24753222 tacccgtgttttgagatcggg-aaaacccatacccatatccaaacccagtcaaaac 24753276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 30650689 - 30650744
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| || ||||||||| || ||||||||| ||||||| |||||||    
T  30650689 tacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaac 30650744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 38152775 - 38152834
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagt 78  Q
    |||| ||||||||||||||||| || ||||||||||  | ||||| ||||||||||||||    
T  38152775 ctcactttaacatttgttagacggaatgatttagttgatcctttagatatcaatggtagt 38152834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 39317053 - 39317108
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||| ||||||| || || |||| ||||||||| |||||||    
T  39317053 tacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaac 39317108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 23475297 - 23475263
Alignment:
Q  193 acccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    |||||||||||||||||||| ||||||||||||||    
T  23475297 acccgtgttttgaaatcgggaaaaacccaaaccca 23475263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 2472041 - 2472094
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| || |||||||||  ||||| ||||| ||||||||||||||||||||    
T  2472041 tacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaa 2472094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 3909308 - 3909255
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||| |||||  |||||||||||||| |||| |||||| ||||||||    
T  3909308 tacccgtgtttcgaaattagggaaaacccaaactcatatccaaactcaatcaaa 3909255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 27063392 - 27063445
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| || | ||||||||||||||| | ||||||||||||||||| |||||    
T  27063392 tacccgtattattaaatcggggaaaaccgagacccatacccaaacccagtcaaa 27063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 29292762 - 29292803
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccataccca 233  Q
    |||||||||||||||||||||||||| ||| ||||| |||||    
T  29292762 tacccgtgttttgaaatcggggaaaatccatacccaaaccca 29292803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 33841136 - 33841181
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacc 237  Q
    ||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  33841136 tacccgtgttttgaaatcggggaaaactcaaattcatactcaaacc 33841181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 10990896 - 10990852
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    ||||||| |||||||||||||||||| || ||||||||| |||||    
T  10990896 tacccgtattttgaaatcggggaaaaacccaacccatactcaaac 10990852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 20086865 - 20087105
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| | || ||||||||||||||||  || ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||| |||    
T  20086865 tccaacaatatgcccactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaagcaa 20086964  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttga 205  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || |||| || ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20086965 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgagta-gggttcggggtgggtacctatatacccattacccgtgttttga 20087063  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||| ||||||| ||||||||| |||||||    
T  20087064 aatcggggaaaacccatacccatatccaaacccagtcaaaac 20087105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 4557536 - 4557285
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  4557536 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 4557437  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg--------- 197  Q
    |||||||||||||| ||| |||| ||||||||| | || | ||| | |||||||||||||||||||||||||||||||||| | |||||||             
T  4557436 ataacatgacatatcaacataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacc 4557337  T
Q  198 --tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
      |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  4557336 catgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaac 4557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 54317006 - 54317252
Alignment:
Q  12 aaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataac 111  Q
    ||||| ||| |||||||||||||||||||   ||||||||||| || |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  54317006 aaatacacttattttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagtttttataacacggcaattatcaaacaaaataac 54317105  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgt 200  Q
    ||| ||||| ||| |||| ||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||           ||||    
T  54317106 atggcatatcaacataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgt 54317205  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||| ||||| ||||| |||||||| |||||||    
T  54317206 tttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaac 54317252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 6738620 - 6738385
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||| ||||||||  | ||||||| ||  | |||  ||||||||||||||| ||||| |||| | ||||||||||||||||||||    
T  6738620 aatatgctcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttttattaacatggcaattatcaaacaaaataac 6738521  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcgg 211  Q
    ||||||||| ||| |||| ||||||| ||| |||| || |||| || |||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  6738520 atgacatatcaacataaagtaattttttacatttgggacgggtatgagtatggatttggggtgggtacctatatacccgttacccgtgttttgaaatcgg 6738421  T
Q  212 ggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||| ||||||||||||||||| |||||||    
T  6738420 ggaaaacccatacccatacccaaacccagtcaaaac 6738385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 19111592 - 19111841
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  19111592 tccaacaatatgatcactttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagtttttataacacgaaaattatcaaacaaa 19111691  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||||||||| ||| |||| ||||||||||| |||   | ||||||||| |||||||  |||||||||| ||||||||| |           ||||    
T  19111692 ataacatgacatat-aacataaagtaattttctacattttgtacgggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacc 19111790  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  19111791 cgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaa 19111841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 53631761 - 53631952
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| |||| |||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  53631761 tccaacaatatgctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaa 53631860  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||||| ||| |||| ||||||||||  || | || | ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  53631861 ataacatggcatatcaacataaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgt 53631952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 42758243 - 42758474
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||||| |||||||| || || ||||||||||||||| |||| ||||||||| | ||||||||||||||||||||||| |||    
T  42758243 ctcattttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttataacatggcaattatcaaacaaaataacatggcat 42758342  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgttttgaaa 207  Q
    || ||| |||| ||||||||| |||| | || ||||||||||||||||||||||||  ||||||||||||  ||||||           |||||||||||    
T  42758343 atcaacataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaa 42758442  T
Q  208 tcggggaaaacccaaacccatacccaaaccca 239  Q
    |||||| |||||||||| ||||||||||||||    
T  42758443 tcgggggaaacccaaactcatacccaaaccca 42758474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 4016275 - 4016024
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||| |||||||| || ||||||||||| || ||||| ||||||||||  |||||||||||||||    
T  4016275 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagtttttataacacatcaattatcaaacaaa 4016176  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||||||||| ||| |||  || |||||| | || | || | |||||||||||||||||| |||||||||||||||||| |           ||||    
T  4016175 ataacatgacatatcaacataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacc 4016076  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    | |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  4016075 catgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaac 4016024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 48391028 - 48390797
Alignment:
Q  27 aacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||| || ||||||||||  |  ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |    
T  48391028 aacatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataacatgacatatcaacat 48390929  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaa 215  Q
    ||| ||||||| |||||| | || |||| ||||||||||||| || ||||||||||||| ||| |           ||||||||||||||||||||||||    
T  48390928 aaagtaattttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaa 48390829  T
Q  216 aacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| ||||||||||||||||| |||||||    
T  48390828 aacccatacccatacccaaacccagtcaaaac 48390797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 34119515 - 34119763
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||| ||  ||| |||||||||| |||| |||||||||||||||||||||||||||    
T  34119515 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 34119614  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||  ||| ||||| |||  ||| || |||||| | |||| || || |||||||||||||||||||||||||||||||||||  |           ||||    
T  34119615 ata--atggcatatcaacacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacc 34119712  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  34119713 cgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaa 34119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 22536067 - 22535821
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  22536067 aatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 22535968  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac-----------ccgtgt 200  Q
    ||||||||| ||| |||||||||||| ||| |||  || | || || ||||||||||||||||||| ||| ||||||| ||||           ||||||    
T  22535967 atgacatatcaacataaaataattttttacatttaggacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgt 22535868  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||| ||||||||| || ||||||||||||||||| |||||||    
T  22535867 tttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 22535821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 44172494 - 44172733
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  44172494 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataaca 44172593  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| |           ||||||||||||||     
T  44172594 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 44172693  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||| |||||||| |||||||| ||||||    
T  44172694 atcggggaaaacccatacccatactcaaacccagtcaaaa 44172733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 44179194 - 44179433
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  44179194 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataaca 44179293  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| |           ||||||||||||||     
T  44179294 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 44179393  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||| |||||||| |||||||| ||||||    
T  44179394 atcggggaaaacccatacccatactcaaacccagtcaaaa 44179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 44639168 - 44639381
Alignment:
Q  45 tgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgt 143  Q
    ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||||||||||| ||| |    
T  44639168 tgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacat 44639267  T
Q  144 ttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaacccaaacccataccc 232  Q
    |||  | ||||||||||||||||||||||||||||||||||||||| |           |||||||||||||| ||  ||||||||||| ||||||||||    
T  44639268 ttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccataccc 44639367  T
Q  233 aaacccaatcaaaa 246  Q
    ||||||| ||||||    
T  44639368 aaacccagtcaaaa 44639381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 23580684 - 23580935
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| | || |||||||||||||| || || ||||||||||  | |||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  23580684 tccaacaatatccacactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaa 23580783  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc---------- 195  Q
    |||||||| |||||| ||| |||||||||||| ||| |||| |||  || ||||||||||||||| |||||||||||||||||| |||||              
T  23580784 aataacat-acatatcaacataaaataattttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgttacccgtttcatac 23580882  T
Q  196 -cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||| ||||||||| || ||||||||||||||||| |||||||    
T  23580883 tcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 23580935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 34025810 - 34026062
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||  ||||||||||| ||||  || ||||||||||  | |||||||||||||||||| | ||||| |||| ||||||||||||||||    
T  34025810 tccaacaatatgctccctttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaa 34025909  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc--------- 196  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || |||| |||||||| |||||||||||  |||||||||| | ||||||             
T  34025910 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatac 34026009  T
Q  197 --gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
      ||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  34026010 ctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaac 34026062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 247
Target Start/End: Complemental strand, 39655453 - 39655253
Alignment:
Q  59 ctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttg 157  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||| || |||| ||| |||| || |||||||    
T  39655453 ctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgagacgggtttg 39655354  T
Q  158 ggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||| |||||||||||||||||||           ||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  39655353 ggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaa 39655254  T
Q  247 c 247  Q
    |    
T  39655253 c 39655253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 52198022 - 52198263
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataa-catgac 116  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||  |    
T  52198022 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataaacatagc 52198121  T
Q  117 atataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgttttga 205  Q
    |||| ||| |||| ||||||| ||| ||||  | ||||||||||||||||||||||||||||||||||||||| ||||||           |||||||||    
T  52198122 atatcaacgtaaagtaattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttga 52198221  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     |||||| |||||||| ||||||||||||||||| |||||||    
T  52198222 gatcgggaaaaacccatacccatacccaaacccagtcaaaac 52198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 49579932 - 49580172
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||| |||    
T  49579932 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatcatcaaacaaaataacataaca 49580031  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||  |||| ||||||| ||| |||| || ||||||| ||||||||||| |||||||||||||||||           ||  ||||||||||||||     
T  49580032 tatcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgag 49580131  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  49580132 atcggggaaaacccatacccatacccaaacccagtcaaaac 49580172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 29842164 - 29842410
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| || ||||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  29842164 tccaacaatatgctcacttcaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 29842263  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc---------- 195  Q
    |||||||||||| || ||| |||| ||||||| ||| |||| || |||| || ||||||||||||||||||||||||||| ||| |||||              
T  29842264 aataacatgacaaatcaacataaagtaattttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatac 29842363  T
Q  196 -cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatc 242  Q
     |||||||| |||||||| |||||||| ||| ||||||||||||||||    
T  29842364 ccgtgttttaaaatcggg-aaaacccatacctatacccaaacccaatc 29842410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 31127026 - 31126846
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||||||||||||||| ||||||||||||| || |||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  31127026 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataatacgacaattatcaaacaaa 31126927  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac 187  Q
    |||||||| ||||| |||  ||  || |||||| | |||| || | ||||||||||| ||||||||||| |||||||||||    
T  31126926 ataacatggcatatcaacacaatgtagttttctgcatttgggacgagtttgggtatgagttcggggtggatacctatatac 31126846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 39728539 - 39728717
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||| |  |||||||||||||| |||| ||||| ||||  ||||||||||||||||||||||| |||    
T  39728539 ctcactttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaaaataacattaca 39728638  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc 196  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  39728639 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttaccc 39728717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 44252615 - 44252855
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||    
T  44252615 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 44252714  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||  |||| || |||||||||||||||||||||||||||||||||||||           ||  ||||||||||| ||     
T  44252715 tatcaacataaagtagttttttatatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgag 44252814  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  44252815 atcggggaaaacccatacccatacccaaacccagtcaaaac 44252855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 44953655 - 44953415
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  44953655 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 44953556  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||| |||| || ||||||| ||||| |||||||||| |||||||||||||| |           ||||||||||||||     
T  44953555 tatcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgag 44953456  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||| ||||||||||| |||||||    
T  44953455 atcggggaaaacccatacccaaacccaaacccagtcaaaac 44953415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 52572477 - 52572716
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  52572477 ctcactttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 52572576  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||| ||| |||||| |||||||||||| ||||||||||| |           ||||||||||||||     
T  52572577 tattaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgag 52572676  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||| ||||||| || ||||||||||||||||| ||||||    
T  52572677 atcgaggaaaactcatacccatacccaaacccagtcaaaa 52572716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 44107024 - 44106844
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||| ||||| ||| |||||||| ||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  44107024 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44106925  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatata 186  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| || ||||||| ||||||||||||||| | ||||||||||    
T  44106924 aataacataacatattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtagatacctatata 44106844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 17146361 - 17146202
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  17146361 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 17146262  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatata 186  Q
    ||| ||||||| ||| |||| || ||||||| ||||||||||||||||| ||||||||||    
T  17146261 aaagtaattttttacatttgggaagggtttgtgtatgggttcggggtggatacctatata 17146202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 7469998 - 7469758
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| || | |||||||||||||||||||||||| |||    
T  7469998 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataaca 7469899  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    |||  || |||| || | || ||| |||| || ||||||| ||||||||||||||||||||||||||||||| |           ||||||||||| ||     
T  7469898 tatccacataaagtagtgttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 7469799  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||| ||||||||||| ||||||||||||||||| |||||||    
T  7469798 atcagggaaaacccatacccatacccaaacccagtcaaaac 7469758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 60 - 247
Target Start/End: Original strand, 29284245 - 29284444
Alignment:
Q  60 tttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgg 158  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||| || |||| ||| | || || ||||||||    
T  29284245 tttaaatattaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatctgggacgggtttgg 29284344  T
Q  159 gtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||| ||||||||||||||||| |           ||||||||||| || |||||| |||||||| ||||||||||||||||| |||||||    
T  29284345 gtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaac 29284444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 30682695 - 30682846
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||||||||| ||| ||||||| || || ||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||| ||    
T  30682695 tttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtttttataacatgaccattatcaaacaaaataacatgacatatcaa 30682794  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgg 175  Q
    | |||| ||||||||||| ||   || ||||||| |||| |||||| |||||    
T  30682795 cataaagtaattttctacattcaggacgggtttgagtataggttcgaggtgg 30682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 10823904 - 10823759
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  10823904 acatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 10823805  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcgggg 172  Q
    ||| ||||||| ||| |||| ||  |||||||||||||||||||||    
T  10823804 aaagtaattttttacatttgggagaggtttgggtatgggttcgggg 10823759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 23154243 - 23154056
Alignment:
Q  59 ctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttg 157  Q
    ||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||| ||||||| ||| |||| ||| ||| ||    
T  23154243 ctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggataggtatg 23154145  T
Q  158 ggtatgggttcggggtgggtacctatataccctttacccgt---------gt-tttgaaatcggggaaaacccaaacccatacccaaac 236  Q
     |||||||||||| |||||||||||||||| | ||||||||         || ||||||||||||||||||||| ||||||||||||||    
T  23154144 agtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtgtttgaaatcggggaaaacccatacccatacccaaac 23154056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 830884 - 831039
Alignment:
Q  25 ttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaac 124  Q
    ||||||||| ||||||| |||||||||||| || ||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||  ||||| |||    
T  830884 ttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagtttttataagacggcaattatcaaacaaaataacatagcatattaac 830983  T
Q  125 ctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacc 180  Q
     |||| ||||||||| | || | || |  ||||||||||||||| |||||||||||    
T  830984 ataaagtaattttctgcattcgggacgaatttgggtatgggttcagggtgggtacc 831039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 34154274 - 34154522
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||| |||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  34154274 tccaacaatatgttcactttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 34154373  T
Q  106 aataacatgacatataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctata-------taccctt----ta 193  Q
    ||||||||     || ||| |||| ||||||| | || |||| || |||| |||||||||||||||||||||||||||||       ||||| |    ||    
T  34154374 aataacat-----atcaacataaagtaatttttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcata 34154468  T
Q  194 cccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||| ||||||||||||||||||||| || ||||||| ||||||||| |||||||    
T  34154469 cccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaaac 34154522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 41937221 - 41937077
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||| |||||||||||||||||||||||||||||||  |  ||| |||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  41937221 ctcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtctttataacacgacaattatcaaacaaaataatatgacat 41937122  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatg 163  Q
     | |||  ||| || |||||| | |||| || | |||||||||||    
T  41937121 gtcaacacaaagtagttttctgcatttgagacgagtttgggtatg 41937077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 43582434 - 43582625
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttata-acacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||||||||||||  | ||||||||||  | | |||||||||||||||||| |||||  ||| || |||||||||||||    
T  43582434 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgataattatcaaacaa 43582533  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||| ||  |||| ||||||| ||| |||| || |||| ||  ||||||||| ||||||||||||| |||| | ||||||||    
T  43582534 aataacatgacatatcaatataaagtaattttttacatttgggacgggtatgaatatgggttc-gggtgggtacctacatacacgttacccgt 43582625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 49025549 - 49025728
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||| ||||||  | ||||||||||  | |||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||| |||    
T  49025549 ctcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaattatcaaacaaaataacataaca 49025648  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| |||  ||| ||||||| ||| |||| || |||||||||||||||||| || || |||||||||||||  ||||||||    
T  49025649 tatcaacacaaagtaattttttacatttgggacgggtttgggtatgggttc-ggatgtgtacctatatacctgttacccgt 49025728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 48306756 - 48306657
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||||| ||||||||||| || ||||||||||  | ||||||||||||||| |||| |||| ||||| ||||||||||||||||| ||||||||||    
T  48306756 ctcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgacaattatcaaacaaattaacatgaca 48306657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 23547027 - 23546982
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  23547027 gtttgggtatgggttcggggtgggtacctatatacccgttacccgt 23546982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 48305753 - 48305622
Alignment:
Q  126 taaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc--------tt---tacccgtgttttgaaatcgggga 214  Q
    |||| ||||||| ||| ||||  | |||||||||||| ||||||||||||||||||||||||||        ||   ||||||||||||||||| |||||    
T  48305753 taaagtaattttttacatttggaacgggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattgggga 48305654  T
Q  215 aaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||| || ||||||| ||||||||| ||||||    
T  48305653 aaactcatacccataaccaaacccagtcaaaa 48305622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 2490358 - 2490411
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||    
T  2490358 tacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 10043317 - 10043264
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||| |||||    
T  10043317 tacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaa 10043264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 42243440 - 42243493
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||    
T  42243440 tacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaa 42243493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 30616392 - 30616273
Alignment:
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctata-------taccctt----tacccgtgttttgaaatcggggaa 215  Q
    ||||||||||| |||||||| || |||| |||||||||||||||||||| ||  ||||       ||||| |    || |||||||||||||||||||||    
T  30616392 aaaataattttttacgtttgggacgggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaa 30616293  T
Q  216 aacccaaacccatacccaaa 235  Q
    ||||||||||||||| ||||    
T  30616292 aacccaaacccatactcaaa 30616273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 23547152 - 23547081
Alignment:
Q  59 ctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaa 129  Q
    |||||||||| |||| |||| ||||| |||| |||||||||||||||||||||||| |||||| ||| ||||    
T  23547152 ctttaaatataaatgctagtttttattaacatgacaattatcaaacaaaataacataacatattaacataaa 23547081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 14208271 - 14208363
Alignment:
Q  20 tcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacat 113  Q
    ||||||||||||||  | ||| || |||||| ||| || |||||||||||||||  | | ||||||||| |||||||||||||| |||||||||    
T  14208271 tcattttaacatttccttgactgaatgattttgttgctcctttaaatatcaatgacatt-tttataacatgacaattatcaaaccaaataacat 14208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 23910284 - 23910232
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||| ||||||| ||||| ||||| |||||||| |||||||    
T  23910284 ccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaaac 23910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 23910385 - 23910341
Alignment:
Q  97 atcaaacaaaataacatgacatataaacctaaaataattttctac 141  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||    
T  23910385 atcaaacaaaataacatgacatatcaacataaagtaattttctac 23910341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 55438896 - 55438828
Alignment:
Q  22 attttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacg 90  Q
    |||||||||||||||| | |||||||||||||| || ||  ||||||| |||||||| || ||||||||    
T  55438896 attttaacatttgttaaagcgattgatttagttgctcctccaaatatcgatggtagttttaataacacg 55438828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 185
Target Start/End: Complemental strand, 30904899 - 30904868
Alignment:
Q  154 tttgggtatgggttcggggtgggtacctatat 185  Q
    ||||||||||||||||||||||||||||||||    
T  30904899 tttgggtatgggttcggggtgggtacctatat 30904868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 43582630 - 43582677
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||||||||| || || ||||| ||||||||    
T  43582630 tacccgtgttttgaaatcggggaaaactcatacacatactcaaaccca 43582677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 49025733 - 49025768
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    |||||||||||||| |||||||||||||||||||||    
T  49025733 tacccgtgttttgagatcggggaaaacccaaaccca 49025768  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 3414568 - 3414519
Alignment:
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||  |||||||| ||||| |||||||||| |||||||||||||||    
T  3414568 cgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaa 3414519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 35687526 - 35687473
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| || |||||||||||||||| ||||| ||||| |||||||| |||||    
T  35687526 tacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaa 35687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 2487796 - 2487824
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtac 179  Q
    |||||||||||||||||||||||||||||    
T  2487796 gggtttgggtatgggttcggggtgggtac 2487824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 10371314 - 10371266
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 240  Q
    |||||||||||||| || |||||||| ||| || |||||||||||||||    
T  10371314 tacccgtgttttgagattggggaaaatccatactcatacccaaacccaa 10371266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 27252626 - 27252670
Alignment:
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||| || |||||| ||||| ||||||||||||||||||||    
T  27252626 tttgaaattggagaaaactcaaactcatacccaaacccaatcaaa 27252670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 55438812 - 55438768
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |||||||||||| |||| |||||||||| ||| ||||||||||||    
T  55438812 tacccgtgtttttaaattggggaaaacctaaatccatacccaaac 55438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 10188293 - 10188060
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| | |    
T  10188293 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcgaacaaaataacataata 10188194  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt----tacccgtgttttgaaatcgggg 213  Q
    ||| ||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |    |||||||||||||| |||||||    
T  10188193 tatcaacataaaataattttttacatttgggatgggtttgggtatgggttcggggtgggtacctatatacccgtcccatacccgtgttttgagatcgggg 10188094  T
Q  214 aaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||| ||||||||||||||||| |||||||    
T  10188093 aaaacccatacccatacccaaacccagtcaaaac 10188060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 24603081 - 24602896
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  24603081 aatatgctcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagtttttataacacgtcaattatcaaacaaaataaca 24602982  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || || || ||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  24602981 tggcacatcaacataaagtaattttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgt 24602896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 12678318 - 12678074
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||||| ||| |||||||||||||||||||| || ||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  12678318 aatatgctcactttaac-tttattagaccgattgatttagttgctcctttaaatatcaatgataatttttataacacgacaattatcaaacaaaataaca 12678220  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgtt 201  Q
    |||||||| ||  ||||||||||||||   || | || |||||||||||||||||| |||||||||||||||||||||||||||           ||||     
T  12678219 tgacatatcaatataaaataattttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtc 12678120  T
Q  202 ttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  12678119 ttgaaatcggggaaaacgcaaactcatacccaaacccagtcaaaac 12678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 14032413 - 14032579
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  14032413 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaacaaa 14032512  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggt 173  Q
    |||||||||||||| ||| |||| ||||||| | | |||| || |||||||||||||||||||||||    
T  14032513 ataacatgacatatcaacataaagtaattttatgcatttgggacgggtttgggtatgggttcggggt 14032579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 5863615 - 5863363
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||| ||||| ||| |||||| ||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| || |||||||||||||    
T  5863615 tccaataataaactcactttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 5863516  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||| |||||| ||| ||||||| |||| ||| |||| || ||||||||||||||||||| |||||||| |||||||||| |           |||    
T  5863515 aataacataacatatcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatac 5863416  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  5863415 ccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 5863363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 10142738 - 10142498
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  10142738 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 10142639  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| ||| |||| ||  |||||||||||| ||||||||||||||||||||||||| |           ||||||| ||||||     
T  10142638 tatcaacataaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgag 10142539  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  10142538 atcggggaaaacccatacccatacccaaacccagtcaaaac 10142498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 2367194 - 2367434
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  2367194 ctcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 2367293  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    |||  || |||| ||||||| | | |||| || ||||||||||||||||||||||||||||| ||||||||| |           ||||||||||||||     
T  2367294 tatccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgag 2367393  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||| | |||||||    
T  2367394 atcggggaaaacccatacccatacccaaacctagtcaaaac 2367434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 240
Target Start/End: Original strand, 24225575 - 24225799
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  24225575 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 24225674  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac-----------ccgtgttttgaaatcggggaa 215  Q
    ||||||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||||| ||||           ||||||||||| |||||||||    
T  24225675 aaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaa 24225774  T
Q  216 aacccaaacccatacccaaacccaa 240  Q
    || ||| ||||||||||||||||||    
T  24225775 aatccatacccatacccaaacccaa 24225799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 32853712 - 32853952
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  ||||||||||||||||||| ||||| |||| | |||||||||||||||||||||| |||    
T  32853712 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataaca 32853811  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||     
T  32853812 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 32853911  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  32853912 atcggggaaaacccatacccataaccaaacccagtcaaaac 32853952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 14505943 - 14506174
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||||||||||||||| ||||||||||||| || |||| |||||||||| |||| |||||||||||||||||||||||||||    
T  14505943 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 14506042  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacc 195  Q
    ||||| |||||||| |||  ||| || |||||| | |||| || ||||||  |||||||||||||||||||||||| ||||           ||  ||||    
T  14506043 ataacgtgacatatcaacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacc 14506142  T
Q  196 cgtgttttgaaatcggggaaaacccaaaccca 227  Q
     |||||||||||||||||||||||||||||||    
T  14506143 tgtgttttgaaatcggggaaaacccaaaccca 14506174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 247
Target Start/End: Original strand, 27738666 - 27738880
Alignment:
Q  45 tgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgt 143  Q
    |||||||||| || |||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||| |||||| ||| |||| ||||||| ||| |    
T  27738666 tgatttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacat 27738765  T
Q  144 ttgtgatgggtttgggtatgggttcggggtgggtacctata-------taccctt----tacccgtgttttgaaatcggggaaaacccaaacccataccc 232  Q
    ||| || ||||||||||||||||||||||||||||| ||||       ||||| |    |||||||||||||||||||||||||||||| |||||||||     
T  27738766 ttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacct 27738865  T
Q  233 aaacccaatcaaaac 247  Q
    ||||||| |||||||    
T  27738866 aaacccagtcaaaac 27738880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 11762308 - 11762493
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| || |||||||||  ||||||| | | | |||||||| || || ||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  11762308 aatatgcttattttaacaaatgttagatccaataatttagttgctcctataaatatcaatggtagtttttataacacgacaattatataacaaaataaca 11762407  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || ||||| ||| |||| ||||||||||| |||| |||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  11762408 tggcatatcaacataaagtaattttctacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgt 11762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 27534561 - 27534792
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | | ||||||||  ||||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  27534561 acatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 27534660  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaa 215  Q
    ||| || |||| ||| |||| || |||||||||||||| |||||||||||||||||||||||| |           ||||||||||| || |||||||||    
T  27534661 aaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaa 27534760  T
Q  216 aacccaaacccatacccaaacccaatcaaaac 247  Q
    ||| || |||||||||||||||||||||||||    
T  27534761 aactcatacccatacccaaacccaatcaaaac 27534792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 12141247 - 12141493
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    |||| ||||| ||| |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| || | ||||||||||||||||||||||    
T  12141247 aataaactcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataac 12141346  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgt 200  Q
    || || ||| ||| |||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           || ||||||    
T  12141347 ataacgtatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgt 12141446  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| || |||||||||||| |||| |||||||||||| |||||||    
T  12141447 tttgagattggggaaaacccatacccgtacccaaacccagtcaaaac 12141493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 7394118 - 7393927
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||||||  | ||||||||||||||| |||| |||||||||||  ||||||||||||||    
T  7394118 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 7394019  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||| |||| |||  ||| |||||||| ||| | | ||   |||| ||||| ||||||||||||||||| ||||||||||||| ||| ||||    
T  7394018 ataatatgatataccaacataaaataaatttatgcattcaggatgagtttgagtatgggttcggggtggatacctatatacccattatccgt 7393927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 3484143 - 3483903
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| || | ||||||||| |||||||||||||| |||    
T  3484143 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatgaaacaaaataacataaca 3484044  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    |||  || |||| || |||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||| ||     
T  3484043 tatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgag 3483944  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| || |||||||||||||| |||||||    
T  3483943 atcggggaaaacccatacacatacccaaacccagtcaaaac 3483903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 30816131 - 30816366
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    ||||||||||||||||||||||||||||| | || |||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||| |||||| ||    
T  30816131 tttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagtttttataacacggcaattatccaacaaaataacatcacatatcaa 30816230  T
Q  124 cctaaaataattttcta---cgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt---------gttttgaaatcgg 211  Q
    | |||| || |||| |    | || | || |||||||| |||||||||||||||||| ||||||||||| |||||| |         || || |||  ||    
T  30816231 cataaagtagtttttttttgcattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgtttaaaatgg 30816330  T
Q  212 ggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| |||||||||| |||||||||||||||||    
T  30816331 ggaaaactcaaacccatatccaaacccaatcaaaac 30816366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 14411058 - 14410954
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  14411058 aatatgctcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggtttttataacacgacaattatcaaacaaaataaca 14410959  T
Q  113 tgaca 117  Q
     ||||    
T  14410958 cgaca 14410954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 12309452 - 12309673
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||||||||||  | ||||||| || |  ||||||||||||||| ||||      || | ||||||||||||||||||||||||||||||| ||    
T  12309452 tttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatagt------aatatgacaattatcaaacaaaataacatgacatatcaa 12309545  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacc-----------ctttacccgtgttttgaaatcggg 212  Q
    | |||| ||||||| ||| |||| || |||||||||||| |||||||||||||||| ||||||||           |  |||||||||||||||||| ||    
T  12309546 cataaagtaattttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagg 12309645  T
Q  213 gaaaacccaaacccatacccaaacccaa 240  Q
    ||| ||||| ||||||||||||||||||    
T  12309646 gaatacccatacccatacccaaacccaa 12309673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 14245121 - 14245214
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgaca 117  Q
    |||||||||| ||||||||| |||||||||  || |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14245121 tttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagtttttataacacgacaattttcaaacaaaataacatgaca 14245214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 32053022 - 32053136
Alignment:
Q  84 taacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctat 183  Q
    ||||| || |||||||||||||||||||||||||||| ||| |||| || |||| ||| |||  || ||||||||||||||||| ||||||||||| |||    
T  32053022 taacatgataattatcaaacaaaataacatgacatatcaacataaagtatttttttacattttggacgggtttgggtatgggtttggggtgggtacatat 32053121  T
Q  184 ataccctttacccgt 198  Q
    |||||| ||||||||    
T  32053122 atacccgttacccgt 32053136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 14254832 - 14255065
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||| ||||||||| ||||||| |  || ||||||||||||||| |||| ||||||||||  ||| | ||||||||||||||||||||||| ||    
T  14254832 tttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagtttttataacacatcaaatttcaaacaaaataacatgacatatcaa 14254931  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt---------gt-tttgaaatcgggg 213  Q
    | |||| | ||| | | | |||| || |  |||||||||||||||  |||||||||||||||  || |||| |||         || ||||||||| | |    
T  14254932 cataaagttattatttgcatttgggacgaatttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtgtttgaaatcagag 14255031  T
Q  214 aaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| |||||||||||||||||||| |||||||    
T  14255032 aaaactcaaacccatacccaaacccagtcaaaac 14255065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 32532498 - 32532648
Alignment:
Q  108 taacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------taccc 196  Q
    ||||||||||||| ||| |||| ||||||| ||| |||| || |||| || ||||||||||||||||||||||||||||||| |           |||||    
T  32532498 taacatgacatatcaacataaagtaattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccataccc 32532597  T
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||| || ||||| |||||||||| |||||    
T  32532598 gtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaac 32532648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 28079780 - 28079687
Alignment:
Q  154 tttgggtatgggttcggggtgggtacctatataccctttacccgt-----------gttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||           ||||||||||||||||||||||||||||||||||||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaac 28079687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 15498325 - 15498432
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||           |||||||||||||||||||||||||| | |||||||||||||||    
T  15498325 gggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccatatccatacccaaaccca 15498424  T
Q  240 atcaaaac 247  Q
     |||||||    
T  15498425 ttcaaaac 15498432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 14410942 - 14410895
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14410942 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 14410895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 256597 - 256474
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-----------tgttttgaaatcggggaaaaccca 221  Q
    ||||||||| |||  || ||||||||||||||||| ||||||||||||||||| ||| |||||||           ||||||||||||||||||||| ||    
T  256597 attttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactca 256498  T
Q  222 aacccatacccaaacccaatcaaa 245  Q
    ||| ||||||||||| ||| ||||    
T  256497 aactcatacccaaacacaaccaaa 256474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 30986306 - 30986361
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| || |||||||    
T  30986306 tacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaac 30986361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 32532420 - 32532497
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat 84  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||| ||||||| |||||    
T  32532420 tccaataatatgctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttat 32532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 20611017 - 20610970
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  20611017 tacccgtattttgaaatcggggaaaccccaaacccatacctaaaccca 20610970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 9442483 - 9442528
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacc 237  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||    
T  9442483 tacccgtgttttgaaatcgggaaaatcccatacccatacccaaacc 9442528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 9458911 - 9458964
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| || | ||||||||||||||||| ||||||||||||||||| |||||    
T  9458911 tacccgtattattaaatcggggaaaacccagacccatacccaaacccagtcaaa 9458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 13769125 - 13769178
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||| ||||||||| |||||||||||| ||||||||||| ||||||| |||||    
T  13769125 tacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaa 13769178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 20349117 - 20349166
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaat 241  Q
    |||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  20349117 tacccgtgttttgaaatcggggaaaatccaaactcataccaaaactcaat 20349166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 30624481 - 30624521
Alignment:
Q  205 aaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  30624481 aaatcggggaaaacccaaacccaaacccaaacccagtcaaa 30624521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 31496487 - 31496542
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| ||||| || |||||||||||| || ||||||||||||||||| |||||||    
T  31496487 tacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaac 31496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 31501873 - 31501928
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| ||||| || |||||||||||| || ||||||||||||||||| |||||||    
T  31501873 tacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaac 31501928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 17546926 - 17546884
Alignment:
Q  203 tgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||| ||||| |||||||||||||||||||||| |||||    
T  17546926 tgaaatcgaggaaaccccaaacccatacccaaacccagtcaaa 17546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 29341322 - 29341364
Alignment:
Q  205 aaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||| ||||||||||| |||| |||||||||||||||||    
T  29341322 aaatcgggaaaaacccaaactcatatccaaacccaatcaaaac 29341364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 5108960 - 5108919
Alignment:
Q  198 tgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||| ||||| |||||||||||| |||||||    
T  5108960 tgttttgaaatcgggaaaaactcaaacccataccgaaaccca 5108919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 8320830 - 8320797
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacc 225  Q
    ||||||||||||||||| ||||||||||||||||    
T  8320830 tacccgtgttttgaaattggggaaaacccaaacc 8320797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 9458716 - 9458769
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||| ||||||| | ||||| |||||||||||||| |||||    
T  9458716 tacccgtattttgaaattggggaaatctcaaactcatacccaaacccagtcaaa 9458769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 18908949 - 18908990
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |||| ||||||||||||||||||||||||| ||||| |||||    
T  18908949 ccgtattttgaaatcggggaaaacccaaactcatactcaaac 18908990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 32052930 - 32052979
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatg 73  Q
    ||||||||||||||||| || ||||||| ||| | |||||||||||||||    
T  32052930 tttaacatttgttagacggaatgatttatttaatcctttaaatatcaatg 32052979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 32959844 - 32959908
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||| ||| ||| || ||||| |||||||||||||||| ||||||||| ||| ||||||||    
T  32959844 attttctacatttatgacggatttgg-tatgggttcggggtggatacctatatccccgttacccgt 32959908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 30 - 247
Target Start/End: Complemental strand, 6092728 - 6092510
Alignment:
Q  30 atttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaa 128  Q
    |||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| ||||   |||||||||||||||||||||| |||||| ||| |||    
T  6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
Q  129 aataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccat 228  Q
    | ||||||| ||| |||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||    
T  6092628 agtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtgttttgagatcgggaaaaacccatacccat 6092529  T
Q  229 acccaaacccaatcaaaac 247  Q
    |||||||||||||||||||    
T  6092528 acccaaacccaatcaaaac 6092510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 6156148 - 6155901
Alignment:
Q  10 aaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataac-acgacaattatcaaacaaaat 108  Q
    |||||||| |||| ||||||||||||||||| || ||||||| || || ||||||||||||||| || | ||||| || | |||||||||||||||||||    
T  6156148 aaaaatatgctcactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattaccatgacaattatcaaacaaaat 6156049  T
Q  109 aacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac---------cctttacccgtg 199  Q
    |||||| ||||||||| |||| |||||||| || ||||||| || |||||||||||||||||||||||||| |||||||         ||| ||||||||    
T  6156048 aacatgtcatataaacataaagtaattttcaacatttgtgacggttttgggtatgggttcggggtgggtacatatataccttacctgtcctatacccgtg 6155949  T
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  6155948 ttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaaac 6155901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 12447238 - 12447426
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||| ||| |||||||||||||||| |||||||||||  | || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12447238 tccaacaatatattcactttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 12447337  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    |||||||||||||| ||| |||| || |||||||  |||| || |||||||||||| |||||||||||||||||||||||||| |||||    
T  12447338 ataacatgacatattaacataaagtagttttctatatttgggacgggtttgggtataggttcggggtgggtacctatatacccattacc 12447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 4582975 - 4583227
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||| ||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  4582975 tccaacaatatgctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 4583074  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||||||||||||| ||| |||| ||||||| ||| |||| || |||| |||||||||||| |||||||| |||||||||||| |           |||    
T  4583075 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatac 4583174  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  4583175 ccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaac 4583227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 29246184 - 29245932
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||| ||  ||| |||||||||||||||||||||||| ||||  |||||||||||||||    
T  29246184 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggtagtgtttattaacataacaattatcaaacaa 29246085  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttac 194  Q
    ||||||||||||||  ||| |||||||||||| ||| |||| ||||||| |||||||||||| |||||||||||||||||||           ||  |||    
T  29246084 aataacatgacataccaacataaaataattttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatac 29245985  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||| |||||| || ||||||||||||||| | |||||||    
T  29245984 ccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaac 29245932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 3573087 - 3573243
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  3573087 aatatgctcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagtttttataacacgacaattatcaaacagaataaca 3573186  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcg 169  Q
    |||||||| ||| |||||||||||||||| || | || ||||||| |||||||||||    
T  3573187 tgacatatcaacataaaataattttctacattcgggaggggtttgagtatgggttcg 3573243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 38006701 - 38006522
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| ||| |||||||| |||||||||| |||||||||||| || ||||||||||||||||| || ||||||| ||||| |||||||||||||    
T  38006701 tccaacaatatgctcgttttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggtttttataatacgactattatcaaacaaa 38006602  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatata 186  Q
    |||||||||||||| ||| |||| |||||||| || || | || || |||||||||||||||||||||||||||||||||    
T  38006601 ataacatgacatattaacataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatata 38006522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 3564960 - 3564719
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  3564960 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 3564861  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggt-gggtacctatataccctttacccgtgttttg 204  Q
    |||||||| |||||| ||| |||| ||||||| ||| ||||  | |||| ||| ||||||||||| || |||||||||||||||  |||  |||||||||    
T  3564860 aataacat-acatatcaacataaagtaattttttacatttggaacgggtatggatatgggttcggagtagggtacctatatacctgttattcgtgttttg 3564762  T
Q  205 aaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| ||||| ||| ||||||||||||||||| |||||||    
T  3564761 aaatcggagaaaatccatacccatacccaaacccagtcaaaac 3564719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 40517674 - 40517914
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  40517674 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 40517773  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| ||| |||| || ||||||| |||||||||||||||||||| |||||||||| |           |||||||||||||      
T  40517774 tatcaacataaaataattttttacctttgggacgggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttggg 40517873  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  40517874 atcggggaaaacccatacccatacccaaacccagtcaaaac 40517914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 177
Target Start/End: Complemental strand, 27088566 - 27088414
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||  ||||||||||||||||||||||| |||||| ||    
T  27088566 tttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacataacaattatcaaacaaaataacat-acatatcaa 27088468  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggt 177  Q
    | |||||||||||||||| || | || |||||||||||||||||||||||||||    
T  27088467 cataaaataattttctacattcgagacgggtttgggtatgggttcggggtgggt 27088414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 17853524 - 17853274
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  17853524 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 17853425  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt------- 198  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| || |||| ||||||||||||||| ||||||| ||||||| || ||||||||           
T  17853424 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatac 17853326  T
Q  199 --gt-tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
      || ||||||||||||||||||||| | |||||||||||||||||||||||    
T  17853325 ccgtgtttgaaatcggggaaaacccatatccatacccaaacccaatcaaaac 17853274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 4920694 - 4920934
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  4920694 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 4920793  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||| ||||||||||||| |           ||||||||||||||     
T  4920794 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgag 4920893  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  4920894 atcggggaaaacccatacccataaccaaacccagtcaaaac 4920934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 35194204 - 35194030
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||  ||||| ||    
T  35194204 tttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagtttttataacacagcaattatcaaacaaaataacatagcatattaa 35194105  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    | |||| ||||||||||| || | || ||||||| ||||| ||| ||||||||||||||||||||| ||||||||    
T  35194104 cataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgt 35194030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 2985010 - 2985195
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||| |||||||||||| |||||||||    
T  2985010 aatatgctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaataaaataaca 2985109  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||  |||||||||||||||  || | ||  | ||||||||||| |||||| || |||||||||||||| ||||||||    
T  2985110 tgacatatcaatataaaataattttctatattcgagacagatttgggtatggtttcgggatgagtacctatatacccgttacccgt 2985195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 1218619 - 1218800
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  1218619 aatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataaca 1218718  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    | ||| || ||| |||| ||||||| ||| |||| || |||| ||||||||||||||| |||||||||||||||||| |||||    
T  1218719 t-acaaatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtacctatatacccgttacc 1218800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 35311679 - 35311858
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  35311679 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 35311778  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatata 186  Q
    |||||||| |||||| ||| |||||||||||| ||| |||| || |||| || |||||||||||| |||||||||||||||    
T  35311779 aataacat-acatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggagtgggtacctatata 35311858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 22695122 - 22694951
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | |||| |||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  22695122 ctcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacattaca 22695023  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    ||| ||| |||||||||||| ||| |||| || ||||||||||||||||||||||||||||||| |||||||    
T  22695022 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctctataccc 22694951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 42987700 - 42987460
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||    
T  42987700 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 42987601  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||||| || |           ||||||||||||||     
T  42987600 tatcaacataaaataattttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgag 42987501  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||| ||| |||| ||||||||| || |||||||    
T  42987500 atcggggaaaatccatacccgtacccaaactcagtcaaaac 42987460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 5908909 - 5908670
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  5908909 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 5908810  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||| |||||| |||| ||||||||| |           ||||||||||| ||     
T  5908809 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgag 5908710  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  5908709 atcggggaaaactcatacccatacccaaacccaatcaaaa 5908670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 246
Target Start/End: Complemental strand, 2412958 - 2412708
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||| |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  2412958 tccaacaatatgctcactttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagtttttatgacacaacaattatcaaacaaa 2412859  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||||||||| ||  |||| ||||||||| | |  | || | |||||||||| ||||| || ||||||| ||||||||| |           ||||    
T  2412858 ataacatgacatatcaatataaagtaattttctgcatacgggacgagtttgggtattggttcaggatgggtacatatatacccgttatttatcccatacc 2412759  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||||    
T  2412758 cgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaa 2412708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 30115340 - 30115522
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| ||||| |||| ||||||||||||||||| ||| ||||||||| || |||||||||| |||||| || ||||||||||| |||||||||||||||    
T  30115340 tccaacaatatgctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggtttttataacacggcaattatcaaacaaa 30115439  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    |||||||  ||||| ||| |||||||||||| | | || | || |||||||  |||||||||||| |||||||| ||||||||    
T  30115440 ataacatagcatatcaacataaaataattttatgcattcgggacgggtttgaatatgggttcgggatgggtaccaatataccc 30115522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 30996465 - 30996704
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||||||||| ||||||| || ||||||| ||  | ||||||||||||| |||||| ||||| |||| ||||||||||||||||||||||||| ||    
T  30996465 ctcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacatggca 30996563  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || |||||||||| || ||||||||||||||||||||||||| |||||           |||||||| ||    
T  30996564 tatcaacttaaagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaa 30996663  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| ||||||||| || |||||||||||||| |||||||    
T  30996664 atcggagaaaacccatactcatacccaaacccagtcaaaac 30996704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 28045511 - 28045703
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat--aacacgacaattatcaaaca 104  Q
    ||||| |||||  ||| |||||||||||||||||  | ||||||||||  | ||||||||||||||| |||| |||||  ||||  |||||||| |||||    
T  28045511 tccaacaatatgttcactttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacataacaattataaaaca 28045610  T
Q  105 aaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||||||||||| ||| |||| ||||||| ||| |||| || |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  28045611 aaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgttacccgt 28045703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 12834802 - 12834556
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  |  |||||| ||  |  || |||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  12834802 aatatgctcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 12834703  T
Q  112 at-gacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-----------tg 199  Q
    || ||||||| ||| |||| ||||||| ||| |||| || |||| |||||||||||||||||| ||||||||||||||  |||||||           ||    
T  12834702 atagacatatcaacataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatg 12834603  T
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||||||    
T  12834602 ttttgaaattggagaaaacccatacccatacccaaacccagtcaaaa 12834556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 13402235 - 13402045
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| ||||||||||||||||||||||  | ||||||||||  | |||||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  13402235 tccaacaatatgctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaa 13402136  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| || |||| | ||| ||||||||| ||||||||||| |||||| ||||||||    
T  13402135 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatcggt-tgggttcggagtgggtacctaaatacccgttacccgt 13402045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 8453598 - 8453426
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| | ||||||||| ||||||||| ||||||||||||     
T  8453598 aatatgctcattttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaatttttataacatgacaattattaaacaaaataac- 8453500  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatg-ggtttgggtatgggttcggggtgggtacctatata 186  Q
     ||||||| ||| |||| ||||||||||| |||| || | | |||| |||||  || |||||| |||||||||||    
T  8453499 -gacatattaacataaactaattttctacatttgggacgagttttgagtatgactttggggtgtgtacctatata 8453426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 10127058 - 10127182
Alignment:
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt----tacccgtgttttgaaatcggggaaaacccaa 222  Q
    ||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |    |||||||||||||| |||||||||||||||     
T  10127058 aaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcccatacccgtgttttgagatcggggaaaacccat 10127157  T
Q  223 acccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||| |||||||    
T  10127158 acccatacccaaacccagtcaaaac 10127182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 246
Target Start/End: Complemental strand, 12866729 - 12866533
Alignment:
Q  63 aaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacat-gacatataaacctaaaataattttctacgtttgtgatgggtttgggt 160  Q
    |||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||| ||| |||| ||||||| ||| |||| || |||| |||||    
T  12866729 aaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatagacatatcaacataaagtaattttttacatttgggacgggtatgggt 12866630  T
Q  161 atgggttcggggtgggtacctatataccctttacccg-----------tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||| ||||||||||||||||||  |||||||           |||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  12866629 atgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaa 12866533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 18206891 - 18207126
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgac-aattatcaaacaaaataacatgacatataa 122  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||| | ||||| ||||||||||| | |||||| ||||||||||||||| ||||| |    
T  18206891 tttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagtttttataacacggcaaattattaaacaaaataacatggcatatca 18206990  T
Q  123 accta-aaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttgaaatcg 210  Q
    || || || ||||||||||| || | || |||||||  ||||||||| |||||||||||||||||||  |||||           || ||||||||||||    
T  18206991 acatagaagtaattttctacattcgggacgggtttgaatatgggttc-gggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcg 18207089  T
Q  211 gggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||| ||| |||||||||| |||||||    
T  18207090 aggaaaacccaaactcatgcccaaacccagtcaaaac 18207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 15890080 - 15890254
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    |||||||||||||||||  | | ||||| ||  | ||| |||||||||||||||| || || || | ||||||||||||| ||||||||||||||||| |    
T  15890080 tttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatgacaattatcaaataaaataacatgacatatca 15890179  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    || |||| ||||||| ||| |||| || |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  15890180 acataaagtaattttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgttacccgt 15890254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 20973706 - 20973477
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||||| |||| |||||| || ||||||||||  | ||||| |||||||||||||| ||||| |||| |||||||||||||||||||| |||||||    
T  20973706 ctcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgacaattatcaaacaaaataccatgaca 20973607  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| ||||||| |||            |||||||||||||||||||||||||||||||||||| |           |||||||||||  ||    
T  20973606 tatcaacataaagtaattttttac-----------atttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaa 20973518  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||| ||||||||| |||||||    
T  20973517 atcggggaaaacccatacccataaccaaacccagtcaaaac 20973477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 27302965 - 27302788
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||||  || ||||||||||  | ||||||||||||||||||    |  ||||| |||||||||||||||||    
T  27302965 tccaacaatatgatcactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtacg--tagtaacatgacaattatcaaacaaa 27302868  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatata 186  Q
    |||||||||||||| ||| |||| ||||||| |||||||| || | || ||  ||||| |||||||||||||||||||||    
T  27302867 ataacatgacatattaacataaagtaattttttacgtttgggacgtgtatgactatggattcggggtgggtacctatata 27302788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 42717847 - 42717756
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatc-aaacaaaataacatg 114  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||    
T  42717847 tttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagtttttataacacgacaattatcaaaacaaaatatcatg 42717756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 43523760 - 43523854
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||| ||||||||||| ||| ||||| ||| |||||||| ||||||||||||||||||||||||| ||||||||||| || |||||    
T  43523760 gggtttgggtatgagttcggggtggatacatatatccccgttacccgtattttgaaatcggggaaaacccaaactcatacccaaactcagtcaaa 43523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 33862415 - 33862284
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||| || ||||||||||||  |  ||||||||||||| ||||| |||| |||| |||||||||||||||||    
T  33862415 tccaacaatatgttcactttaacatttgttagccc-attgatttagttggtcatttaaatatcaatcgtagtttttacaacatgacaattatcaaacaaa 33862317  T
Q  107 ataacatgacatataaacctaaaataattttct 139  Q
    |||||||| ||||| ||| ||||||| ||||||    
T  33862316 ataacatggcatatcaacataaaatagttttct 33862284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 18116594 - 18116500
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||| ||||||||||| ||| ||||| ||| |||||||| |||||||||||| |||||||||||| ||||||||||| || |||||    
T  18116594 gggtttgggtatgagttcggggtggatacatatatccccgttacccgtattttgaaatcggagaaaacccaaactcatacccaaactcagtcaaa 18116500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 6369569 - 6369803
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||||| || ||||||||||  |  |||||| ||||| |||||| || || |||| || |||||||||||||||||||| |||  || |    
T  6369569 tttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataattatcaaacaaaataacacgacgcatca 6369668  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc----------cgtgttttgaaatcggg 212  Q
    || |||| ||||||| ||| |||  || |||||   ||||||||||||||||||||| ||||||| | |||||          ||| |||||||||| ||    
T  6369669 acataaagtaattttttacattttggacgggttaaagtatgggttcggggtgggtacatatatacacgttaccctcccatactcgtattttgaaatcagg 6369768  T
Q  213 gaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| || |||||| ||||||| ||||||||||    
T  6369769 gaaaactcatacccatgcccaaactcaatcaaaac 6369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 246
Target Start/End: Complemental strand, 33420494 - 33420329
Alignment:
Q  75 tagtgtttataacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtg 174  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| ||  |||||| ||||||||| ||   || |||||||||||||||||| |  ||    
T  33420494 tagtttttataacacgacaattatcaaataaaataacatgacatatcaatataaaat-attttctacattcaagacgggtttgggtatgggttcagaatg 33420396  T
Q  175 ggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||     ||   || ||||| |||||||| || |||| |||||| ||||| |||||||||||||||    
T  33420395 ggtaccta-----cccaaactcgtgtcttgaaatcaggaaaaatccaaactcatactcaaacccaatcaaaa 33420329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 24207737 - 24207790
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  24207737 tacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaa 24207790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 38972915 - 38973030
Alignment:
Q  143 tttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaacccaaacccatacc 231  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||| |           ||||| ||||||||||||||| ||||||||||| ||||||    
T  38972915 tttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacc 38973014  T
Q  232 caaacccaatcaaaac 247  Q
     ||||||| |||||||    
T  38973015 taaacccagtcaaaac 38973030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 28569106 - 28569004
Alignment:
Q  154 tttgggtatgggttcggggtgggtacctatataccctttacccgt-----------gttttgaaatcggggaaaacccaaacccatacccaaacccaatc 242  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||            |||||||||||||||||| |||||| |||||||||||||| ||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  243 aaa 245  Q
    |||    
T  28569006 aaa 28569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 39422352 - 39422452
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacct-atatacccttt-----acccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaa 244  Q
    |||||||||||| ||||| |||||||||||| |||| ||| ||     |||||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  39422352 gggtttgggtataggttcagggtgggtaccttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaa 39422451  T
Q  245 a 245  Q
    |    
T  39422452 a 39422452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 33728037 - 33727982
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||    
T  33728037 tacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaac 33727982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 23045027 - 23044974
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| || |||||    
T  23045027 tacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaa 23044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 7350520 - 7350436
Alignment:
Q  126 taaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcg 210  Q
    |||| ||||||||||| |||| || ||||||  ||||||||||||||||| | ||||||| ||| |||||||||| || ||||||    
T  7350520 taaattaattttctacatttgagacgggtttaagtatgggttcggggtggatgcctatatccccattacccgtgtcttaaaatcg 7350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 40187692 - 40187640
Alignment:
Q  193 acccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||||||||||| ||||||||||||||| |||  ||||||||| |||||    
T  40187692 acccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaa 40187640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 15890259 - 15890314
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||||| ||||||||| || |||| ||||||| | |||||||    
T  15890259 tacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaac 15890314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 6810156 - 6810206
Alignment:
Q  148 gatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||| |||| ||||| | | ||||||||    
T  6810156 gatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgt 6810206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 12915537 - 12915579
Alignment:
Q  203 tgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||||| ||||||||||||||||||||| |||| |||||    
T  12915537 tgaaatcgggaaaaacccaaacccatacccaaccccagtcaaa 12915579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 15564576 - 15564682
Alignment:
Q  90 gacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    ||||||| ||||| ||||||||||||||||| ||  |||| ||||||||||| || | || | ||||| ||||| ||||||| ||  |||  ||||||||    
T  15564576 gacaattttcaaaaaaaataacatgacatatcaatgtaaagtaattttctacattcgggacgagtttgagtatgagttcgggatgaatacagatataccc 15564675  T
Q  190 tttaccc 196  Q
     ||||||    
T  15564676 gttaccc 15564682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 32574969 - 32574927
Alignment:
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    |||||||||||||||||||||||||||||  | ||||||||||    
T  32574969 gtgttttgaaatcggggaaaacccaaacctgtccccaaaccca 32574927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 2681277 - 2681322
Alignment:
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||||||| ||| ||||||| || |||||    
T  2681277 ttttgaaatcggggaaaacccaaactcatgcccaaactcagtcaaa 2681322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 16311325 - 16311276
Alignment:
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||  ||||| ||||| |||| |||||||||||||||    
T  16311325 cgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaa 16311276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 20634067 - 20634128
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||    
T  20634067 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatat 20634128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 20650181 - 20650242
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||    
T  20650181 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatat 20650242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 27900437 - 27900388
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaat 241  Q
    ||||| ||||||||||||||| ||||| |||||| ||| |||||||||||    
T  27900437 tacccatgttttgaaatcgggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 34259147 - 34259208
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||    
T  34259147 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatat 34259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 35584171 - 35584207
Alignment:
Q  194 cccgtgttttgaaatcggggaaaacccaaacccatac 230  Q
    |||||||||||||| |||||||||||||||| |||||    
T  35584171 cccgtgttttgaaaacggggaaaacccaaactcatac 35584207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 34673501 - 34673270
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||    
T  34673501 ctcattttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcat 34673402  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaa 207  Q
    || ||| |||| || |||||| |||| |  |  |||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||    
T  34673401 atcaacataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaa 34673302  T
Q  208 tcggggaaaacccaaacccatacccaaaccca 239  Q
    | ||| ||||||||||||||||||||||||||    
T  34673301 ttgggaaaaacccaaacccatacccaaaccca 34673270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 29871510 - 29871276
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||| |  ||||||||||||||||||||    
T  29871510 aatatgctcattttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagtttttataacatgggaattatcaaacaaaataaca 29871411  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgtt 201  Q
    |||||||| ||| |||||||||||||||| || | || ||||||||||||| |||| ||||||||||||||||||           ||  ||||| ||||    
T  29871410 tgacatatcaacataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgtt 29871311  T
Q  202 ttgaaatcggggaaaacccaaacccatacccaaac 236  Q
    |||||||||| |||||||||||| |||||||||||    
T  29871310 ttgaaatcggagaaaacccaaactcatacccaaac 29871276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 9983115 - 9982870
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||||||||||||||||||||| |||||||| || |||| ||||||||||||||| || |||||| || ||||||||||||||||||||    
T  9983115 aatatgctcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagttttgataacatgagaattatcaaacaaaataaca 9983016  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacccttta-----------cccgtgtt 201  Q
    ||| |||| ||| |||| ||||||||| | || | |||||||||||||||||||||||||||||||||||||||| | |||           ||||||||    
T  9983015 tgatatattaacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgtt 9982916  T
Q  202 ttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| ||||||||  ||||| |||||||||||||| |||||||    
T  9982915 ttgaaattggggaaaattcaaactcatacccaaacccagtcaaaac 9982870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 246
Target Start/End: Complemental strand, 45866417 - 45866166
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| || |||||||||||||    
T  45866417 tccaacaatatgttcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45866318  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||||||||||||| ||| |||| ||||||| ||| |||| ||||||| |||||||| ||| ||||||||||||||||||| | |           |||    
T  45866317 aataacatgacatatcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatac 45866218  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  45866217 ccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaaa 45866166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 12494868 - 12495117
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||  |||||||| || |||||||||||| ||||||| ||||||||||| ||||||| |||||||    
T  12494868 tccaacaatatgttcactttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagtttttataacacgccaattataaaacaaa 12494967  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac-----------c 195  Q
    |||||||| ||| | ||| || | || |||||||| |||| || ||||||||||||||||||| ||||||||||||||||||| ||||           |    
T  12494968 ataacatgtcatgtcaacatatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatc 12495067  T
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||| |||||    
T  12495068 cgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaa 12495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 49741238 - 49741014
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||| ||||||| |||||||| || |||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  49741238 tccaacaatatgttcactttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 49741139  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt----tacccgtgttt 202  Q
    ||||||| |||||| ||| |||| || |||||| | || | || ||||||||||||||||||||||||||||||||||||||| |    || || |||||    
T  49741138 ataacataacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcccatatccatgttt 49741039  T
Q  203 tgaaatcggggaaaacccaaaccca 227  Q
    |||||| |||||||||| |||||||    
T  49741038 tgaaattggggaaaacctaaaccca 49741014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 36187440 - 36187200
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |  ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  36187440 ctcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 36187341  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||| ||| ||| |||| || |||||||||||||||||| |||||||||||||||||||| |           ||||||||||||||     
T  36187340 tatcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 36187241  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  36187240 atcggggaaaacccatacccatacccaaacccagtcaaaac 36187200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 24236972 - 24236741
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  24236972 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 24236873  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaa 215  Q
    ||||||||||| ||| |||| || ||||||| ||||||||||||||||||||||||||||||| |           |||||||||||||| |||||||||    
T  24236872 aaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaa 24236773  T
Q  216 aacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| ||||||||| ||||||| |||||||    
T  24236772 aacccatacccatacctaaacccagtcaaaac 24236741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 44615707 - 44615455
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||||| || ||||||||||||||  |||| |||||||||||||||||||||||||||    
T  44615707 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44615608  T
Q  107 ataacatgacatataaacctaaaataattttctacg-tttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttac 194  Q
    |||||||| ||||| ||  |||| || |||| |  | |||| || ||||||||||||| ||| |||||||||||||||||||           ||  |||    
T  44615607 ataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatac 44615508  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  44615507 ccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaac 44615455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 44792862 - 44793114
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||||| || ||||||||||||||  |||| |||||||||||||||||||||||||||    
T  44792862 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44792961  T
Q  107 ataacatgacatataaacctaaaataattttctacg-tttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttac 194  Q
    |||||||| ||||| ||  |||| || |||| |  | |||| || ||||||||||||| ||| |||||||||||||||||||           ||  |||    
T  44792962 ataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatac 44793061  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  44793062 ccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaac 44793114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 17134821 - 17135056
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    |||||||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |    
T  17134821 tttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatca 17134920  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcgg 211  Q
    || |||| ||||||| ||| | || || | || |||||||||||||||||  ||||||||||||||| |           ||||||||||||||||||||    
T  17134921 acataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcgg 17135020  T
Q  212 ggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||| ||||| ||||||||||| |||||||    
T  17135021 ggaaaacccatacccacacccaaacccagtcaaaac 17135056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 247
Target Start/End: Original strand, 2514668 - 2514867
Alignment:
Q  50 tagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatata-aacctaaaataattttctacgtttgtg 148  Q
    |||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |  ||| |||||||||||| | | || | |    
T  2514668 tagttactactttaaatatcaatggtagtttttattacacggcaattatcaaacaaaataacatgacatgttcaacataaaataattttatgcattcggg 2514767  T
Q  149 atgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccata-cccaaacccaatcaaaac 247  Q
    |  | ||| ||||||  |||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  2514768 acagatttaggtatgtattcggggtggatatctatatgccctttacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaac 2514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 19572737 - 19572493
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  | ||||||| ||   || || ||||||||||||||| |||| ||||| | ||||||||||||||||||||    
T  19572737 aatatgctcactttaacatttgttagacgtaatgatttaatt-gatccttcaatatcaatggtagtttttattaacatggcaattatcaaacaaaataac 19572639  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgt 200  Q
    ||||||||| ||| |||||||||||| ||| |||| || |||| || ||||||||||||||||||||||||||||||| |           |||||||||    
T  19572638 atgacatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgt 19572539  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||    
T  19572538 tttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaa 19572493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 16433386 - 16433207
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||| |||||||||||| |||||||||||| || |||||||||||||||||||| ||||||| ||   ||||||||||||||||||||    
T  16433386 aatatgctcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttataatac---aattatcaaacaaaataaca 16433290  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||| |||| ||||||||| | |||| | |||||||||||||||||||||   ||||||||||||| || ||||||||    
T  16433289 tgacatatcaacataaagtaattttctgcatttggggtgggtttgggtatgggttcgg---gggtacctatatatccgttacccgt 16433207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 29936285 - 29936465
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| |||    
T  29936285 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacattaca 29936384  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29936385 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 29936465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 40087695 - 40087507
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  40087695 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 40087596  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac 194  Q
    |||||||||| |||| ||| |||| ||||||| ||| |||| || |||| || ||||| ||||||||||||||||||||| ||| ||||    
T  40087595 aataacatgatatatcaacataaagtaattttttacatttgggacgggtatgagtatgagttcggggtgggtacctatattcccgttac 40087507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 42439890 - 42439714
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||    
T  42439890 ctcactttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 42439791  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac 194  Q
    ||| ||| |||| ||||||| ||| |||| |||| |||||| |||||||||||||||||||||||||||||| ||||    
T  42439790 tatcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttac 42439714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 18354312 - 18354060
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||| ||||| || ||||||||||  |  ||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  18354312 tccaacaatatgttcactttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 18354213  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-------- 197  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || | || ||||||| ||||||||||||| || ||||||||| |||||||            
T  18354212 aataacatgacatatcaacataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatac 18354113  T
Q  198 ---tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
       |||||||||||||||||||||||| |||||||  |||| ||| |||||||    
T  18354112 ccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaac 18354060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 28297802 - 28297983
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  28297802 ctcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 28297901  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| ||||||| |||| | || |||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28297902 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgt 28297983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 23966729 - 23966919
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||  || ||||||||||  | |||||||||||||| ||||| ||||| |||| ||||||||||||||||    
T  23966729 tccaacaatatgctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagtagtttttataaacatgacaattatcaaacaa 23966828  T
Q  106 aataacatgacatataaacctaaaataa-ttttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    |||||||| |||||| ||| |||| ||| |||| ||| |||| || |||| || ||||||||||||||||||||||||||||||| |||||    
T  23966829 aataacataacatatcaacataaagtaatttttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacc 23966919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 35937042 - 35936896
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  35937042 aatatgctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttgtaacacggaaattatcaaacaaaataaca 35936943  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttggg 159  Q
    |||||||| ||| |||| ||||||||||| ||  ||| |||||||||    
T  35936942 tgacatatcaacataaagtaattttctacattcatgacgggtttggg 35936896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 13390354 - 13390506
Alignment:
Q  90 gacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| || |||| |||||||| |||||||||||||||||||||||||    
T  13390354 gacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgagttcggggtgggtacctatataccc 13390453  T
Q  190 tttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     |     |||||||||||||||||||||  || ||||||||||||||||| |||||||    
T  13390454 gt-----gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaac 13390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 51421727 - 51421966
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | ||||||||| |||||||||| ||||| |||| | |||||||||||||||||||||| |||    
T  51421727 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaataacataaca 51421826  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| || | ||||||| ||| |||| || ||||||||||||||||||||||||||||| |||||||           ||  ||||||||||||||     
T  51421827 tatcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgag 51421926  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||| |||||||| ||||||||||||||||| ||||||    
T  51421927 atcgggaaaaacccatacccatacccaaacccagtcaaaa 51421966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 246
Target Start/End: Original strand, 5180902 - 5181147
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||| |||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  5180902 tccaacaatatgctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 5181001  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||||||||||||| ||| |||||||||||| ||| |||      ||   ||||||||||| ||||||||| ||||||||||| |           |||    
T  5181002 aataacatgacatatcaacataaaataattttttacattt------ggaacgggtatgggtttggggtgggtgcctatatacccgttacccgtcccatac 5181095  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  5181096 ccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaa 5181147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 16408823 - 16409051
Alignment:
Q  27 aacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaataacatgacatataaacc 125  Q
    |||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    ||     
T  16408823 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat----aca 16408918  T
Q  126 taaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaaatcgggga 214  Q
    |||| ||||||| ||| ||||    |||||| | |||||||||||||| |||||||||||||           ||  ||||||||||||||||| |||||    
T  16408919 taaagtaattttttacatttggagcgggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattgggga 16409018  T
Q  215 aaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| ||||||||||||||||| |||||||    
T  16409019 aaacccatacccatacccaaacccagtcaaaac 16409051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 17092191 - 17092003
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| |||||||||| |||||  || ||||||||||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  17092191 tccaacaatatgttcactttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 17092092  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttac 194  Q
    ||||||||||||||| ||| |||| ||||||| ||| |||| || |||| |||| |||||||||||||| || ||||||||||| ||||    
T  17092091 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggcatgggttcggggtgagtgcctatatacccgttac 17092003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 50426887 - 50426648
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||||||| |||| || ||||||||||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||    
T  50426887 tccaacaatatgctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 50426788  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    ||||||||||||||| ||| |||| ||| ||| ||| |||| ||       ||||||||||||||||||||||||||||||||| |           |||    
T  50426787 aataacatgacatatcaacataaagtaaatttttacatttggga------cgggtatgggttcggggtgggtacctatatacccgttatccgtctcatac 50426694  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 240  Q
    ||||||||||||||| |||||| |||| ||||| ||||||||||||    
T  50426693 ccgtgttttgaaatcagggaaagcccatacccaaacccaaacccaa 50426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 42708062 - 42707908
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||| |||||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  42708062 tccaacaatatgctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42707963  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggt 160  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || |||| |||||    
T  42707962 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggt 42707908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 49250993 - 49250753
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  |  |||||||||||||| |||| ||||| |||| |||||||||||||||||||| ||| |||    
T  49250993 ctcactttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaaaatagcataaca 49250894  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||| |||| || ||||||||||||||||||| ||||| ||||||||||||| |           ||||||||||||||     
T  49250893 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgag 49250794  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  49250793 atcggggaaaactcatacccatacccaaacccagtcaaaac 49250753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 34610942 - 34611182
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  |  ||||||||||||||||||| ||||| |||| ||||||||||||||||||||| || |||    
T  34610942 ctcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataaca 34611041  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| |||| || | || ||| |||| || |||||||||||||||||||||||| ||||||||||||           ||  ||||||||||||||     
T  34611042 tatcaacataaagtagtattttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgag 34611141  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| |||||||| |||||||||||||  ||||||||||    
T  34611142 atcgggaaaaacccatacccatacccaaattcaatcaaaac 34611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 3628219 - 3628025
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||||||||||||  | ||||||||||  | | |||||||| ||||||||| ||||| |||| || |||||||||||||    
T  3628219 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaa 3628120  T
Q  106 aataacatgacatataaacctaaaataa--ttttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||| ||| |||| |||  |||| ||| |||| ||  ||  || |||||||||||||||||||||||| |||||| ||||||||    
T  3628119 aataacatgacatatcaacataaagtaattttttttacatttgggactggaatgagtatgggttcggggtgggtacctacatacccgttacccgt 3628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 23490919 - 23490751
Alignment:
Q  90 gacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    |||||||||||||||||||||||| ||||||  || |||| || |||| ||| |||| || |||||| ||||||||||||||||||||||||||||||||    
T  23490919 gacaattatcaaacaaaataacataacatatccacataaattagttttttacatttgggacgggttttggtatgggttcggggtgggtacctatataccc 23490820  T
Q  190 tt-----------tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     |           ||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  23490819 gttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaac 23490751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 44632350 - 44632254
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||| |||||    
T  44632350 tttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagtttttataacacgacaattgtcaaacaaaataatatggcatat 44632254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 34060251 - 34060121
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | ||||||||||||||||| || |||| ||||| ||||||||||||||||    
T  34060251 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatgacaattatcaaacaa 34060152  T
Q  106 aataacatgacatataaacctaaaataatttt 137  Q
    |||||||| |||||| ||| |||| |||||||    
T  34060151 aataacat-acatatcaacataaagtaatttt 34060121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 24710727 - 24710875
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||||||| |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |      
T  24710727 ctcattttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatg 24710826  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggt 166  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||| ||||||||    
T  24710827 tatcaacataaagtaattttttacatttgggacgggtttgagtatgggt 24710875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 39616160 - 39616320
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| |||||||| |||||||| || |||||||  |  |  ||||||||||||||||| | ||||| |||| || ||||| |||||||    
T  39616160 tccaacaatatgctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatgataattagcaaacaa 39616259  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggt 166  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || |||| |||||||||||    
T  39616260 aataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgggt 39616320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 33293566 - 33293511
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  33293566 tacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaac 33293511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 13020562 - 13020648
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaaaata 109  Q
    ||||| ||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  13020562 tttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 23968633 - 23968687
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23968633 tacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaa 23968687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 20774501 - 20774649
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | ||||||||||||||   ||| ||||| |||| |||||||||||||||||||||||| |||    
T  20774501 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgacaattatcaaacaaaataacataaca 20774600  T
Q  118 tataaacctaaaata-attttctacgtttgtgatgggtttgggtatggg 165  Q
    ||| ||| |||| ||  |||| ||| |||| || |||||||||||||||    
T  20774601 tatcaacataaagtagtttttttacatttgggacgggtttgggtatggg 20774649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 13798292 - 13798339
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  13798292 tacccgtgttttgaaatcgggaaaaacccaaactcatacccaaaccca 13798339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 23058468 - 23058573
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgt-----------tttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |           ||||||||||| |||||| ||||||||||| ||||||||    
T  23058468 gggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaaccca 23058567  T
Q  240 atcaaa 245  Q
     |||||    
T  23058568 gtcaaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 13020651 - 13020699
Alignment:
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaa 244  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  13020651 cgtgttttgaaatcggggaaaacccatacccataaccaaacccagtcaa 13020699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 24710901 - 24710956
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||| ||||||||||||||| || |||| ||||||||| |||||||    
T  24710901 tacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaac 24710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 39616346 - 39616401
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||| |||||||||||| || ||||||||||| || |||||||    
T  39616346 tacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaac 39616401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 42707872 - 42707818
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||||||||||| |||||| || || |||||||||||||| ||||||    
T  42707872 tacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaaa 42707818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 10778602 - 10778549
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||| |||||  |||| |||||||||||||| |||||    
T  10778602 tacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaa 10778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 19003701 - 19003656
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacc 237  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  19003701 tacccgtattttgtaatcggggaaaacccgaacccatacccaaacc 19003656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 35936855 - 35936810
Alignment:
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||    
T  35936855 tttgaaatcggggaaaacccaaactcatacccaaaccaagtcaaaa 35936810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 38733898 - 38733955
Alignment:
Q  56 cttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacat 113  Q
    ||||||||||||||||||  | | ||||||||| |||||||||||||| |||||||||    
T  38733898 cttctttaaatatcaatgacaatttttataacatgacaattatcaaaccaaataacat 38733955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 16903525 - 16903569
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16903525 gggtttgggtatgagttcggggtgggtacctatatccccattacc 16903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 16237340 - 16237286
Alignment:
Q  191 ttacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||| ||||||||||||||||||||||||  |||| |||||| || |||||    
T  16237340 ttacccgtattttgaaatcggggaaaacccaaattcatatccaaactcagtcaaa 16237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 39219312 - 39219346
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccc 226  Q
    |||||||||||| ||||||||||||||||||||||    
T  39219312 tacccgtgttttaaaatcggggaaaacccaaaccc 39219346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 2514512 - 2514549
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgattt 50  Q
    ||||| || |||||||||||||||||||||||||||||    
T  2514512 aatatgcttattttaacatttgttagaccgattgattt 2514549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 34085293 - 34085342
Alignment:
Q  196 cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||| ||||||||||| |||| || |||||| |||||    
T  34085293 cgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaaa 34085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 35069924 - 35069871
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| || |||||||||||||||| ||||| |||||||||| ||| |||||    
T  35069924 tacccgtattatgaaatcggggaaaactcaaactcatacccaaatccagtcaaa 35069871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 48125768 - 48125723
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||| ||||||||| | | ||||||||    
T  48125768 gtttgggtatgggttcggggtggatacctatatcctcgttacccgt 48125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 19892978 - 19893014
Alignment:
Q  149 atgggtttgggtatgggttcggggtgggtacctatat 185  Q
    |||||| |||||||||||||||||||||||| |||||    
T  19892978 atgggtatgggtatgggttcggggtgggtacatatat 19893014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 36616796 - 36616856
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacata 119  Q
    ||||||||||||| |  | | ||||||||  |||||||||||||| |||||||||||||||    
T  36616796 ctttaaatatcaacgacaatttttataacttgacaattatcaaaccaaataacatgacata 36616856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 48312726 - 48312686
Alignment:
Q  205 aaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||| ||| ||||||| |||||||||    
T  48312726 aaatcggggaaaacccaaatccaaacccaaatccaatcaaa 48312686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 27932281 - 27932521
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||||||||||  | ||||||| ||  | ||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||    
T  27932281 ctcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgaca 27932380  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| ||| |||| || || | || ||||||||||||||||||||||||||||||| |           |||||||||||||||    
T  27932381 tatcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaa 27932480  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  27932481 atcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 20399460 - 20399700
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattat-caaacaaaataacatgaca 117  Q
    |||| ||||||||||||||||||||||||||| |||  | ||||||||||||||| |||| |||||||||||||||||||  ||| |||||||||||  |    
T  20399460 ctcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagtttttataacacgacaattatataaaaaaaataacatggta 20399559  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||||||||||| | | || | || ||||||||| |||||||||||||||||| |||||||||| |           |||||||||||||||    
T  20399560 tatcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaa 20399659  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  20399660 atcggagaaaacccaaacccatacccaaacccagtcaaaac 20399700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 24870249 - 24870064
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    |||| ||||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||  ||||| ||||||||||||||||| |||||    
T  24870249 aatacactcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagttttattaacatgacaattatcaaacaaattaaca 24870150  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||| |||| ||||||| ||| |||| || |||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  24870149 tgacatatcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgt 24870064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 1012474 - 1012726
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||||||  |||||||||||||||    
T  1012474 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtactttttataacacagcaattatcaaacaaa 1012573  T
Q  107 ataacatgacatataaacctaaaata--attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg------- 197  Q
    |||||||| ||||| ||| |||| ||   |||| | | || | || | ||||||||||||||||||||||||||||||||||||| |||||||           
T  1012574 ataacatggcatatcaacataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccata 1012673  T
Q  198 ----tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
        |||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  1012674 ctcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaatcaaaac 1012726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 17469112 - 17469343
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| ||||| |||| ||||||| |||||||||||| || |||||||||||||||||||  ||||||||| | |||||||||||||||    
T  17469112 tccaacaatatgttcactttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagcttttataacaaggcaattatcaaacaaa 17469211  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacc 195  Q
    |||||||| ||||| ||| |||| || |||||| |  ||| || ||||||||||||||||| ||||||||||||||||||||| |           ||||    
T  17469212 ataacatggcatatcaacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 17469311  T
Q  196 cgtgttttgaaatcggggaaaacccaaaccca 227  Q
    ||||||||||||||||||||||||||||||||    
T  17469312 cgtgttttgaaatcggggaaaacccaaaccca 17469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 29109048 - 29108802
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  | ||||||| ||  | ||| |||||||||||||||| ||||| |||| |||||||||||||||||||||     
T  29109048 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataat 29108949  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccg-----------tgt 200  Q
    ||||||||| ||| |||| ||||||| ||| |||| || |||| |||||||||||||||||||||||| ||||||||| |||||||           |||    
T  29108948 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgt 29108849  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||| |||||||| |||||||| ||||||||||||||||| |||||||    
T  29108848 tttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaac 29108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 45235921 - 45236113
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| ||||| |||| || |||||||||||||    
T  45235921 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45236020  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| || |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  45236021 aataacataacatatcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgt 45236113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 32302928 - 32303169
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  32302928 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 32303027  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    ||| ||| ||||||| |||| | || |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||| ||    
T  32303028 tatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 32303127  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||||| ||||||||||||||||| |||||||    
T  32303128 gatcggggaaaacccatacccatacccaaacccagtcaaaac 32303169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 34139304 - 34139554
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34139304 tccaacaatatgttcactttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 34139403  T
Q  107 ataacatgacatataaacctaaaataa-ttttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttac 194  Q
    ||||||||   ||| ||| |||| ||| |||| | | || | || |||||||||||| ||||||||||||||||||||||||           ||| ||     
T  34139404 ataacatggtctatcaacataaagtaatttttttgcattcgggacgggtttgggtat-ggttcggggtgggtacctatatacctgttacatgtcctatat 34139502  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| |||||||    
T  34139503 ccgtgtttttaaatcggggaaaa-ccaaacacatacccaaacccagtcaaaac 34139554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 43113849 - 43113666
Alignment:
Q  15 tatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatg 114  Q
    |||| ||| |||||||||||||| |||||||||||||||| || ||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||     
T  43113849 tatattcactttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttataacacgacaattatctaacaaaataacata 43113750  T
Q  115 acatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||| ||| | || || |||||| | || | || || |||||||||| ||||||||||||||||||||||||  ||||||||    
T  43113749 acatatcaacatgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgt 43113666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 1063380 - 1063607
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||||| || ||||||||||  |  ||||||||||||||||| | ||||| |||| ||||||||||||||||||||||| ||||||| |    
T  1063380 tttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatgacaattatcaaacaaaataacaagacatatca 1063479  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcgg 211  Q
    || |||| ||||||| |||  ||| ||||| |||||||||| ||||||||||||||| ||||||||| |           ||||||||||||||||||||    
T  1063480 acataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgg 1063579  T
Q  212 ggaaaacccaaacccatacccaaaccca 239  Q
    | |||||||| ||||||||||| |||||    
T  1063580 gaaaaacccatacccatacccacaccca 1063607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 36132141 - 36131959
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||||||||||||||||| |||||||| ||||| || ||||||||||| | ||||||| | ||||||||||| |||||||||||||||||||||    
T  36132141 aatatgctcattttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaatttttataacacggcaattatcaaacaaaataaca 36132042  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc 196  Q
    |||||||| ||| |||||||| ||||| | || | || || |||| ||||| ||||||||||| ||||| ||| ||||||||||    
T  36132041 tgacatat-aacataaaataactttctgcattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttaccc 36131959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 24568796 - 24568977
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  24568796 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 24568895  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccc 189  Q
    ||||| |||||||| ||| |||| || |||||| | || | || || |||| ||||||||||||||||| |||||||||||||    
T  24568896 ataac-tgacatatcaacataaagtagttttctccattcgggacggatttgagtatgggttcggggtggatacctatataccc 24568977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 24927826 - 24928057
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| || | |||||||||||||||||||||||| ||||||  || |    
T  24927826 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacatatccacat 24927925  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaa 215  Q
    ||| || |||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||| || ||| |||||    
T  24927926 aaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaa 24928025  T
Q  216 aacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||| ||||||||||||||||| |||||||    
T  24928026 aacccatacccatacccaaacccagtcaaaac 24928057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 34776945 - 34777104
Alignment:
Q  30 atttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaa 128  Q
    |||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| ||||   |||||||||||||||||||||| |||||| ||| |||    
T  34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
Q  129 aataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacc 188  Q
    ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  34777045 aataattttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacc 34777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 14186205 - 14186366
Alignment:
Q  31 tttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaacctaaaa 130  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| |    ||||||||  |||||||||||||||||||| ||||| ||| ||||     
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagttt----aacacgactgttatcaaacaaaataacatggcatattaacataaat 14186300  T
Q  131 taattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc 196  Q
    ||||||||||| ||   || |||||||||||||||||| ||||| ||||||||||| || ||||||    
T  14186301 taattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttaccc 14186366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 35215378 - 35215476
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  35215378 tttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagtttttataacacgacaattatcaaacaaaataacatggcatataa 35215476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 17220579 - 17220819
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||  | ||||||| ||  | ||| |||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  17220579 aatatgctcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 17220678  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgt 200  Q
    ||||||||| ||| |||| |||| || ||| |||| || |||| ||     |||||||||||||||||||||||| || |           |||||||||    
T  17220679 atgacatatcaacataaagtaatcttttacatttgggacgggtatg-----gggttcggggtgggtacctatataaccatcatccatcccatacccgtgt 17220773  T
Q  201 tttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||||||||||| ||| |||||||||||||| || ||||||    
T  17220774 tttgaaatcggggaaaatccatacccatacccaaactcagtcaaaa 17220819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 39445799 - 39445556
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||| ||  | | |||||||||||||||||| ||||| |||| ||||||||||||||||    
T  39445799 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcaatggtagtttttattaacatgacaattatcaaacaa 39445701  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||||||||||  ||        ||||| ||| |||| || |||| |||||||| |||||||||||||||||||| |||| |           |||    
T  39445700 aataacatgacatatctac--------attttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatac 39445609  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||| |||||||| ||||||||||||||| | |||||||    
T  39445608 ccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaac 39445556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 2076054 - 2075907
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  2076054 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 2075955  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatggg 165  Q
    ||| ||| |||| ||||||| ||| |||| || |||||||||||||||    
T  2075954 tatcaacataaagtaattttttacatttgggacgggtttgggtatggg 2075907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 4230939 - 4230791
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |      
T  4230939 ctcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatg 4230840  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggt 166  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||||||    
T  4230839 tatcaacataaagtaattttttacatttgggacgggtttgggtatgggt 4230791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 11255236 - 11255058
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | ||||||||  |   |||||| ||||| || | ||||||||||||||||    
T  11255236 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatgac---ggtagtttttattaatatgacaattatcaaacaa 11255140  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacc 188  Q
    |||||||| |||||| |||  ||| ||||||| ||| |||| || |||| ||||||||||||||  |||||||||||||||||    
T  11255139 aataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacc 11255058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 28977293 - 28977185
Alignment:
Q  60 tttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgg 158  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||| || |||| ||| |||| || ||||||||    
T  28977293 tttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgg 28977194  T
Q  159 gtatgggtt 167  Q
    || ||||||    
T  28977193 gtgtgggtt 28977185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 247
Target Start/End: Complemental strand, 40248501 - 40248351
Alignment:
Q  108 taacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------taccc 196  Q
    ||||||||||||| ||| |||| ||||||| ||| |||| || || | |||||||||||||||| ||||||||||||||||| |           |||||    
T  40248501 taacatgacatatcaacataaagtaattttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcataccc 40248402  T
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||  | ||||||||||||||||| |||||||    
T  40248401 gtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaac 40248351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 34021341 - 34021441
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||   |||||||| ||| || |||||||||||||| ||||| ||||||  | |||||||||||||||||||||||    
T  34021341 aatatgctcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagtttttatataatgacaattatcaaacaaaataaca 34021440  T
Q  113 t 113  Q
    |    
T  34021441 t 34021441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 5858687 - 5858632
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  5858687 tacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaac 5858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 29089589 - 29089672
Alignment:
Q  30 atttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacat 113  Q
    |||||||||||| ||| |||||||| || ||||||||||||||| |||| || ||||||| | |||||||||||||||||||||    
T  29089589 atttgttagacccattaatttagttgctcctttaaatatcaatgatagttttaataacacaataattatcaaacaaaataacat 29089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 14687452 - 14687505
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14687452 tacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatcaaa 14687505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 40248579 - 40248502
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat 84  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||||    
T  40248579 tccaacaatattctcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagtttttat 40248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 6388551 - 6388496
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| || |||||||    
T  6388551 tacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaac 6388496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 14155585 - 14155632
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  14155585 tacccgtgttttgaaatcgggaaaaacccaaactcatacccaaaccca 14155632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 37960997 - 37960942
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| | |||||||    
T  37960997 tacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaac 37960942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 2075864 - 2075906
Alignment:
Q  156 tgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  2075864 tgggtatgggttcggggtgggtacctatatacccgttacccgt 2075906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 4230760 - 4230711
Alignment:
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  4230760 gtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaa 4230711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 15068623 - 15068570
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||||||||||| |||||||||||| ||||| |||||    
T  15068623 tacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaa 15068570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 2075869 - 2075814
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  2075869 tacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaac 2075814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 9642386 - 9642351
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  9642386 tacccgtgttttgaaatcggggaaaacccaaaccca 9642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 27777233 - 27777178
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||| |||||||||||||||| ||||| ||||| |||||||||||||| |||||||    
T  27777233 tacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaac 27777178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 15173915 - 15173862
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  15173915 tacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaa 15173862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 17084199 - 17084147
Alignment:
Q  146 gtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||| |||| |||||||||||||| |||||| ||| ||||||||    
T  17084199 gtgatgggtttggatatgagttcggggtgggtatctatatccccgttacccgt 17084147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 30481506 - 30481474
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatat 185  Q
    |||||||||||||||||||||||||||||||||    
T  30481506 gtttgggtatgggttcggggtgggtacctatat 30481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 9476120 - 9476073
Alignment:
Q  131 taattttctacgtttgtgatgggtttgggtatgggttcggggtgggta 178  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||||    
T  9476120 taattttctacattcgggatgggtttgggtatgggttcgaggtgggta 9476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 30481448 - 30481401
Alignment:
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||| || ||||||||||| ||||| ||||||||||||||||    
T  30481448 ttttgaaatcaggaaaaacccaaactcatactcaaacccaatcaaaac 30481401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 35215589 - 35215643
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||  |||||||    
T  35215589 tacccgtgttttgaaatc-gggaaaacccaaaatcatacccaaacccggtcaaaac 35215643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 43113659 - 43113608
Alignment:
Q  194 cccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||| ||||||||| | ||||| |||||||| |||||    
T  43113659 cccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaa 43113608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 45236118 - 45236173
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||| |||||||| || |||||||| ||||| || |||||||    
T  45236118 tacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaac 45236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 8545454 - 8545342
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggggaaaaccca 221  Q
    ||||||||| |||| || | ||||| |||||||||||||||||||| |||||| ||| |           |||||||||||||||||||| |||||||||    
T  8545454 attttctacatttgggacgagtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaaccca 8545355  T
Q  222 aacccatacccaa 234  Q
    |||  ||||||||    
T  8545354 aacttatacccaa 8545342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 27056581 - 27056543
Alignment:
Q  201 tttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  27056581 tttgaaatcgggaaaaacccaaacccataaccaaaccca 27056543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 2183641 - 2183588
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||||||||||| ||||| |||||| |||||| ||||||| |||||    
T  2183641 tacccgtattttgaaatcggagaaaatccaaactcatacctaaacccagtcaaa 2183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 4594337 - 4594276
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||    
T  4594337 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatat 4594276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 28345544 - 28345597
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||| ||||||| |||| ||||||| ||||| ||||||| |||||    
T  28345544 tacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagtcaaa 28345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 37961049 - 37961012
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatatacc 188  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  37961049 gggtttgggtatgagttcggggtgtgtacctatatacc 37961012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 5700337 - 5700401
Alignment:
Q  131 taattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    ||||||| ||| || | ||||| |||||||||||||||| |||||||| |||||| ||| |||||    
T  5700337 taattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttacc 5700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 27777283 - 27777255
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacct 181  Q
    |||||||||||||||||||||||||||||    
T  27777283 gtttgggtatgggttcggggtgggtacct 27777255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 28345494 - 28345526
Alignment:
Q  153 gtttgggtatgggttcggggtgggtacctatat 185  Q
    ||||||||||||||||||||||||| |||||||    
T  28345494 gtttgggtatgggttcggggtgggtgcctatat 28345526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 29918665 - 29918713
Alignment:
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||||||||||||||| ||||| ||||| |||||||||| ||| |||||    
T  29918665 gtgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaa 29918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 33267 - 33494
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||| ||| | ||    
T  33267 tttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagtttttataacacaacaattaccaaacaaaataacatggcatgtcaa 33366  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcggg 212  Q
    | |||| || |||||| | || | || | ||||||||||||||||||||||||||| ||||||||| |           |||||||||||||||||||||    
T  33367 cataaagtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggg 33466  T
Q  213 gaaaacccaaacccatacccaaacccaa 240  Q
    ||||||||||||||||||||||||||||    
T  33467 gaaaacccaaacccatacccaaacccaa 33494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 13705581 - 13705348
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||||||| || || ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  13705581 ctcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 13705482  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| |||||||  || |||| || |||||| |||||||||||||||||||||||||||||||| |           |||||||||||||||    
T  13705481 tatcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaa 13705382  T
Q  207 atcggggaaaacccaaacccatacccaaacccaa 240  Q
    |||||||||||| || ||||||||||| ||||||    
T  13705381 atcggggaaaactcatacccatacccatacccaa 13705348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 31942417 - 31942226
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||  ||| |||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  31942417 tccaacaatatgttcactttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 31942318  T
Q  107 ataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||| ||||| | | |||| || |||||| | |||||||  ||||||| |||||||| ||||||||||| ||||||||  ||||||||    
T  31942317 ataacatggcatatcagcataaagtagttttctgcatttgtgacaggtttggttatgggtttggggtgggtacttatatacctgttacccgt 31942226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 8916157 - 8915977
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||| | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  8916157 ctcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 8916058  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||||||||||| ||| |||| || ||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  8916057 tatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgt 8915977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 37999352 - 37999578
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  |||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  37999352 ctcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 37999451  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc-----------cgtgttttgaa 206  Q
    ||| ||| |||| ||||||| ||| |||| || ||||||||||||| ||||||||||||||| ||||||||| |||||           ||||||||||     
T  37999452 tatcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgag 37999551  T
Q  207 atcggggaaaacccaaacccataccca 233  Q
    ||||||||||||||| |||||||||||    
T  37999552 atcggggaaaacccatacccataccca 37999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 6028115 - 6027929
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtag-tgtttataacacgacaattatcaaacaaaataac 111  Q
    ||||| |||| |||||||||||||||||| |||||||||||| || ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  6028115 aatattctcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgacaattatcaaacaaaataac 6028016  T
Q  112 atgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| | ||| ||| ||||||| |||||| | ||   || |||| || ||||||||||||||||||||||||||||||  ||||||||    
T  6028015 atggcttatcaacataaaatacttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgt 6027929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 7314880 - 7314628
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| ||||| | || ||||||||||| ||||| || ||||||||||  | ||||||||||||||| |||| ||||| |||| || | |||||||||||    
T  7314880 tccaacaatatgcccactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgatatttatcaaacaa 7314781  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc---------- 195  Q
    ||||||||||||||| ||| |||||||||||| ||| |||| || |||| ||||||||||||||||||||| |||||||||||| |||||              
T  7314780 aataacatgacatatcaacataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatac 7314681  T
Q  196 -cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||| |||| ||||||||||||||||| ||||||| ||||||||| |||||||    
T  7314680 tcgtattttaaaatcggggaaaacccatacccatatccaaacccagtcaaaac 7314628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 24414352 - 24414112
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  |  ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  24414352 ctcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 24414253  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac-----------cctttacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||| |||| || |||||||||||||||||||||||||||||||||||||           ||  ||||||||||||||     
T  24414252 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgag 24414153  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  24414152 atcggggaaaaccgatacccatacccaaacccaatcaaaac 24414112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 14540649 - 14540827
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||| ||||||||||||| || |||||||||||    ||||| |||||||||||||||||||||||||||||||||    
T  14540649 aatatgctcactttaacatttgttagactgattgatttagttgctcctttaaatatc----gtagtttttataacacgacaattatcaaacaaaataaca 14540744  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc 195  Q
    |||||||| ||| |||| |||||||||||||| | || || |||| |||||| ||| | |||||| ||||||||||| |||||    
T  14540745 tgacatatcaacataaagtaattttctacgttcgggacggatttgagtatggattccgagtgggtgcctatatacccgttacc 14540827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 10920514 - 10920747
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |||    
T  10920514 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 10920613  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt----tacccgtgttttgaaatcgggg 213  Q
    ||| ||| |||| ||||||| ||| |||| || || |||||||||||||||||||||| |||||||||| || |    ||| |||||||||| |||||      
T  10920614 tatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtggatacctatatatccgtcccatactcgtgttttgagatcggaa 10920713  T
Q  214 aaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||| ||| ||||||||||||||||| |||||||    
T  10920714 aaaatccatacccatacccaaacccagtcaaaac 10920747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 13830605 - 13830843
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttata-acacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| |||||  ||| |||||||||||||||||||||||| |||    
T  13830605 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgacaattatcaaacaaaataacataaca 13830704  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt----------tacccgtgttttgaaa 207  Q
    ||| ||| |||| ||||||| ||| |||| ||  |||||| ||||||||||||||||||||| ||||||||| |          |||||||||||||| |    
T  13830705 tatcaacataaagtaattttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgttaccgtcccatacccgtgttttgaga 13830804  T
Q  208 tcggggaaaacccaaacccatacccaaacccaatcaaaa 246  Q
    ||| |||||||||| ||||||||||||||||| ||||||    
T  13830805 tcgaggaaaacccatacccatacccaaacccagtcaaaa 13830843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 19105066 - 19104817
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| ||||||||||||||||||||| ||||||||| ||  |||||||||| || ||||| ||||||||||| ||||||| |||||||||||||    
T  19105066 aatatgctcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagtttttataacacggcaattattaaacaaaataaca 19104967  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacccttta---------------cccg 197  Q
    |||||  | ||| |||| ||||||||| | || | || ||||||| |||||| |||| ||||| ||||||||||||| |||               ||||    
T  19104966 tgacacgtcaacataaagtaattttctgcattcgggacgggtttgagtatggattcgaggtggatacctatatacccgttacacatcccatacaggcccg 19104867  T
Q  198 tgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  19104866 tgtttggaaatcggggaaaacccaaactcatacccaaacccaatcaaaac 19104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 45256697 - 45256932
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataa 122  Q
    ||||||||||||||||| || ||||||||||  | |||||||||||||||||| | ||||| |||| ||||||||||||||||||||||| ||||||| |    
T  45256697 tttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataacaagacatatca 45256796  T
Q  123 acctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaaatcgg 211  Q
    |  |||| ||||||| ||| |||| || |||||| |||||||||||||||||||||| ||||||||| |           ||||||||||||||||||||    
T  45256797 aaataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcgg 45256896  T
Q  212 ggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||| || || |||| ||| ||||| |||||||    
T  45256897 ggaaaactcatactcatatccacacccagtcaaaac 45256932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 30846814 - 30847055
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  30846814 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 30846913  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttga 205  Q
    ||| ||| |||| || |||| | ||  ||| || ||||||||||||||||||||||||||||||||||||||| |           ||||||||||| ||    
T  30846914 tatcaacataaagtagtttttttacaattgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcga 30847013  T
Q  206 aatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     ||||||||||||||| ||||||||||||||||| |||||||    
T  30847014 gatcggggaaaacccatacccatacccaaacccagtcaaaac 30847055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 37106556 - 37106801
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  37106556 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37106655  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||| | |||| ||| |||| ||||||| ||| |||| ||       |||||||||||||| |||||||||||||||||| |           |||    
T  37106656 aataacat-atatatcaacataaagtaattttttacatttggga------cgggtatgggttcggagtgggtacctatatacccgttacccgtcccatac 37106748  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  37106749 ccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaac 37106801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 10208662 - 10208410
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||| ||||| ||| |||||||| ||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  10208662 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 10208563  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tac 194  Q
    |||||||| |||||| ||| |||| ||||||| ||| |||| ||  |||||| ||||||||||||||| |||||||||||| || |           |||    
T  10208562 aataacataacatattaacataaagtaattttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatac 10208463  T
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||| | || |||||||||||| ||||||||||||||||| |||||||    
T  10208462 ccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaac 10208410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 12194059 - 12193867
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || |||| |||||  | |||||||||||||||||||| ||||| |||| || |||||||||||||    
T  12194059 tccaacaatatgttcactttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 12193960  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||| ||| |||| ||||||| ||| |||| || |||| ||| ||||| |||| |||||||| |||||||||| ||||||||    
T  12193959 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgt 12193867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 9632255 - 9632495
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||| |||    
T  9632255 ctcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacataaca 9632354  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgttttgaa 206  Q
    ||| ||| |||| || |||| ||| |||| || ||||||||||||||||||||||||| ||||||||||||| |           ||||||||||| ||     
T  9632355 tatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgag 9632454  T
Q  207 atcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||| |||||||| |||||||| |||||||    
T  9632455 atcggggaaaacccatacccatactcaaacccattcaaaac 9632495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 42798209 - 42798028
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| ||| |||||||||||||  | ||||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||    
T  42798209 ctcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 42798110  T
Q  118 tataaacctaaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||| ||||||| | || |||| ||  |||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  42798109 tatcaacataaagtaatttttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgt 42798028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 45115427 - 45115607
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgaca 117  Q
    |||| |||||||||| ||||||  | ||||||| ||  | |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  45115427 ctcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgaca 45115526  T
Q  118 tataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||| ||| |||  ||||||| ||| |||| |||||||||   |||||||||||| ||||||||||||||||  ||||||||    
T  45115527 tatcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgt 45115607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 36128318 - 36128148
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | | ||||||||  | |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |    
T  36128318 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 36128219  T
Q  127 aaaataattttct-acgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc 196  Q
    ||| || |||| | || |||| || |||||||||||||||||||||||| |||||||||||||| ||||||    
T  36128218 aaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttaccc 36128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 16226958 - 16226848
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaa 106  Q
    ||||| |||||| ||| |||||||||| ||||||| |||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||| |||    
T  16226958 tccaacaatatattcactttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagtttttataacacgacaattatcaaataaa 16226859  T
Q  107 ataacatgaca 117  Q
    |||||||||||    
T  16226858 ataacatgaca 16226848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 44746341 - 44746089
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataac-acgacaattatcaaacaa 105  Q
    ||||| ||||| |||| | ||||||||||||||| || | ||||| || || ||||||||||||||| |||| |||||||| |  ||||| |||||| ||    
T  44746341 tccaacaatatgctcactctaacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataaccattacaatgatcaaataa 44746242  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacc---------- 195  Q
    ||||||||| ||||| ||  |||| | ||||||||| |||| || ||||||| ||||| ||| |  |||||||| ||||||||| |||||              
T  44746241 aataacatggcatatcaagataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatat 44746142  T
Q  196 -cgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
     |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  44746141 tcgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaac 44746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 37472961 - 37472854
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| ||||| |||| ||||||||||||||||| || ||||||||||  | |||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  37472961 tccaacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37472862  T
Q  106 aataacat 113  Q
    ||||||||    
T  37472861 aataacat 37472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 18106301 - 18106099
Alignment:
Q  28 acatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaaaataacatgacatataaacct 126  Q
    |||||||||||||  | ||||||| ||  | ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| |  ||| ||| |    
T  18106301 acatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgtatcaacat 18106202  T
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaaccc 226  Q
    ||||||||||| ||| ||||  |  |||| |||||           ||||||||||||       |||||||||||||| ||||||||||||||| ||||    
T  18106201 aaaataattttttacatttggaacaggttcgggta-----------tgggtacctata-------tacccgtgttttgagatcggggaaaacccataccc 18106120  T
Q  227 atacccaaacccaatcaaaac 247  Q
    ||| ||||||||| |||||||    
T  18106119 atatccaaacccagtcaaaac 18106099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 35248472 - 35248367
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttac-----------ccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||           |||||||||| ||||| ||||||||||||||| ||||||||| ||    
T  35248472 gggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactca 35248373  T
Q  240 atcaaa 245  Q
    ||||||    
T  35248372 atcaaa 35248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 37319812 - 37319862
Alignment:
Q  20 tcattttaacatttgttagaccgattgatttagttacttctttaaatatca 70  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  37319812 tcattttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 12341654 - 12341709
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  12341654 tacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaac 12341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 37472794 - 37472739
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||| |||||||    
T  37472794 tacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaac 37472739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 38342606 - 38342501
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttac-----------ccgtgttttgaaatcggggaaaacccaaacccatacccaaaccca 239  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||           |||| |||| |||||||||||||| |||||||||| |||||||||    
T  38342606 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaacccatatccaaaccca 38342507  T
Q  240 atcaaa 245  Q
    ||||||    
T  38342506 atcaaa 38342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 15546798 - 15546839
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccataccca 233  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15546798 tacccgtgttttgaaatcggggaaaacccaaacccatgccca 15546839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 22900848 - 22900889
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccataccca 233  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  22900848 tacccgtgttttgaaatcgggaaaaacccaaacccataccca 22900889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 10212463 - 10212515
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||    
T  10212463 ccgtgtttggaaatcggggaaaacccaaactcataccaaaacccagtcaaaac 10212515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 14331529 - 14331576
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    |||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  14331529 gggtttgggtatgggttcggagtgggtacatatatccccgttacccgt 14331576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 22900772 - 22900823
Alignment:
Q  127 aaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggta 178  Q
    ||||||||||| |||||||| || |||| |||||||| ||||||||||||||    
T  22900772 aaaataattttttacgtttgggacgggtatgggtatgagttcggggtgggta 22900823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 30978812 - 30978875
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataa 122  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||||    
T  30978812 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatataa 30978875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 35965388 - 35965423
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaaccca 227  Q
    ||||||||||||||||||||||||||| ||||||||    
T  35965388 tacccgtgttttgaaatcggggaaaactcaaaccca 35965423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 36128141 - 36128086
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||| || |||||||||| | || ||||||||||||||||| |||||||    
T  36128141 tacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtcaaaac 36128086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 13954802 - 13954852
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||| |||||    
T  13954802 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaa 13954852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 14096009 - 14096059
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||| |||||    
T  14096009 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaa 14096059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 18485651 - 18485697
Alignment:
Q  152 ggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||||||    
T  18485651 ggtttgggtatgggttcagggtgggtacatatatccccgttacccgt 18485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 35409197 - 35409167
Alignment:
Q  197 gtgttttgaaatcggggaaaacccaaaccca 227  Q
    |||||||||||||||||||||||||||||||    
T  35409197 gtgttttgaaatcggggaaaacccaaaccca 35409167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 45115612 - 45115669
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaaccc--aaacccatacccaaacccaatcaaaac 247  Q
    ||||||||||||||||||| ||||||| |  | ||||||||||||||||| |||||||    
T  45115612 tacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaac 45115669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 24051651 - 24051610
Alignment:
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaat 241  Q
    |||| ||||||| |||| ||||||||||||||||||||||||    
T  24051651 ttttaaaatcggagaaatcccaaacccatacccaaacccaat 24051610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 30978979 - 30979032
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||| ||||||||||| ||||  |||||||| |||||    
T  30978979 tacccgtattttgaaatcgggaaaaacccaaactcatattcaaacccagtcaaa 30979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 31942212 - 31942167
Alignment:
Q  200 ttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  31942212 ttttgaaatcgaggataacccaaacccatatccaaacccagtcaaa 31942167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 38342720 - 38342659
Alignment:
Q  59 ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||| ||||||||  |||  ||||| || |||||||||||||| ||||||||||||||||    
T  38342720 ctttaactatcaatgaaagttcttatatcatgacaattatcaaaccaaataacatgacatat 38342659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 43371607 - 43371660
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||| |||||||||||||| |||||| |||||||||| || |||||    
T  43371607 tacccgtattttaaaatcggggaaaactcaaaccaatacccaaactcagtcaaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 4427977 - 4428021
Alignment:
Q  191 ttacccgtgttttgaaatcggggaaaacccaaacccatacccaaa 235  Q
    |||||||| || |||| ||||||||||||||||||||||| ||||    
T  4427977 ttacccgtattatgaagtcggggaaaacccaaacccatactcaaa 4428021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 30696908 - 30696960
Alignment:
Q  133 attttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatat 185  Q
    ||||| ||| |||| ||| |||||||||||| ||||||||||||||| |||||    
T  30696908 attttttacatttgggataggtttgggtatgagttcggggtgggtacatatat 30696960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 35510473 - 35510433
Alignment:
Q  197 gtgttttgaaatcggggaaaacccaaacccatacccaaacc 237  Q
    |||||||||||| ||||||||||||||| | ||||||||||    
T  35510473 gtgttttgaaattggggaaaacccaaactcttacccaaacc 35510433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 42576667 - 42576695
Alignment:
Q  217 acccaaacccatacccaaacccaatcaaa 245  Q
    |||||||||||||||||||||||||||||    
T  42576667 acccaaacccatacccaaacccaatcaaa 42576695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 44057884 - 44057932
Alignment:
Q  151 gggtttgggtatgggttc-ggggtgggtacctatataccctttacccgt 198  Q
    |||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  44057884 gggtttgggtatgggttcgggggtgggtacatatatccccattacccgt 44057932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 14638 - 14871
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    ||||| |||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||| ||||| | |||||||||||||||||| |    
T  14638 aatatgctcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagtttttacaacacaataattatcaaacaaaataata 14737  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctttaccc-----------gtgtt 201  Q
    |  ||||| ||| | |||||||||||||| |||| || | ||||||||||| ||||  ||||||||||||||||||| ||| ||           |||||    
T  14738 tatcatatcaacattaaataattttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgtt 14837  T
Q  202 ttgaaatcggggaaaacccaaacccatacccaaa 235  Q
    |||||||||| |||||||||||| ||||||||||    
T  14838 ttgaaatcggagaaaacccaaactcatacccaaa 14871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 197546 - 197380
Alignment:
Q  19 ctcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacat 118  Q
    |||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| |  |||||||||||||||||||||| |||    
T  197546 ctcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagtttttataacaaggtaattatcaaacaaaataacatggcat 197447  T
Q  119 ataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatat 185  Q
    || ||| |||| ||||||||| | || | || |||||||||||| | |||||  |||||||||||||    
T  197446 atcaacataaagtaattttctgcattcgggacgggtttgggtatagattcggtttgggtacctatat 197380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 90460 - 90691
Alignment:
Q  13 aatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataaca 112  Q
    |||||||||| ||||| |||||||||||||||||||||| || || ||||||||||||||||| || || |||||||  ||||||| |||||||||||||    
T  90460 aatatactcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttgttttaataacacatcaattattaaacaaaataaca 90559  T
Q  113 tgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatataccctt-----------tacccgtgtt 201  Q
    || ||||| ||| |||||||||||||| | ||   || |  |||| |||||||||||||| ||||||| |||||||| |           ||||||||||    
T  90560 tggcatatcaacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgtt 90659  T
Q  202 ttgaaatcggggaaaacccaaacccataccca 233  Q
    |||||||||||||||||||| ||||| |||||    
T  90660 ttgaaatcggggaaaacccatacccaaaccca 90691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 36029 - 36128
Alignment:
Q  23 ttttaacatttgttagaccgattgatttagttactt--ctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatat 120  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  36029 ttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaacaaaataacatgacatat 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 6280 - 6426
Alignment:
Q  24 tttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaacaaaataacatgacatataaa 123  Q
    |||||||||||||||| |||||||||||||| || |||||||| ||||||||| | |||||| |||||||| ||||||||||||||||||| ||||| ||    
T  6280 tttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaatttttatagcacgacaactatcaaacaaaataacatggcatatcaa 6379  T
Q  124 cctaaaataattttctacgtttgtgatgggtttgggtatgggttcgg 170  Q
    | |||| ||| ||||| | |||| || |||||| ||| || ||||||    
T  6380 cataaagtaactttctgcatttgagacgggttttggtgtgagttcgg 6426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 4113 - 4275
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgttta-taacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||  || |||||||||| || ||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  4113 tccaacaatatgttcactttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 4212  T
Q  106 aataacatgacatataaacctaaaata-attttctacgtttgtgatgggtttgggtatgggtt 167  Q
    ||||||||||||||| ||| |||| ||  |||| ||| |||| || | |||||||||||||||    
T  4213 aataacatgacatatcaacataaagtattttttttacatttgggacgagtttgggtatgggtt 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 33440 - 33624
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaaa-ca- 104  Q
    ||||| |||||  ||| ||||| |||||||| ||||| ||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||| ||     
T  33440 tccaacaatatgttcactttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagtttttataacacgaaaattatcaaatcaa 33539  T
Q  105 --aaataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatac 187  Q
      |||||||||| ||||| | | |||| || |||||| | ||||||| |||||||| |||||||| |||||| | || |||||||    
T  33540 ataaataacatggcatatcatcataaagtagttttctgcatttgtgacgggtttggttatgggtttggggtgaggacttatatac 33624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 14859 - 14954
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgtgttttgaaatcggggaaaacccaaacccataccc-aaacccaatcaaa 245  Q
    ||||||||||||| |||| ||||||||||  |||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  14859 gggtttgggtatgagttcagggtgggtactaatatccccattacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaa 14954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 10157 - 10335
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttat-aacacgacaattatcaaacaa 105  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  | ||||||||  |   |||||| ||||| || | ||||||||||||||||    
T  10157 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatgac---ggtagtttttattaatatgacaattatcaaacaa 10253  T
Q  106 aataacatgacatataaacctaaaataattttctacgtttgtgatgggtttgggtatgggttcggggtgggtacctatatacc 188  Q
    |||||||| |||||| |||  ||| ||||||| ||| |||| || |||| ||||||||||||||  |||||||||||||||||    
T  10254 aataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacc 10335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 14376 - 14290
Alignment:
Q  7 tccaaaaatatactcattttaacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgaca 93  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||| ||||    
T  14376 tccaacaatatgttcactttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagtttttataacatgaca 14290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 14218 - 14164
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaaac 247  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||    
T  14218 tacccgtgtttt-aaatcggggaaaactcaaactcatacccaaacccaaacaaaac 14164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 3022 - 3075
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  3022 tacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtcaaa 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 211417 - 211470
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  211417 tacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 128208 - 128161
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  128208 gggtttgggtatgggttcggggtgggtacatatatccccattacccgt 128161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 105556 - 105509
Alignment:
Q  151 gggtttgggtatgggttcggggtgggtacctatataccctttacccgt 198  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||||||||    
T  105556 gggtttgggtatgggttcggggtgggtacatatatccctgttacccgt 105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 449768 - 449808
Alignment:
Q  205 aaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  449768 aaatcggggaaaacccaaacccaaacccaaacccagtcaaa 449808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 761 - 836
Alignment:
Q  26 taacatttgttagaccgattgatttagttacttctttaaatatcaatggtagtgtttataacacgacaattatcaa 101  Q
    |||||||| || || ||| |||||| ||| || |||||||||||||||||||  ||||||||| ||||| ||||||    
T  761 taacatttctttgatcgaatgatttggttgctactttaaatatcaatggtaggttttataacatgacaaatatcaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 67805 - 67855
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| |||| ||||||||||||| |||||||||||| |||||||| |||||    
T  67805 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaa 67855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 75648 - 75698
Alignment:
Q  195 ccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| |||| ||||||||||||| |||||||||||| |||||||| |||||    
T  75648 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaa 75698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 107426 - 107373
Alignment:
Q  192 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaatcaaa 245  Q
    |||| |||||||||||||| | ||||| |||||| ||||| |||||||||||||    
T  107426 tacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaa 107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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