View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0697_low_5 (Length: 609)

Name: NF0697_low_5
Description: NF0697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0697_low_5
NF0697_low_5
[»] chr3 (36 HSPs)
chr3 (57-340)||(42117634-42117920)
chr3 (341-609)||(41707060-41707331)
chr3 (341-609)||(8363960-8364231)
chr3 (340-609)||(46791702-46791974)
chr3 (341-609)||(23067730-23068001)
chr3 (338-609)||(29387759-29388033)
chr3 (341-609)||(51939561-51939831)
chr3 (342-609)||(28132740-28133010)
chr3 (341-609)||(52655128-52655399)
chr3 (341-609)||(21784789-21785059)
chr3 (347-609)||(18407986-18408250)
chr3 (340-609)||(24252406-24252679)
chr3 (341-609)||(27729774-27730043)
chr3 (341-540)||(27110882-27111082)
chr3 (348-609)||(23164577-23164839)
chr3 (347-560)||(6715245-6715458)
chr3 (411-605)||(54430412-54430607)
chr3 (351-478)||(51064299-51064426)
chr3 (411-609)||(25599091-25599291)
chr3 (402-609)||(13401311-13401518)
chr3 (341-609)||(48627034-48627288)
chr3 (413-593)||(40152152-40152332)
chr3 (472-609)||(7766983-7767122)
chr3 (498-609)||(21596282-21596394)
chr3 (500-609)||(42009267-42009377)
chr3 (553-609)||(27303189-27303246)
chr3 (553-609)||(36538191-36538248)
chr3 (537-593)||(1649853-1649909)
chr3 (503-609)||(19965885-19965992)
chr3 (507-607)||(1255057-1255158)
chr3 (553-609)||(46904744-46904801)
chr3 (553-609)||(50677319-50677376)
chr3 (500-593)||(43905865-43905958)
chr3 (480-609)||(51146867-51146996)
chr3 (553-593)||(4207376-4207416)
chr3 (411-455)||(43905976-43906020)
[»] chr8 (32 HSPs)
chr8 (346-609)||(7857880-7858144)
chr8 (338-609)||(18420614-18420890)
chr8 (341-609)||(13585089-13585358)
chr8 (347-609)||(43968075-43968339)
chr8 (341-609)||(43926328-43926599)
chr8 (341-609)||(44665051-44665317)
chr8 (347-609)||(42951774-42952044)
chr8 (341-609)||(3471382-3471659)
chr8 (341-531)||(3445472-3445661)
chr8 (411-609)||(32098183-32098383)
chr8 (341-609)||(34523956-34524210)
chr8 (340-609)||(27074373-27074633)
chr8 (452-609)||(18112011-18112175)
chr8 (345-609)||(5869327-5869586)
chr8 (340-453)||(18111602-18111717)
chr8 (422-494)||(1003958-1004032)
chr8 (411-494)||(41666058-41666141)
chr8 (472-609)||(3628752-3628889)
chr8 (537-609)||(23567279-23567352)
chr8 (466-593)||(35874840-35874968)
chr8 (553-609)||(12531561-12531618)
chr8 (537-609)||(39697943-39698016)
chr8 (549-609)||(1004056-1004118)
chr8 (500-593)||(30915310-30915403)
chr8 (553-607)||(42076110-42076165)
chr8 (410-460)||(12531432-12531482)
chr8 (553-605)||(29372359-29372412)
chr8 (340-388)||(1003901-1003949)
chr8 (410-460)||(39698079-39698130)
chr8 (411-457)||(23567418-23567464)
chr8 (498-579)||(2545957-2546037)
chr8 (553-593)||(5971778-5971818)
[»] chr7 (35 HSPs)
chr7 (350-609)||(46221708-46221969)
chr7 (346-609)||(8358299-8358564)
chr7 (358-609)||(18015587-18015839)
chr7 (340-609)||(33419122-33419393)
chr7 (341-609)||(42161125-42161398)
chr7 (341-609)||(33909855-33910123)
chr7 (341-609)||(36796377-36796645)
chr7 (379-605)||(4099794-4100023)
chr7 (398-609)||(11672429-11672645)
chr7 (343-609)||(44894034-44894306)
chr7 (342-609)||(6380089-6380359)
chr7 (339-520)||(38524971-38525154)
chr7 (347-537)||(12251466-12251657)
chr7 (411-606)||(7636334-7636536)
chr7 (340-609)||(26282547-26282802)
chr7 (347-609)||(40001701-40001948)
chr7 (340-436)||(27432380-27432476)
chr7 (446-609)||(32956670-32956834)
chr7 (345-604)||(25061697-25061957)
chr7 (413-609)||(26633227-26633422)
chr7 (525-609)||(773889-773974)
chr7 (437-609)||(41908064-41908237)
chr7 (538-609)||(12251293-12251365)
chr7 (466-609)||(30739038-30739182)
chr7 (340-404)||(44877006-44877070)
chr7 (498-609)||(36438356-36438468)
chr7 (498-609)||(40737996-40738108)
chr7 (348-609)||(1365821-1366068)
chr7 (498-609)||(9479074-9479186)
chr7 (552-609)||(18895402-18895460)
chr7 (554-609)||(42312012-42312068)
chr7 (371-571)||(40841289-40841491)
chr7 (411-460)||(25609964-25610014)
chr7 (339-375)||(11672387-11672423)
chr7 (340-375)||(4099740-4099775)
[»] chr4 (30 HSPs)
chr4 (341-609)||(32130795-32131065)
chr4 (340-609)||(28463593-28463865)
chr4 (340-609)||(53011503-53011771)
chr4 (341-609)||(19661169-19661438)
chr4 (340-582)||(21168844-21169088)
chr4 (352-609)||(11681747-11682008)
chr4 (352-609)||(11690026-11690287)
chr4 (342-609)||(41038038-41038309)
chr4 (341-609)||(44477827-44478098)
chr4 (340-609)||(23426171-23426436)
chr4 (345-609)||(27632194-27632457)
chr4 (352-609)||(23256394-23256653)
chr4 (340-609)||(29221626-29221900)
chr4 (455-593)||(16072498-16072636)
chr4 (341-461)||(39372815-39372936)
chr4 (498-609)||(29579827-29579939)
chr4 (341-609)||(45172650-45172903)
chr4 (341-609)||(34982029-34982283)
chr4 (449-609)||(21791552-21791712)
chr4 (498-609)||(35653985-35654097)
chr4 (466-609)||(43154793-43154936)
chr4 (341-494)||(51066707-51066862)
chr4 (466-607)||(22423600-22423741)
chr4 (498-609)||(5545276-5545388)
chr4 (466-593)||(24449040-24449168)
chr4 (360-469)||(29579655-29579766)
chr4 (443-494)||(48512342-48512393)
chr4 (553-609)||(55134210-55134267)
chr4 (413-582)||(26329065-26329233)
chr4 (537-609)||(10575528-10575601)
[»] chr2 (34 HSPs)
chr2 (345-609)||(19367424-19367690)
chr2 (341-609)||(26151752-26152022)
chr2 (349-609)||(18676316-18676579)
chr2 (341-609)||(13020210-13020482)
chr2 (339-609)||(42411563-42411835)
chr2 (349-609)||(25222119-25222382)
chr2 (340-609)||(41096543-41096816)
chr2 (341-609)||(45618765-45619035)
chr2 (340-609)||(7993421-7993691)
chr2 (348-609)||(6530455-6530718)
chr2 (341-566)||(42759797-42760023)
chr2 (338-572)||(36481191-36481425)
chr2 (340-609)||(4855777-4856052)
chr2 (352-583)||(45042187-45042421)
chr2 (344-609)||(2063600-2063864)
chr2 (405-593)||(12269279-12269466)
chr2 (455-609)||(34061861-34062015)
chr2 (341-609)||(15457306-15457559)
chr2 (342-609)||(18172945-18173197)
chr2 (466-605)||(39081314-39081453)
chr2 (498-609)||(21747235-21747347)
chr2 (341-609)||(18916059-18916313)
chr2 (472-609)||(1418832-1418968)
chr2 (423-607)||(31273173-31273357)
chr2 (498-609)||(27302533-27302645)
chr2 (432-609)||(36059910-36060087)
chr2 (537-609)||(38985714-38985787)
chr2 (553-607)||(38599404-38599459)
chr2 (553-609)||(13997316-13997373)
chr2 (341-460)||(17117778-17117896)
chr2 (413-593)||(1226289-1226465)
chr2 (411-460)||(38985849-38985899)
chr2 (569-609)||(17117650-17117691)
chr2 (553-609)||(29480642-29480699)
[»] chr6 (29 HSPs)
chr6 (345-609)||(6360554-6360818)
chr6 (352-609)||(2618155-2618414)
chr6 (341-609)||(3514855-3515127)
chr6 (347-609)||(6754001-6754265)
chr6 (341-609)||(29400929-29401199)
chr6 (350-609)||(7525171-7525434)
chr6 (363-609)||(57498-57747)
chr6 (347-552)||(24455014-24455220)
chr6 (444-609)||(12614721-12614885)
chr6 (341-530)||(31258543-31258734)
chr6 (467-609)||(29149316-29149462)
chr6 (457-609)||(628100-628254)
chr6 (341-433)||(12622144-12622236)
chr6 (500-609)||(3748573-3748683)
chr6 (444-609)||(30915371-30915539)
chr6 (341-609)||(31860806-31861060)
chr6 (553-604)||(21946109-21946161)
chr6 (507-609)||(1690638-1690741)
chr6 (340-457)||(29308611-29308727)
chr6 (350-460)||(1093181-1093290)
chr6 (553-593)||(31234913-31234953)
chr6 (523-609)||(14893422-14893509)
chr6 (530-605)||(22503725-22503798)
chr6 (340-460)||(1690774-1690894)
chr6 (466-609)||(19231529-19231671)
chr6 (553-609)||(29308472-29308529)
chr6 (556-593)||(32056065-32056102)
chr6 (553-609)||(1093046-1093102)
chr6 (553-593)||(31244050-31244089)
[»] chr1 (40 HSPs)
chr1 (341-609)||(51110106-51110378)
chr1 (345-609)||(12884142-12884409)
chr1 (342-609)||(14084706-14084975)
chr1 (346-609)||(48722375-48722643)
chr1 (344-609)||(50552285-50552554)
chr1 (339-609)||(17487288-17487563)
chr1 (341-609)||(18127942-18128215)
chr1 (340-609)||(33124635-33124909)
chr1 (346-609)||(10109511-10109779)
chr1 (423-609)||(30899526-30899715)
chr1 (341-609)||(6150494-6150780)
chr1 (342-609)||(20905292-20905564)
chr1 (341-530)||(20470516-20470706)
chr1 (341-609)||(52055338-52055611)
chr1 (372-609)||(29208103-29208341)
chr1 (411-609)||(27703534-27703737)
chr1 (398-609)||(25930448-25930663)
chr1 (411-606)||(30004915-30005108)
chr1 (345-609)||(6333521-6333787)
chr1 (371-557)||(28189211-28189403)
chr1 (345-609)||(12971214-12971465)
chr1 (498-609)||(50371081-50371193)
chr1 (511-609)||(28885676-28885775)
chr1 (466-609)||(5560399-5560542)
chr1 (339-473)||(2021942-2022076)
chr1 (498-609)||(44836726-44836838)
chr1 (479-609)||(37873767-37873898)
chr1 (552-608)||(13120872-13120929)
chr1 (553-609)||(17674359-17674416)
chr1 (546-609)||(2-66)
chr1 (340-609)||(1269347-1269610)
chr1 (553-609)||(22386842-22386899)
chr1 (498-606)||(42740057-42740166)
chr1 (444-607)||(3907366-3907528)
chr1 (453-593)||(15441193-15441332)
chr1 (518-585)||(9777380-9777447)
chr1 (551-593)||(32810373-32810415)
chr1 (553-609)||(24556808-24556865)
chr1 (341-453)||(28886140-28886253)
chr1 (466-573)||(26486407-26486513)
[»] scaffold0126 (1 HSPs)
scaffold0126 (341-609)||(16493-16769)
[»] chr5 (36 HSPs)
chr5 (352-609)||(13474427-13474689)
chr5 (340-609)||(13423648-13423923)
chr5 (341-609)||(26377779-26378052)
chr5 (377-609)||(13656033-13656269)
chr5 (343-609)||(36718572-36718841)
chr5 (351-609)||(12661102-12661368)
chr5 (339-559)||(8398766-8398989)
chr5 (340-609)||(19099319-19099592)
chr5 (398-574)||(26311851-26312029)
chr5 (341-609)||(43511423-43511677)
chr5 (341-609)||(4734587-4734840)
chr5 (498-609)||(138091-138203)
chr5 (341-609)||(10591278-10591529)
chr5 (384-605)||(27351179-27351404)
chr5 (480-609)||(29156120-29156249)
chr5 (340-609)||(20975788-20976044)
chr5 (537-609)||(42291886-42291959)
chr5 (498-609)||(17513941-17514053)
chr5 (498-593)||(931327-931422)
chr5 (552-609)||(18873458-18873516)
chr5 (444-574)||(8379562-8379691)
chr5 (498-609)||(10033493-10033606)
chr5 (449-609)||(40956217-40956372)
chr5 (349-460)||(42292022-42292131)
chr5 (560-609)||(3349734-3349784)
chr5 (553-609)||(5829387-5829442)
chr5 (555-608)||(7390406-7390460)
chr5 (411-456)||(17514092-17514138)
chr5 (554-609)||(17325847-17325904)
chr5 (431-593)||(23069099-23069262)
chr5 (554-606)||(33281677-33281730)
chr5 (537-593)||(37029054-37029108)
chr5 (411-460)||(29156062-29156113)
chr5 (381-488)||(40778675-40778785)
chr5 (412-460)||(3349869-3349917)
chr5 (498-594)||(40779139-40779235)
[»] scaffold0035 (1 HSPs)
scaffold0035 (340-532)||(22846-23041)
[»] scaffold0181 (2 HSPs)
scaffold0181 (440-609)||(17137-17307)
scaffold0181 (340-448)||(18128-18238)
[»] scaffold0100 (1 HSPs)
scaffold0100 (360-609)||(46178-46429)
[»] scaffold0564 (1 HSPs)
scaffold0564 (457-566)||(979-1088)
[»] scaffold0606 (1 HSPs)
scaffold0606 (537-609)||(8400-8473)


Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-128; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 57 - 340
Target Start/End: Original strand, 42117634 - 42117920
Alignment:
Q  57 catttgtttcaagtcttgatgaagtttctcggttgtcgcttatggaattttcaaaatgaacccacacatctaaactgaaacacgttcaagttgtcacacg 156  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  42117634 catttgtttcaagtcttgatgaagtttttaggttgtcgcttatggaattttcaaaatgaacgcacacatctaaactgaaacacgttcaagctgtcacccg 42117733  T
Q  157 atgtaactatatacggtgagacaccagcggacgacggtcggctgagcttttccatcgttgggttgcttctgat---tgttgatttttggcccaaaacaga 253  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| |||   || |||||||||||||||||||||    
T  42117734 atgtaactatatacagttagacaccagcggacgacggtcggctgagcttttccatctttgggttgcttcggattgatgatgatttttggcccaaaacaga 42117833  T
Q  254 tagtgtccatcccctaatgaatgtcattatgtggaaaatagtgcagtaagctagtctctccgacgtaaatggccgactgattagctt 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42117834 tagtgtccatcccctaatgaatgtcattatgtggaaaatagtgcagtaagctagtctctccgacgtaaatggccgactgattagctt 42117920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 41707331 - 41707060
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  | |    
T  41707331 caggcccagccttgagggtgtgcaaggtgttcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatacccaccccccact 41707232  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||    
T  41707231 taaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcct 41707132  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41707131 atcaaaccacccctaatttgcataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 41707060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 8363960 - 8364231
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  | |    
T  8363960 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacgggcctctaacgaaaaattaaatctaatatccaccccccact 8364059  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||| ||||| ||||||||| ||||||||||||||    
T  8364060 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactcttgttctcctttttgtacataaatcggatcct 8364159  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  8364160 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcaca 8364231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 46791974 - 46791702
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    |||||||| ||||||||||||||||||||| | ||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |     
T  46791974 tcaggccccgccttgagggtgtgcaaggtgcttaactaagtcgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccaccccccac 46791875  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  46791874 ttaaataaaaaatatatatgttataacattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcc 46791775  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||    
T  46791774 tatcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgcaagaatcaca 46791702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 23068001 - 23067730
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca-ccccattt 439  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  23068001 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctccaattgctacggacctctaacgaaaaattaaatttaatacccacccccattt 23067902  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||   |||||||| ||||||| ||||||||| ||||||||||||||    
T  23067901 aaataaaatatatatatgttatatcattttctttctttagtacacgtttgagttttttttctagactttagttctcctttttgtacataaatcggatcct 23067802  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||| || |||||| |||||||||||    
T  23067801 atcaaaccacccctaatttgtataatcacttcaccagtcaatttgaaaagttatttcatttaaagaatcaca 23067730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 338 - 609
Target Start/End: Complemental strand, 29388033 - 29387759
Alignment:
Q  338 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-- 435  Q
    ||||||| | ||||||||| |||||||||||| ||||| ||||||| ||| |||||| |||| || ||||||||||||||||||||||||||||||||      
T  29388033 cttcaggtctggccttgagtgtgtgcaaggtgctcaaccaggccggaccttcaaatgctacgagcttctaacgaaaaattaaatctaatacccacccccc 29387934  T
Q  436 atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 535  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||    
T  29387933 acttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggat 29387834  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  29387833 cctatcaaaccacccctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcaca 29387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 51939831 - 51939561
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||| |||||||||||||||||||| ||||| |||| ||||||||||||  || ||||||||||| |||||||||||||||||||||||||  | |    
T  51939831 caggcccgaccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaattctatgggcctctaacaaaaaattaaatctaatacccaccccccact 51939732  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||||||||||  |||||||| ||||||| ||||||    
T  51939731 taaataaaaaatatatatgttatatccttttctttctttagtccacgtttgagttttt-tctagactctagttctcttttttgtacataaatcagatcct 51939633  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51939632 atcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 51939561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 342 - 609
Target Start/End: Complemental strand, 28133010 - 28132740
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 439  Q
    ||||| ||| |||||||||||||||||| ||||| ||  ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||  ||||    
T  28133010 aggccaggctttgagggtgtgcaaggtgctcaaccagatcgggccttcaaatgttacgggcctttaacgaaaaattaaatataatacccaccccccattt 28132911  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||| ||   |||||||||||||||| ||||||||| ||||||| |||||||    
T  28132910 aactaaaaaatatatatgttatatcattttctttctttagtacacatttgagattttttctagactctagttctcctttttgtacataaatcagatccta 28132811  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  28132810 tcaaatcacccttaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 28132740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 52655399 - 52655128
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt-- 438  Q
    |||||||| |||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||| |       
T  52655399 caggcccgaccttgagggtgtgcaaggtgcttaaccaggccgggcctc-aaatgttatgggcctctaac-aaaaattaaatctaatccccaccccctaca 52655302  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacac--gtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||   |||||||||||||||| ||||||||||||||||||||||    
T  52655301 taaataaaaaatatatatgttatatcattttctttctttagtacacacgtttgagtttttctctagactctagttctcctttttgtatataaatcggatc 52655202  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  52655201 ctatcaaaccaccactaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 52655128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 21785059 - 21784789
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||| |||||||||||||||||| | ||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||  |||||| | ||    
T  21785059 caggcccggctttgagggtgtgcaaggtgcttaaccaggccgggcctcccaatgctacgggtctctaacgaaaaattaaatctaatattcacccccactt 21784960  T
Q  440 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||| |||||||||||||| | ||| ||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||    
T  21784959 aaataaaaaaatatatatgttatataactttatttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatcct 21784861  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  21784860 atcaaaccacccctaatttgtataatcacttaatcagttaatttggaaagctatttcattgaaagaatcaca 21784789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 347 - 609
Target Start/End: Original strand, 18407986 - 18408250
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaata 444  Q
    |||| ||| ||||||| |||||| |||| |||||||||||| ||| || |||||  || |||||||||||||||| |||||||||||  ||| |||||||    
T  18407986 cggctttgtgggtgtgtaaggtgttcaattaggccgggccttcaattgctacggatctttaacgaaaaattaaatataatacccaccttccacttaaata 18408085  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| ||||||||||||||||||||    
T  18408086 aaaaatatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcatttttgtacataaatcggatcctatcaaa 18408184  T
Q  545 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcaca 609  Q
     ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18408185 ccacccctaatttgtataatcacttaatcagtcaatttgaaaagctaatccattgaaagaatcaca 18408250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 24252406 - 24252679
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    |||| |||| ||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |     
T  24252406 tcagacccgaccttgagggtgtgtaaggtgctcaaccagaccgggcctccaaatgttacgggcctctaactaaaaattagatctaatacccacccccgac 24252505  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggat 535  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||   |  ||||||||||||||||||||||||| |||| || |||    
T  24252506 ttaagtaaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttttctagactctagttcttctttttgtacataa-tcagat 24252604  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| |||| || |||| || ||||||||||    
T  24252605 cctatcaaaccacccttaatttgtataatcacttaatcagtcaatttggaaagttatttcagtgcaagaatcaca 24252679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 27730043 - 27729774
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 440  Q
    ||||||| || ||||| ||||||||| || ||||  ||| ||| |||||||||| |||||||||||||||||||||||||| ||||||  |||||| |||    
T  27730043 caggcccagctttgagagtgtgcaagatgctcaatcaggtcggacctccaaatggtacgggcctctaacgaaaaattaaatataatacgtaccccactta 27729944  T
Q  441 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 540  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| |||    
T  27729943 aataaaaaatatatatgttatatcattttctttcattagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcttat 27729844  T
Q  541 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| |||||||||||||||||||||| |||||| |||||||| ||||| | || || ||||||||||||    
T  27729843 caaaccacccctaatttgtataatcacataatcaatcaatttggaaagcaatttgatcgaaagaatcaca 27729774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 341 - 540
Target Start/End: Complemental strand, 27111082 - 27110882
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--t 438  Q
    |||||||||||||||||||||| |||||| ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |    
T  27111082 caggcccggccttgagggtgtg-aaggtgctcaaccaggcggggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctact 27110984  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||    
T  27110983 taaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttctcatttttgtacataaatcgtatcct 27110884  T
Q  539 at 540  Q
    ||    
T  27110883 at 27110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 348 - 609
Target Start/End: Complemental strand, 23164839 - 23164577
Alignment:
Q  348 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataa 445  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||||||||||  | ||||||| ||| ||||||||  |||||||||||||||  | ||||||||    
T  23164839 ggccttgggggagtgcaaggtgttcaaccaggtcgggcctccaaatgccatgggcctcaaacaaaaaattatgtctaatacccacccctcacttaaataa 23164740  T
Q  446 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||| |||||||||||||| |||||||| || |||||||||||||||||   |||||||||||||||| ||||||||| ||||||| ||||||||||||     
T  23164739 aaaa-atatatgttatatccttttcttttttcagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatctgatcctatcaaac 23164642  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||| |||||||| ||  ||| ||||||||||||||||||    
T  23164641 cacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcaca 23164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 347 - 560
Target Start/End: Original strand, 6715245 - 6715458
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaata 444  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  6715245 cggccttgagggtgtgcaaggtgctcaaccaggccgagcctctaaatgttacgggcctctaacgaaaaattaaatttaatacccaccctccatttaaata 6715344  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 544  Q
    |||||||||||||||||||| || | | | |||| ||||||||||| |||   |||||||||||||||| ||||||||||||||||||||||||||||||    
T  6715345 aaaaatatatatgttatatctttatatct-tttaatacacgtttga-tttttttctagactctagttctcctttttgtatataaatcggatcctatcaaa 6715442  T
Q  545 tcacccctaatttgta 560  Q
     ||||  |||||||||    
T  6715443 ccacctataatttgta 6715458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 411 - 605
Target Start/End: Original strand, 54430412 - 54430607
Alignment:
Q  411 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 508  Q
    ||||||||| |||||||||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   ||||| |||||    
T  54430412 aaaaattaagtctaatacccacctcccacttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagttttt-tctaggctcta 54430509  T
Q  509 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    ||||| ||||||||| ||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  54430510 gttctcctttttgtacataaatctgatgttatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagttatttcattaaaagaat 54430607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 351 - 478
Target Start/End: Original strand, 51064299 - 51064426
Alignment:
Q  351 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaaaat 450  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  51064299 cttgagggtgtgcaaggtgttcaatcaggccgggcttccaaatactacggacctctaacgaaaaattaaatctaatacccattccacttaaataaaaaat 51064398  T
Q  451 atatatgttatatcattttctttcttta 478  Q
    |||||||||||||| |||||||||||||    
T  51064399 atatatgttatatctttttctttcttta 51064426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 411 - 609
Target Start/End: Complemental strand, 25599291 - 25599091
Alignment:
Q  411 aaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactct 507  Q
    ||||||||| ||||||| | ||||  || |||||||||||| ||||  |||||||  ||||||||||| |||||| ||||||||||   | | |||||||    
T  25599291 aaaaattaagtctaatatctaccctccacttaaataaaaaaaatat--gttatattcttttctttcttcagtacaggtttgagttttttttttagactct 25599194  T
Q  508 agttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatc 606  Q
    |||||| ||||||||| ||||||| ||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  25599193 agttctcctttttgtacataaatctgattctatcaaaccacctctaatttatataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatc 25599094  T
Q  607 aca 609  Q
    |||    
T  25599093 aca 25599091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 609
Target Start/End: Original strand, 13401311 - 13401518
Alignment:
Q  402 cctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatc 499  Q
    |||| ||| |||| |||| | ||||||||||||  || |||||||||||| || ||||  ||||| |||||||| ||  || |||||| ||||||   ||    
T  13401311 cctcgaacaaaaatttaagtttaatacccaccctacacttaaataaaaaaaatgtatg--atatccttttcttttttcggtccacgtt-gagtttttttc 13401407  T
Q  500 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 598  Q
    || ||||||||||| ||||||||| ||| ||  |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13401408 taaactctagttctcctttttgtacatacattcgatcctatcaaaccactcttaatttgtataatcacttaatcagtcaatttgaaaagctatttcattg 13401507  T
Q  599 aaagaatcaca 609  Q
     ||||||||||    
T  13401508 gaagaatcaca 13401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 48627288 - 48627034
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca-ccccattt 439  Q
    |||||||| ||||||||| |||||||||| ||||  | |||||||||||||| | || |||||||  |  ||||||||| ||||||||||| ||||| ||    
T  48627288 caggcccgaccttgagggggtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctc--ataaaaaattaactctaatacccacccccactt 48627191  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||       |||||       |||||||||||||||   |||||||| |||||||  | | || | ||||||| ||| |||    
T  48627190 aaataaaaaatatatatgtta------cttctt-------tacacgtttgagttt-tttctagactttagttctcatatctggacataaatctgatacta 48627105  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| | |||| | ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  48627104 tcagaccaccgccaatttgtataatcacttgatcagtcaatttgaaaatctatttcattgaaagaatcaca 48627034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 413 - 593
Target Start/End: Complemental strand, 40152332 - 40152152
Alignment:
Q  413 aaattaaatctaatacc-caccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagtt 511  Q
    ||||||| ||||||||  ||| ||||||||| |||||| ||||||||||  || |||| ||||||  ||||||||||||||||   | ||||||||| ||    
T  40152332 aaattaagtctaatacaacactccatttaaacaaaaaaaatatatgttacttctttttttttcttcggtacacgtttgagttttttt-tagactctaatt 40152234  T
Q  512 cttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||  | ||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||    
T  40152233 cttctttttagacatagatctgatgctaccaaatcatccccaatttgtataatcacttaatcggtcaatttgaaaaactatt 40152152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 609
Target Start/End: Original strand, 7766983 - 7767122
Alignment:
Q  472 ttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 570  Q
    ||||||||||||||| |||||||   | |||||||| |||||| |||| || | ||||||  ||| ||||||||  |||   ||||||||||||||||||    
T  7766983 ttctttagtacacgtatgagttttttttctagactccagttctactttctggacataaatttgatgctatcaaacaaccatcaatttgtataatcactta 7767082  T
Q  571 atcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7767083 atcagtcaatttgaaaagctatttcattgaaagaatcaca 7767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 21596282 - 21596394
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    ||||||||||| |||| |||| || | ||||||| ||| |||||||| ||| || ||||||||||||||||||||||||| ||||| ||||||| |||||    
T  21596282 tctagactctaattctcctttctggacataaatcagatgctatcaaaccactcccaatttgtataatcacttaatcagtcgatttggaaagctatttcat 21596381  T
Q  597 tgaaagaatcaca 609  Q
    |  ||||||||||    
T  21596382 tacaagaatcaca 21596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 609
Target Start/End: Complemental strand, 42009377 - 42009267
Alignment:
Q  500 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 598  Q
    |||||| ||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||||||||||| ||||| || |||||||    
T  42009377 tagactttagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttaaaaagttatttcattg 42009278  T
Q  599 aaagaatcaca 609  Q
    |||||||||||    
T  42009277 aaagaatcaca 42009267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 27303189 - 27303246
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  27303189 aatttgtataatcacttaatcaatcaatttgaaaagctatttcattgaaagaatcaca 27303246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 36538248 - 36538191
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36538248 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaca 36538191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 1649909 - 1649853
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  1649909 ctatcaaatcacccccaatttgtataatcacttaatcattcaatttgaaaatctatt 1649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 609
Target Start/End: Complemental strand, 19965992 - 19965885
Alignment:
Q  503 actctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaa 601  Q
    |||||| |||| ||||||| | ||||||| ||| |||||||| |||  | |||||||||||||||||||| ||| || ||||||||||| |||||| |||    
T  19965992 actctaattctcctttttggacataaatctgatgctatcaaaccactgccaatttgtataatcacttaattagttaaattgaaaagctatttcattaaaa 19965893  T
Q  602 gaatcaca 609  Q
    ||||||||    
T  19965892 gaatcaca 19965885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 507 - 607
Target Start/End: Complemental strand, 1255158 - 1255057
Alignment:
Q  507 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    ||||||||||||||| | ||||||| ||| ||||||||  |||  ||||||||||||| |||||||| ||||||||  |||| || ||||||||||||||    
T  1255158 tagttcttctttttggacataaatctgatgctatcaaacgacctttaatttgtataatgacttaatcggtcaatttagaaagttatttcattgaaagaat 1255059  T
Q  606 ca 607  Q
    ||    
T  1255058 ca 1255057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 46904744 - 46904801
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  46904744 aatttgtataatcacttaatcagtcaatttaaaaaactatttcattgaaagaatcaca 46904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 50677376 - 50677319
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  50677376 aatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaacaatcaca 50677319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 593
Target Start/End: Complemental strand, 43905958 - 43905865
Alignment:
Q  500 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||| ||||||| || | || | ||||||| | | ||||||||  ||||  |||||||||||||||| ||||||||||||||||||| ||||    
T  43905958 tagactttagttctcctatctggacataaatctggtactatcaaactaccctcaatttgtataatcactcaatcagtcaatttgaaaagttatt 43905865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 609
Target Start/End: Original strand, 51146867 - 51146996
Alignment:
Q  480 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 579  Q
    ||||||| |||||||   |||||| ||||||||  ||||||| | ||||||  ||| |||| ||| ||||   |||||| ||| ||||||||||||||||    
T  51146867 tacacgtatgagtttttttctagattctagttccactttttggacataaatttgatgctattaaaccaccatcaatttgaata-tcacttaatcagtcaa 51146965  T
Q  580 tttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||| ||| || |||||||||||||||    
T  51146966 tttaaaaaactattttattgaaagaatcaca 51146996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 593
Target Start/End: Complemental strand, 4207416 - 4207376
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  4207416 aatttgtataatcacttaatcattcaatttggaaagatatt 4207376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 455
Target Start/End: Complemental strand, 43906020 - 43905976
Alignment:
Q  411 aaaaattaaatctaatacccaccccatttaaataaaaaatatata 455  Q
    ||||||||| |||| || |||||||| ||||||||||||||||||    
T  43906020 aaaaattaactctattatccaccccacttaaataaaaaatatata 43905976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 346 - 609
Target Start/End: Original strand, 7857880 - 7858144
Alignment:
Q  346 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataa 445  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  7857880 ccggccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaattgctacgggcttctaacgaaaaattaaatttaatacccaccccacttaaataa 7857979  T
Q  446 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  7857980 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgaacataaatcggatcctatcaaat 7858079  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||    
T  7858080 cacccctaatttgtataatcacttaatcagtcaatttggaaagttaattcatttaaagaatcaca 7858144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 338 - 609
Target Start/End: Complemental strand, 18420890 - 18420614
Alignment:
Q  338 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--c 435  Q
    ||||||||| |||||||| ||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |    
T  18420890 cttcaggcctggccttgatggtgtgcaaggttttcaactaggtcgggcctccaaatgttacgggcttctaacgaaaaattaaatctaatacccaccctcc 18420791  T
Q  436 atttaaataaaaaatatatat--gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgg 533  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   || ||||||||||||| ||||||||| ||||||| |    
T  18420790 acttaaataaaaaatatatatatgttatatcattttctttctttagtacacgtttgagtttttttccagactctagttctcctttttgtacataaatcag 18420691  T
Q  534 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcaca 609  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18420690 atcctatcaaaccacacttaatttgtataatcacttaatcagtcaatttgaaaagctgtttcattgaaagaatcaca 18420614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 13585089 - 13585358
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||| |||| ||||||||||||||| ||||  || |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||  |||    
T  13585089 caggcccgaccttaagggtgtgcaaggtgctcaatcagaccgggccttcaaatgcaacgggcctctaacgaaaaattaaatctaatacccaccccccatt 13585188  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |  |||||||| ||||||| ||||||    
T  13585189 taactaaaaaatat--atgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcttttttgtacataaatcagatcct 13585286  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  13585287 atcaaaccacccctaatttgtataatcaattaatcagtcaatttggaaagctatttcattgaaagaatcaca 13585358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 347 - 609
Target Start/End: Complemental strand, 43968339 - 43968075
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt-taaataa 445  Q
    |||| ||||| |||||||||||| ||||  |||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||   | |||||    
T  43968339 cggctttgagagtgtgcaaggtgctcaatcaggttgggcctccaaatattacaggcctctaacgaaaaattaaatctaatacccaccccacacttaataa 43968240  T
Q  446 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||     
T  43968239 aaaaaatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaac 43968140  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  43968139 cactcctaatttgtataatcacttaatcaatcaatttgaaaagttatttcattgaaagaatcaca 43968075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 43926599 - 43926328
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 438  Q
    ||||||||||||||||||||||||||||| ||||  ||| |||| |||||||||  |||||||||||| |||||||||||| |||||||||||  ||| |    
T  43926599 caggcccggccttgagggtgtgcaaggtgctcaatcaggtcgggtctccaaatgccacgggcctctaaggaaaaattaaatttaatacccacctcccact 43926500  T
Q  439 taaataaaaaatatatatgttatatcattttctttc-tttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||||||||||||||||||  ||| | || ||||||||||||||||||||   | ||||||||||||||| ||||||||||||||||||||||    
T  43926499 taaataaaaaatatatatgttatatc--tttatatcatttagtacacgtttgagttttttttctagactctagttctactttttgtatataaatcggatc 43926402  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  43926401 ctatcaaaccacccataatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 43926328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 44665317 - 44665051
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catt 438  Q
    |||||||| ||||||||||||| |||||| ||||  | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||  || |    
T  44665317 caggcccgaccttgagggtgtgtaaggtgctcaatcaagccgggcctccaaatgctacgggcctctaacgcataattaaatctaatacccacccctcact 44665218  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||  |||||||||||||| ||||||||||    |||||||||||| |||   | |||||||||||||| ||||||||| |||||||||||||    
T  44665217 taaataaaaa--atatatgttatatctttttctttct----tacacgtttgagttttttttatagactctagttctcctttttgtacataaatcggatcc 44665124  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||| ||||||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||    
T  44665123 tatcaaaccacctctaatttgtatcatcacttaatcagtctatttggaaagttatttcattgaaagaatcaca 44665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 347 - 609
Target Start/End: Complemental strand, 42952044 - 42951774
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaata 444  Q
    ||||||||||||||||||||||| || |  ||  ||| | || ||||| || |||| |||| |||||||||||||||||||||||||||  | |||||||    
T  42952044 cggccttgagggtgtgcaaggtgctcgatcagttcggacttctaaatgctatgggcttctagcgaaaaattaaatctaatacccaccccccacttaaata 42951945  T
Q  445 aaaaata-tatatgttatatcattttctttctttagtacacgtttgagtttaaat----ctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||   |    |||||||||||||||  |||||||| |||||||| ||||||    
T  42951944 aaaaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttcttctagactctagttctcatttttgtacataaatcgaatccta 42951845  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  42951844 tcaaaccactcctaatttgtataatcacttaatcagtcaatttgaaaagttattttattgaaagaatcaca 42951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 3471382 - 3471659
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||||||||| ||| ||||||| || ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| | |||||||||||||  | |    
T  3471382 caggcccggccttgggggagtgcaagatgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtgtaatacccaccccccact 3471481  T
Q  439 taaataaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctagactctagttcttctttttgtatataaatcg 532  Q
    ||||||||||| | | ||||||||||||||||||||||| ||||||| |||||||||   |     ||||| |||||||||  |||||||| ||||||      
T  3471482 taaataaaaaaaaaaatatgttatatcattttctttcttcagtacacatttgagttttttttctttctagaatctagttctcatttttgtacataaatgt 3471581  T
Q  533 gatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3471582 gattctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 3471659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 341 - 531
Target Start/End: Original strand, 3445472 - 3445661
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||| |||||||||||||||||| ||||  || ||||| || |||||| ||||||  ||||||||| |||||||||||||||||||||| | ||    
T  3445472 caggcccggc-ttgagggtgtgcaaggtgctcaatgagaccgggtcttcaaatgctacgggtttctaacgaagaattaaatctaatacccacccccactt 3445570  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 531  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||   | |||||||||||||| ||||||||| |||||||    
T  3445571 aaataaaaaatatatatgttatatctttttctttctttagtacacgtttgaattt-tttttagactctagttctcctttttgtacataaatc 3445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 411 - 609
Target Start/End: Complemental strand, 32098383 - 32098183
Alignment:
Q  411 aaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactcta 508  Q
    ||||||||| |||||||||||||||  | |||| ||||||||||||||||||  || ||||||||||| |||||||||||||||||   |||||||||||    
T  32098383 aaaaattaagtctaatacccaccccccacttaattaaaaaatatatatgttacttctttttctttcttcagtacacgtttgagttttt-tctagactcta 32098285  T
Q  509 gttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 607  Q
    ||| | ||||||| | ||||||  ||| |||||||| ||| | |||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  32098284 gttatcctttttggacataaatttgatgctatcaaaccactcttaatttgtatgatcacttaatcagtcaatttggaaaactatttcattgaaagaatca 32098185  T
Q  608 ca 609  Q
    ||    
T  32098184 ca 32098183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 34524210 - 34523956
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||||||||||| |||||||||| ||||  | ||||| |||||||| | ||||||||||  |  ||||||||||||||||||||||||| | ||    
T  34524210 caggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctacgggcctcaga--aaaaattaaatctaatacccacccccactt 34524113  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||    
T  34524112 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtacta 34524027  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34524026 tcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 34523956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 27074373 - 27074633
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat-- 437  Q
    ||||||||||||||||||| ||||||| || |||| |||  ||||||| ||||||  | || |||| ||| ||||||||| |||||||| ||| || |      
T  27074373 tcaggcccggccttgagggagtgcaagatgctcaattagatcgggccttcaaatgcaatggacctcaaacaaaaaattaagtctaatactcactccctac 27074472  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    |||||||||||| |||||||||||||||||||||||||| | ||| |           | ||   |||||||| || ||||||||| ||||||| |||||    
T  27074473 ttaaataaaaaa-atatatgttatatcattttctttcttcaatactc-----------actccctactctagtactcctttttgtacataaatctgatcc 27074560  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| |||||||    
T  27074561 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttaaaagtctatttcattgaaaaaatcaca 27074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 609
Target Start/End: Original strand, 18112011 - 18112175
Alignment:
Q  452 tatatgttatatcattttctttctttagtacacgtttgagtttaaat------ctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||||||||||||||||||||||||||||| ||||||||||||   |      ||||| |||||||||  ||| |||| |||||||||||| |||||||     
T  18112011 tatatgttatatcattttctttctttagtatacgtttgagtttttttttctttctagaatctagttctcttttatgtacataaatcggatcatatcaaac 18112110  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||    
T  18112111 cactcctaatttgtataatcacttaatcagtcaatttggaaaactattttattgaaagaatcaca 18112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 609
Target Start/End: Complemental strand, 5869586 - 5869327
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaat 443  Q
    |||||| ||||||| |||||||||| || || |||||||||||||||||| ||| |||||  ||   |||||||  |||||||||||||| | | |||||    
T  5869586 cccggctttgagggagtgcaaggtgctctaccaggccgggcctccaaatggtactggcctaaaa---aaaattatgtctaatacccaccctcgtctaaat 5869490  T
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 543  Q
    |||||| | ||||||||  |  |||||||| || |||||||| ||||||||   | |||||| ||||||| |||| |||| |||||| | || |||||||    
T  5869489 aaaaaaaa-atatgttacttatttttctttattcagtacacgattgagttttttt-tagactttagttctcctttctgtacataaattg-atactatcaa 5869393  T
Q  544 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | |||| | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5869392 accaccac-aatttttaaaatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 5869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 18111602 - 18111717
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 437  Q
    |||||||||||||||||||||||||||||| ||||  ||| ||| |||||||||| || ||| ||||| ||||||||||||||||| |||||||  | |     
T  18111602 tcaggcccggccttgagggtgtgcaaggtgctcaatcaggtcggacctccaaatgctatgggtctctatcgaaaaattaaatctaacacccaccctcaac 18111701  T
Q  438 ttaaataaaaaatata 453  Q
    ||||||||||||||||    
T  18111702 ttaaataaaaaatata 18111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 1003958 - 1004032
Alignment:
Q  422 ctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 494  Q
    ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1003958 ctaatacccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacatgtttgagttt 1004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 411 - 494
Target Start/End: Complemental strand, 41666141 - 41666058
Alignment:
Q  411 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 494  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||  |||| |||||||||  ||||||||||||||||    
T  41666141 aaaaattaagtctaataccaaccccacttaaataaaaaatatatatgttacttcatcttctttcttcggtacacgtttgagttt 41666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 472 - 609
Target Start/End: Complemental strand, 3628889 - 3628752
Alignment:
Q  472 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 571  Q
    ||||| ||||||||| |||||||   |||||||||||||||| | || ||   ||||||  ||| |||||||| ||||  |||||||||||||||| |||    
T  3628889 ttcttcagtacacgtatgagttttt-tctagactctagttctacattctggtcataaatttgatgctatcaaaccaccattaatttgtataatcacataa 3628791  T
Q  572 tcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  3628790 tcagtcaatttgaaaagttatttcattgaaagaatcaca 3628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 23567352 - 23567279
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||    
T  23567352 ctatcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaatactatttcattgaaagtatcaca 23567279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 593
Target Start/End: Original strand, 35874840 - 35874968
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 563  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  35874840 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 35874938  T
Q  564 tcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||| ||||||||||||| |||||    
T  35874939 tcacttaatcggtcaatttgaaaaactatt 35874968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 12531561 - 12531618
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  12531561 aatttgtataatcacttaatcagtcaatttaaaaatctatttcattgaaagaatcaca 12531618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 39698016 - 39697943
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| |||| | ||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  39698016 ctatcaaaccaccaccaatttgtatgatcatttaattagtcaatttgaaaagctatttcattgaaagaatcaca 39697943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 549 - 609
Target Start/End: Original strand, 1004056 - 1004118
Alignment:
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta--ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  1004056 ccctaatttgtataatcacttaatcagtcaatttgaaaaaattatttcattgaaagaatcaca 1004118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 593
Target Start/End: Complemental strand, 30915403 - 30915310
Alignment:
Q  500 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||||||| |||| |||| || | ||| ||| ||| ||| |||| | || | ||| |||||||||||||||||||||||||||||||||||||    
T  30915403 tagactctaattctcctttctggacatagatctgatgctaccaaacctcctccaatatgtataatcacttaatcagtcaatttgaaaagctatt 30915310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 607
Target Start/End: Original strand, 42076110 - 42076165
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatca 607  Q
    |||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  42076110 aatttgtataataacttaatcaatcaatttgaaaagctataacattgaaagaatca 42076165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 12531432 - 12531482
Alignment:
Q  410 gaaaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 460  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||||||||    
T  12531432 gaaaaatcaactctaatacccaccccacttaaataaaaaatagatatgtta 12531482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 605
Target Start/End: Original strand, 29372359 - 29372412
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctattc-attgaaagaat 605  Q
    |||||||||||||| |||||||||||||||| |||| ||||| |||||||||||    
T  29372359 aatttgtataatcatttaatcagtcaatttggaaagttattcaattgaaagaat 29372412  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 1003901 - 1003949
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctc 388  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| |||||    
T  1003901 tcaggcccggccttgagggtgtgcaaagtgctcaaccaggccgcgcctc 1003949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 460
Target Start/End: Complemental strand, 39698130 - 39698079
Alignment:
Q  410 gaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 460  Q
    |||||||||| | ||||||||||| ||| |||||||||||||||||||||||    
T  39698130 gaaaaattaactttaatacccacctccacttaaataaaaaatatatatgtta 39698079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 457
Target Start/End: Complemental strand, 23567464 - 23567418
Alignment:
Q  411 aaaaattaaatctaatacccaccccatttaaataaaaaatatatatg 457  Q
    ||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  23567464 aaaaattaactctgatacccactccacttaaataaaaaatatatatg 23567418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 579
Target Start/End: Complemental strand, 2546037 - 2545957
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 579  Q
    |||||||||||||||| ||| ||  | |||| ||| || ||||||||||||||| || || |||||||||||||||| ||||    
T  2546037 tctagactctagttctccttatttgacataattcgcatgctatcaaatcacccc-aaattatataatcacttaatcaatcaa 2545957  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 593
Target Start/End: Complemental strand, 5971818 - 5971778
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  5971818 aatttctatcatcacttaatcagtcaatttaaaaagctatt 5971778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 4e-98; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 350 - 609
Target Start/End: Complemental strand, 46221969 - 46221708
Alignment:
Q  350 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaa 448  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||||    
T  46221969 ccttgagggtgtgcaaggtgctcaactaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccacccctacttaaataaaaa 46221870  T
Q  449 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 548  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||  |||||||| |||||||| |||||||||||  ||    
T  46221869 atatatatgttatatcattttctttctttagtatacgtttgagtttttttctagactctagttctcttttttgtacataaatcgaatcctatcaaactac 46221770  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  46221769 ccctaatttgtagaatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 46221708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 346 - 609
Target Start/End: Complemental strand, 8358564 - 8358299
Alignment:
Q  346 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc-catttaaata 444  Q
    ||||| |||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| || |||||||    
T  8358564 ccggctttgagggtgtgcaaggtgctcatccaggccgggcctccaaatgctacgggcctctaacaaaaaattaaatctaatatccaccctcacttaaata 8358465  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 544  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  8358464 aaaaatatatatgttatatcattttctttctttagtatacgtttgagtttttctctagactttagttctcctttttgtacataaatcggatcctatcaaa 8358365  T
Q  545 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcaca 609  Q
     |||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  8358364 ccacccctaatttatataatcacttaatcagtcaatttaaaaagttatctcattgaaagaatcaca 8358299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 358 - 609
Target Start/End: Complemental strand, 18015839 - 18015587
Alignment:
Q  358 gtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatat 456  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  18015839 gtgtgcaagatgctcaaccaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccccacttaaataaaaaatatatat 18015740  T
Q  457 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 556  Q
    |||||||| |||||||||||||||||| ||||||||||   |||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||    
T  18015739 gttatatccttttctttctttagtacatgtttgagttttt-tctagactctagttttcctttttgtacataaatcggatcctatcaaaccacccctaatt 18015641  T
Q  557 tgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  18015640 tgtataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcaca 18015587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 33419393 - 33419122
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattt 439  Q
    ||||||||||||| ||||||| ||| |||| ||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||| ||    
T  33419393 tcaggcccggcctcgagggtgagcatggtgctcaaccaggccgggtctccaaatattacggtcctctaacgaaaaattaaatctaataaccaccccactt 33419294  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||   ||||||||||||||||| |||||||| |||||||||||||||    
T  33419293 aaataaaaaatatatatgttatatccttttctttctttaatacacgtttgagtttttttctagactctagttcttgtttttgtacataaatcggatccta 33419194  T
Q  540 tcaaatcacccctaatttgtataatcacttaa-tcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||  ||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||    
T  33419193 tcaaactacccctaatttgtataatcacttaattaagtcaatttgaaaagttatttcattgaaagaatcaca 33419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 42161398 - 42161125
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||| |||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||  | |    
T  42161398 caggcccgaccttgagggtgtgcaaggtgctcaaccaggccgagcctccaaatgctacgggcctctaacgaaaaattaaatttaatatcctccccccact 42161299  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc- 537  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||| |||||| ||||||     
T  42161298 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctaattctcatttttgtacataaattggatcct 42161199  T
Q  538 -tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     ||||||| |||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  42161198 atatcaaaccacccctaatttgtataatcacttgatcagttaatttggaaagctatttcattgaaagaatcaca 42161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 33909855 - 33910123
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||  | |    
T  33909855 caggcctggccttgggggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccacccctcact 33909954  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    ||||||||||| | ||||||||||||  ||||||||||  ||||||||||||||||   |||||||||||||||| ||||||||| ||||||| ||||||    
T  33909955 taaataaaaaaaa-atatgttatatc--tttctttcttcggtacacgtttgagtttttttctagactctagttctcctttttgtacataaatctgatcct 33910051  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  33910052 atcaaatcacccctaatttgtataatcgcttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 33910123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 36796645 - 36796377
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 438  Q
    |||||||| |||||||| ||||||||||| ||||| ||||||| |||||||||  ||||| ||||||||||||||| ||||||||||||||||  |||||    
T  36796645 caggcccgaccttgaggctgtgcaaggtgctcaaccaggccgg-cctccaaatactacggacctctaacgaaaaat-aaatctaatacccacctcccatt 36796548  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcc 537  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||| |||||||| ||||||||| |||||||||||||    
T  36796547 taaataaaaaatatatatgttatatcattt-ctttctttagtacacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatcc 36796450  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||  |||| ||||||||||||| |||||||||||||||||| |||  || ||||||||||||||||||    
T  36796449 tatcaaactacccttaatttgtataataacttaatcagtcaatttggaaaattatttcattgaaagaatcaca 36796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 379 - 605
Target Start/End: Original strand, 4099794 - 4100023
Alignment:
Q  379 gccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctt 476  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||    
T  4099794 gccgggtctccaaatgctacgggcttctaacgaaaaattaaatttaatacccacctcccacttaaataaaaaatatatatgttatatccttttctttctt 4099893  T
Q  477 tagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcag 575  Q
    ||||||||||||||| |||   ||||||| ||| |||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||     
T  4099894 tagtacacgtttgagttttttttctagacgctaattctcctttttgtacataaatcggat-ctatcaaaccacccctaatttgtataatcacttaatcaa 4099992  T
Q  576 tcaatttgaaaagcta-ttcattgaaagaat 605  Q
    |||||||||||||||| ||||||||||||||    
T  4099993 tcaatttgaaaagctatttcattgaaagaat 4100023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 398 - 609
Target Start/End: Original strand, 11672429 - 11672645
Alignment:
Q  398 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 495  Q
    ||||||| |||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  11672429 cgggcctttaacgaaaaattaaatctaatatccaccccccacttaaataaaaaatatatatgttatatcattttctttctttagtacacatttgagtttt 11672528  T
Q  496 aatctagactctagttcttctttttgt--atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-t 592  Q
      |||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| || |    
T  11672529 tttctagactctagttctcctttttgtacatataaatcggatcctatcaaaccactcctaatttgtataatcacttaatcagtcaatttggaaagttatt 11672628  T
Q  593 tcattgaaagaatcaca 609  Q
    ||| |||||||||||||    
T  11672629 tcaatgaaagaatcaca 11672645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 343 - 609
Target Start/End: Complemental strand, 44894306 - 44894034
Alignment:
Q  343 ggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatac----ccacccc--a 436  Q
    |||||| |||||||| ||| |||| || ||||| ||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    |||||||  |    
T  44894306 ggcccgaccttgaggatgtacaagatgctcaaccaggtcgggcctccaaatgctacggatctctaagaaaaaattaaatctaatacatacccacccctca 44894207  T
Q  437 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 536  Q
    |||||||||||||||||||||||||||| || | |  |||||||||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||    
T  44894206 tttaaataaaaaatatatatgttatatctttatatc-ctttagtacacgtttgagtttttttctagactatagttcttctttttgtacataaatcggatc 44894108  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||    
T  44894107 ctattaaaccacccctaatttgtataatcacttaatcaatcaatttggaaagctattttattgaaagaatcaca 44894034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 342 - 609
Target Start/End: Complemental strand, 6380359 - 6380089
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--tt 439  Q
    ||||||||| ||||||| | |||||||| | ||| |||||||||||||||||   || |||||| ||| ||||||||| ||||||| |||| || |  ||    
T  6380359 aggcccggctttgagggagcgcaaggtgcttaaccaggccgggcctccaaataccacaggcctcaaacaaaaaattaagtctaatatccactccctactt 6380260  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||||||| || |||| ||||||    
T  6380259 aaataaaaaa-atatatgttatatcattttatttctttagtacacgtttgagttttttttctagactctagttcttctttttgtacatgaatctgatcct 6380161  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||  ||| ||||||||||||||||||    
T  6380160 atcaaaccacccctaatttgtataatcacttaatcaatcaatttggaagtctatttcattgaaagaatcaca 6380089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 339 - 520
Target Start/End: Original strand, 38524971 - 38525154
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 436  Q
    ||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  | |||    
T  38524971 ttcagacccggctttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacgaaaaattaaatctaatacccactctcca 38525070  T
Q  437 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt 520  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| || |||||    
T  38525071 cttaaataaaaaatatatatgttatatctttttctttctttagtacacgtttgagtttttttctagactctagttttttttttt 38525154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 347 - 537
Target Start/End: Complemental strand, 12251657 - 12251466
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaata 444  Q
    ||||||||||||||||||||||  ||||  ||||||| |||||||||| |||| ||||||| | ||||||||||||||||||||||||  || |||||||    
T  12251657 cggccttgagggtgtgcaaggtactcaatcaggccggacctccaaatgctacgagcctctatcaaaaaattaaatctaatacccaccctccacttaaata 12251558  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  12251557 aaaaatatatatgttatctcattttctttctttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcc 12251466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 411 - 606
Target Start/End: Complemental strand, 7636536 - 7636334
Alignment:
Q  411 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-----ctaga 503  Q
    ||||||||| ||||| |||||||  ||| |||||||||||| |||| ||||||||| |||||||| ||  |||||||||| |||||   |     |||||    
T  7636536 aaaaattaagtctaacacccacctcccacttaaataaaaaa-atatgtgttatatctttttcttttttcggtacacgtttaagtttttttttcttctaga 7636438  T
Q  504 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaag 602  Q
    ||||| |||| | ||||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  7636437 ctctacttctcccttttgtacataactctgatcctatcaaaccacccctaatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaag 7636338  T
Q  603 aatc 606  Q
    ||||    
T  7636337 aatc 7636334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 26282802 - 26282547
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-att 438  Q
    ||||||||||||||||||| |||||||||  ||||  | |||||||||||||| | ||  ||||||  |  ||||||||| ||||||||||||||| | |    
T  26282802 tcaggcccggccttgagggagtgcaaggtactcaatcaagccgggcctccaaaagctataggcctcaga--aaaaattaactctaatacccacccccact 26282705  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    ||||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | ||    
T  26282704 taaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctgcacataaatctggtact 26282619  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26282618 atcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 26282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 347 - 609
Target Start/End: Complemental strand, 40001948 - 40001701
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataa 445  Q
    |||||||||| | |||||||||| |||| || |||||||||||||| | || ||||||  ||   |||||||| ||||||||||||||| | ||||||||    
T  40001948 cggccttgagagagtgcaaggtgctcaattaagccgggcctccaaaagctatgggcctaaaa---aaaattaactctaatacccacccctacttaaataa 40001852  T
Q  446 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||||||||||||||           |||||||   |||||||||| ||   |||||||| |||||||||| | || | ||||||| | | ||||||||     
T  40001851 aaaatatatatgttac----------ttcttta---cacgtttgaggtttt-tctagactttagttcttctatctgaacataaatctggtactatcaaac 40001766  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40001765 cacctccaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 40001701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 27432380 - 27432476
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccca 436  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27432380 tcaggcccgaccttgagggtgtgtaaggtgctcaaccaggcccggccttcaaatgctacgggcctctaacgaaaaattaaatttaatacccacccca 27432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 609
Target Start/End: Original strand, 32956670 - 32956834
Alignment:
Q  446 aaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaat 545  Q
    |||| ||||||||||  || |||||||||||  ||||||||||||||||   | |||||||||||||| |||| || | ||||||| ||| ||||||||     
T  32956670 aaaaaatatatgttacttctttttctttcttcggtacacgtttgagtttttttttagactctagttctcctttctggacataaatctgatgctatcaaac 32956769  T
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||| |||||||| |||||||||||||||  |||| || ||||||||||||||||||    
T  32956770 cacccccaatttttataatcatttaatcagtcaatttataaagttatttcattgaaagaatcaca 32956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 345 - 604
Target Start/End: Original strand, 25061697 - 25061957
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaa 442  Q
    |||| ||||| ||| |||||||||| ||||| | ||||| ||||||||| ||| ||||||  ||  ||||||||| ||||||| ||||||| |  |||||    
T  25061697 cccgaccttgggggagtgcaaggtgctcaaccaagccggacctccaaatattatgggcctaaaaa-aaaaattaagtctaatatccaccccctacttaaa 25061795  T
Q  443 taaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatc 541  Q
    ||||||| | | |||||||  || |||||||||||  |||||||||| | |||   | |||||||||||||||||||||| | ||||||| ||| |||||    
T  25061796 taaaaaaaaaaatatgttacttctttttctttcttcggtacacgttttaatttt--tttagactctagttcttctttttggacataaatctgatgctatc 25061893  T
Q  542 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 604  Q
    |||  |  |  |||||||| |||||||| |||||| |||||||||||||| |||||||||||||    
T  25061894 aaactattctcaatttgtacaatcactttatcagttaatttgaaaagctatttcattgaaagaa 25061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 413 - 609
Target Start/End: Original strand, 26633227 - 26633422
Alignment:
Q  413 aaattaaatctaatacccaccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttc 512  Q
    ||||||| | ||||||||||||||  | ||  |||||| || ||||||  || |||||||||||  |||||||| |||||||   |||||||||||||||    
T  26633227 aaattaagtataatacccaccccaacttaaagaaaaat-tacatgttacttctttttctttcttcggtacacgtatgagttttt-tctagactctagttc 26633324  T
Q  513 ttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | |||| || | ||||||  ||| |||| ||| ||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26633325 tactttctggacataaatttgatgctataaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 26633422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 525 - 609
Target Start/End: Complemental strand, 773974 - 773889
Alignment:
Q  525 ataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||    
T  773974 ataaatctgatgctatcaaatcacccctaatttgtataattactttatcagtcaatttgaaaagctattttattgaaagaatcaca 773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 437 - 609
Target Start/End: Original strand, 41908064 - 41908237
Alignment:
Q  437 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggat 535  Q
    ||||||||||||| | ||||||||  || |||||||||||  ||||| ||||||||||   ||| |||||| |||||  ||||| | | ||||||| |||    
T  41908064 tttaaataaaaaaaa-atatgttacttctttttctttcttcggtacatgtttgagtttttttcttgactctggttctcattttttggacataaatctgat 41908162  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcaca 609  Q
     || ||||| |||| | |||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  41908163 gctttcaaaccacctccaatttgtacaatcacttaatcagtcaattagaaaagctgtttcattgaaagaatcaca 41908237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 609
Target Start/End: Complemental strand, 12251365 - 12251293
Alignment:
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  12251365 tatcaaaccacccctaatttctataatcatttaatcagtcaatttggaaagctatttcattgaaagaatcaca 12251293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 466 - 609
Target Start/End: Original strand, 30739038 - 30739182
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||||||| ||  ||||||||||||||||   |||||| || | |||| |||| || | ||||||||||| |||||||| || |   ||||| |||||||    
T  30739038 ttttcttttttcggtacacgtttgagtttttttctagattccaattctcctttctggacataaatcggatgctatcaaaccatcttcaatttttataatc 30739137  T
Q  566 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||| || |||||| |||||||||||    
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcaca 30739182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 44877070 - 44877006
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcct 404  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||    
T  44877070 tcaggcccggccttgagggagtgcaaggtgctctactaggccgggccttcaaatgttacgggcct 44877006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 36438468 - 36438356
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    ||||| |||||||||| |||| || | ||||||  ||| |||||||| |||    ||||||||||||||||||||||||||||||||||| | | |||||    
T  36438468 tctaggctctagttctactttctggacataaatttgatgctatcaaaccactatcaatttgtataatcacttaatcagtcaatttgaaaaaccatttcat 36438369  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  36438368 tgaaagaatcaca 36438356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 40738108 - 40737996
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||| ||||||||||| ||||||  | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||||||| || ||    
T  40738108 tctaaactctagttctacttttttgacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaagctattttat 40738009  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  40738008 tgaaagaatcaca 40737996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 609
Target Start/End: Original strand, 1365821 - 1366068
Alignment:
Q  348 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaata-aa 446  Q
    ||||||||||| |||||||||| ||||  | ||||||||||||||   || |||||||  |  ||||||||| |||||||||||||||| ||||||| ||    
T  1365821 ggccttgagggagtgcaaggtgctcaatcaagccgggcctccaaaatctatgggcctccga--aaaaattaactctaatacccaccccacttaaatataa 1365918  T
Q  447 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 546  Q
    ||||||||||||||       |||||       |||||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||||||| |    
T  1365919 aaatatatatgtta------cttctt-------tacacgtttgagttt-cttctagactttagttctcctatctggacataaatttggtactatcaaacc 1366004  T
Q  547 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||  | |||| ||||||| ||||||||||||||||||||||| || ||||| ||||||||||||    
T  1366005 actaccaattggtataatgacttaatcagtcaatttgaaaagttatttcatagaaagaatcaca 1366068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 9479074 - 9479186
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||| ||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||| ||||||||||||||||| |||| ||| ||| |    
T  9479074 tctaaactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtataattacttaatcagtcaatttaaaaaactatttcgt 9479173  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  9479174 tgaaagaatcaca 9479186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 18895460 - 18895402
Alignment:
Q  552 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||    
T  18895460 taatttgtataatcaattaatcagtcaatttaaaaagttatttcattgaaagaatcaca 18895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 554 - 609
Target Start/End: Original strand, 42312012 - 42312068
Alignment:
Q  554 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||| || |||||||||||||||||| |||||| |||||||||||    
T  42312012 atttgtataatcacttgattagtcaatttgaaaagctatttcattaaaagaatcaca 42312068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 571
Target Start/End: Complemental strand, 40841491 - 40841289
Alignment:
Q  371 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaa---aatatatatgttatatca 465  Q
    ||||||| |||||||||||||||  || ||||||  ||   |||||||| | ||||||||||  |||| | ||||||||   || |||||||||   ||     
T  40841491 tcaactaagccgggcctccaaatactatgggcctaaaa---aaaattaagtttaatacccacaccccactgaaataaaataaaaaatatatgtttcttct 40841395  T
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc-cctaatttgtataat 564  Q
    ||||||||||| |||||| ||||||||||   ||||||||||| || ||||||||| | ||||||  |||  ||||||| |||| |||||||||||||||    
T  40841394 ttttctttcttcagtacatgtttgagttt-tttctagactctaattattctttttggacataaatatgatgttatcaaaccacctcctaatttgtataat 40841296  T
Q  565 cacttaa 571  Q
     ||||||    
T  40841295 tacttaa 40841289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 460
Target Start/End: Original strand, 25609964 - 25610014
Alignment:
Q  411 aaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgtta 460  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  25609964 aaaaattaactctaatacccacctccatttaaataaaaaatatgtatgtta 25610014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 11672387 - 11672423
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaac 375  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11672387 ttcaggcccggccttgagggtgtgcaaggtgctcaac 11672423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 375
Target Start/End: Original strand, 4099740 - 4099775
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaac 375  Q
    |||||||||||||||||||||||||||||| |||||    
T  4099740 tcaggcccggccttgagggtgtgcaaggtgctcaac 4099775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 2e-97; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 32131065 - 32130795
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||||||||||||||||| |||||| ||||| |||| ||||||||||||| |||| || ||| ||||||||||||||||||||||||||||  | |    
T  32131065 caggcccggccttgagggtgtgtaaggtgttcaaccaggctgggcctccaaatgctacgagcttctcacgaaaaattaaatctaatacccaccccccact 32130966  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||||||||||||||| ||||||||||||||    
T  32130965 taaataaaaaatatatatgttatatcattttctttctttagtacccgtttgagttttt-tctagacactagttcttctttttgtacataaatcggatcct 32130867  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  32130866 atcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaca 32130795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 28463865 - 28463593
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    ||||||||||| |||| ||||||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |     
T  28463865 tcaggcccggctttgaaggtgtgcaaggtgttcaatcaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccac 28463766  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| ||||||||||||     
T  28463765 ttaaataaaaaatatatatgttatatccttttctttctttagtaaacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatct 28463666  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||    
T  28463665 tatcaaaccacccctaatttgtataatcacttaatcaatcaagttgaaaagctatttcattgaaaaaatcaca 28463593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 53011503 - 53011771
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 437  Q
    |||||||| ||||||||||||||||||||| ||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||    
T  53011503 tcaggcccagccttgagggtgtgcaaggtgctcaaccagaccgg-cctccaaatgctacgggcctctaacgaaaaattaaatctaatacccatcccccat 53011601  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   |||| |||||| |||| ||||||||| ||||||| |||||    
T  53011602 ttaaataaaaaatatat--gttatatcattttctttctttagtacacgtttgagttttt-tctaaactctaattctcctttttgtacataaatcagatcc 53011698  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  53011699 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattaaaagaatcaca 53011771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 19661169 - 19661438
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 438  Q
    ||||||| ||||||||||||||||||||| ||||| |||| |||||| |||||| || ||| ||||||||||||||||||| |||||||||  ||||| |    
T  19661169 caggccccgccttgagggtgtgcaaggtgctcaaccaggc-gggccttcaaatgctatgggtctctaacgaaaaattaaatttaatacccatcccccact 19661267  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||| ||||||||||||||    
T  19661268 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcatttttgtacataaatcggatcct 19661366  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    
T  19661367 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaaacaca 19661438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 340 - 582
Target Start/End: Original strand, 21168844 - 21169088
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat-- 437  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||| |||||||||       
T  21168844 tcaggcccggccttgagggtatgcaaggtgctcaaccaggccggatctccaaatgatacgggcctctaacgaaaaattaaatctaatgcccaccccacac 21168943  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  21168944 ttaaataaaaaatatatatgttataaccttttctttcttttgtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcc 21169043  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaattt 582  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||    
T  21169044 tatcaaatcacccctaatttgtataatcaattaatgagtcaattt 21169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 352 - 609
Target Start/End: Complemental strand, 11682008 - 11681747
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 449  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11682008 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11681909  T
Q  450 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 548  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11681908 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11681809  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  11681808 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcaca 11681747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 352 - 609
Target Start/End: Complemental strand, 11690287 - 11690026
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaataaaaaa 449  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  11690287 ttgagggtgtgcaaggtgctcaaccaggccgggccttcaaatgctacgagcctctaacgaaaaattaaatctaatacccaccccccacttaaataaaaaa 11690188  T
Q  450 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttc-tttttgtatataaatcggatcctatcaaatcac 548  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||   |||||||||||||||| | ||||| || |||||||||||||||||||| |||    
T  11690187 tatatatattatattcttttctttctttagtacacgtttgagtttttttctagactctagttctccttttttttacataaatcggatcctatcaaaccac 11690088  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  11690087 ccctaatttttataatcacttaatcagtcaatttggaaagttatttcattgaaagaatcaca 11690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 342 - 609
Target Start/End: Original strand, 41038038 - 41038309
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 439  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||  ||||    
T  41038038 aggcccggccttgagggtgtgcaagatgctcaaccaggccgggcctccaaatgatacggtc-tctaacgaaaaattaaatctaatatccaccccccattt 41038136  T
Q  440 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttcttttt-gtatataaatcggatcc 537  Q
    |||||||||| ||||||| ||||||| ||||  |||||||||||||||||||||||   |||||||||||||| || ||||| ||| |||||||| ||||    
T  41038137 aaataaaaaaatatatatattatatcttttttattctttagtacacgtttgagtttttttctagactctagttttttttttttgtacataaatcgaatcc 41038236  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  41038237 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcaca 41038309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 44477827 - 44478098
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||||||||||||||||| |||||| ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||  |||    
T  44477827 caggcccggccttgagggtgtgtaaggtgttcaaccaggtcgggcctccaaatattacggacctctaacgaaaaat-aaatctaatatccacccctcatt 44477925  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagac-tctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||| || ||||||| |  |||||||| ||||||| |||||    
T  44477926 taaataaaaaatatatatgttatatcattttatttctttagtacacgtttgagtttttttctaaacttctagttatcatttttgtacataaatcagatcc 44478025  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  44478026 tatcaaaccacccataatttgtataatcactaaatcagtcaatttggaaagctatttcattgaaagaatcaca 44478098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 23426436 - 23426171
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattt 439  Q
    ||||||||| |||||||| ||  ||||||| |||||||||| || |||| ||||  |||||||||||||||||||||||||||||||||||||||| |      
T  23426436 tcaggcccgaccttgaggatg--caaggtgctcaactaggctggacctcgaaatactacgggcctctaacgaaaaattaaatctaatacccaccccct-- 23426341  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
     | | ||| |||||||||||||||  |||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||| |||||||||||||||    
T  23426340 -acttaaatatatatatgttatatacttttctttctttagtatacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatccta 23426242  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  23426241 tcaaaccacctctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 23426171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 345 - 609
Target Start/End: Original strand, 27632194 - 27632457
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 442  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||  ||  ||| |||||  ||||||||||  ||||  |||||    
T  27632194 cccgaccttgagggagtgcaaggtgctcaactaggccgggcctccaaatgctacgggcctaaaa--aaatattaagactaatacccatccccctgttaaa 27632291  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||| ||||  ||||||| |||||||||||| |||||||||||||||||   |||||| ||||||||| ||||||||| ||||||  ||||||||||    
T  27632292 taaaaaaaatat--gttatataattttctttcttcagtacacgtttgagtttttttctagattctagttctcctttttgtacataaatttgatcctatca 27632389  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27632390 aaccacccctaatttgtataatcacttaattagtcaatttgaaaagctacttcattgaaagaatcaca 27632457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 352 - 609
Target Start/End: Original strand, 23256394 - 23256653
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaa- 449  Q
    |||||||||||||||||| ||||  ||||||  ||||||||||||| ||| || |||||||||||||||| ||||| ||||||| | ||||| ||||||     
T  23256394 ttgagggtgtgcaaggtgctcaatcaggccgaacctccaaatgttatgggtctttaacgaaaaattaaatataatatccacccccacttaaacaaaaaaa 23256493  T
Q  450 -tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 548  Q
     ||||||||||||||| ||||||||||| ||||||| |||||||||   | ||||||| |||||| ||||||||| |||||||||||||||||||| |||    
T  23256494 atatatatgttatatccttttctttctt-agtacacatttgagttttttt-tagactccagttctcctttttgtacataaatcggatcctatcaaaccac 23256591  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||| ||||||||||||||||||  ||||||| |||| |||||||||||||    
T  23256592 ccctaatttgtataaccacttaatcagtcaatttagaaagctatttcaatgaaagaatcaca 23256653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 29221900 - 29221626
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    ||||||||||||||| ||| |||||||||| |||||  | | |||||||||||||  | ||||||| ||| ||||||||| | |||||||||||||  |     
T  29221900 tcaggcccggccttgtgggagtgcaaggtgctcaaccggactgggcctccaaatgccatgggcctcaaacaaaaaattaagtttaatacccaccccccac 29221801  T
Q  438 ttaaataaaaaa--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 535  Q
    ||||||||||||  ||||||||||||||| ||||||||||| | | |||||||||||||   ||||||||||| ||||  |||||||| ||||||| |||    
T  29221800 ttaaataaaaaaaatatatatgttatatccttttctttcttcatttcacgtttgagtttttttctagactctaattctcgtttttgtacataaatctgat 29221701  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||| | |||||||||||||||||||| | ||||||||| ||  ||| ||||||||| ||||||||    
T  29221700 cctatcaaaccactcttaatttgtataatcacttaaacggtcaatttggaagtctatttcattgaaggaatcaca 29221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 455 - 593
Target Start/End: Original strand, 16072498 - 16072636
Alignment:
Q  455 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 554  Q
    ||||||||||||||||||||||  ||||||||||||||||   ||||  |||||| ||| ||||||||| ||||||  |||||||||||| || ||||||    
T  16072498 atgttatatcattttctttcttcggtacacgtttgagtttttttctaagctctagatctcctttttgtacataaatttgatcctatcaaaccatccctaa 16072597  T
Q  555 tttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  16072598 tttgtataatcatttaatcagtcaatttgaaaaactatt 16072636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 341 - 461
Target Start/End: Complemental strand, 39372936 - 39372815
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 438  Q
    |||||||||| |||||||||||||||||| ||||| ||||||| |||||||||  ||||||||| |||||||||||||||||||||| |||||  ||| |    
T  39372936 caggcccggc-ttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctttaacgaaaaattaaatctaatatccacccgccact 39372838  T
Q  439 taaataaaaaatatatatgttat 461  Q
    |||||||||||||||||||||||    
T  39372837 taaataaaaaatatatatgttat 39372815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 29579827 - 29579939
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||| | |||||||||||| ||||||||||| ||||     
T  29579827 tctagactctagttctattttttgtacataaatctgatcctatcaaaccacccataatttgtataattaattaatcagtcaaattgaaaagctatttcaa 29579926  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  29579927 tgaaagaatcaca 29579939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 45172903 - 45172650
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||| ||||||||||||| |||||||||| ||||  | ||||| ||| |||| |||| | ||||| ||  ||||||||||||||||| ||||||| | ||    
T  45172903 caggtccggccttgagggagtgcaaggtgctcaatcaagccggacctacaaaagttatgtgcctcaaa--aaaaattaaatctaatatccacccccactt 45172806  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| |  | || | ||||||| | | |||    
T  45172805 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctccaatctggacataaatctggtacta 45172720  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  45172719 tcaaaccaccc-taatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcaca 45172650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 34982029 - 34982283
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||| ||||||||| |||||| ||| ||||  | |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||| | ||    
T  34982029 caggcccgaccttgagggagtgcaatgtgctcaatcaagccgggcctccaaaagctatgggcctc--agaaaaaattaaatctaatacccacccctactt 34982126  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||       |||||       |||||||||||||||   |||||||| ||||| |||| | || | ||||||| | | |||    
T  34982127 aaataaaaaatatatatgtta------cttctt-------tacacgtttgagttt-tttctagactttagtttttctatctggacataaatctggtacta 34982212  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     |||| || ||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||    
T  34982213 acaaaccatccccaatttgtataatcacttaatcagtcaattggaaaaactatttcgttgaaagaatcaca 34982283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 449 - 609
Target Start/End: Complemental strand, 21791712 - 21791552
Alignment:
Q  449 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 548  Q
    ||||||||||||  || ||||||||| | |||||| ||||||||||   |||||||||||||||| |||| || | ||||||  ||| | |||||| |||    
T  21791712 atatatatgttacttctttttctttcatcagtacatgtttgagttttt-tctagactctagttctcctttctgaacataaatttgatgccatcaaaccac 21791614  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |   ||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21791613 cttcaatgtgtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcaca 21791552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 35654097 - 35653985
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  35654097 tctagactctagttctactttctggacataaatatgatgctatcaaaccaccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcat 35653998  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  35653997 tgaaagaatcaca 35653985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 466 - 609
Target Start/End: Complemental strand, 43154936 - 43154793
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||||||||||||| |||||| |||||||   |||||| ||||||||| ||||||| | ||||||  ||| |||||||| ||||   |||||||||||||    
T  43154936 ttttctttctttaggacacgtatgagttttt-tctagattctagttctactttttggacataaatttgatgctatcaaaccaccatcaatttgtataatc 43154838  T
Q  566 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||| ||||| || |||||| |||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcaca 43154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 341 - 494
Target Start/End: Complemental strand, 51066862 - 51066707
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 438  Q
    |||| ||||| ||||||| |||||||||  || || ||||||| |||| |||||||||||||||| ||| ||||||||| ||||||| |||  |||||||    
T  51066862 caggtccggctttgagggagtgcaaggttctctaccaggccggacctctaaatgttacgggcctcaaacaaaaaattaagtctaatatccactccccatt 51066763  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 494  Q
    ||||||||| | ||||||||||  |  |||||| |||| || ||||||||||||||    
T  51066762 taaataaaagaaatatatgttacttttttttctctcttcagcacacgtttgagttt 51066707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 466 - 607
Target Start/End: Original strand, 22423600 - 22423741
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||| ||||||| |||||||| |||||||   |||||||||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||| |||    
T  22423600 ttttttttctttggtacacgtatgagttttt-tctagactctagttctactttctggacataaatttgatgctatcaaaccaccatcaatttgtatgatc 22423698  T
Q  566 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 607  Q
    ||||||||| |||||||||||| ||| || |||||||||||||    
T  22423699 acttaatcaatcaatttgaaaaactattttattgaaagaatca 22423741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 5545276 - 5545388
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    ||||||||||| ||||||| | || | ||||||  ||| | |||||| |||| | ||||||||||||||||||||| ||||||||| ||||||| |||||    
T  5545276 tctagactctaattcttctgtctggacataaatttgatgccatcaaaccaccaccaatttgtataatcacttaatcggtcaatttggaaagctatttcat 5545375  T
Q  597 tgaaagaatcaca 609  Q
    | |||||||||||    
T  5545376 taaaagaatcaca 5545388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 593
Target Start/End: Original strand, 24449040 - 24449168
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct--aatttgtataa 563  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||| |||| || ||||||||  ||| |||||||| |||      |||||||||||    
T  24449040 ttttctttcttcagtacacgtatgagttttt-tctagactctagttctactttctggatataaatttgatgctatcaaaccactatatcaatttgtataa 24449138  T
Q  564 tcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||| ||||||||||||| |||||    
T  24449139 tcacttaatcggtcaatttgaaaaactatt 24449168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 469
Target Start/End: Original strand, 29579655 - 29579766
Alignment:
Q  360 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatg 457  Q
    |||||| ||| ||||  ||||||| |||||||||| |||||| ||| ||| ||||||||| |||||| | ||||||  | |||||||||||| |||||||    
T  29579655 gtgcaaagtgctcaatcaggccggacctccaaatgctacgggtctcaaacaaaaaattaagtctaatgctcaccccccacttaaataaaaaaaatatatg 29579754  T
Q  458 ttatatcatttt 469  Q
    ||||||| ||||    
T  29579755 ttatatcctttt 29579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 494
Target Start/End: Complemental strand, 48512393 - 48512342
Alignment:
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagttt 494  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  48512393 taaaaaaaatatatgttatttctttttctttctttagtacacgtttgagttt 48512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 55134210 - 55134267
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  55134210 aattggtataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcaca 55134267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 582
Target Start/End: Complemental strand, 26329233 - 26329065
Alignment:
Q  413 aaattaaatctaatacc-caccccatttaaataaa-aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagt 510  Q
    ||||||| |||||| || ||||||| ||||||||| ||| ||||||||||  || |||||||||||| |||||||||||| |||   |||||||| || |    
T  26329233 aaattaagtctaatgccacaccccacttaaataaataaaaatatatgttacttctttttctttctttggtacacgtttgaattt-tttctagactgtaat 26329135  T
Q  511 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaattt 582  Q
    ||| |  |||| | ||||||| ||| ||| |||| |||| | ||||| |||||||| | |||||||||||||    
T  26329134 tctcc--tttggacataaatctgatgctaccaaaccacctccaatttatataatcattcaatcagtcaattt 26329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 10575601 - 10575528
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| |||||  || |||||||||||||||||||||||||||  |||| || |||||||||| |||||||    
T  10575601 ctatcaaaccaccctcaacttgtataatcacttaatcagtcaatttagaaagttatttcattgaaataatcaca 10575528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 2e-97; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 345 - 609
Target Start/End: Complemental strand, 19367690 - 19367424
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 442  Q
    |||||| |||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||||||||||| |||||||||||||| |  |||||||||||    
T  19367690 cccggctttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaa-ttaaatctaatacctatcccccatttaaa 19367592  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  19367591 taaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggattctatca 19367492  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19367491 aaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 19367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 26152022 - 26151752
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||||    
T  26152022 caggcccggccttgagggtgtgcaagatgctcaaccaggtcgggcctccaaatgctacgggtctctaacgaaaaat-aaatctaatacccacccccattt 26151924  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatcct 538  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| ||||||||||||||    
T  26151923 aaataaaaaatatatatgttatatccttttctttctttagtatacgtttgagtttttttctagacttctagttctcctttttgtacataaatcggatcct 26151824  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  26151823 atcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 26151752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 349 - 609
Target Start/End: Complemental strand, 18676579 - 18676316
Alignment:
Q  349 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaa 446  Q
    |||||||| |||||||||||| ||||| ||||||||| |||||||| ||||||  ||||||||||||||||||||||||||||||||  | |||||||||    
T  18676579 gccttgagagtgtgcaaggtgctcaaccaggccgggcatccaaatgctacgggtttctaacgaaaaattaaatctaatacccacccctcacttaaataaa 18676480  T
Q  447 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||||||||      
T  18676479 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaact 18676380  T
Q  547 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  18676379 acccctaatttgtataataacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 18676316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 13020210 - 13020482
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||| | ||    
T  13020210 caggcccggccttgagggtgtgcaaggtgctcaaccagggcgggcctccaattgctacgggcctctaacgaaaaattaaatttaatacccacccccactt 13020309  T
Q  440 aaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 537  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   | |||||||||||||||  |||||||| |||||||||||||    
T  13020310 aaataaaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctcttttttgtacataaatcggatcc 13020409  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  13020410 tatcaaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcatttaaagaatcaca 13020482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 339 - 609
Target Start/End: Complemental strand, 42411835 - 42411563
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 436  Q
    |||||||||||| |||||||||||||||||| ||||  ||||||||||||||| || || | |||||||||||||||||||||||||||||||  |||||    
T  42411835 ttcaggcccggcattgagggtgtgcaaggtgctcaatcaggccgggcctccaattgctaagagcctctaacgaaaaattaaatctaatacccaaccccca 42411736  T
Q  437 tttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 536  Q
     ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||    
T  42411735 cttaaaaaaaatatatatatgttatatccttttctttctttagtacacgtttgagttttt-tctagactctagttctcctttttgtacataaatcggatc 42411637  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  42411636 ctatcaaaccacccctaatttgtataatcacttaattagtcaatttggaaagctatttcatttaaagaatcaca 42411563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 349 - 609
Target Start/End: Original strand, 25222119 - 25222382
Alignment:
Q  349 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaataaa 446  Q
    ||||||||||| || |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| | |  |||||||||    
T  25222119 gccttgagggtatgaaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaataccgaccgcctacttaaataaa 25222218  T
Q  447 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  25222219 aaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactttagttctcctttttgtacataaatcggatcctatcaaatc 25222318  T
Q  547 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |  ||||||||||||||||||||||| |||||||||  |||| || ||||||||||||||||||    
T  25222319 attcctaatttgtataatcacttaattagtcaatttagaaagttatttcattgaaagaatcaca 25222382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 41096816 - 41096543
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    ||||||||| |||||| ||||||||||||  ||||  ||||||| |||| ||||| |||||| ||||||||||||||||||| |||||||||||||  |     
T  41096816 tcaggcccgaccttgaaggtgtgcaaggtactcaatcaggccggacctctaaatgctacgggtctctaacgaaaaattaaatttaatacccaccccccac 41096717  T
Q  438 ttaaataaaaa-atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||||| ||||    
T  41096716 ttaaataaaaatatatatatgttatatccttttctttctttagtacacatttgagtttttttctagactctagttctcctttttgtacataaatcagatc 41096617  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  41096616 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaaactatttcattgaaagaatcaca 41096543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 45618765 - 45619035
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||||  |||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||    
T  45618765 caggcccaaccttgagggtgtgcaaggtgctcagccaggccgggcctccaaatgctacgggcctctaacgaaaaat-aaatctaatacccaccccccatt 45618863  T
Q  439 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact-ctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||| ||||||||||||    
T  45618864 taaataaaaaaatatatatgttatatccttttctttctttagtatacgtttgagttttt-tctagacttctagttctcctttttgtacataaatcggatc 45618962  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  45618963 ctatcaaaccacccctaatttgtataatcacttaatcagtcaatttg-gaagctatttcattgaaagaatcaca 45619035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 7993421 - 7993691
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    ||||| ||||| |||||||||||||||||| ||||   | ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||  ||    
T  7993421 tcaggtccggctttgagggtgtgcaaggtgctcaatctgaccgggcctccaaatgctacag-cctctaacgaaaaattaaatttaatacccaccccctat 7993519  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| ||||| |||||||    
T  7993520 ttaaataaaaaatatatatgttatatccttttctttctttagtacacatttgagttttt-tctagactctagttctcctttttgtacataaaccggatcc 7993618  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  7993619 tatcaaaccacccctaatttgtataatcacttaatcagccaatttggaaagctatttcattgaaagaatcaca 7993691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 348 - 609
Target Start/End: Original strand, 6530455 - 6530718
Alignment:
Q  348 ggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaa 446  Q
    ||||||||||||||| |||||| ||||| || |||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  6530455 ggccttgagggtgtgtaaggtgctcaacgagaccggacctctaaatgatacgggcctctaacgaaaaattaaatctaatatccacccccacttaaataaa 6530554  T
Q  447 aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 546  Q
    ||||||||| |||||||| |||||||||||||||| | |||| |||||   ||||||||||||||||  |||||||| ||||||||||| |||||||| |    
T  6530555 aaatatatacgttatatccttttctttctttagtagatgtttaagtttttttctagactctagttctcatttttgtacataaatcggatactatcaaacc 6530654  T
Q  547 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  6530655 acccctaatttgtataatcacttaatcagtcaatttgaaaaggtatttcattgaaagaatcaca 6530718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 341 - 566
Target Start/End: Complemental strand, 42760023 - 42759797
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 440  Q
    |||| |||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||    
T  42760023 caggtccggccttgagggtgtacaaggtgctcaactaggtcgggcctccaaatgctacaggcctctaacgaaaaattaaatctaatatccaccccactta 42759924  T
Q  441 aataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||| ||    
T  42759923 aataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttttagactctagttctcctttttgtacataaatcggatcata 42759824  T
Q  540 tcaaatcacccctaatttgtataatca 566  Q
    ||||| ||||| |||||| ||||||||    
T  42759823 tcaaaccacccataatttttataatca 42759797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 338 - 572
Target Start/End: Original strand, 36481191 - 36481425
Alignment:
Q  338 cttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccc 435  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  36481191 cttcaggcccggtcttgagggtgtgcaaggtgctcaaccaggccggacctccaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccc 36481290  T
Q  436 atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggat 535  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||| |||| ||||||||| |||||| ||||    
T  36481291 acttaaataaaaaatatatatgttatatcattttctttc-ttagtacacatttgagttt-cttttagactctaattctcctttttgtacataaattggat 36481388  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaat 572  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  36481389 cctttcaaaccacccctaatttgtataatcacttaat 36481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 4855777 - 4856052
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 437  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||  ||||    
T  4855777 tcaggcctggccttgagggtgtgcaaggtgctcaaccaggccggacctccaaattctacgggcctctaacgaaaaa-taaatctaatacccaccctccat 4855875  T
Q  438 ttaaat-aaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctaga-ctctagttcttctttttgt-atataaatcgg 533  Q
    |||||| |||||||||||||||||||||  ||||||||||| ||||||||||||| |||   ||||||  | ||||||| |||||||| | ||||||| |    
T  4855876 ttaaataaaaaaatatatatgttatatccctttctttctttcgtacacgtttgagttttttttctagatttttagttctcctttttgtaacataaatcag 4855975  T
Q  534 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  4855976 atcctatcaaaccacccctaatttgtataatcacttaatcagtgaatttggaaagctatttcattgaaagaatcaca 4856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 352 - 583
Target Start/End: Original strand, 45042187 - 45042421
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 449  Q
    ||||||| | |||||||| ||||  ||| ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||| ||  ||||||||||||||    
T  45042187 ttgagggagcgcaaggtgctcaatcaggtcgggcctccaaatgttatgggcctcaaacaaaaaattaagtctaatacccactccttatttaaataaaaaa 45042286  T
Q  450 tatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 548  Q
     |||||||| ||||||||||||||||| |||| ||||||||||||   | ||||||||||||||||||||| ||| ||||||  |||||||||||| |||    
T  45042287 aatatatgtcatatcattttctttcttcagtatacgtttgagttttttttctagactctagttcttcttttcgtacataaatttgatcctatcaaaccac 45042386  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttg 583  Q
    |||||||||||||||||||||||||||||||||||    
T  45042387 ccctaatttgtataatcacttaatcagtcaatttg 45042421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 344 - 609
Target Start/End: Original strand, 2063600 - 2063864
Alignment:
Q  344 gcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaat 443  Q
    |||||||| || ||| |||||||||| ||||| || ||||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||| ||||||    
T  2063600 gcccggccctgggggagtgcaaggtgttcaaccagaccgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccacttaaat 2063699  T
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 543  Q
    ||| || | | || ||||||| |||||||||||  ||| ||||||||||||   | |||||||||||| | ||||||||| ||||||   ||||||||||    
T  2063700 aaataaaaaa-atattatatccttttctttcttcggtatacgtttgagttttttt-tagactctagttttcctttttgtacataaatataatcctatcaa 2063797  T
Q  544 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  2063798 accacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 2063864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 405 - 593
Target Start/End: Original strand, 12269279 - 12269466
Alignment:
Q  405 ctaacgaaaaattaaatctaatacccaccccat-ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctaga 503  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||   | ||||    
T  12269279 ctaacgaaaaattaaatctaatatccaccccagcttaaataaaaaatatatatgttatatcattttttttctttagtacacatttgaattttttt-taga 12269377  T
Q  504 ctctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||||||||  |||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||    
T  12269378 ctctagttctcttttttgcacataaatcagatcctatcaaaccacccctaatttgtataatcacttaatcagt-gatttggaaagctatt 12269466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 455 - 609
Target Start/End: Complemental strand, 34062015 - 34061861
Alignment:
Q  455 atgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaa 554  Q
    |||||||||| ||||||||||| ||||||||| |||||||   | |||||| ||||||||||||||||| ||||||| | |||||||||| ||||| |||    
T  34062015 atgttatatctttttctttcttcagtacacgtatgagttttttt-tagactatagttcttctttttgtacataaatctggtcctatcaaaccacccataa 34061917  T
Q  555 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| || |||||||||||||||||| ||||||| ||||||||||||||||||    
T  34061916 tttgtatgattacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 34061861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 15457306 - 15457559
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca-ccccattt 439  Q
    |||||||||||||||| | |||||||||| ||||  | |||||||||||||| |||| |||||||    |||||||||| ||||||||||| ||||| ||    
T  15457306 caggcccggccttgagagagtgcaaggtgctcaatcaagccgggcctccaaaagttatgggcctc---agaaaaattaactctaatacccacccccactt 15457402  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||       |||||       |||||||||||||||   |||||||| ||||||   | |  | | ||||||| | | |||    
T  15457403 aaataaaaaatatatatgtta------cttctt-------tacacgtttgagttt-tttctagactttagttcacttatccggacataaatctggtacta 15457488  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||  ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  15457489 tcaaactacccccaatttgtataatcacttaatcagtcaatttgaaaagctattttattgaaagaatcaca 15457559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 342 - 609
Target Start/End: Complemental strand, 18173197 - 18172945
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attta 440  Q
    ||||||||| ||||||| |||||||||| ||||  | |||||||||||||  | || || ||||  |  ||||||||| ||||||||||||||| | |||    
T  18173197 aggcccggctttgagggagtgcaaggtgctcaatcaagccgggcctccaagagctatggacctcaga--aaaaattaactctaatacccacccccactta 18173100  T
Q  441 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 540  Q
    ||||||||||||||||||||           |||||||   |||||||||||||   |||||||| || |||| || | || | ||||||| | | ||||    
T  18173099 aataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagacttta-ttctcctatatggacataaatctggtactat 18173015  T
Q  541 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  18173014 caaaccacccctaatttgtataatcacttaatcactcaatttgaaaagctatttcatcgaaagaatcaca 18172945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 466 - 605
Target Start/End: Original strand, 39081314 - 39081453
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||| |||||| ||||||||| |||||||   |||||||||||||| | |||| || | ||||||  ||| |||||||| ||||   |||||||||||||    
T  39081314 ttttttttcttcagtacacgtatgagttttt-tctagactctagttttactttctggacataaatttgatgctatcaaaccaccatcaatttgtataatc 39081412  T
Q  566 acttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaat 39081453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 21747347 - 21747235
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 596  Q
    |||||||| |||||||||| | || | ||||||| | | |||||||| |||||| |||||||||||||||||||||||||||||| |||  |||| ||||    
T  21747347 tctagactttagttcttctatctgaacataaatctggtactatcaaaccacccccaatttgtataatcacttaatcagtcaatttaaaatactatgtcat 21747248  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  21747247 tgaaagaatcaca 21747235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 18916313 - 18916059
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||| ||||||||  |||||||||| ||||  | | |||||||||||  | || ||||||  ||  ||||||||| ||||||||||||||| | ||    
T  18916313 caggcccgtccttgaggaagtgcaaggtgctcaatcaagtcgggcctccaatagctatgggcctaaaa--aaaaattaactctaatacccacccccactt 18916216  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||             ||||  |||||||||||| ||   |||||||| |||||||||  | || | ||||||| | | |||    
T  18916215 aaataaaaaatatatatgtta-------------cttttttacacgtttgaggtttt-tctagactttagttcttcaatctggacataaatctggtacta 18916130  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| || ||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  18916129 tcaaaccatccccaatttgtataatcacttaatcaatcaatttgaaaagctatttcactgaaagaatcaca 18916059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 472 - 609
Target Start/End: Original strand, 1418832 - 1418968
Alignment:
Q  472 ttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaa 571  Q
    ||||| ||||||||| |||||||   |||||||||||||||| ||||||  | |||| | | || |||||||| ||||   |||||||||||||||||||    
T  1418832 ttcttcagtacacgtatgagttttt-tctagactctagttctactttttagacataatttg-atgctatcaaaccaccatcaatttgtataatcacttaa 1418929  T
Q  572 tcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  1418930 tcagtcaatttgtaaagctatttcattgaaagaatcaca 1418968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 423 - 607
Target Start/End: Complemental strand, 31273357 - 31273173
Alignment:
Q  423 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttg 521  Q
    ||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||| || |||||||||   | || |||| || ||| |||| ||    
T  31273357 taatacccacccccactcaaataaaaaatatatatgttacatcattttctttctttagtatacatttgagttt-tttgtatactccagctctcctttctg 31273259  T
Q  522 tatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 607  Q
     |  |||||  |||  ||||||| |||||| |||||||||||||| |||||||||||||||| ||  ||| |||||| |||||||||    
T  31273258 gacttaaatttgatgttatcaaaccacccc-aatttgtataatcatttaatcagtcaatttggaatactatttcattaaaagaatca 31273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 27302645 - 27302533
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcat 596  Q
    ||||||||||| ||||||| | || | | ||||  ||| ||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||    
T  27302645 tctagactctaattcttctgtctggacaaaaattcgatgctaccaaatcaccctcaatttgtataatcacttaatcggtcaatttgaaaagctatatcat 27302546  T
Q  597 tgaaagaatcaca 609  Q
    | |||||||||||    
T  27302545 taaaagaatcaca 27302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 432 - 609
Target Start/End: Complemental strand, 36060087 - 36059910
Alignment:
Q  432 ccccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatc 531  Q
    ||||| |||||| |||||  || ||||||  || |||||||||||| |||| ||| | |||||   |||||||||||||||| ||||||  | | ||||     
T  36060087 ccccacttaaattaaaaaattacatgttacttctttttctttctttggtacgcgtataagttttt-tctagactctagttctactttttagacaaaaatt 36059989  T
Q  532 ggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     ||| |||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||    
T  36059988 tgatgctatcaaaccaccatcaatttgtataatcacttaatcagttaatttaaaaagctatttcattgaaagaaccaca 36059910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 38985787 - 38985714
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| |||| | |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  38985787 ctatcaaaccacctccaatttgtataatcatttaatcaatcaatttgaaaagctatttcattgaaagaatcaca 38985714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 607
Target Start/End: Original strand, 38599404 - 38599459
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 607  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  38599404 aatttgtataatcacttaatcaatcaatttgaaaaactatttcattgaaagaatca 38599459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 13997316 - 13997373
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  13997316 aatttgaataatcacttaatgagtcaatttgaaaaactatttcattgaaagaatcaca 13997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 460
Target Start/End: Complemental strand, 17117896 - 17117778
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||||||||||  ||| |||||| ||||  | ||||| ||||||||   || ||||| |  || |||||||||||||||||| |||||| | ||    
T  17117896 caggcccggccttgaggaagtgtaaggtgctcaatcaagccggacctccaaaaactatgggcccc--acaaaaaattaaatctaatactcacccccactt 17117799  T
Q  440 aaataaaaaatatatatgtta 460  Q
    |||||||||||||||||||||    
T  17117798 aaataaaaaatatatatgtta 17117778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 593
Target Start/End: Complemental strand, 1226465 - 1226289
Alignment:
Q  413 aaattaaatctaatacc-caccccatttaaataaaaaa--tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag 509  Q
    ||||||| ||||||||| ||||||| ||||||||||||  |||||||||||  || |||||||      ||||||||||||||||   |||||||||||     
T  1226465 aaattaagtctaataccacaccccacttaaataaaaaaaatatatatgttacttctttttcttcg----gtacacgtttgagttttt-tctagactctaa 1226371  T
Q  510 ttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||| ||||  | | ||||||| ||| ||| |||| |||||  ||||| |||||||||| |||||| |||||||||||| ||||    
T  1226370 ttctccttt--ggacataaatctgatgctaccaaaccaccctcaatttatataatcactcaatcagacaatttgaaaagttatt 1226289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 38985899 - 38985849
Alignment:
Q  411 aaaaattaaatctaataccc-accccatttaaataaaaaatatatatgtta 460  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  38985899 aaaaattaactctaataccccaccccacttaaataaaaaatatatatgtta 38985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 17117691 - 17117650
Alignment:
Q  569 taatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcaca 17117650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 29480699 - 29480642
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||| |||||| ||||||||||||||||  || ||||||||||||||||||    
T  29480699 aatttgaataaacacttattcagtcaatttgaaaaattatttcattgaaagaatcaca 29480642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 345 - 609
Target Start/End: Original strand, 6360554 - 6360818
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaa 442  Q
    ||||||||||||||||||||||||| ||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||| |||||||  | |||||    
T  6360554 cccggccttgagggtgtgcaaggtgctcaatcaggccaggcctccaaatgctacgggcctctaacgaaaa-ttaaatctaatatccaccccccacttaaa 6360652  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||  |||||| | ||||||||||||||||||    
T  6360653 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactctagttctcttttttgcacataaatcggatcctatca 6360751  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcaca 609  Q
    || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6360752 aaccacccttaatttgtataatcacttaatcagtcaatttgaaaagttattcattgaaagaatcaca 6360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 352 - 609
Target Start/End: Original strand, 2618155 - 2618414
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa 449  Q
    ||||| |||||||||||| ||||| ||| |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||  | ||||||||||||    
T  2618155 ttgagagtgtgcaaggtgctcaaccaggtcgggtctccaaatgttacgggcctctattgaaaaattaaatctaatacccaccccccacttaaataaaaaa 2618254  T
Q  450 tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacc 549  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  |||||||| |||||||||||||||||||| ||||    
T  2618255 tatatatgttatatcattttctttctttagtacacgtttgagttttt-tctagactttagttctcttttttgtacataaatcggatcctatcaaaccacc 2618353  T
Q  550 cctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2618354 cctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 2618414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 3515127 - 3514855
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||  | |    
T  3515127 caggcccggccttgagggtgtgcaaggtgctcaaccaagccgggcctacaaatgctacgggcctctaacgaaaaattaaatttaatactcaccccccact 3515028  T
Q  439 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||| ||||||||| ||||||| |||||    
T  3515027 taaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctaaactctagttctcctttttgtacataaatcagatcc 3514928  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctat-tcattgaaagaatcaca 609  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||    
T  3514927 tatcaaaccacccctaatttgtataatcacgtaatcattcaatttggaaagctatatcattgaaagaatcaca 3514855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 347 - 609
Target Start/End: Original strand, 6754001 - 6754265
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaata 444  Q
    ||||||||||| ||||||||||| ||||  ||| ||| |||||||||| |||||||||||| ||||||||||| |||||||| |||  |||| |||||||    
T  6754001 cggccttgaggatgtgcaaggtgttcaatcaggtcggacctccaaatgctacgggcctctatcgaaaaattaattctaatactcactccccacttaaata 6754100  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 544  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| |||||||||  |||||||| ||||||||||||||||||||    
T  6754101 aaaaatatatatgttatatcattttctttctttagtacgcgtttgagttttt-tctagattctagttctcttttttgtacataaatcggatcctatcaaa 6754199  T
Q  545 tcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     || |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  6754200 ccatccctaatttgtatagtcacttaatcagtcaatttggaaagctatttcattgaaagaatcaca 6754265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 29400929 - 29401199
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 439  Q
    ||||||||| ||||||||||||||||||| ||||  ||  ||||  |||||||| |||||||||||||| ||||||||||| ||||||||||| ||| ||    
T  29400929 caggcccgggcttgagggtgtgcaaggtgctcaatcagatcgggtttccaaatgctacgggcctctaacaaaaaattaaatataatacccacctccactt 29401028  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||| |||||||||| |  |||||||| |||||||| ||||||    
T  29401029 aaataaaaaatatatatgtcatatcattttctttctttagtacacgtttgagtttttttcttgactctagttttcatttttgtacataaatcgaatccta 29401128  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||  |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  29401129 tcaaactacccctaattagtataatcacttaatcagtcaatttgaaaagttatttcattgaaagaatcaca 29401199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 350 - 609
Target Start/End: Complemental strand, 7525434 - 7525171
Alignment:
Q  350 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa 447  Q
    ||||||||||||  ||| || ||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||  | ||||||||||    
T  7525434 ccttgagggtgtataagatgctcaaccagacggggcctccaaatgctacgggtctctaacgaaaaattaaatctaatactcaccccccacttaaataaaa 7525335  T
Q  448 aatatatatgttatatcattttcttt-ctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatc 546  Q
    ||| ||||| ||||||| |||| ||| |||||||||||||||||||||   |||||||||||||||| | ||||||| |||||||||||||||||||| |    
T  7525334 aatttatatattatatcctttttttttctttagtacacgtttgagtttttttctagactctagttctccattttgtacataaatcggatcctatcaaacc 7525235  T
Q  547 acccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||    
T  7525234 acccataatttgtataatcacttaatcagtcaatttggaaagttattttattgaaagaatcaca 7525171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 363 - 609
Target Start/End: Original strand, 57498 - 57747
Alignment:
Q  363 caaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatttaaataaaaaatatatatgtta 460  Q
    ||||||| ||||| ||| ||| |||||||||| |||||||||| ||| ||||||||| ||||||||||||  |||| |||||||||| ||||||||||||    
T  57498 caaggtgctcaaccaggtcggacctccaaatgctacgggcctcaaacaaaaaattaagtctaatacccactccccacttaaataaaagatatatatgtta 57597  T
Q  461 tatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgta 560  Q
    ||||||||||||||||  ||||||||||||||||   | || ||||||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||||    
T  57598 tatcattttctttcttcggtacacgtttgagtttttttttaaactctagttctcctttttgtacataaatctgatcctatcaaaccacccataatttgta 57697  T
Q  561 taatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||||||||    
T  57698 taatcacttaatcagtcaatttagaaagctatttcattcaaagaatcaca 57747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 347 - 552
Target Start/End: Original strand, 24455014 - 24455220
Alignment:
Q  347 cggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaata 444  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||||| |||||||    
T  24455014 cggccttgagggtgtgcaaggtgctcaaccaggtcgggcctccaaatgctacggacctctaatgaaaaattaaatctaatacccaccccccacttaaata 24455113  T
Q  445 aaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaa 544  Q
    |||||||||||||||||||| |||   | ||||||||||||||||| |||   |||||||||||||||| |||||| |||||||||||||||||||||||    
T  24455114 aaaaatatatatgttatatc-tttatatcctttagtacacgtttgaatttttttctagactctagttctcctttttatatataaatcggatcctatcaaa 24455212  T
Q  545 tcacccct 552  Q
     |||||||    
T  24455213 ccacccct 24455220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 444 - 609
Target Start/End: Complemental strand, 12614885 - 12614721
Alignment:
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 543  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||   | |||||||||||||| ||||||||| |||||||||||||||||||    
T  12614885 aaaaaatatatatgttatatccttttcttt-tttagtacacgtttgagttttttt-tagactctagttctcctttttgtacataaatcggatcctatcaa 12614788  T
Q  544 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12614787 accacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 341 - 530
Target Start/End: Complemental strand, 31258734 - 31258543
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---at 437  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||   |     
T  31258734 caggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccacccccccac 31258635  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 530  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  31258634 ataaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 31258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 467 - 609
Target Start/End: Original strand, 29149316 - 29149462
Alignment:
Q  467 tttctttctttagtacacgtttgagtt---taaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataa 563  Q
    |||||||||||||||||||||||||||   |   |||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  29149316 tttctttctttagtacacgtttgagttgtttttttctagactctagttctcctttttgtacataaatcggatcctatcaaaccacacctaatttgtataa 29149415  T
Q  564 tcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||    
T  29149416 tcacttaatcagtcaatttggaaagttagttcattgaaagaatcaca 29149462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 457 - 609
Target Start/End: Complemental strand, 628254 - 628100
Alignment:
Q  457 gttatatcattttctttctttagtacacgtttgagttt-aaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaat 555  Q
    |||||||| | |||||||||||||||| |||||| |||    |||||||||||||||  ||||||||| | ||||| |||| ||||||| ||||||||||    
T  628254 gttatatcctcttctttctttagtacatgtttgattttcttttctagactctagttcacctttttgtacacaaatcagatcttatcaaaccacccctaat 628155  T
Q  556 ttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  628154 ttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 628100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 12622236 - 12622144
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc 433  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  12622236 caggcccagccttgagggtgtgcaaggtgctcaaccaggccgggcctccaaatgctacggacctctaacaaaaaattaaatctaatatccacc 12622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 500 - 609
Target Start/End: Complemental strand, 3748683 - 3748573
Alignment:
Q  500 tagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattg 598  Q
    |||| ||||||||| ||||||| | ||||||  ||| |||||||| | ||   |||||||||||||||||||||| |||||||||||||||| |||||||    
T  3748683 tagattctagttctactttttggacataaatttgatgctatcaaaccgccatcaatttgtataatcacttaatcaatcaatttgaaaagctatttcattg 3748584  T
Q  599 aaagaatcaca 609  Q
    |||||||||||    
T  3748583 aaagaatcaca 3748573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 444 - 609
Target Start/End: Complemental strand, 30915539 - 30915371
Alignment:
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatc 541  Q
    |||||| ||| |||||| ||  |||||||||||| |||| ||| |||||||   |  ||||||||||||||| |||| || | ||||||  ||| |||||    
T  30915539 aaaaaaaatacatgttacatatttttctttctttggtactcgtatgagtttttttttctagactctagttctactttctggacataaatttgatgctatc 30915440  T
Q  542 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| | ||   |||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  30915439 aaacccccatcaatttgtataattacttaatcagtcaatttgaaaagctatttaattgaaagaatcaca 30915371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 31860806 - 31861060
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||| |||||||||  ||||||||| ||||  | ||||| |||| ||| | || ||||||  ||  ||||||||| ||||||||||||||| |  |    
T  31860806 caggcccgaccttgagggaatgcaaggtgctcaatcaagccggacctcgaaaagctatgggcctaaaaaaaaaaattaactctaatacccacccccacct 31860905  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||           |||||||   |||||||||| ||   |||||||| |||||||||| | || | ||||||| | |  ||    
T  31860906 aaataaaaaatatatatgttac----------ttcttta---cacgtttgaggtttt-tctagactttagttcttctatctggacataaatctggta-ta 31860990  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  31860991 tcaaaccacccc-aatttgtataattacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 31861060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 21946109 - 21946161
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 604  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  21946109 aatttgtataatcacttaatcagtctatttgaaaagctatttcattgaaagaa 21946161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 609
Target Start/End: Complemental strand, 1690741 - 1690638
Alignment:
Q  507 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    ||||||| || |||| | ||||||| | | |||||||| |||| | ||||||||||||||||| |||| ||||||||||||  || ||||||||||||||    
T  1690741 tagttctcctatttggacataaatctggtactatcaaaccaccaccaatttgtataatcacttgatcaatcaatttgaaaatttatttcattgaaagaat 1690642  T
Q  606 caca 609  Q
    ||||    
T  1690641 caca 1690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 29308727 - 29308611
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-att 438  Q
    ||||||||||||||||||| |||||||||| ||||  | | |||||||||| | ||||  ||| ||  |  ||||||||| ||||||||||||||| | |    
T  29308727 tcaggcccggccttgagggagtgcaaggtgctcaatcaagtcgggcctccagaagttataggcttccga--aaaaattaactctaatacccacccccact 29308630  T
Q  439 taaataaaaaatatatatg 457  Q
    |||||||||||||||||||    
T  29308629 taaataaaaaatatatatg 29308611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 1093290 - 1093181
Alignment:
Q  350 ccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaa 448  Q
    ||||||||| |||||||||| |||| || | ||||||| ||||  ||| |||||||  |  ||||||||| ||||||||||||||| | |||||||||||    
T  1093290 ccttgagggagtgcaaggtgctcaattaagtcgggccttcaaaatttatgggcctccga--aaaaattaactctaatacccacccccacttaaataaaaa 1093193  T
Q  449 atatatatgtta 460  Q
     |||||||||||    
T  1093192 ctatatatgtta 1093181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 553 - 593
Target Start/End: Original strand, 31234913 - 31234953
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  31234913 aatttgtataatcacttaatcaatcaatttgaaaagctatt 31234953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 523 - 609
Target Start/End: Complemental strand, 14893509 - 14893422
Alignment:
Q  523 atataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||| ||||||||  || |  |||||||||||| |||||||||||||||||||||| ||| ||| || |||||||||||    
T  14893509 atataaatctgatgctatcaaacaactctgaatttgtataattacttaatcagtcaatttgaaaaactatttcgttaaaagaatcaca 14893422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 605
Target Start/End: Original strand, 22503725 - 22503798
Alignment:
Q  530 tcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    ||||||||||||||| ||| | |||||   |||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  22503725 tcggatcctatcaaaccactcataatt---ataatcacttaatcagtcaatttgaaaaactatttcgttgaaagaat 22503798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 460
Target Start/End: Complemental strand, 1690894 - 1690774
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatt 438  Q
    ||||||||| |||| |||| ||||||| || ||||  | |||| ||||||||| | || |||||||  |  ||||||||| ||||||||||||| ||| |    
T  1690894 tcaggcccgaccttaagggagtgcaagatgctcaatcaagccgagcctccaaaagctatgggcctcagaa-aaaaattaactctaatacccacctccact 1690796  T
Q  439 taaataaaaaatatatatgtta 460  Q
    ||||||||| ||||||||||||    
T  1690795 taaataaaatatatatatgtta 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 609
Target Start/End: Original strand, 19231529 - 19231671
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||| |||||| || ||||||||||||||   |||||| | ||||||| |||| || | ||||||| | | ||||||||  |||   |||||||||| ||    
T  19231529 ttttttttcttcaggacacgtttgagttttt-tctagagtttagttctactttctggacataaatctggtgctatcaaactaccttcaatttgtata-tc 19231626  T
Q  566 acttaatcagtcaatttgaaaagctat-tcattgaaagaatcaca 609  Q
    ||||||||| |||||||||||||||||  |||||||| |||||||    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcaca 19231671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 29308529 - 29308472
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| ||||||| |||||||||||||||||||||| ||| |||||||||  |||||||    
T  29308529 aattggtataatgacttaatcagtcaatttgaaaaactatttcattgaagtaatcaca 29308472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 593
Target Start/End: Original strand, 32056065 - 32056102
Alignment:
Q  556 ttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  32056065 ttgtataatcacttaatcactcaatttaaaaagctatt 32056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 1093102 - 1093046
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctattcattgaaagaatcaca 609  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||   |||||||||||||    
T  1093102 aattggtataatgactaaatcagtcaatttaaaaagctatttcatgaaagaatcaca 1093046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 593
Target Start/End: Original strand, 31244050 - 31244089
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  31244050 aatttgtataatcacttaatcaatcaa-ttgaaaagctatt 31244089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 3e-93; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 51110378 - 51110106
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccatt 438  Q
    |||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  ||| |    
T  51110378 caggcccgaccttgagggtgtgtaaggtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacctaccacccact 51110279  T
Q  439 taaataaaaaa-tatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||| | ||||||||| |||||||||||||    
T  51110278 taaataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactatagttatcctttttgtacataaatcggatcc 51110179  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  51110178 tatcaaaccacccctaatttctataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcaca 51110106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 345 - 609
Target Start/End: Complemental strand, 12884409 - 12884142
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--ttaaa 442  Q
    |||| ||||||||||||| |||||  ||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||| ||| ||| |  |||||    
T  12884409 cccgaccttgagggtgtgtaaggtactcaactaggtcgggcctccacatgctacggacctctaacgaaaaattaaatctaatatccaacccctacttaaa 12884310  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| | ||||||||| ||||||||||||||||||    
T  12884309 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttctagactctagttttcctttttgtacataaatcggatcctatca 12884210  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  12884209 aaccacccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcaca 12884142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 342 - 609
Target Start/End: Complemental strand, 14084975 - 14084706
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccattt 439  Q
    |||||| ||||||||||||||||||||| ||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||    
T  14084975 aggccctgccttgagggtgtgcaaggtgctcaaccagaccggacctccaaatgttacgggcctttaacgaaaaattaaatctaatacccaccctccactt 14084876  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||   |||||||||||||||| ||||||||| ||||||| |||||||    
T  14084875 aaataaaaaatatatatgttatatcattttctttcttcagtacaggtttgaattt-tttctagactctagttctcctttttgtacataaatctgatccta 14084777  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  14084776 tcaaatcacccctaaaatgtataatcacttaatcagtcaatttagaaagctatttcattgaaagaatcaca 14084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 346 - 609
Target Start/End: Complemental strand, 48722643 - 48722375
Alignment:
Q  346 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaat 443  Q
    ||||| |||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  | ||||||    
T  48722643 ccggctttgagggtgtgcaaagtgctcaaccaggccgggcctccaaatgctacgggcctctaacgaaaaattaaatttaatatccaccccccacttaaat 48722544  T
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactctagttcttctttttgtatataaatcggatcctatc 541  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||   |  |||||||||| ||||  |||||||| |||||||||||||||||    
T  48722543 aaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttctagactctatttctcatttttgtacataaatcggatcctatc 48722444  T
Q  542 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  48722443 aaaccacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcattgaaataatcaca 48722375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 344 - 609
Target Start/End: Original strand, 50552285 - 50552554
Alignment:
Q  344 gcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaa 441  Q
    |||||| ||| || |||||||||||| ||||| || || || ||||||||| || || ||||||||||||||||||||||||||||||||||  | ||||    
T  50552285 gcccggtcttaagagtgtgcaaggtgctcaaccagaccaggtctccaaatgctatggacctctaacgaaaaattaaatctaatacccaccccccacttaa 50552384  T
Q  442 ataaaa-aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 540  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||||||| ||||||||||||||||    
T  50552385 ataaaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttttttgtagactctagttctcctttttgtacataaatcggatcctat 50552484  T
Q  541 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  50552485 caaaccacccctaatttgtataatcacttaatcggtcaatttgaaaagttatttcattgaaagaatcaca 50552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 339 - 609
Target Start/End: Complemental strand, 17487563 - 17487288
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--cccca 436  Q
    ||||||||||| ||||||||||||||||||  ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  17487563 ttcaggcccggtcttgagggtgtgcaaggtcctcaaccaagccgggcctccaaatgatacgggcctctaacgaaaaattaaatctaatacccacccccca 17487464  T
Q  437 tttaaataaaaaatatatatgttatatcattttctttcttta--gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgga 534  Q
     ||||||||||||||||||||||||||  |||||||||||||  |||||| |||||||||   |||||||||||||||| |||||| || ||||||||||    
T  17487463 cttaaataaaaaatatatatgttatattcttttctttctttagtgtacacatttgagtttttttctagactctagttctcctttttttacataaatcgga 17487364  T
Q  535 tcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||| |||||||||||| |||||||||||||| | |||||||| |||| || ||||||||||||||||||    
T  17487363 tcctatcaaaccacccctaatttatataatcacttaataaatcaatttggaaagttatttcattgaaagaatcaca 17487288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 18128215 - 18127942
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 438  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||  ||||| |    
T  18128215 caggcccggccttgagggtgtgcaaggtgctcaaccaggccgggcctctaaatgctacggacctctaacgaaaaattaaatttaatacccagcccccact 18128116  T
Q  439 taaataa--aaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcggat 535  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||   |||||| |||||||| || |||||||  ||||||||||    
T  18128115 taaataaataaaaaatatatgttatatcattttctttctttagtacacgtttgagttttttttctagattctagttc-tccttttgtacgtaaatcggat 18128017  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  18128016 cctatcaaaccacccataatttgtataatcacttaatcagtcaatttgaaaagctatttcattgcaagaatcaca 18127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 33124909 - 33124635
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 437  Q
    |||||||| ||||||||||||||||||||| ||||  |||| ||||||||||| | |||||||||||||||||||||||||| |||||||||  ||| |     
T  33124909 tcaggccctgccttgagggtgtgcaaggtgctcaatcaggctgggcctccaaacgctacgggcctctaacgaaaaattaaatttaatacccatccccaac 33124810  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactc--tagttcttctttttgtatataaatcggat 535  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | |||||||  ||||||| |||||| || |||||||||||    
T  33124809 ttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctatagttctcctttttctacataaatcggat 33124710  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33124709 cctattaaaccacctctaatttgtataatcacttaataagtcaatttgaaaagctatttcattgaaagaatcaca 33124635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 346 - 609
Target Start/End: Original strand, 10109511 - 10109779
Alignment:
Q  346 ccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaat 443  Q
    |||||||||||||||||||||||| ||||||| |||| ||||  ||||  |||||| ||| ||||||||||||||||||||| |||||||  | ||||||    
T  10109511 ccggccttgagggtgtgcaaggtgctcaactaagccgagcctttaaatactacgggtctcaaacgaaaaattaaatctaatatccaccccccacttaaat 10109610  T
Q  444 aaaaaatata-tatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcctatc 541  Q
    |||||| | | |||||||||||||||||||| |||| |||||||||||||||   | ||||||||||||||| ||||||||| |||||| ||||||||||    
T  10109611 aaaaaaaaaaatatgttatatcattttctttttttattacacgtttgagttttttttctagactctagttctcctttttgtacataaattggatcctatc 10109710  T
Q  542 aaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  10109711 aaaccaccactaatttgtataatcacttaatcagtcaatttggaaagcaatttcattgaaagaatcaca 10109779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 423 - 609
Target Start/End: Original strand, 30899526 - 30899715
Alignment:
Q  423 taatacccacccc-atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttcttttt 520  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||    
T  30899526 taatacccacccccacttaaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttttttttctagactctagttctccttttt 30899625  T
Q  521 gtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  30899626 gtacataaatcggatcctatcaaatcacccctaatttgtataatcacttaattagtcaatttggaaagctatttcattgaaagaatcaca 30899715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 6150494 - 6150780
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccat--t 438  Q
    |||||||| |||||||||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |  |    
T  6150494 caggcccgaccttgagggtgtgcaaggtgctcaatcaggccgggcttccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccctact 6150593  T
Q  439 taaataaaaa---------------atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgta 523  Q
    |||||| | |               |||||||||||||||  |||||||||||   || ||||||||||||   |||||||||||||||| |||||||||    
T  6150594 taaatatatatatatatatatatatatatatatgttatattcttttctttcttcgctatacgtttgagtttttttctagactctagttctcctttttgta 6150693  T
Q  524 tataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     ||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6150694 cataaatcagatcctatcaaaccacccctaatttatataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 6150780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 342 - 609
Target Start/End: Complemental strand, 20905564 - 20905292
Alignment:
Q  342 aggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--attt 439  Q
    ||||||| ||||| |||  ||||||||||||||  ||||||||||||||||||| | ||| ||| ||| ||||||||| |||||||| ||||||  | ||    
T  20905564 aggcccgaccttgggggaatgcaaggtgatcaatcaggccgggcctccaaatgtcatgggtctcaaacaaaaaattaagtctaatactcacccccgactt 20905465  T
Q  440 aaataaaaaata-tatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 537  Q
    |||||||||| | ||||||||||||  ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||| |||||||  ||||    
T  20905464 aaataaaaaaaaatatatgttatattcttttctttctttagtacacgtttgagttttatttctagactctagttctcctttttgtacataaatctaatcc 20905365  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| || |||||||||||||||||||||| |||||||||||| ||  ||| ||||||||||||||||||    
T  20905364 tatcaaaccagccctaatttgtataatcacttattcagtcaatttggaagtctatttcattgaaagaatcaca 20905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 341 - 530
Target Start/End: Original strand, 20470516 - 20470706
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatt 438  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||  |||||      
T  20470516 caggccccgccttgagggtgtgcaaggtgctcaaccaggccggacctacaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccaca 20470615  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaat 530  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||| || | ||||||||| ||||||    
T  20470616 taaataaaaaatatatatgttatatccttttctttctttagtacacgtttgagttt-tttctagactctaattatcctttttgtacataaat 20470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 52055338 - 52055611
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccatt 438  Q
    |||||||| ||||| ||| |||||||||| ||||| |||||| ||||||||||| || ||| ||| ||  ||||||||| ||||||||||||  |||| |    
T  52055338 caggcccgaccttgggggagtgcaaggtgctcaaccaggccgagcctccaaatgctatgggtctcaaataaaaaattaagtctaatacccactccccact 52055437  T
Q  439 taaataaa-aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct-agactctagttcttctttttgtatataaatcggatc 536  Q
    ||||| || ||| |||||||||||||||||||||||||| |||| ||||||||||||   | | ||||||||||||| ||||||||| |||||||  |||    
T  52055438 taaatgaataaaaatatatgttatatcattttctttcttcagtatacgtttgagttttttttttagactctagttctcctttttgtacataaatctaatc 52055537  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
     |||||||  | || |||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  52055538 atatcaaactatccataatttatataatcacttaatcaatcaatttggaaagctatttcattgaaagaatcaca 52055611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 372 - 609
Target Start/End: Complemental strand, 29208341 - 29208103
Alignment:
Q  372 caactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-atttaaataaaaaatatatatgttatatcattttc 470  Q
    |||| ||||||| |||||||||  || | ||||| ||| ||||||||| |||||||| |||||| | |||||||||||| |||||||||||||| |||||    
T  29208341 caaccaggccggacctccaaattatatgagcctcaaacaaaaaattaagtctaatactcacccccacttaaataaaaaa-atatatgttatatccttttc 29208243  T
Q  471 tttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcactta 570  Q
    ||||||  |||||||||||| |||   ||||||||||||||||  |||||||| |||||||  ||| ||||||| ||||||||||||||||||||| |||    
T  29208242 tttcttcggtacacgtttgaatttttttctagactctagttctcttttttgtacataaatctaatcatatcaaaccacccctaatttgtataatcattta 29208143  T
Q  571 atcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||| || ||  ||| ||||||||||||||||||    
T  29208142 atcagtcaatctggaagtctatttcattgaaagaatcaca 29208103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 411 - 609
Target Start/End: Complemental strand, 27703737 - 27703534
Alignment:
Q  411 aaaaattaaatctaatacccacccc--atttaaat---aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagact 505  Q
    ||||||||| |||||||||||||||  | ||||||   |||||||||||||||||  || |||||||||||||||||||||||||||||   ||||||||    
T  27703737 aaaaattaagtctaatacccaccccccacttaaattaaaaaaaatatatatgttacttctttttctttctttagtacacgtttgagttttt-tctagact 27703639  T
Q  506 ctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaa 604  Q
    ||||||||  |||||| | ||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  27703638 ctagttctcttttttgaacataaatttgatgctatcaaaccacccccaatttgtataatcacttaatcagtcaatttggaaagctatttcatcgaaagaa 27703539  T
Q  605 tcaca 609  Q
    |||||    
T  27703538 tcaca 27703534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 398 - 609
Target Start/End: Original strand, 25930448 - 25930663
Alignment:
Q  398 cgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 495  Q
    |||||||| ||| |||| |||| | ||||||||||||  || |||||||||||| | || ||| ||||| |||||||| ||  ||||||||||||||||     
T  25930448 cgggcctcaaacaaaaatttaagtttaatacccaccctccacttaaataaaaaaaaaatgtgtgatatccttttcttttttcggtacacgtttgagtttt 25930547  T
Q  496 aa-tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-tt 593  Q
       ||||||||||||||||  |||||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25930548 ttgtctagactctagttctcatttttgtacataaatctgatcctatcaaactacccctaatttgtataatcacttaatcagtcaacttgaaaagctattt 25930647  T
Q  594 cattgaaagaatcaca 609  Q
    ||||||||| ||||||    
T  25930648 cattgaaaggatcaca 25930663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 411 - 606
Target Start/End: Complemental strand, 30005108 - 30004915
Alignment:
Q  411 aaaaattaaatctaatacccacc--ccatttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat--ctagactc 506  Q
    ||||||||| |||||||||||||  |||||||||||||||| |||| ||||||||| |||||||| ||  ||||||||||||||||   |  ||||||||    
T  30005108 aaaaattaagtctaatacccacctcccatttaaataaaaaa-atatgtgttatatccttttcttttttcggtacacgtttgagtttttttttctagactc 30005010  T
Q  507 tagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaat 605  Q
    || |||| ||||||||| ||||||| ||||||||||||      | |||||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  30005009 tacttctcctttttgtacataaatccgatcctatcaaa------ccaatttgtataatcacttaatcaattaatttgaaaagctatttcattgaaagaat 30004916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 609
Target Start/End: Complemental strand, 6333787 - 6333521
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccatttaaa 442  Q
    |||| ||||||||| |||||||||| || |  ||| ||| ||||||||||||||  ||||| ||| ||||||||  |||||||  ||  |||||||||||    
T  6333787 cccgaccttgagggagtgcaaggtgctctaacagggcggacctccaaatgttacaagcctcaaacaaaaaattatgtctaatattcatcccccatttaaa 6333688  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||| ||||||||||  |  |||||||||||  ||||||||||||||||   | ||||||||||||||  ||  |||| ||||||| ||| ||||||    
T  6333687 taaaaaaaatatatgttacttatttttctttcttcggtacacgtttgagtttttctttagactctagttctcattcctgtacataaatctgatactatca 6333588  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || ||  |||||| |||| |||||||||||||||||| ||| |||| || || ||| |||||||||||    
T  6333587 aacca-tcctaatctgtaaaatcacttaatcagtcaaattggaaagttattttattaaaagaatcaca 6333521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 371 - 557
Target Start/End: Original strand, 28189211 - 28189403
Alignment:
Q  371 tcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaa-----tatatatgttatat 463  Q
    ||||| |||||  |||| |||||| |||||| ||| ||| |||||| || |||||||||||||||  | ||||||||||||     ||||||||||||||    
T  28189211 tcaaccaggccaagccttcaaatgctacgggtctcaaacaaaaaatcaagtctaatacccaccccccacttaaataaaaaagaatatatatatgttatat 28189310  T
Q  464 cattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 557  Q
    ||||||||||||| | |||||||||||||||   | |||||| ||||||| ||||||||| ||||||| ||||||||||||  ||| |||||||    
T  28189311 cattttctttcttcaatacacgtttgagttt-tttttagactttagttctcctttttgtacataaatctgatcctatcaaactacctctaattt 28189403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 609
Target Start/End: Original strand, 12971214 - 12971465
Alignment:
Q  345 cccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaa 442  Q
    |||| ||||||||| |||||||||| ||||  | |||||||||||||  |  | |||||||  |  ||||||||| |||||||||||||||  | |||||    
T  12971214 cccgaccttgagggagtgcaaggtgctcaatcaagccgggcctccaagagcaatgggcctcaga--aaaaattaactctaatacccaccccccacttaaa 12971311  T
Q  443 taaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| |||  |||||    
T  12971312 taaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctgatattatca 12971397  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  12971398 aaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatcgaaagaatcaca 12971465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 50371081 - 50371193
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcat 596  Q
    |||||||||||||||| |||| || |||||||   ||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||  |||||    
T  50371081 tctagactctagttctcctttctggatataaagttgatgctatcaaatcaccctcaatttgtataatcacttaatcagtcaatttgaaaaactgtttcat 50371180  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  50371181 tgaaagaatcaca 50371193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 511 - 609
Target Start/End: Complemental strand, 28885775 - 28885676
Alignment:
Q  511 tcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| |||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||| ||||||| ||||||||||    
T  28885775 tcttttttttgtgcataaatcggatcctatcaaaccacccataatttgtataatcacttaatcaatcaattttgaaagctatttcattgtaagaatcaca 28885676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 466 - 609
Target Start/End: Original strand, 5560399 - 5560542
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    ||||||||||| |||||||||||||| ||   | |||||| |||||||  ||| || | ||||||| | | ||| |||| |||||| |||||||||||||    
T  5560399 ttttctttcttcagtacacgtttgagatttttt-tagactatagttctcatttctggacataaatctggtgctaccaaaccacccccaatttgtataatc 5560497  T
Q  566 acttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||    
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcaca 5560542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 473
Target Start/End: Complemental strand, 2022076 - 2021942
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatt 438  Q
    ||||||||||  |||| ||| |||||||||  ||||| ||||||||| |||||||  ||| | |||| ||| ||||||||| ||||||||| ||||||||    
T  2022076 ttcaggcccgaacttgggggagtgcaaggtactcaaccaggccgggcttccaaatactacagacctcaaacaaaaaattaagtctaatacctaccccatt 2021977  T
Q  439 taaataaaaaatatatatgttatatcattttcttt 473  Q
    ||||| ||||| ||||  |||||||| ||||||||    
T  2021976 taaattaaaaaaatatgagttatatccttttcttt 2021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 44836838 - 44836726
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||||| ||||||||| |||| || | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||| ||| ||||     
T  44836838 tctagattctagttctactttctgaacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaaactatttcac 44836739  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  44836738 tgaaagaatcaca 44836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 609
Target Start/End: Complemental strand, 37873898 - 37873767
Alignment:
Q  479 gtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtca 578  Q
    |||||||| |||||||   |||||||||||||||| |||| |  | ||||||  ||| |||||||| ||||   |||||||||| ||||||||||||| |    
T  37873898 gtacacgtatgagtttttttctagactctagttctactttctagacataaatttgatgctatcaaaccaccatcaatttgtatagtcacttaatcagtta 37873799  T
Q  579 atttgaaaagct-attcattgaaagaatcaca 609  Q
    ||||||||| ||  ||||||||||||||||||    
T  37873798 atttgaaaaactgtttcattgaaagaatcaca 37873767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 13120929 - 13120872
Alignment:
Q  552 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcac 608  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  13120929 taatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcac 13120872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 17674416 - 17674359
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  17674416 aatttgaataatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaca 17674359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 546 - 609
Target Start/End: Original strand, 2 - 66
Alignment:
Q  546 cacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  2 cacccttaatttgtataatcacttaatcagtcaatttggaaagtgatttcattgaaagaatcaca 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 1269347 - 1269610
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    ||||||||||||||| ||||| |||||  |  |||| | ||||||| || ||| |||| ||||||| ||  || |||||| ||||||| |||| ||  |     
T  1269347 tcaggcccggccttg-gggtgcgcaagcagcacaaccaagccgggcttctaaaagttatgggcctcaaaaaaacaattaagtctaatatccacacctcac 1269445  T
Q  438 ttaaataaaaa-atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||| ||||||||||| | || |||||||| ||  ||||||||||||||||   ||||||||||| |||| |||| |  | ||||||| |||     
T  1269446 ttaaataaaaatatatatatgttttttctttttcttttttctgtacacgtttgagttt-tttctagactctaattctcctttctagacataaatctgatg 1269544  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| ||| |||||| ||||||||         ||| |||||||||||||||||| |||||| |||||||||||    
T  1269545 ctatgaaaccacccccaatttgta--------aaattagtcaatttgaaaagctatttcattaaaagaatcaca 1269610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 609
Target Start/End: Complemental strand, 22386899 - 22386842
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22386899 aatttgaacaatcacttaatcagtcaatttgaaaaactatttcattgaaagaatcaca 22386842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 606
Target Start/End: Original strand, 42740057 - 42740166
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||||||||||||||| |||| || | |||| |  ||| ||||||||  |||   |||||||||||| ||||||| |||||||||||||| ||| |||||    
T  42740057 tctagactctagttctactttctggacataagtttgatgctatcaaacaaccatcaatttgtataataacttaattagtcaatttgaaaaactatttcat 42740156  T
Q  597 tgaaagaatc 606  Q
    ||||||||||    
T  42740157 tgaaagaatc 42740166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 607
Target Start/End: Original strand, 3907366 - 3907528
Alignment:
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 543  Q
    |||||| | ||||||||  || |||||||| |||||||||||||| |||||   | |||||| || || |||||| || | ||||||  |||  ||||||    
T  3907366 aaaaaaaaaatatgttacttctttttctttttttagtacacgtttaagttttttt-tagactttattttttctttatgaacataaatacgatggtatcaa 3907464  T
Q  544 atcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatca 607  Q
    | ||| || |||||||||||||| ||||||| ||||||||||||  || ||||||||||||||||    
T  3907465 accactcc-aatttgtataatcatttaatcaatcaatttgaaaaattatttcattgaaagaatca 3907528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 593
Target Start/End: Original strand, 15441193 - 15441332
Alignment:
Q  453 atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccct 552  Q
    ||||||||  || |||||||||||   |||||||||||||||   |||||||||||||||| |||| |  | ||||||   || |||||||| ||||       
T  15441193 atatgttacttctttttctttcttcgatacacgtttgagttttt-tctagactctagttctcctttctagacataaatataatgctatcaaaccacctac 15441291  T
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  15441292 aatttgtataatcacttaatcactcaatttataaagctatt 15441332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 585
Target Start/End: Original strand, 9777380 - 9777447
Alignment:
Q  518 tttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaa 585  Q
    |||| ||||||||| ||| ||| |||| |||||| ||||| |||||||||| ||||||||||||||||    
T  9777380 tttggatataaatctgatgctaccaaaccacccccaatttatataatcactcaatcagtcaatttgaa 9777447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 551 - 593
Target Start/End: Complemental strand, 32810415 - 32810373
Alignment:
Q  551 ctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  32810415 ctaatttgaataatcacttaatcaatcaatttgaaaagctatt 32810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 24556808 - 24556865
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||| ||||||||||||| |||||||||||||| ||| |||||| |||||||||||    
T  24556808 aatttgaataatcacttaataagtcaatttgaaaaactatttcatttaaagaatcaca 24556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 28886253 - 28886140
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 439  Q
    ||||||||||||| ||||  |||||||||  |||| |   ||| ||| ||||||||||| |||| ||||||| |||||||||||||| |||||  || |     
T  28886253 caggcccggccttaaggggttgcaaggtgtccaaccaaatcggaccttcaaatgttacgtgcctttaacgaagaattaaatctaatatccaccttcactc 28886154  T
Q  440 aaataaaaaatata 453  Q
    ||||||||||||||    
T  28886153 aaataaaaaatata 28886140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 573
Target Start/End: Complemental strand, 26486513 - 26486407
Alignment:
Q  466 ttttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatc 565  Q
    |||| |||||||||||||||| |||||||   |||| ||||||||||| |||| || | ||||||  ||| |||||||| || |   |||||||||||||    
T  26486513 ttttttttctttagtacacgtatgagttttt-tctaaactctagttctactttctggaaataaatttgatgctatcaaaccatcatcaatttgtataatc 26486415  T
Q  566 acttaatc 573  Q
    ||||||||    
T  26486414 acttaatc 26486407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 160; Significance: 6e-85; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 16493 - 16769
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--att 438  Q
    |||||| |||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | |    
T  16493 caggcctggccttgagggtgtgcaaggtgctcaaccagaccgggcctccaaatgctacgggcctctaacgaaaaattaaatctaatacccaccccccact 16592  T
Q  439 taaataaaaaatatatatgt-tatatcat---tttctttc-tttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgg 533  Q
    ||||||||| |||||||| | ||||| ||   ||| | || ||||||||||||||||||||   |||||||||||||||| ||||||||| |||||||||    
T  16593 taaataaaagatatatatatatatattatatctttatatcctttagtacacgtttgagtttttttctagactctagttctcctttttgtacataaatcgg 16692  T
Q  534 atcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16693 atcctatcaaaccacccctaatttgtataatcacttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 16769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 352 - 609
Target Start/End: Original strand, 13474427 - 13474689
Alignment:
Q  352 ttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccatttaaataaaa---- 447  Q
    |||||||||||||||||| | ||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||        
T  13474427 ttgagggtgtgcaaggtgcttaaccaggctgggtctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccacttaaataaaaaaaa 13474526  T
Q  448 aatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatca 547  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||||||||||  |||||||| |||||||||||||||||||| ||    
T  13474527 aatatatatattatatcattttttttctttagtacacgtttgagtttttttctaaactctagttctcttttttgtacataaatcggatcctatcaaacca 13474626  T
Q  548 cccctaatttgtataatcacttaatcagtcaatttgaaaagct-attcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  13474627 cccctaatttgtataatcacttaatcagtcaatttgaaaagttgtttcattgaaagaatcaca 13474689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 13423648 - 13423923
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 437  Q
    |||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |   ||||     
T  13423648 tcaggccccgccttgagggtgtgcaaggtgctcaaccaggcggggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacctatctcccac 13423747  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag---tttaaatctagactctagttcttctttttgtatataaatcgga 534  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||   |||   | ||||||||||||||  |||||||| ||||||||||    
T  13423748 ttaaataaaaaatatatatgttatatccttttctttctttagcacacgtatgagttttttttttttagactctagttctcttttttgtacataaatcgga 13423847  T
Q  535 tcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||| ||  ||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||    
T  13423848 tcctatcaaaccattcctaatttgtataatcacttaatcaatcaatttagaaagctatttcattgaaagaatcaca 13423923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 26378052 - 26377779
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc---at 437  Q
    |||| |||| ||||||||||||||||||| ||||| ||| ||||||| |||||  |||||| |||||||||||||||||||||||||  ||||||   |     
T  26378052 caggaccggtcttgagggtgtgcaaggtgctcaaccaggtcgggccttcaaattctacgggtctctaacgaaaaattaaatctaataatcacccccccac 26377953  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatc 536  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||   | ||||||||||||||| ||||||||| ||||||| ||||    
T  26377952 ttaaataaaaaatatatatgttatatttttttctttctttagtacacgtttgagttttttttctagactctagttctcctttttgtacataaatcagatc 26377853  T
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||    
T  26377852 ctatcaaaccacccctaatttgtataatcacttattcagtcaatgtgagaagctatttcattgaaagaatcaca 26377779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 377 - 609
Target Start/End: Original strand, 13656033 - 13656269
Alignment:
Q  377 aggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatttaaataaaaaatatatatgttatatcattttctttct 475  Q
    |||| ||||||||||||  | |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13656033 aggctgggcctccaaatacttcgggcctctaacgaaaaattaaatctaataaccacctccacttaaataaaaaatatatatgttatatcattttctttct 13656132  T
Q  476 ttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcct---atcaaatcacccctaatttgtataatcacttaat 572  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||||   |  ||| || ||||||||||||||||||||||||    
T  13656133 ttagtacacgtttgagttt-tttctagactctagttctcctttttgtacataaatcggatcctaaaaaaaaaccatccctaatttgtataatcacttaat 13656231  T
Q  573 cagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||||||| || ||||||||||||||||||    
T  13656232 cagtcaatttgaaaagttatttcattgaaagaatcaca 13656269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 343 - 609
Target Start/End: Complemental strand, 36718841 - 36718572
Alignment:
Q  343 ggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac--cccattta 440  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||| | |  |||| |||    
T  36718841 ggcccggctttgaggatgtgcaaggtgctcaactaggccgggcctccgaatgctacgggtctctaacgaaaaat-aaatctaatactctctccccactta 36718743  T
Q  441 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| |||||||   | ||||||||||||||| ||||||||| || ||||||||||||    
T  36718742 aataaaaaatatatatgttatattcttttctttttttagtacacgtgtgagttttttttctagactctagttctcctttttgtacatgaatcggatccta 36718643  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||| || || |||||||||||||||    
T  36718642 tcaaaccacccctaatttgtataatcatttaatcagtcaatttgtaaagttattttattgaaagaatcaca 36718572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 351 - 609
Target Start/End: Original strand, 12661102 - 12661368
Alignment:
Q  351 cttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccc--catttaaataaaaa 448  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||| ||||| |||| | | ||||||||||||||||| | ||||  || |||||||||||    
T  12661102 cttgagggtgtgcaaggtgctcaaccagatcgggcctccaaatgctacggacctcaatcaaaaaattaaatctaatatctaccctccacttaaataaaaa 12661201  T
Q  449 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctag------ttcttctttttgtatataaatcggatcctatca 542  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||      || || |||||||||||||||||||| ||||||    
T  12661202 atatatatgttatttcattttctttctttagtacacgtttgagttt-tttctagactctagtttttttttttttttttgtatataaatcggattctatca 12661300  T
Q  543 aatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    || |||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  12661301 aaccacctctaatttgtataatcacttaaccagtcaatttggaaagctatttcattgaaagaatcaca 12661368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 339 - 559
Target Start/End: Original strand, 8398766 - 8398989
Alignment:
Q  339 ttcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--a 436  Q
    |||||||||||  |||||||||||||||||| ||||  ||||||| |||||||||| |||||||| |||||||||||||||||||||||| ||||||  |    
T  8398766 ttcaggcccggt-ttgagggtgtgcaaggtgctcaatcaggccggacctccaaatgctacgggcccctaacgaaaaattaaatctaatactcacccccca 8398864  T
Q  437 tttaaataaaaaatat--atatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcgga 534  Q
     |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||   | ||||||||||||||  |||||||| ||||||||||    
T  8398865 cttaaataaaaaatatatatatgttatatccttttctttctttagtacacgtttgagtttttttttagactctagttctcatttttgtacataaatcgga 8398964  T
Q  535 tcctatcaaatcacccctaatttgt 559  Q
    |||||||||| ||||||||||||||    
T  8398965 tcctatcaaaccacccctaatttgt 8398989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 340 - 609
Target Start/End: Complemental strand, 19099592 - 19099319
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--at 437  Q
    |||| |||| ||||| ||| |||||||||| ||||| ||| |||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||  ||    
T  19099592 tcagacccgcccttgtgggagtgcaaggtgctcaaccaggtcgggcctccaaatactacgggcctcaaacaaaaaattaagtctaatacccaccccccat 19099493  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatct--agactctagttcttctttttgtatataaatcggat 535  Q
    |||||||||||| | || ||||||||| ||||| || ||  | ||| ||||||||||   | |  ||||| ||||||| ||||||||| ||||||| |||    
T  19099492 ttaaataaaaaaaa-atgtgttatatccttttcctttttcggcacatgtttgagtttttttttttagactatagttctcctttttgtacataaatctgat 19099394  T
Q  536 cctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  19099393 cctatcaaaccatccctaatttgtataatcacttaatcagtcaatttaaaaagctatttcattgaaagaatcaca 19099319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 398 - 574
Target Start/End: Original strand, 26311851 - 26312029
Alignment:
Q  398 cgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagttta 495  Q
    |||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||| || | |  ||||||||| |||||||||||     
T  26311851 cgggcctctaacgaaaaattaaatctaatacctacccccaacttaaataaaaaatatatatgttatatctttatatc-ctttagtactcgtttgagtttt 26311949  T
Q  496 aat-ctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatca 574  Q
      | ||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  26311950 ttttctagattctagttcttctttttgtacataaatcggatcctatcaaaccacccataatttgtataatcacttaatca 26312029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 341 - 609
Target Start/End: Original strand, 43511423 - 43511677
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccattt 439  Q
    |||||||||||||||||| |||||||||| ||||  | ||||| |||||||| | || |||||||  |  ||||||||||||||||||||||| ||| ||    
T  43511423 caggcccggccttgagggagtgcaaggtgctcaatcaagccggacctccaaaagctatgggcctcaga--aaaaattaaatctaatacccacctccactt 43511520  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    |||||||||||||||||||||           |||||||   |||||||||||||   |||||||| ||||||| || | || | ||||||| | | |||    
T  43511521 aaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttt-tctagactttagttctcctatctggacataaatctggtacta 43511606  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  43511607 tcaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagctatttcatggaaagaatcaca 43511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 4734840 - 4734587
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccaccccattta 440  Q
    |||||||||||||||||| ||||||  || ||||  | |||||||||||||| | || |||||||  |  ||||||||| |||||||||||||||| |||    
T  4734840 caggcccggccttgagggagtgcaaaatgctcaatcaagccgggcctccaaaagctatgggcctcata--aaaaattaactctaatacccaccccactta 4734743  T
Q  441 aataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctat 540  Q
    ||||||||||||||||||||       |||||       |||| ||||||||||   |||||||| ||||||| || | || | ||||||| | | ||||    
T  4734742 aataaaaaatatatatgtta------cttctt-------tacatgtttgagttt-tttctagactttagttctcctatctggacataaatctggtactat 4734657  T
Q  541 caaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||| |||| | ||||||||||||| ||| |||| |||||||||||| ||| ||||||||||||||||||    
T  4734656 caaaccaccaccaatttgtataatcccttgatcactcaatttgaaaatctatttcattgaaagaatcaca 4734587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 138091 - 138203
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||||||||||||||| ||||| | | ||||||  ||| |||||||| ||||   ||||||||||||||||||||||||||||||||||||||| |||||    
T  138091 tctagactctagttctacttttcggacataaatttgatgctatcaaaccaccatcaatttgtataatcacttaatcagtcaatttgaaaagctatttcat 138190  T
Q  597 tgaaagaatcaca 609  Q
    ||||| |||||||    
T  138191 tgaaataatcaca 138203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 341 - 609
Target Start/End: Complemental strand, 10591529 - 10591278
Alignment:
Q  341 caggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc-attt 439  Q
    |||||||||||||||||| |||||||||| ||||  | |||||||||||||| | || |||| | ||  ||||||| || ||||||||||||||| ||||    
T  10591529 caggcccggccttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggctt-ta--gaaaaatcaactctaatacccacccccattt 10591433  T
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatccta 539  Q
    ||||||||||||||| |            ||||| ||||   |||||||||||||   |||||||| ||||||| || | || | ||||||  | | |||    
T  10591432 aaataaaaaatatatgt------------tcttttttta---cacgtttgagttttt-tctagactttagttctcctatctgaacataaatatggtacta 10591349  T
Q  540 tcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  10591348 tcaaaccacccccaatttgtataatcacttaatcagttaatttgaaaagttatttcattgaaagaatcaca 10591278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 605
Target Start/End: Original strand, 27351179 - 27351404
Alignment:
Q  384 gcctccaaatgttacgggcctctaacgaaaaattaaa-tctaatacccaccccat--ttaaataaaa-aatatatatgttatatcattttctttctttag 479  Q
    |||||||||||||| ||||||| ||  | ||||| || |||||||| |||||| |  || ||||||| || ||||||||||  || ||||||||||| ||    
T  27351179 gcctccaaatgttatgggcctcaaaaaataaatttaagtctaatactcaccccctacttgaataaaataaaatatatgttacttccttttctttcttcag 27351278  T
Q  480 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 579  Q
    || ||||||||| ||   |||||||||||||||| |||| || | ||||||  | | |||||||| |||| | ||||||||||| |||||||||||||||    
T  27351279 tatacgtttgagatttt-tctagactctagttctcctttctgaacataaatttggtgctatcaaaccacctccaatttgtataaccacttaatcagtcaa 27351377  T
Q  580 tttgaaaagcta-ttcattgaaagaat 605  Q
    |||| |||| || ||||||||||||||    
T  27351378 tttggaaagttatttcattgaaagaat 27351404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 609
Target Start/End: Original strand, 29156120 - 29156249
Alignment:
Q  480 tacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaa 579  Q
    |||||||||||||||   |||||||| ||||| | || | || | ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  29156120 tacacgtttgagttttt-tctagactatagttatcctatctgaacataaatctggtactatcaaaccacccctaatttgtataatcacttaatcagtcaa 29156218  T
Q  580 tttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||| ||||| || ||||||||||||||||||    
T  29156219 tttaaaaagttatttcattgaaagaatcaca 29156249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 609
Target Start/End: Original strand, 20975788 - 20976044
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc-ccatt 438  Q
    ||||||||| | ||||||| |||||||||| ||||  | |||||||||||||| | || |||||||    |||||||||| ||||||||||||| ||| |    
T  20975788 tcaggcccgactttgagggagtgcaaggtgctcaatcaagccgggcctccaaaagctatgggcctca---gaaaaattaactctaatacccacctccact 20975884  T
Q  439 taaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaat-ctagactctagttcttctttttgtatataaatcggatcc 537  Q
    ||||||||||||||||||||||           |||||||   |||||||||||||   | ||||||| |||||||  | | |  | ||||||  | | |    
T  20975885 taaataaaaaatatatatgttac----------ttcttta---cacgtttgagttttttttctagactttagttctcttatcttgacataaatttggtac 20975971  T
Q  538 tatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||| |||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  20975972 tatcaaaccaccaccaatttgtataatcatttaatcagtcaatttgaaaagctatttcattgaaagaatcaca 20976044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 42291959 - 42291886
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  42291959 ctatcaaatcaccaccaatttgtataatcacttaatcagtcaatttgaaaatctatttcattgaaagaatcaca 42291886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 609
Target Start/End: Complemental strand, 17514053 - 17513941
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcat 596  Q
    |||||||| ||||||| || | || ||||||||| | | ||| |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||     
T  17514053 tctagactttagttctcctatctggatataaatctggtactaacaaaccacccccaatttgtataatcacttaatcagtcaatttgaaaagttatttcac 17513954  T
Q  597 tgaaagaatcaca 609  Q
    |||||||||||||    
T  17513953 tgaaagaatcaca 17513941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 593
Target Start/End: Original strand, 931327 - 931422
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    |||||||| |||||||  ||| | |||||||||  ||| |||| ||||||| || ||||||||||||||||||||||||||||||  |||||||||    
T  931327 tctagactatagttctcttttctatatataaatttgatgctattaaatcacacccaatttgtataatcacttaatcagtcaatttagaaagctatt 931422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 552 - 609
Target Start/End: Original strand, 18873458 - 18873516
Alignment:
Q  552 taatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18873458 taatttgtataaccacttaatcagccaatttgaaaagctatttcattgaaagaatcaca 18873516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 444 - 574
Target Start/End: Complemental strand, 8379691 - 8379562
Alignment:
Q  444 aaaaaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaa 543  Q
    |||||| | ||||||||| || |||||||||||  |||||| |||||||||   ||||||||||  ||||  ||| || | ||||||  |||  ||||||    
T  8379691 aaaaaaaaaatatgttatttctttttctttcttcggtacacatttgagttttt-tctagactctcattctcatttatggacataaatatgatgttatcaa 8379593  T
Q  544 atcacccctaatttgtataatcacttaatca 574  Q
    ||||||||||||||||||||| |||||||||    
T  8379592 atcacccctaatttgtataattacttaatca 8379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 609
Target Start/End: Original strand, 10033493 - 10033606
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaat-cagtcaatttgaaaagcta-ttca 595  Q
    |||||||||||||||| |||| |||| ||||||  ||| |||||||| | ||   |||||||||||||||| | |  |||||||||||||||||| || |    
T  10033493 tctagactctagttctactttctgtacataaatttgatgctatcaaacccccatcaatttgtataatcactgattaaagtcaatttgaaaagctatttta 10033592  T
Q  596 ttgaaagaatcaca 609  Q
    ||||||||||||||    
T  10033593 ttgaaagaatcaca 10033606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 609
Target Start/End: Original strand, 40956217 - 40956372
Alignment:
Q  449 atatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcac 548  Q
    ||||||||||||  || |||||||||||     |||||||||||||   |||||||||||||||| |||| || | ||||||| ||| | ||||||        
T  40956217 atatatatgttacttctttttctttctt-----cacgtttgagttttt-tctagactctagttctcctttgtggacataaatctgatgcaatcaaacatt 40956310  T
Q  549 ccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | | |||||||||||||||||||||| | |||||||||| ||| |||||| |||||||||||    
T  40956311 ctccaatttgtataatcacttaatcatttaatttgaaaaactatttcattaaaagaatcaca 40956372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 460
Target Start/End: Complemental strand, 42292131 - 42292022
Alignment:
Q  349 gccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccac-cccatttaaataaaa 447  Q
    |||||||||| |||||||||| |||| ||| ||||||||||||| | ||  ||||||  |  ||||||||| |||||||| ||| |||| ||||||||||    
T  42292131 gccttgagggagtgcaaggtgctcaattag-ccgggcctccaaaagctataggcctcaga--aaaaattaactctaatactcacgcccacttaaataaaa 42292035  T
Q  448 aatatatatgtta 460  Q
    |||||||||||||    
T  42292034 aatatatatgtta 42292022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 3349784 - 3349734
Alignment:
Q  560 ataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  3349784 ataatgacttaatcagtcaatttgaaaagctatttcatagaaagaatcaca 3349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 609
Target Start/End: Original strand, 5829387 - 5829442
Alignment:
Q  553 aatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||    
T  5829387 aatttgtataatcacttaatcagtcaattt--aaagctatttcattaaaagaatcaca 5829442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 555 - 608
Target Start/End: Complemental strand, 7390460 - 7390406
Alignment:
Q  555 tttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcac 608  Q
    |||||||||||||||||||||||||||| ||||| || ||||| |||||||||||    
T  7390460 tttgtataatcacttaatcagtcaatttaaaaagttatttcatcgaaagaatcac 7390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 17514138 - 17514092
Alignment:
Q  411 aaaaattaaatctaataccca-ccccatttaaataaaaaatatatat 456  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  17514138 aaaaattaaatctaatacccacccccacttaaataaaaaatatatat 17514092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 554 - 609
Target Start/End: Original strand, 17325847 - 17325904
Alignment:
Q  554 atttgtataatcacttaatcagtcaatttg-aaaagcta-ttcattgaaagaatcaca 609  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  17325847 atttgaataatcacttaatcagtcaatttgaaaaaactatttcattgaaagaatcaca 17325904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 431 - 593
Target Start/End: Original strand, 23069099 - 23069262
Alignment:
Q  431 accccatttaaataaa--aaatatatatgttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataa 528  Q
    |||||| |||||||||  ||| ||||||||||  || |||||||||||   |||||||||| ||||   | || |||||| |||| |||| || | ||||    
T  23069099 accccacttaaataaataaaagatatatgttacttctttttctttcttcgttacacgtttgtgttttttt-tatactctaattctcctttctgaacataa 23069197  T
Q  529 atcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||  ||| ||| |||| |||||| ||||||||||||| |||||||| || ||||| |||||||||    
T  23069198 atatgatgctagcaaaccacccccaatttgtataatcccttaatcattcgatttggaaagctatt 23069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 554 - 606
Target Start/End: Original strand, 33281677 - 33281730
Alignment:
Q  554 atttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatc 606  Q
    ||||||||||||||||||| ||||||||| ||||| || |||||||||||||||    
T  33281677 atttgtataatcacttaattagtcaatttaaaaagttatttcattgaaagaatc 33281730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 37029108 - 37029054
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctatt 593  Q
    ||||||||||| ||  |||||||||||||||||||||| ||||||| ||||||||||    
T  37029108 ctatcaaatcatcc--aatttgtataatcacttaatcaatcaatttaaaaagctatt 37029054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 460
Target Start/End: Original strand, 29156062 - 29156113
Alignment:
Q  411 aaaaattaaatctaatacccacc-ccatttaaat-aaaaaatatatatgtta 460  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  29156062 aaaaattaaatctaatacccacctctatttaaataaaaaaatatatatgtta 29156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 488
Target Start/End: Original strand, 40778675 - 40778785
Alignment:
Q  381 cgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacccc--atttaaataaaa-aatatatatgttatatcattttctttcttt 477  Q
    |||||||||||| |||| | ||||| ||| ||| ||||| |||||||| ||||||  | |||||||||| || ||||||||||  || |||||||||||     
T  40778675 cgggcctccaaaagttatgagcctcaaacaaaatattaagtctaatactcaccccctacttaaataaaataaaatatatgttacttccttttctttcttg 40778774  T
Q  478 agtacacgttt 488  Q
    ||| |||||||    
T  40778775 agtgcacgttt 40778785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 3349917 - 3349869
Alignment:
Q  412 aaaattaaatctaatacccaccccatttaaataaaaaatatatatgtta 460  Q
    |||||||| | ||||||||||| || |||||||||||||| ||||||||    
T  3349917 aaaattaattgtaatacccacctcacttaaataaaaaatacatatgtta 3349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 40779139 - 40779235
Alignment:
Q  498 tctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagctattc 594  Q
    |||||| ||||||||| |||| || | ||||||  |||  |||||||  | ||| |||||||||||||  ||||| |||||||||||||| ||||||    
T  40779139 tctagagtctagttctcctttctgaacataaatttgatgttatcaaactatccccaatttgtataatcgtttaataagtcaatttgaaaaactattc 40779235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 340 - 532
Target Start/End: Complemental strand, 23041 - 22846
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaatacccacc--ccat 437  Q
    |||||||  ||||| |||||||| |||||| ||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||  |||     
T  23041 tcaggccttgccttcagggtgtgtaaggtgctcaaccaggccggacctccaaatgatacgggtctctaacgaaaaattaaatctaatatccaccctccac 22942  T
Q  438 ttaaataaaaaatatatatgttatatcattttctttctttagtacacgtttgag-tttaaatctagactctagttcttctttttgtatataaatcg 532  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||   | ||||||||| |||| ||||||||| ||||||||    
T  22941 ttaaataaaaaatatatatgttatatccttttatttctttagtacacgtttgagttttttttgtagactctaattctcctttttgtacataaatcg 22846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 96; Significance: 9e-47; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 440 - 609
Target Start/End: Complemental strand, 17307 - 17137
Alignment:
Q  440 aaataaaaaatatatatgttatatcattttctttctttagtacacgtttgagt-ttaaatctagactctagttcttctttttgtatataaatcggatcct 538  Q
    ||||||||||||||||||||||| | || | |  ||||||||||||||||| | ||   ||||||||||||||||  |||||||||||||||||||||||    
T  17307 aaataaaaaatatatatgttataactttatatc-ctttagtacacgtttgaatgttttttctagactctagttctcatttttgtatataaatcggatcct 17209  T
Q  539 atcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  17208 atcaaatcacccctaatttgtataatcacttaatcagtcaatttggaaagctatttcgttgaaagaatcaca 17137  T

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Target: scaffold0181; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 340 - 448
Target Start/End: Complemental strand, 18238 - 18128
Alignment:
Q  340 tcaggcccggccttgagggtgtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaattaaatctaataccca--ccccat 437  Q
    |||| ||| |||||||||||||| |||||| ||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||    
T  18238 tcagtcccagccttgagggtgtgaaaggtgttcaatcaggccgggcctccaaatgttatgggcctttaacgaaaaattaaatctaatactcaccccccat 18139  T
Q  438 ttaaataaaaa 448  Q
    |||||||||||    
T  18138 ttaaataaaaa 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 360 - 609
Target Start/End: Complemental strand, 46429 - 46178
Alignment:
Q  360 gtgcaaggtgatcaactaggccgggcctccaaatgttacgggcctctaacgaaaaa-ttaaatctaatacccaccc-catttaaataaaaaatatatatg 457  Q
    |||||||||| ||||| ||||||| ||| ||||||  | ||||||| ||| ||||| |||| |||||||||||| | || |||||||||||| | | |||    
T  46429 gtgcaaggtgctcaaccaggccggaccttcaaatgccatgggcctcaaacaaaaaaattaagtctaatacccacacacacttaaataaaaaaaaaa-atg 46331  T
Q  458 ttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaattt 557  Q
    |||||||||||| ||||||  |||||| ||||| |||   ||||||||||||||||  ||||| || ||| ||| |||||||||||| ||||| ||||||    
T  46330 ttatatcattttatttcttcggtacacatttgaatttttttctagactctagttctcatttttatacatatatctgatcctatcaaaccacccataattt 46231  T
Q  558 gtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    | |||||||||||||||||||||||| ||  ||| |||||||||| |||||||    
T  46230 ggataatcacttaatcagtcaatttggaagtctatttcattgaaataatcaca 46178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 979 - 1088
Alignment:
Q  457 gttatatcattttctttctttagtacacgtttgagtttaaatctagactctagttcttctttttgtatataaatcggatcctatcaaatcacccctaatt 556  Q
    |||||||| |||| |||||||| |||| ||||||||||   |||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||    
T  979 gttatatccttttatttctttattacatgtttgagtttttttctagactctagttctcctttttgtgcataaatcggatcctatcaaaccacccctaatt 1078  T
Q  557 tgtataatca 566  Q
    ||||||||||    
T  1079 tgtataatca 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 8473 - 8400
Alignment:
Q  537 ctatcaaatcacccctaatttgtataatcacttaatcagtcaatttgaaaagcta-ttcattgaaagaatcaca 609  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||  ||| ||| ||||||||||||||||||    
T  8473 ctatcaaaccacccataatttgtataatcaattaatcagtcaatttcgaaaactatttcattgaaagaatcaca 8400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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