View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0698_low_2 (Length: 412)
Name: NF0698_low_2
Description: NF0698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0698_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 12285392 - 12285598
Alignment:
| Q |
87 |
gagatcctatcgattcttctatttgctcttgactccaaatattttgtttagcctactatacctaaatatattttaccttaccttagcctcattataacct |
186 |
Q |
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| T |
12285392 |
gagatcctatcgattcttctatttgctcttgactccaaatattttgtttagcctactatacctaaatatattttaccttacgttagcctcattataacct |
12285491 |
T |
|
| Q |
187 |
ttaaagacttctaaaatgtgtatgatcgtacttggctttgaatgacaatttaaaatatctccaagtttataggaaaatgcattagtatgttgattgagtg |
286 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
12285492 |
ttaaagacttctaaaatgtgtatggtcgtacttggctttgaatgacaatttaaaatatctccaagtttataggaaaatgcattagtatgttgattgagtg |
12285591 |
T |
|
| Q |
287 |
agcgcct |
293 |
Q |
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||||||| |
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| T |
12285592 |
agcgcct |
12285598 |
T |
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