View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0699_low_4 (Length: 400)

Name: NF0699_low_4
Description: NF0699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0699_low_4
NF0699_low_4
[»] chr3 (43 HSPs)
chr3 (1-371)||(40330216-40330586)
chr3 (152-292)||(13495331-13495472)
chr3 (133-295)||(38389465-38389628)
chr3 (133-291)||(54527707-54527866)
chr3 (135-295)||(10307787-10307947)
chr3 (151-291)||(40497084-40497224)
chr3 (177-291)||(1569191-1569305)
chr3 (135-295)||(2571289-2571449)
chr3 (133-296)||(42180070-42180234)
chr3 (135-284)||(11610935-11611084)
chr3 (147-273)||(38786343-38786468)
chr3 (135-295)||(12515471-12515631)
chr3 (189-293)||(36426408-36426512)
chr3 (135-296)||(51618070-51618229)
chr3 (135-254)||(53794784-53794904)
chr3 (204-295)||(23523036-23523127)
chr3 (209-303)||(51401535-51401629)
chr3 (212-293)||(2566580-2566661)
chr3 (209-290)||(39364872-39364953)
chr3 (135-294)||(3863350-3863509)
chr3 (133-291)||(8165664-8165823)
chr3 (135-292)||(20938077-20938235)
chr3 (135-218)||(37444167-37444250)
chr3 (209-291)||(31318736-31318818)
chr3 (135-296)||(37055362-37055524)
chr3 (133-291)||(27549556-27549721)
chr3 (133-200)||(9710962-9711030)
chr3 (152-295)||(16875022-16875165)
chr3 (209-284)||(23638057-23638132)
chr3 (161-289)||(23803049-23803178)
chr3 (152-272)||(50364228-50364348)
chr3 (165-253)||(13879846-13879934)
chr3 (146-264)||(26486405-26486521)
chr3 (204-275)||(41541333-41541404)
chr3 (209-292)||(48346365-48346446)
chr3 (135-200)||(2379164-2379227)
chr3 (209-263)||(38785975-38786029)
chr3 (211-292)||(15862902-15862982)
chr3 (177-258)||(23320133-23320214)
chr3 (162-263)||(7940838-7940941)
chr3 (168-240)||(22103018-22103089)
chr3 (236-296)||(25633120-25633180)
chr3 (146-201)||(46922853-46922909)
[»] chr8 (53 HSPs)
chr8 (135-295)||(26682088-26682249)
chr8 (146-291)||(34741666-34741811)
chr8 (146-290)||(44091350-44091494)
chr8 (135-296)||(8284564-8284727)
chr8 (133-295)||(26834579-26834742)
chr8 (133-295)||(9580106-9580269)
chr8 (133-295)||(31812131-31812294)
chr8 (151-294)||(39024855-39024998)
chr8 (135-295)||(7140456-7140616)
chr8 (152-295)||(6818054-6818198)
chr8 (133-295)||(12132001-12132164)
chr8 (133-295)||(38843722-38843885)
chr8 (135-295)||(10129124-10129284)
chr8 (135-295)||(20514653-20514814)
chr8 (134-293)||(12189587-12189747)
chr8 (134-293)||(12434015-12434175)
chr8 (135-294)||(14816124-14816283)
chr8 (135-294)||(14829457-14829616)
chr8 (184-295)||(14961660-14961771)
chr8 (135-297)||(35678270-35678432)
chr8 (209-295)||(28014855-28014941)
chr8 (135-295)||(3306052-3306212)
chr8 (133-296)||(45005988-45006151)
chr8 (135-294)||(2161408-2161567)
chr8 (177-284)||(7393253-7393359)
chr8 (209-295)||(27874678-27874764)
chr8 (155-291)||(4080395-4080531)
chr8 (139-294)||(5573312-5573466)
chr8 (190-291)||(37389438-37389539)
chr8 (135-262)||(6850607-6850735)
chr8 (155-291)||(4084544-4084680)
chr8 (155-291)||(4102851-4102987)
chr8 (210-295)||(26363987-26364072)
chr8 (152-291)||(13327942-13328081)
chr8 (204-296)||(18567412-18567504)
chr8 (224-294)||(15198898-15198968)
chr8 (152-281)||(38047949-38048078)
chr8 (226-295)||(9801780-9801849)
chr8 (146-267)||(10974583-10974701)
chr8 (226-298)||(7977990-7978062)
chr8 (135-293)||(39701802-39701960)
chr8 (135-188)||(7750688-7750741)
chr8 (224-297)||(19343831-19343904)
chr8 (190-254)||(1513246-1513309)
chr8 (224-292)||(9825063-9825131)
chr8 (133-200)||(37264519-37264587)
chr8 (237-296)||(1203724-1203783)
chr8 (141-254)||(9743888-9744001)
chr8 (146-227)||(32195881-32195960)
chr8 (177-222)||(33448817-33448862)
chr8 (135-200)||(44222526-44222591)
chr8 (244-292)||(13496709-13496757)
chr8 (133-200)||(34869614-34869682)
[»] chr2 (38 HSPs)
chr2 (135-297)||(15411617-15411780)
chr2 (139-294)||(9747341-9747497)
chr2 (146-275)||(37471757-37471888)
chr2 (184-284)||(12919358-12919458)
chr2 (133-294)||(43806378-43806540)
chr2 (135-295)||(27665041-27665201)
chr2 (146-292)||(45062229-45062376)
chr2 (135-295)||(12016687-12016847)
chr2 (157-295)||(38248417-38248555)
chr2 (135-295)||(14377445-14377605)
chr2 (135-295)||(25997999-25998160)
chr2 (135-295)||(5583555-5583715)
chr2 (133-292)||(7720133-7720293)
chr2 (177-295)||(9450320-9450438)
chr2 (135-292)||(23932585-23932743)
chr2 (137-291)||(34213950-34214107)
chr2 (135-295)||(16126556-16126716)
chr2 (135-290)||(19228446-19228601)
chr2 (152-295)||(24729574-24729718)
chr2 (209-296)||(7757782-7757869)
chr2 (135-230)||(22162139-22162234)
chr2 (209-295)||(4576323-4576409)
chr2 (135-292)||(20566017-20566175)
chr2 (209-295)||(29157826-29157912)
chr2 (209-295)||(36731275-36731361)
chr2 (151-290)||(2060044-2060184)
chr2 (161-295)||(4821323-4821457)
chr2 (224-278)||(17234952-17235006)
chr2 (135-266)||(39904074-39904205)
chr2 (135-284)||(16919162-16919311)
chr2 (189-292)||(15231906-15232009)
chr2 (204-291)||(16123368-16123455)
chr2 (237-296)||(17265527-17265586)
chr2 (150-200)||(12438740-12438790)
chr2 (146-200)||(22593318-22593372)
chr2 (146-200)||(34817575-34817629)
chr2 (146-221)||(2051645-2051721)
chr2 (232-284)||(8770894-8770946)
[»] chr7 (42 HSPs)
chr7 (135-292)||(25709399-25709557)
chr7 (135-295)||(7170023-7170183)
chr7 (135-294)||(47457459-47457619)
chr7 (135-304)||(19889361-19889530)
chr7 (133-297)||(4969791-4969956)
chr7 (151-296)||(24462951-24463096)
chr7 (151-294)||(23982753-23982897)
chr7 (135-294)||(33343009-33343168)
chr7 (135-294)||(5909280-5909439)
chr7 (135-295)||(46290031-46290191)
chr7 (177-291)||(7899487-7899601)
chr7 (193-290)||(41331458-41331555)
chr7 (133-292)||(45501477-45501637)
chr7 (189-291)||(5833430-5833532)
chr7 (168-294)||(34270315-34270441)
chr7 (152-292)||(384431-384570)
chr7 (135-295)||(9331982-9332142)
chr7 (209-294)||(33072076-33072161)
chr7 (135-294)||(39757108-39757267)
chr7 (151-290)||(28323172-28323311)
chr7 (209-292)||(29398134-29398217)
chr7 (133-293)||(8091311-8091472)
chr7 (135-295)||(12085928-12086088)
chr7 (135-257)||(19868134-19868257)
chr7 (135-222)||(42750309-42750396)
chr7 (138-284)||(3530122-3530268)
chr7 (135-240)||(39869143-39869248)
chr7 (151-267)||(12650857-12650973)
chr7 (213-290)||(26037192-26037269)
chr7 (226-291)||(26050462-26050527)
chr7 (226-291)||(26059821-26059886)
chr7 (135-294)||(3561876-3562035)
chr7 (209-293)||(8420832-8420916)
chr7 (232-292)||(22334021-22334081)
chr7 (224-292)||(24250608-24250676)
chr7 (209-292)||(26300666-26300749)
chr7 (134-292)||(29692540-29692699)
chr7 (242-292)||(2341877-2341927)
chr7 (209-294)||(36032541-36032626)
chr7 (177-265)||(47707911-47707999)
chr7 (209-275)||(12624732-12624797)
chr7 (135-219)||(24699156-24699240)
[»] chr1 (53 HSPs)
chr1 (136-294)||(30362993-30363152)
chr1 (135-296)||(41624850-41625011)
chr1 (135-294)||(6754492-6754651)
chr1 (133-294)||(34801986-34802147)
chr1 (133-295)||(30171897-30172060)
chr1 (133-295)||(30187438-30187601)
chr1 (133-295)||(22167353-22167516)
chr1 (135-292)||(47355378-47355535)
chr1 (133-292)||(23591716-23591876)
chr1 (135-294)||(36490799-36490959)
chr1 (133-297)||(6180204-6180369)
chr1 (135-295)||(39150324-39150484)
chr1 (135-294)||(1502718-1502877)
chr1 (133-295)||(3168065-3168228)
chr1 (133-294)||(38812758-38812920)
chr1 (135-294)||(313770-313929)
chr1 (162-291)||(9516628-9516758)
chr1 (151-295)||(17919490-17919634)
chr1 (135-295)||(23576411-23576571)
chr1 (152-251)||(39627612-39627712)
chr1 (164-294)||(6569983-6570113)
chr1 (229-296)||(39310782-39310849)
chr1 (189-291)||(13241832-13241934)
chr1 (154-267)||(21854142-21854256)
chr1 (162-291)||(35438762-35438892)
chr1 (161-293)||(30288863-30288995)
chr1 (135-295)||(44918045-44918205)
chr1 (133-275)||(7824875-7825018)
chr1 (189-292)||(29635748-29635851)
chr1 (218-296)||(25465262-25465340)
chr1 (177-273)||(31100952-31101048)
chr1 (229-292)||(1366162-1366225)
chr1 (210-293)||(4607571-4607654)
chr1 (146-275)||(23378519-23378651)
chr1 (194-292)||(33673735-33673833)
chr1 (135-201)||(43317510-43317576)
chr1 (209-267)||(51467548-51467606)
chr1 (238-292)||(51920431-51920485)
chr1 (209-281)||(28016275-28016347)
chr1 (177-257)||(34050318-34050398)
chr1 (180-284)||(49798833-49798937)
chr1 (224-291)||(281072-281139)
chr1 (147-292)||(2222236-2222380)
chr1 (177-292)||(5057065-5057180)
chr1 (209-291)||(43909288-43909368)
chr1 (246-292)||(3611883-3611929)
chr1 (152-281)||(39930812-39930941)
chr1 (209-275)||(48085878-48085944)
chr1 (238-295)||(3096333-3096390)
chr1 (209-293)||(10896448-10896532)
chr1 (209-293)||(20357365-20357449)
chr1 (209-293)||(20562506-20562590)
chr1 (162-273)||(52833491-52833602)
[»] chr5 (37 HSPs)
chr5 (135-296)||(8103576-8103737)
chr5 (152-290)||(31567493-31567632)
chr5 (152-296)||(6863594-6863738)
chr5 (133-295)||(3398238-3398401)
chr5 (135-297)||(11636752-11636914)
chr5 (147-292)||(15240950-15241096)
chr5 (135-295)||(30839802-30839962)
chr5 (135-295)||(36597600-36597760)
chr5 (133-298)||(18841699-18841865)
chr5 (135-294)||(2795544-2795703)
chr5 (152-295)||(4047450-4047593)
chr5 (135-292)||(11375980-11376138)
chr5 (209-292)||(32019984-32020067)
chr5 (209-292)||(35469649-35469732)
chr5 (204-292)||(31365950-31366038)
chr5 (204-284)||(41350292-41350372)
chr5 (209-292)||(23995416-23995499)
chr5 (154-267)||(24329660-24329774)
chr5 (152-291)||(16174623-16174762)
chr5 (209-293)||(35151314-35151398)
chr5 (135-290)||(11249960-11250114)
chr5 (135-267)||(9184228-9184360)
chr5 (135-199)||(28629899-28629964)
chr5 (209-273)||(30574181-30574245)
chr5 (135-275)||(33072697-33072840)
chr5 (135-294)||(30328328-30328484)
chr5 (152-284)||(39990047-39990178)
chr5 (135-289)||(40512972-40513126)
chr5 (152-284)||(34578049-34578181)
chr5 (133-200)||(3737968-3738035)
chr5 (155-284)||(15190913-15191043)
chr5 (209-292)||(16161039-16161122)
chr5 (209-295)||(7162936-7163022)
chr5 (237-290)||(30893752-30893805)
chr5 (137-201)||(32663765-32663830)
chr5 (204-292)||(12641993-12642081)
chr5 (256-292)||(19743247-19743283)
[»] chr6 (34 HSPs)
chr6 (136-294)||(31169761-31169920)
chr6 (146-284)||(17141306-17141445)
chr6 (161-294)||(17596388-17596521)
chr6 (133-296)||(6016874-6017038)
chr6 (133-294)||(34692372-34692534)
chr6 (133-292)||(10887047-10887207)
chr6 (137-282)||(1017788-1017934)
chr6 (135-291)||(8977467-8977624)
chr6 (135-295)||(17552584-17552744)
chr6 (135-292)||(27819627-27819787)
chr6 (155-296)||(28943765-28943906)
chr6 (155-294)||(14228124-14228263)
chr6 (135-293)||(29863301-29863460)
chr6 (133-294)||(18332686-18332848)
chr6 (135-297)||(33017745-33017907)
chr6 (209-298)||(12454160-12454249)
chr6 (133-265)||(30623344-30623477)
chr6 (209-284)||(23936384-23936459)
chr6 (135-294)||(2830679-2830838)
chr6 (133-292)||(24979149-24979309)
chr6 (209-293)||(29065424-29065508)
chr6 (209-293)||(29120277-29120361)
chr6 (152-291)||(31069583-31069722)
chr6 (209-281)||(31503837-31503909)
chr6 (162-293)||(31568157-31568288)
chr6 (224-297)||(3261188-3261261)
chr6 (135-254)||(22974611-22974730)
chr6 (135-254)||(23813671-23813790)
chr6 (209-264)||(3484725-3484780)
chr6 (209-292)||(29074438-29074521)
chr6 (209-292)||(29079202-29079285)
chr6 (209-292)||(29107011-29107094)
chr6 (209-290)||(17154718-17154799)
chr6 (135-254)||(5362931-5363050)
[»] scaffold0618 (1 HSPs)
scaffold0618 (146-290)||(8416-8560)
[»] chr4 (55 HSPs)
chr4 (151-298)||(23438192-23438339)
chr4 (133-295)||(27019278-27019441)
chr4 (133-294)||(17409842-17410004)
chr4 (133-294)||(19450898-19451060)
chr4 (133-292)||(47326892-47327052)
chr4 (133-292)||(47341688-47341848)
chr4 (133-291)||(16667385-16667544)
chr4 (133-295)||(19468212-19468375)
chr4 (135-295)||(40049579-40049739)
chr4 (135-294)||(49181092-49181252)
chr4 (136-291)||(52391319-52391475)
chr4 (133-294)||(51691360-51691521)
chr4 (133-292)||(23545494-23545654)
chr4 (133-296)||(27362409-27362573)
chr4 (135-295)||(39876851-39877011)
chr4 (135-295)||(50352323-50352483)
chr4 (133-295)||(8736808-8736970)
chr4 (133-289)||(24684854-24685012)
chr4 (177-292)||(36971337-36971452)
chr4 (133-295)||(54495634-54495797)
chr4 (209-295)||(18882264-18882350)
chr4 (140-293)||(25843316-25843473)
chr4 (151-295)||(41415554-41415698)
chr4 (135-280)||(2096891-2097037)
chr4 (209-295)||(44916640-44916726)
chr4 (135-295)||(7349709-7349869)
chr4 (135-294)||(9759140-9759299)
chr4 (133-284)||(19838699-19838849)
chr4 (152-294)||(34941315-34941458)
chr4 (152-281)||(10389279-10389408)
chr4 (213-295)||(42479889-42479971)
chr4 (147-294)||(33632201-33632348)
chr4 (135-291)||(23553590-23553747)
chr4 (152-293)||(29190815-29190956)
chr4 (173-274)||(1378077-1378178)
chr4 (177-266)||(39216084-39216173)
chr4 (152-275)||(37784877-37785001)
chr4 (220-292)||(40682539-40682609)
chr4 (208-248)||(50945519-50945559)
chr4 (173-284)||(55813922-55814034)
chr4 (177-291)||(51070399-51070511)
chr4 (133-254)||(39539482-39539604)
chr4 (224-294)||(49228764-49228834)
chr4 (204-292)||(53961412-53961500)
chr4 (209-260)||(3085740-3085791)
chr4 (209-284)||(10658425-10658500)
chr4 (209-284)||(10872570-10872645)
chr4 (161-275)||(16069224-16069339)
chr4 (237-284)||(32279194-32279241)
chr4 (235-282)||(49332959-49333006)
chr4 (177-295)||(53376405-53376524)
chr4 (133-234)||(13009813-13009915)
chr4 (213-275)||(41488735-41488797)
chr4 (245-297)||(3085801-3085853)
chr4 (181-284)||(38222353-38222457)
[»] scaffold0111 (1 HSPs)
scaffold0111 (133-295)||(37111-37274)
[»] scaffold0036 (1 HSPs)
scaffold0036 (133-292)||(94018-94178)
[»] scaffold0061 (1 HSPs)
scaffold0061 (135-294)||(52777-52936)
[»] scaffold0017 (1 HSPs)
scaffold0017 (135-294)||(145698-145857)
[»] scaffold0136 (1 HSPs)
scaffold0136 (209-284)||(1451-1526)
[»] scaffold0727 (1 HSPs)
scaffold0727 (135-291)||(5711-5868)
[»] scaffold0305 (2 HSPs)
scaffold0305 (155-292)||(17996-18134)
scaffold0305 (177-292)||(17788-17903)
[»] scaffold0011 (1 HSPs)
scaffold0011 (152-293)||(13123-13264)
[»] scaffold0229 (1 HSPs)
scaffold0229 (229-292)||(24527-24590)
[»] scaffold0149 (1 HSPs)
scaffold0149 (135-275)||(22480-22625)
[»] scaffold0018 (1 HSPs)
scaffold0018 (243-295)||(182171-182223)
[»] scaffold0074 (1 HSPs)
scaffold0074 (209-292)||(45497-45580)
[»] scaffold0631 (1 HSPs)
scaffold0631 (209-275)||(519-585)
[»] scaffold0012 (1 HSPs)
scaffold0012 (133-171)||(48503-48541)
[»] scaffold0009 (1 HSPs)
scaffold0009 (209-281)||(191326-191397)


Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 40330586 - 40330216
Alignment:
Q  1 gctaatttaaaaagcagttacaaaaatagttactattttaaaataatcaaagacacaataactattacttgtgtaacatgatcatagacatagtatagca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  40330586 gctaatttaaaaagcagttacaaaaatagttactattttaaaataatcaaagacacattaactattacttgtgtaacatgatcatagaaatagtttagca 40330487  T
Q  101 gccatagtaaactattgatgtttgtctaatata-----cattgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttatt 195  Q
    ||||||||||||||||||||||||| ||| |||     |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40330486 gccatagtaaactattgatgtttgtttaacatatgcaacattacgcatgataaaacaattaaaaatagtaacttttaattgaaaacaacaataatttatt 40330387  T
Q  196 aaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||| ||     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  40330386 aaaaagcg-----tttaatataaaatgaacaagttccaagataaaattactattttaaattttttaacatgtacaaattcgcacatgattgaaaaaccct 40330292  T
Q  296 aaagtaaaagctttcaacaattggtaattgggagagaaatattagagttgaagagctaacttattggtattaaact 371  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40330291 taagtaaaagctttcaacaattggtaattgggagagaaatattagagttgaagagctaacttattggtattaaact 40330216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 13495331 - 13495472
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| |||||||| ||||||| |||||||||||| | |||| |||||||||||||| |||||||||||| ||||||||||| ||    
T  13495331 aactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaaattactactt 13495430  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| || ||| ||||| ||||||| |||||||| |||||||    
T  13495431 taaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 38389465 - 38389628
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  38389465 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 38389564  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| ||||||||| | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  38389565 caagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 38389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 54527866 - 54527707
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  54527866 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttc 54527767  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||| ||||||||  |||||||||||| ||||||||| ||||||| ||||| || ||||||    
T  54527766 caatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 10307787 - 10307947
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    ||||||||||||||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  10307787 attgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 10307886  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  10307887 tgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 10307947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 40497084 - 40497224
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||| ||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||| |||  ||| |||||| ||    
T  40497084 caactaaaagtagtaactttttattgaaatcaacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaaagttactactt 40497183  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| || ||| ||||| ||||||| |||||||| ||||||    
T  40497184 taaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 1569305 - 1569191
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||||||||||||||||||| |||   |||| | |||||||||||||||||||||||| ||||| ||| ||||||||| || ||||||||||| |||||     
T  1569305 aaaacaacaataatttattagaaagttacatatctaatataaaatgaacaagttccaatacaaagttattattttaaacttcttaacatgtacgaattta 1569206  T
Q  277 cacatgattgaaaaa 291  Q
     ||||||| ||||||    
T  1569205 tacatgatagaaaaa 1569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 2571289 - 2571449
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  2571289 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 2571388  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  2571389 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 2571449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 42180070 - 42180234
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||| | ||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  42180070 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatgtacaagttc 42180169  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||| ||||||||  ||||||||| || ||||||||| ||||||| |||||||| |||||| ||||    
T  42180170 caatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaatccta 42180234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 284
Target Start/End: Original strand, 11610935 - 11611084
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   ||||||||||    
T  11610935 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacacaagttcca 11611033  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| ||||||||    
T  11611034 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgat 11611084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 273
Target Start/End: Complemental strand, 38786468 - 38786343
Alignment:
Q  147 aaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattact 246  Q
    |||||||||||||||||||| |||| |||||||| |||||| |||||||||||||  |||  |||| ||||||||  |||| || |||  ||||||||||    
T  38786468 aaaacaactaaaaatagtaattttttattgaaaataacaattatttattaaaaaa-tacacatttagtataaaatccacaaatttcaaatcaaaattact 38786370  T
Q  247 attttaaattttttaacatgtacaaat 273  Q
    |||||||| || ||||||||| |||||    
T  38786369 attttaaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 12515631 - 12515471
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||| ||| ||||||| |||||  |||||   | || ||||||| ||||||  |||||||| |    
T  12515631 attgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccta 12515532  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  12515531 tgcaaagttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaaccct 12515471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 36426512 - 36426408
Alignment:
Q  189 atttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaa 288  Q
    |||||||||||| | |||| |||||||| ||||| |||||||||||| ||||||||| | |||||| || |||||||||  |||||| |||||||| |||    
T  36426512 atttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatttacacatgatagaa 36426413  T
Q  289 aaacc 293  Q
    |||||    
T  36426412 aaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 51618070 - 51618229
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||||||||||||  || || |||| | |||||| ||||||| ||||||||||| |    || ||||||| |||||| ||||||||||    
T  51618070 attgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaatat---atatttaatacaaaatgtacaagttcca 51618166  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |  |||| |||| |||| ||| || ||||||||| ||||||| |||||||| |||||||||||    
T  51618167 atgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccta 51618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 53794784 - 53794904
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||| |||||||||||| ||||| || ||||||||  |||||||||||||||||||   |||| |||||||||||||||| ||||| ||    
T  53794784 attgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatatttaatataaaatgaataagtttca 53794883  T
Q  234 agacaaaattactattttaaa 254  Q
    ||| ||| |||  ||||||||    
T  53794884 agataaagttataattttaaa 53794904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 295
Target Start/End: Original strand, 23523036 - 23523127
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| |||||||| ||||| |||||||||||| ||||||||| | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  23523036 acatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 23523127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 51401535 - 51401629
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaagtaaa 303  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| || ||||||||| |||||||  |||| || ||||||||||||| ||||    
T  51401535 tttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacataatagaaaaaccctaaattaaa 51401629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 2566580 - 2566661
Alignment:
Q  212 aatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||| ||||||||  |||||| |||||||| ||||||||    
T  2566580 aatacaaaatgtacaagtttcaatacaaaattactattttaaattttctaacatgtgtaaatttgcacatgatagaaaaacc 2566661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 39364953 - 39364872
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||||||||||||| ||||||| ||||||||| ||||||||| ||| || ||||||||| ||||||| || |||||||||||    
T  39364953 tttaatataaaatgcacaagttacaagacaaagttactatttaaaacttgttaacatgtgcaaatttgcaaatgattgaaaa 39364872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 3863350 - 3863509
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||  ||||||||||| |||||||| || |||| ||| |||||||  | |||| ||||||||||||   ||||||||||    
T  3863350 attgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaag-ctacatatttaatataaaaaacacaagttcca 3863448  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||  ||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  3863449 agctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 8165664 - 8165823
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||  |||||||||||| |||||||||||||  ||| |||||||| || ||||||  ||||     |   ||||||| ||||| ||||||||    
T  8165664 acattgcacattttaaaacaactaataatagtaacttttttttggaaaacaacgattatttatacaaaagtttaagagttaatattaaatgtacaagttc 8165763  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||| ||||||||  ||||||||| || ||||||||| ||||||| |||||||| ||||||    
T  8165764 caatacaaaatttatattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 292
Target Start/End: Original strand, 20938077 - 20938235
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatga-acaagttcc 232  Q
    |||||||||| |||   |||||||| || |||||||| ||||||||| |||||| ||| ||||||||   |||| ||||||||||||  | |||||||||    
T  20938077 attgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaatt-acatatttaatataaaaaaacacaagttcc 20938175  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| |||| |||||| |||||| || ||| ||||| ||||||| |||||||| |||||||    
T  20938176 aagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 20938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 37444167 - 37444250
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataa 218  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||| ||||||| | |||||||||| | ||||| |||||||||    
T  37444167 attgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaatctacatggttaatataa 37444250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 31318736 - 31318818
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||||||| ||||| |||||||||||  ||||||| |||| ||||| || ||||||||| ||||||| |||||||| ||||||    
T  31318736 tttaatattaaatgtacaagttccaatgcaaaatttctatcttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 37055524 - 37055362
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||| ||| ||||  |||||||||||||||||||  ||||||||  |||||| ||||||||||||     ||  |||||||||||   |||||||||     
T  37055524 attgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaaacacaagttccg 37055425  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    | ||||  ||||||||||||| || |||| |||| ||||||| |||||||| |||||| ||||    
T  37055424 atacaactttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaatccta 37055362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 27549556 - 27549721
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaac---ttttaattgaaa-acaacaataatttattaaaaaacgacatgtttaata---taaaatgaac 225  Q
    |||||||||||| |||||||||||||| ||||||    |||||||| ||| ||| |||| |||| | |||||   ||||  ||||||   ||||||| ||    
T  27549556 acattgcacatgttaaaacaactaaaagtagtaatattttttaattaaaatacatcaattatttgtcaaaaagttacatagttaataatgtaaaatgtac 27549655  T
Q  226 aagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||||  |||||||| |||||| | ||||||||||||||||| ||||||| ||||| || ||||||    
T  27549656 aagttataagacaaacttactactctaaattttttaacatgtgcaaatttgcacataatagaaaaa 27549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 9710962 - 9711030
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaa 200  Q
    |||||||||||| |||||||||||||| |||||| |||| |||| ||||||||||| ||| ||||||||    
T  9710962 acattgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaaa 9711030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 295
Target Start/End: Complemental strand, 16875165 - 16875022
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| ||||||||| ||||||  || |||||||  | |||| ||||||||||||   ||||||| ||||  ||| |||||| ||    
T  16875165 aactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaag-ctacatatttaatataaaaaacacaagtttcaagttaaagttactactt 16875067  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| || ||||||||| ||||||| |||| ||| ||||||||||    
T  16875066 taaacttcttaacatgtgcaaatttgcacacgatagaaaaaccct 16875022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 23638132 - 23638057
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||||||||||||  ||||||| |||||| || |||| ||||||||||| ||||||||| ||||||| | ||||||    
T  23638132 tttaatataaaatacacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatttgctcatgat 23638057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 289
Target Start/End: Complemental strand, 23803178 - 23803049
Alignment:
Q  161 tagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttt 259  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||     || |||||||| ||||  |||||||||||  ||||||| |||||||||| || |    
T  23803178 tagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaacttct 23803079  T
Q  260 taacatgtacaaatttccacatgattgaaa 289  Q
    |||||||| ||||||| || ||||| ||||    
T  23803078 taacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 50364228 - 50364348
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||||||||| ||||||||||| |||||| ||| |||||||    |||| ||||||||||||   |||||||||||| |||| |||||| ||    
T  50364228 aactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagtt-acatatttaatataaaaaacacaagttccaagtcaaagttactactt 50364326  T
Q  251 taaattttttaacatgtacaaa 272  Q
    |||| || ||| ||||| ||||    
T  50364327 taaacttcttagcatgtgcaaa 50364348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 13879934 - 13879846
Alignment:
Q  165 aacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaa 253  Q
    ||||||| ||||||||| ||||| ||||||||||||   |||| |||||||| ||||||||| ||| ||| ||||  ||||| ||||||    
T  13879934 aactttttattgaaaaccacaattatttattaaaaatatacatatttaatattaaatgaacaggtttcaatacaaccttacttttttaa 13879846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 26486521 - 26486405
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    |||| ||||||||| ||||| ||| | ||| ||||  ||||| |||||||||||||| | || |||||||||||||  ||||||| |||   ||  ||||    
T  26486521 taaagcaactaaaagtagtagcttattattaaaaa--acaattatttattaaaaaactatatatttaatataaaatacacaagtttcaaattaattttac 26486424  T
Q  246 tattttaaattttttaaca 264  Q
    |||||||| ||||||||||    
T  26486423 tattttaatttttttaaca 26486405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 41541404 - 41541333
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    |||| |||||||| ||||| ||||||| ||| | ||| ||||||||||||| |||||| ||||| |||||||    
T  41541404 acatatttaatattaaatgtacaagtttcaatataaatttactattttaaactttttatcatgtgcaaattt 41541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 48346446 - 48346365
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||||||| | |||||||||| ||||| |||| |||||||| || ||||||||| ||||||| ||||| || |||||||    
T  48346446 tttaatataaaatca-caagttccaaaacaaacttaccattttaaa-ttgttaacatgttcaaatttacacattatagaaaaac 48346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 2379227 - 2379164
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    |||||||||| |||||||||||||| |||||| |||| ||||  || |||||| ||||||||||||    
T  2379227 attgcacatgttaaaacaactaaaagtagtaagtttttattg--aataacaattatttattaaaaa 2379164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 38785975 - 38786029
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaac 263  Q
    |||||||||||| | ||||||||||| |||||||| |||||||||| || |||||    
T  38785975 tttaatataaaacgtacaagttccaatacaaaatttctattttaaacttcttaac 38786029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 292
Target Start/End: Complemental strand, 15862982 - 15862902
Alignment:
Q  211 taatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||| ||||||||| | ||||  ||||||||||||| |  ||||||||| | ||||| |||||||| |||||||    
T  15862982 taatataaaatgcacaagttccgatacaat-ttactattttaaactccttaacatgtgcgaatttacacatgatagaaaaac 15862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 23320133 - 23320214
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttt 258  Q
    |||||| |||| ||||||||||||   | || |||||||||||||  || |||| ||||||||| |||| ||||||||||||    
T  23320133 aaaacatcaattatttattaaaaagatatatatttaatataaaatacacgagtttcaagacaaatttaccattttaaatttt 23320214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 7940838 - 7940941
Alignment:
Q  162 agtaacttttaattgaaaa--caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttt 259  Q
    |||||||||| ||||||||  ||  ||| ||||||||||||   | || |||||||||||||  | ||||| ||||||||| |||| ||||||||||| |    
T  7940838 agtaacttttcattgaaaaaacactaattatttattaaaaagttatatatttaatataaaatacagaagttacaagacaaatttaccattttaaatttct 7940937  T
Q  260 taac 263  Q
    ||||    
T  7940938 taac 7940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 22103089 - 22103018
Alignment:
Q  168 ttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaa 240  Q
    |||| ||||||||||||||| |||||| |||||| | ||| |||||||| ||||  ||||||||||| |||||    
T  22103089 tttttattgaaaacaacaattatttatgaaaaaatg-catatttaatattaaatatacaagttccaatacaaa 22103018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 25633120 - 25633180
Alignment:
Q  236 acaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||||| |||||||||| || || |||||| || ||||||| |||||||| |||||||||||    
T  25633120 acaaatttactattttgaacttcttaacaagttcaaatttgcacatgatagaaaaacccta 25633180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 46922909 - 46922853
Alignment:
Q  146 taaaacaactaaaaatagtaactttta-attgaaaacaacaataatttattaaaaaa 201  Q
    |||||||||||||||| |||| ||||  ||||||||||||||  |||||||||||||    
T  46922909 taaaacaactaaaaatcgtaatttttttattgaaaacaacaactatttattaaaaaa 46922853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 26682088 - 26682249
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaactttta-attgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||||||||||||| |||||| ||||  ||||||||||||||| |||||||||||| | |||  |||||||||||||| ||||||||||    
T  26682088 attgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacacatttaatataaaatgcacaagttcca 26682187  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| ||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  26682188 agtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 26682249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 146 - 291
Target Start/End: Complemental strand, 34741811 - 34741666
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||  | || |||||||||||||| |||||||| || ||||| |||     
T  34741811 taaaacaactaaaaataacaacttttaattgaaaacaataattatttattaaaaaattatatatttaatataaaatgcacaagttctaatacaaacttat 34741712  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||||||| ||||||||||| |||||||| || ||||| ||||||    
T  34741711 tattttaaactttttaacatgaacaaatttacatatgatagaaaaa 34741666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 290
Target Start/End: Original strand, 44091350 - 44091494
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    ||||||||| |||| || ||| |||| ||||||||||||||| |||||||||||||| |||  |||||||||||||| |||||||| ||  |||| ||||    
T  44091350 taaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttac 44091449  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    || ||||||||| ||||||| | ||||||| |||||||| |||||    
T  44091450 tactttaaatttcttaacatatgcaaatttacacatgatagaaaa 44091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 8284727 - 8284564
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaa-acgacatgtttaatataaaatgaacaagttcc 232  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| ||||  |||||| |||||||||||| || || | |||||||||||||  |||||||||    
T  8284727 attgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaatacacaagttcc 8284628  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||| | || || ||| |||||| || ||||||||||||||||| |||||||| |||||||||||    
T  8284627 aagtcgaagttgctaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaacccta 8284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 26834579 - 26834742
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  26834579 acattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 26834678  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| ||||||||| ||||||||||| |||| || | ||||||| |||||||| ||||||||||    
T  26834679 caagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatgatagaaaaaccct 26834742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 9580269 - 9580106
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| |||||    || |||||||| ||||| |||||||     
T  9580269 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaaaaattatatttaatattaaatgtacaagttt 9580170  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| |||||||| |||||||||| || |||||||||  |||||| ||||||||  |||||||||    
T  9580169 caatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatgataaaaaaaccct 9580106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 31812131 - 31812294
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaa-taatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| ||||||||  | || | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  31812131 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 31812230  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| ||||||||| |||||||| || |||| |||| ||||||| |||||||| ||||||||||    
T  31812231 caagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccct 31812294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 39024998 - 39024855
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||| || |||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||| ||||||| |||| |||||| ||    
T  39024998 caactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttactactt 39024899  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||| || ||| ||||| ||||||| |||||||| |||||||||    
T  39024898 taaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 39024855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 7140616 - 7140456
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||| | |||| ||||||||||||   ||||||||||    
T  7140616 attgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaa-ctacatatttaatataaaaaacacaagttcca 7140518  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||  |||||||||| |||||| || |||| |||| ||||||| |||||||| ||||||||||    
T  7140517 agttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccct 7140456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 6818054 - 6818198
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||||||||||||||  ||||||||  |||||| ||||||||||||     ||  ||||||||||||| ||||||||| | ||||  |||||||||    
T  6818054 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatgcacaagttccgatacaattttactattt 6818153  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| || ||||||||||||||||| |||||||| ||||||||||    
T  6818154 taaacttcttaacatgtacaaatttgcacatgatagaaaaaccct 6818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 12132001 - 12132164
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||||  |||||||| ||| ||||||| |||||||| | ||||  ||||||||||||   | || ||||||||||||||  |||||||    
T  12132001 acattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaatgttcaagttc 12132100  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| ||||| |||||| ||||||||| ||||||||| ||| ||| || ||||| ||||||||||    
T  12132101 caatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaaccct 12132164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 38843722 - 38843885
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  38843722 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttc 38843821  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| | ||||||  ||||||||| || ||| ||||| ||||||| |||||||| ||||||||||    
T  38843822 caataaaaaatttatattttaaacttcttagcatgtgcaaatttacacatgatagaaaaaccct 38843885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 10129124 - 10129284
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||| |||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||    
T  10129124 attgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttcca 10129222  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||  |||||||||| |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  10129223 agttaaaattactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 10129284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 20514653 - 20514814
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaac-aataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||| ||||| ||| |||||| || | ||||||||  || ||| ||||||||||||   | || |||||||||||||| ||||||||||    
T  20514653 attgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaatgtacaagttcca 20514752  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||||| |||| ||||||||||| ||||| ||| ||||| | |||||||| ||||| ||||    
T  20514753 agacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatgatagaaaacccct 20514814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 293
Target Start/End: Complemental strand, 12189747 - 12189587
Alignment:
Q  134 cattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    ||||||||||| |||||||||||| | || ||||||||  ||||||| ||||||| ||||||| |||||    || |||||||| ||||| |||||||||    
T  12189747 cattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgtacaagttcc 12189648  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    || | ||| || |||||||||| || ||| ||||| ||||||| |||||||| ||||||||    
T  12189647 aatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 12189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 293
Target Start/End: Complemental strand, 12434175 - 12434015
Alignment:
Q  134 cattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    ||||||||||| |||||||||||| | || ||||||||  ||||||| ||||||| ||||||| |||||    || |||||||| ||||| |||||||||    
T  12434175 cattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgtacaagttcc 12434076  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    || | ||| || |||||||||| || ||| ||||| ||||||| |||||||| ||||||||    
T  12434075 aatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 12434015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 14816283 - 14816124
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| ||||||||||| |||||||| ||||||| | ||||||||||   |||| |||||||| ||||  |||||||  |    
T  14816283 attgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacacaagtttta 14816185  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| ||||||||| ||| ||||| ||||||| |||||||| |||||||||    
T  14816184 agtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 14829457 - 14829616
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| ||||||||||| |||||||| ||||||| | ||||||||||   |||| |||||||| ||||  |||||||  |    
T  14829457 attgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacacaagtttta 14829555  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| ||||||||| ||| ||||| ||||||| |||||||| |||||||||    
T  14829556 agtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14829616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 14961771 - 14961660
Alignment:
Q  184 caataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatga 283  Q
    |||| ||||||||||||   | || |||||| ||||||| ||||||||||| ||||||||||||||||||| || ||| ||||| ||||||| |||||||    
T  14961771 caatcatttattaaaaagttaaatatttaatttaaaatgcacaagttccaatacaaaattactattttaaacttcttagcatgtgcaaatttgcacatga 14961672  T
Q  284 ttgaaaaaccct 295  Q
    | ||||||||||    
T  14961671 tagaaaaaccct 14961660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 35678432 - 35678270
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||||| |||||| | ||||||||||   |||| ||||||||||| |  ||||||| ||    
T  35678432 attgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaa-tacacaagtttca 35678334  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| ||||||||  |||||||||||    
T  35678333 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaaccctaa 35678270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 28014941 - 28014855
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  28014941 tttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 28014855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 3306212 - 3306052
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| |||||| |||| ||||||| ||||||| |||||  |||||   | || ||| ||| ||||||  |||||| |||    
T  3306212 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttcaagtttcaa 3306113  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  3306112 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 3306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 45005988 - 45006151
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| ||||     || |||||||| | ||| ||| ||||    
T  45005988 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattagatgtacatgttc 45006087  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| |  ||||| |||||||||||    
T  45006088 caatacaaaatt-ctattttaaacttcttaacatgtgcaaatttgcttatgatagaaaaacccta 45006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 2161408 - 2161567
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||  ||||||  ||||||||||    
T  2161408 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaattcaaaatgttcaagttccaa 2161507  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  2161508 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 2161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 7393359 - 7393253
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||||| |||| ||||||||||||   | || |||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||| ||||||      
T  7393359 aaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacatgtgcaaattcg 7393261  T
Q  277 cacatgat 284  Q
    ||||||||    
T  7393260 cacatgat 7393253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 27874764 - 27874678
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||| ||||| ||||||||||| ||||||||  ||||||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  27874764 tttaatattaaatgtacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 27874678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 4080531 - 4080395
Alignment:
Q  155 taaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaa 253  Q
    ||||| ||||||||||| ||||||||| |||||| | ||| ||||||   |||| |||||||| ||||| ||||||| |||| |||| |||||| |||||    
T  4080531 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcacaagtttcaagtcaaagttactactttaa 4080433  T
Q  254 attttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| ||| ||||| ||||||| |||||||| ||||||    
T  4080432 atttcttatcatgtgcaaatttgcacatgatagaaaaa 4080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 5573312 - 5573466
Alignment:
Q  139 cacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagac 237  Q
    |||||| ||||| |||||||||||  || |||| |||||||| ||||||| ||||||||||||  |  || | ||||| |||||| | |||||| ||  |    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaa--gttatatataatacaaaatgtataagttctaatgc 5573409  T
Q  238 aaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||| || ||||||||| || ||||||||||||||||| |||||||| |||||||||    
T  5573410 aaaagtattattttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccc 5573466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 37389438 - 37389539
Alignment:
Q  190 tttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaa 289  Q
    ||||||||||| | |||| |||||||||||||||||||||| ||| ||||| ||| || ||||||||| ||||| |||| |||||| ||||| || ||||    
T  37389438 tttattaaaaatctacatatttaatataaaatgaacaagtttcaaaacaaagttattaatttaaatttcttaacttgtataaatttacacattatagaaa 37389537  T
Q  290 aa 291  Q
    ||    
T  37389538 aa 37389539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 6850735 - 6850607
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    ||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||| ||||||| |||||    || |||||||| ||||| |||||||| |    
T  6850735 attgcacatgacaaaacaactaatagtagtaactttttattgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgtacaagttcaa 6850636  T
Q  234 agacaaaattactattttaaattttttaa 262  Q
    | ||||| || ||||| |||| |||||||    
T  6850635 atacaaattttctattataaactttttaa 6850607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 4084680 - 4084544
Alignment:
Q  155 taaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaa 253  Q
    ||||| ||||||||||| ||||||||| |||||| | ||| ||||||   |||| |||||||| ||||| | ||||| |||| |||| |||||| |||||    
T  4084680 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcataagtttcaagtcaaagttactactttaa 4084582  T
Q  254 attttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| ||| ||||| ||||||| |||||||| ||||||    
T  4084581 atttcttatcatgtgcaaatttgcacatgatagaaaaa 4084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 4102987 - 4102851
Alignment:
Q  155 taaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaa 253  Q
    ||||| ||||||||||| ||||||||| |||||| | ||| ||||||   |||| |||||||| ||||| | ||||| |||| |||| |||||| |||||    
T  4102987 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcaaaagtttcaagtcaaagttactactttaa 4102889  T
Q  254 attttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| ||| ||||| ||||||| |||||||| ||||||    
T  4102888 atttcttatcatgtgcaaatttgcacatgatagaaaaa 4102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 26364072 - 26363987
Alignment:
Q  210 ttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||| ||||||  ||||||||||  |||| |||||||||||||||| ||||||||  ||||||| |||||||| ||||||||||    
T  26364072 ttaatagaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaaccct 26363987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 13328081 - 13327942
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||||||||||| ||||||||| |||||| ||| ||||||     |||| ||||||||||||   ||||||| |||| |||| |||||| ||    
T  13328081 aactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgtt-acatatttaatataaaaaacacaagtttcaagtcaaagttactaatt 13327983  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| || ||||||||| ||||||| |||||||| ||||||    
T  13327982 taaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 18567504 - 18567412
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||| ||||||||||||   ||| |||||||| |||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||||    
T  18567504 acatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccta 18567412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 15198968 - 15198898
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||||||| |||  |||| ||||||||| |||||||||||||||| ||||||| |||||||| |||||||||    
T  15198968 acaagttacaatgcaaagttactatttaaaattttttaacatgtgcaaatttgcacatgatagaaaaaccc 15198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 38048078 - 38047949
Alignment:
Q  152 aactaaaaatagtaacttttaattga-aaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||||||||||||||| ||| | ||||| |||| |||||||||||||    || ||||| |||||||  |||| |||||||||||| |||| | ||    
T  38048078 aactaaaaatagtaacttttcattcacaaacaccaattatttattaaaaaaatgtatatttaagataaaatacacaaattccaagacaaagttacca-tt 38047980  T
Q  251 taaattttttaacatgtacaaatttccacat 281  Q
    ||||||  ||||||||| ||||||| |||||    
T  38047979 taaattacttaacatgtgcaaatttgcacat 38047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 9801780 - 9801849
Alignment:
Q  226 aagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||| |||| |||| |||||| |||||| || ||||||||| ||||||| |||||||||||||||||||    
T  9801780 aagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgattgaaaaaccct 9801849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 267
Target Start/End: Complemental strand, 10974701 - 10974583
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaatta 244  Q
    |||| ||||||||| ||||||| ||| |||||||| ||| ||  |||||||||||||  |||| |||||||||||||| |||||    |||| ||| |||    
T  10974701 taaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaatgtacaag----aagataaagtta 10974606  T
Q  245 ctattttaaattttttaacatgt 267  Q
    ||| |||||| ||||||||||||    
T  10974605 ctaatttaaactttttaacatgt 10974583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 7977990 - 7978062
Alignment:
Q  226 aagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaa 298  Q
    ||||| ||| |||||||||| |||||||| |||||||||| | ||||||| || ||||| |||||||||||||    
T  7977990 aagtttcaatacaaaattaccattttaaactttttaacatttgcaaatttgcatatgatagaaaaaccctaaa 7978062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 39701960 - 39701802
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||||||||  |||||||| |||||| | | |||||||    |||| ||||||||||||   |||| || ||    
T  39701960 attgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagtt-acatatttaatataaaaaacacaaatttca 39701862  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| ||||||||    
T  39701861 agtcaaagttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaacc 39701802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 7750688 - 7750741
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaata 188  Q
    |||||||||| |||||||||||||| ||| ||||||| ||||||||||| ||||    
T  7750688 attgcacatgttaaaacaactaaaagtagcaactttttattgaaaacaataata 7750741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 19343904 - 19343831
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    ||||||| |||| ||||||||||| ||||||  | ||||||||| ||||||| ||||||||  |||||||||||    
T  19343904 acaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaaccctaa 19343831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 1513246 - 1513309
Alignment:
Q  190 tttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaa 254  Q
    ||||||||||| | |||| ||||||| |||||| ||||||| |||||| ||||||||||||||||    
T  1513246 tttattaaaaagctacatatttaatacaaaatgcacaagtttcaagac-aaattactattttaaa 1513309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 9825063 - 9825131
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||| |||||||||  ||| ||||||| ||||||||||||| || |||| |||||||| |||||||    
T  9825063 acaagtttcaagacaaacctaccattttaatttttttaacatgtgcatatttacacatgatagaaaaac 9825131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 37264519 - 37264587
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaa 200  Q
    |||||||||||| |||||||||||||| |||||| || | |||||||| ||| ||| ||||||||||||    
T  37264519 acattgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaaaa 37264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 1203724 - 1203783
Alignment:
Q  237 caaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||||||||||| |||||| || ||| ||||| ||||||| |||||||| |||||||||||    
T  1203724 caaaattactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccta 1203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 9743888 - 9744001
Alignment:
Q  141 catgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaa 239  Q
    |||| ||| |||||||||| |||||| |||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   | |||||||||| |||    
T  9743888 catgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacataagttccaagtcaa 9743986  T
Q  240 aattactattttaaa 254  Q
    | |||||| ||||||    
T  9743987 agttactactttaaa 9744001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 32195960 - 32195881
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaa 227  Q
    |||| |||||||||||| ||| |||| ||||||||  ||||  |||||||||||  | |||| |||||||||||||||||||    
T  32195960 taaagcaactaaaaataataattttttattgaaaa--acaactatttattaaaatgctacatatttaatataaaatgaacaa 32195881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 33448862 - 33448817
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatg 222  Q
    |||| |||||| |||||||||||||| |||| ||||||||||||||    
T  33448862 aaaataacaattatttattaaaaaactacatatttaatataaaatg 33448817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 44222591 - 44222526
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    |||||||||| |||| ||||||||| ||  | ||||| ||| ||||||||||| ||||||||||||    
T  44222591 attgcacatgttaaagcaactaaaactaacatctttttattaaaaacaacaattatttattaaaaa 44222526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  244 actattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||||| || ||||||||| ||||||| |||||||| |||||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 34869682 - 34869614
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaa 200  Q
    ||||||||| || |||||||||||| |||||||||||||  ||  ||||||||||| ||||||| ||||    
T  34869682 acattgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattatttattcaaaa 34869614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 15411780 - 15411617
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| |||||| |||| |||||||| |||||||||||||||||||| | |||| |||||||||||||||||||||| ||    
T  15411780 attgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaatgaacaagtttca 15411681  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    ||||||| ||||||||||||| || ||||||||| ||||||| |||||| | ||||| ||||||    
T  15411680 agacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaacccctaa 15411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 139 - 294
Target Start/End: Original strand, 9747341 - 9747497
Alignment:
Q  139 cacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagac 237  Q
    |||||| ||||  |||||||| |||||||| || |||||||| ||||||  |||| | ||||| | |||| |||||||||||||||||||||||||||||    
T  9747341 cacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaatgaacaagttccaagac 9747440  T
Q  238 aaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||||||||||||||||| || |||||||||  |||||| |||||||| |||||||||    
T  9747441 aaaattactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 9747497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 275
Target Start/End: Complemental strand, 37471888 - 37471757
Alignment:
Q  146 taaaacaactaaaaatagtaactttta-attgaaa-acaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaatt 243  Q
    |||| |||||||||||||||  ||||  ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||    
T  37471888 taaagcaactaaaaatagtattttttttattgaaagacaacaataatttattaaaaaactacatatttaatataaaatgaacaagtttcaagacaaagtt 37471789  T
Q  244 actattttaaattttttaacatgtacaaattt 275  Q
    ||||||||||| || ||||||||| |||||||    
T  37471788 actattttaaacttcttaacatgtgcaaattt 37471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 284
Target Start/End: Complemental strand, 12919458 - 12919358
Alignment:
Q  184 caataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatga 283  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||  |||||| |||||||    
T  12919458 caataatttattaaaaaactacatatttaatataaaatgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatga 12919359  T
Q  284 t 284  Q
    |    
T  12919358 t 12919358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 43806378 - 43806540
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||| ||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| |||||||     
T  43806378 acattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttt 43806477  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| |||||||| |||||||||| |||||||||||| ||||||| |||| ||| |||||||||    
T  43806478 caatacaaaatttctattttaaactttttaacatgtgcaaatttacacacgatagaaaaaccc 43806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 27665201 - 27665041
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   ||||||||||    
T  27665201 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacacaagttcca 27665103  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| |||||||| ||||||||||    
T  27665102 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 27665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 292
Target Start/End: Original strand, 45062229 - 45062376
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaatta 244  Q
    |||||||| ||||| | ||||||||| ||| |||| ||| ||| ||||||||||||   ||||||||||||||||||| ||||||||||| | ||| |||    
T  45062229 taaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatgcacaagttccaaaataaagtta 45062328  T
Q  245 ctattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||| || || |||| |||| ||||||| |||||||| |||||||    
T  45062329 ctattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 12016687 - 12016847
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||    
T  12016687 attgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttcca 12016785  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||  |||||||||| |||||| || |||| |||| ||||||| |||||||| ||||||||||    
T  12016786 agttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccct 12016847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 295
Target Start/End: Complemental strand, 38248555 - 38248417
Alignment:
Q  157 aaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatt 256  Q
    ||||||| || |||| ||| ||| ||||||| |||||  ||||||  | || ||||||| ||||||  ||||||||||   |||||||||||||||||||    
T  38248555 aaaatagcaagtttttattaaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttccaatgtaaaattactattttaaatt 38248456  T
Q  257 ttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    | ||||||||| ||||||| |||||||| ||||||||||    
T  38248455 tcttaacatgtgcaaatttgcacatgatagaaaaaccct 38248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 14377445 - 14377605
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||||| |||||| |||| ||||||    |||| ||||||||||||   ||||||| ||    
T  14377445 attgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagtt-acatatttaatataaaaaacacaagtttca 14377543  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| |||||| || ||| ||||||||||||| |||||||| ||||| ||||    
T  14377544 agtcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaatccct 14377605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 25998160 - 25997999
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| |   ||||||| |||||||| ||||||| ||||||||||||   |||| |||| ||| ||||||||||||||||    
T  25998160 attgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatatttattattaaatgaacaagttcca 25998061  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |  |||||||| | |||||| ||||||||||  | ||||||| ||| |||| ||||||||||    
T  25998060 atgcaaaattaattttttaatttttttaacacatgcaaatttgcacgtgatagaaaaaccct 25997999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 5583715 - 5583555
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  5583715 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 5583616  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| | |||||| ||||||||||    
T  5583615 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaaccct 5583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 7720133 - 7720293
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||  || || ||| ||||    
T  7720133 acattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtttaatatttaatactaagtgtacacgttc 7720232  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| |||||||| |||| ||||| ||||||||| || ||||||| |||||||| |||||||    
T  7720233 caatacaaaatttctatcttaaactttttaacacgtgcaaatttgcacatgatagaaaaac 7720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 9450320 - 9450438
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    ||||||||||| |||||||||||||  | || ||||||| |||||  |||| |||||| |||||  ||||| ||||||||| ||||||||| || ||||     
T  9450320 aaaacaacaattatttattaaaaaattatatatttaatagaaaatacacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttg 9450419  T
Q  277 cacatgattgaaaaaccct 295  Q
    |||||||| ||||||||||    
T  9450420 cacatgatagaaaaaccct 9450438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 292
Target Start/End: Original strand, 23932585 - 23932743
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||||||||||||||  ||||||||  |||||| ||||||||||||     ||  ||||||||||||| |||||||||     
T  23932585 attgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatgcacaagttccg 23932684  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    | ||||  ||||||||||||| || |||| || | ||||||| |||||||| |||||||    
T  23932685 atacaattttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaac 23932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 34214107 - 34213950
Alignment:
Q  137 tgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgttt--aatataaaatgaacaagttcca 233  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||| |||||| ||||  ||||||   | || |||  |||| ||||||  |||||||||    
T  34214107 tgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatatttttaataaaaaatgttcaagttcca 34214008  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |   |||||||||||||||||||| ||||||||| ||||||| |||| ||| ||||||    
T  34214007 atgaaaaattactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaa 34213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 16126716 - 16126556
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||| |||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||| ||    
T  16126716 attgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagtttca 16126618  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||  ||| |||||| |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  16126617 agttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 16126556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 19228446 - 19228601
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||    |||| ||||||| ||||   ||||||||||    
T  19228446 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagtt-acatatttaatacaaaaaacacaagttcca 19228544  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||    
T  19228545 agtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 295
Target Start/End: Complemental strand, 24729718 - 24729574
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaacaac-aataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||||||||| |||| |||||||| ||  ||| ||||||||||||   |  |  |||||| |||||  |||| ||||||  |||| |||||||||    
T  24729718 aactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagttactattt 24729619  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  24729618 taaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 24729574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 7757869 - 7757782
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||||||| ||||||  ||||||||||  |||| |||||||||||||||| |||||||||  |||||| |||||||| |||||||||||    
T  7757869 tttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaacccta 7757782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 22162234 - 22162139
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagtt 230  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||    
T  22162234 attgcacatgttaaggcaactaaaagtagtaactttttattgaaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaagtt 22162139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 4576409 - 4576323
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||| ||||| ||||||| ||| |||||||| ||||||||||||| ||||||| | | ||||| |||||||| ||||||||||    
T  4576409 tttaatattaaatgtacaagtttcaatacaaaatttctattttaaatttcttaacatatgcgaatttgcacatgatagaaaaaccct 4576323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 20566175 - 20566017
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||||||| |||| || |||||||| ||||||| ||||||||||| |  |  | ||||||| |||||  ||||||||||    
T  20566175 attgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaatacacaagttcca 20566076  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    | |||||  || || |||||| || |||||||||  |||||| |||||||| |||||||    
T  20566075 atacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 20566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 29157912 - 29157826
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||||| |||||  |||||||||||  |||| ||||||||| |||||| ||||||||| ||||||| |||||||| ||||||||||    
T  29157912 tttaatacaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 29157826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 36731275 - 36731361
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||||||| |||  |||||||| |||||||| |||| ||||||||||| |||||||||  |||||| |||||||| ||||||||||    
T  36731275 tttaatatagaatacacaagttctaagacaaatttaccattttaaatttcttaacatgtgtaaatttacacatgatagaaaaaccct 36731361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 290
Target Start/End: Complemental strand, 2060184 - 2060044
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||| || |||||||| ||| |||| ||||||| |||||||||| | | |||| ||||||||||||   |||| |||||||  ||| |||||| |    
T  2060184 caactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactact 2060085  T
Q  250 ttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||||||| |||||||||  |||||| ||||| || |||||    
T  2060084 ttaaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 4821323 - 4821457
Alignment:
Q  161 tagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttt 259  Q
    ||||||||||| ||||||||| |||||| |||||||||||  | |||| ||||||||||||   ||||||| |||  |||| |||||| |||||| || |    
T  4821323 tagtaacttttcattgaaaaccaacaattatttattaaaag-ctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttct 4821421  T
Q  260 taacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || ||||| ||||||| ||||| || ||||||||||    
T  4821422 tatcatgtgcaaatttgcacataatagaaaaaccct 4821457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 17235006 - 17234952
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttcca 278  Q
    |||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  17235006 acaaattccaatacaaaattactattttaaatttcttaacatgtgcaaatttcca 17234952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 39904205 - 39904074
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| ||||||| ||| |||||||  | |||||||||||||||||   | ||||||||    
T  39904205 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatgtttaatataaaaaacataagttcca 39904107  T
Q  234 agacaaaattactattttaaattttttaacatg 266  Q
    ||  ||| |||||| |||||| || ||||||||    
T  39904106 agttaaatttactactttaaacttcttaacatg 39904074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 284
Target Start/End: Complemental strand, 16919311 - 16919162
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||||||||  |||||||| |||||| ||| |||||||    |||| ||||||||||||   ||||||| ||    
T  16919311 attgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagtt-acatatttaatataaaaaacacaagtttca 16919213  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    || |||| |||||| |||||| || |||| |||| ||||||| ||||||||    
T  16919212 agtcaaagttactactttaaacttgttaatatgtgcaaatttgcacatgat 16919162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 15231906 - 15232009
Alignment:
Q  189 atttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaa 288  Q
    ||||||||||||   |||| |||||||| ||||| |||||||  ||| |||| |||| | |||||| || ||||||||| ||||||| ||||| || |||    
T  15231906 atttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacataatagaa 15232005  T
Q  289 aaac 292  Q
    ||||    
T  15232006 aaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 16123368 - 16123455
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| ||||||||||||   ||||||||| |  ||||||||||| |||||| || ||| ||||| ||||||| |||||||| ||||||    
T  16123368 acatatttaatataaaaaacacaagttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 17265527 - 17265586
Alignment:
Q  237 caaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||| |||||||||||||||| |||||| || |||||||  ||||||| |||||||||||    
T  17265527 caaagttactattttaaatttcttaacaagtgcaaatttggacatgatagaaaaacccta 17265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 12438790 - 12438740
Alignment:
Q  150 acaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    ||||||||||||| |||||||| ||| ||| ||||||| ||||||||||||    
T  12438790 acaactaaaaataataacttttcattaaaaccaacaattatttattaaaaa 12438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 22593372 - 22593318
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    |||||||| ||||||| | ||||||| |||||||||||||||  |||||||||||    
T  22593372 taaaacaattaaaaatggaaactttttattgaaaacaacaattgtttattaaaaa 22593318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 34817575 - 34817629
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    ||||| |||||||||||  |||| || ||||||||||||||| ||||||||||||    
T  34817575 taaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaa 34817629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 2051645 - 2051721
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaat 221  Q
    |||||||||||||| ||| || |||| |||||||| ||||||| ||||||||||||   | || |||||||||||||    
T  2051645 taaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaat 2051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 8770946 - 8770894
Alignment:
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||| ||||||||||| |||||| || ||||||||| ||||||| ||||||||    
T  8770946 caagtcaaaattactactttaaacttcttaacatgtgcaaatttgcacatgat 8770894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 25709557 - 25709399
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattga-aaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||| ||||||||| |||||| |||| ||||| ||||||||||||||||||||||| | || | |||||||| ||||||||||||||||    
T  25709557 attgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaatgaacaagttcca 25709458  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    | ||||| ||||||||||||| || ||||||||| ||||||| |||||||| |||||||    
T  25709457 atacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 7170023 - 7170183
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||||||    
T  7170023 attgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagttccaa 7170122  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    | |||| |||||| |||||| || ||| ||||| ||||||| |||||||| ||||||||||    
T  7170123 gtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 7170183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 47457619 - 47457459
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaactttta-attgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||||||||||||| |||||| ||||  |||||||| |||||| ||||||| |||| | |||  | |||||||||||| | || |||||    
T  47457619 attgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacacatataatataaaatgcataaattcca 47457520  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| ||||||||||||||||||| ||||||| |||||||| |||||||||    
T  47457519 agtcaaagttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaaccc 47457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 304
Target Start/End: Original strand, 19889361 - 19889530
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   ||||||||||    
T  19889361 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacacaagttcca 19889459  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaagtaaaa 304  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| |||||||| |||||||||| || |||||    
T  19889460 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccttaactaaaa 19889530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 4969791 - 4969956
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | ||||| |||||  ||| ||||| | ||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  4969791 acattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatgtacaagttc 4969890  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||||||||    
T  4969891 caatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctaa 4969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 296
Target Start/End: Complemental strand, 24463096 - 24462951
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||| |||||| || | ||||||||||||||  |||||||||||||| |||| |||||||||||||| ||||  |  ||| |||| ||| |||||    
T  24463096 caactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactacatatttaatataaaatgtacaaactttaagtcaaagttattattt 24462997  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||| || ||||||||| ||||||| |||||||| |||| ||||||    
T  24462996 taaacttcttaacatgtgcaaatttgcacatgatagaaatacccta 24462951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 23982897 - 23982753
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||| ||||||||||| ||| ||||| |||||| | ||||||||||   | || |||||||||||||  |||||||||||| |||| |||||| |    
T  23982897 caactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaatacacaagttccaagtcaaagttactact 23982798  T
Q  250 ttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||||||| ||||| ||| ||||||| |||||||| |||||||||    
T  23982797 ttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaaccc 23982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 33343009 - 33343168
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  33343009 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 33343108  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
     ||||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  33343109 tacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 33343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 5909439 - 5909280
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  |||||||||  |||||||||| ||||||||| |||||| |||||||||||  | |||| ||||||||||||   ||||||| ||    
T  5909439 attgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaag-ctacatatttaatataaaaaacacaagtttca 5909341  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| |||||||| |||||||||    
T  5909340 agtcaaagttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaaccc 5909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 46290031 - 46290191
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  46290031 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 46290130  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  46290131 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 46290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 7899601 - 7899487
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||||| ||||||||||||||||    | || |||||||||||||  |||||||  |||||||| |||| ||||||||||||||||||||| |||||||     
T  7899601 aaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaacatgtgcaaatttg 7899502  T
Q  277 cacatgattgaaaaa 291  Q
    |||||||| ||||||    
T  7899501 cacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 41331555 - 41331458
Alignment:
Q  193 attaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||||||| | |||| |||||||||||||| |||||||||||| |||| |||||| ||||||||| ||| ||||| ||||||| |||||||| |||||    
T  41331555 attaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 45501477 - 45501637
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||||| |||||| | |||||||||||  || |||| ||||||| ||||||| || |     || |||||||| ||||| ||||||||    
T  45501477 acattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaatgtacaagttc 45501576  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| |||||||| |||||||||| || |||| |||| ||||||| |||||||| |||||||    
T  45501577 caatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 5833430 - 5833532
Alignment:
Q  189 atttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaa 288  Q
    |||||||||||| | |||| ||||||||| |||| |||||||| ||||| || |||||  |||||| |||||||||||| ||||||| |||||||| |||    
T  5833430 atttattaaaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcacatgatagaa 5833529  T
Q  289 aaa 291  Q
    |||    
T  5833530 aaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 34270315 - 34270441
Alignment:
Q  168 ttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgt 267  Q
    |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||  |||| |||||||||||||||| |||||||||    
T  34270315 tttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgt 34270414  T
Q  268 acaaatttccacatgattgaaaaaccc 294  Q
     ||||||| |||||||| |||||||||    
T  34270415 gcaaatttgcacatgatagaaaaaccc 34270441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 152 - 292
Target Start/End: Complemental strand, 384570 - 384431
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||||||||||| |||||||| ||||||| ||| |||||||  | |||| ||||||||||||  |||||||||||||  ||| |||||| ||    
T  384570 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaaaacaagttccaagttaaagttactactt 384472  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| || ||||||||| ||||||| || ||||| |||||||    
T  384471 taaacttcttaacatgtgcaaatttgca-atgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 9331982 - 9332142
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| ||||||| ||| ||||||     |||| ||||||||||||   ||||||| ||    
T  9331982 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgtt-acatatttaatataaaaaacacaagtttca 9332080  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  9332081 agtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 9332142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 33072076 - 33072161
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||||||| ||||||  ||| ||||||  |||| |||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  33072076 tttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatgatagaaaaaccc 33072161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 39757267 - 39757108
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||| |||| |||||||| ||||||| ||| |||||||  | |||| ||||||||||||   |||| || ||    
T  39757267 attgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacacaaatttca 39757169  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||  ||| ||||||||||||| || ||||||||| ||||||| |||||||| |||||||||    
T  39757168 agttaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 39757108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 290
Target Start/End: Original strand, 28323172 - 28323311
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||| ||| || |||| ||| |||||| | ||  ||||||||||||  | || || ||||||||||| | |||||| || | ||||||| |||||    
T  28323172 caactaaaactagcaagtttttattaaaaacagcgattttttattaaaaaattatatattaaatataaaatgtataagttctaatataaaattattattt 28323271  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||||||||||||||||  |||||| |||||||| |||||    
T  28323272 taaattttttaacatgtgtaaatttacacatgatagaaaa 28323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 29398217 - 29398134
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| || ||||||||| |||||||  ||||||| |||||||    
T  29398217 tttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 293
Target Start/End: Complemental strand, 8091472 - 8091311
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    ||||||||||||  ||| ||||||||| ||| || |||| |||||||| ||| ||| ||||||||||||   | || ||||| | |||||| | |||||     
T  8091472 acattgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagtta 8091373  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||  |||| ||||||||||||| || |||||||||  |||||| |||||||| ||||||||    
T  8091372 caatgcaaagttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 8091311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 12086088 - 12085928
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| |||||||||||  ||||||| ||||||| |||||||||||    | || ||||||||||||   ||||||| ||    
T  12086088 attgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaa-atatttaatataaaaaacacaagtttca 12085990  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || ||||||||||  |||||| || |||  |||| ||||||| |||||||| ||||||||||    
T  12085989 agtcaaaattacttatttaaacttcttattatgtgcaaatttgcacatgatagaaaaaccct 12085928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 19868134 - 19868257
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||| |||||||||| |||||| |||| |||||||| || |||| |||||| |||||   | || |||||||||||||  ||||||| ||    
T  19868134 attgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaatacacaagtttca 19868233  T
Q  234 agacaaaattactattttaaattt 257  Q
    ||||||| |||| ||| |||||||    
T  19868234 agacaaacttaccattctaaattt 19868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 42750309 - 42750396
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatg 222  Q
    |||||| ||| |||| |||||||||||| |||||||| ||||||||||| ||| ||||||||||||   |||  ||||||||||||||    
T  42750309 attgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattatttattaaaaagttacaattttaatataaaatg 42750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 3530268 - 3530122
Alignment:
Q  138 gcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagac 237  Q
    ||||||| |||| ||| ||| |||| ||| |||| ||||||||||||||| |||||||||||||  | || ||| |||||||||| |||| || ||| |     
T  3530268 gcacatgttaaagcaattaagaataataattttttattgaaaacaacaattatttattaaaaaattatatatttgatataaaatgcacaaatttcaataa 3530169  T
Q  238 aaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    ||| |||||||| ||||  | |||| ||||  |||||| ||||||||    
T  3530168 aaacttactattctaaacgtcttaatatgtgtaaatttgcacatgat 3530122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 39869143 - 39869248
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||||||||||||||| |||||||| ||||||| | ||||||||||   |||| |||||||| ||||| ||||||| ||    
T  39869143 attgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatgcacaagtttca 39869241  T
Q  234 agacaaa 240  Q
    || ||||    
T  39869242 agtcaaa 39869248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 12650857 - 12650973
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||||||||||||||| ||||||||| | |||| ||||||||||||   | || ||||| |||||||    ||||| ||||||||| |||| |||    
T  12650857 caactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagttatat-tttaacataaaatactgaagtttcaagacaaacttaccatt 12650955  T
Q  250 ttaaattttttaacatgt 267  Q
    |||||||| |||||||||    
T  12650956 ttaaatttcttaacatgt 12650973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 26037192 - 26037269
Alignment:
Q  213 atataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||| ||||| ||||||||||| |||||||| |||||||||| || ||||||| | ||||||| |||||||| |||||    
T  26037192 atattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 26050527 - 26050462
Alignment:
Q  226 aagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||| ||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  26050527 aagttacaagacaaatttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 26059886 - 26059821
Alignment:
Q  226 aagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||| ||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  26059886 aagttacaagacaaatttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 3562035 - 3561876
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   ||||||||  |||||||||| |||||||| ||| ||| ||| |||||||  | |||| ||||||||||||   |||||||  |    
T  3562035 attgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaag-ctacatatttaatataaaaaacacaagtttta 3561937  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||  ||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  3561936 agttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 8420916 - 8420832
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||||||||||   |||||||  |||| ||| |||| |||||||||||||||||||||||||||||   |||||| ||||||||    
T  8420916 tttaatataaaagacacaagttataagataaacttaccattttaaattttttaacatgtacaaatttgttcatgatagaaaaacc 8420832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 22334081 - 22334021
Alignment:
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| |||| |||||| |||||| || ||||||||||||||||| ||||||||||||||||    
T  22334081 caagtcaaagttactactttaaacttcttaacatgtacaaatttgcacatgattgaaaaac 22334021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 24250608 - 24250676
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||| |||| |||||| |||||| || ||| ||||| |||||||||||||||| |||||||    
T  24250608 acaagttccaagtcaaagttactactttaaacttcttatcatgttcaaatttccacatgatagaaaaac 24250676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 26300666 - 26300749
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||| |||||  ||||||| |||  |||| ||||||||||||| |||||||||||| |||||||  ||||||| |||||||    
T  26300666 tttaatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatgatggaaaaac 26300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 29692699 - 29692540
Alignment:
Q  134 cattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    ||||||||||| |||||||||||| |||| ||| ||||  ||| ||||||||||| ||||||| ||||     ||  || |||| || ||  ||||||      
T  29692699 cattgcacatgttaaaacaactaataatattaattttttcttggaaaacaacaattatttattcaaaagttttatccttgatattaattgtgcaagtttt 29692600  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    || || ||||| |||||||||| || ||||||||||||||||| |||||||| |||||||    
T  29692599 aataccaaatttctattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 29692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 2341877 - 2341927
Alignment:
Q  242 ttactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||||||||||||||||| |||||||  ||||||| |||||||    
T  2341877 ttactattttaaattttttaacatgtgcaaatttatacatgatagaaaaac 2341927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 36032626 - 36032541
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||||||| ||||| | ||| ||||| ||||||||  |||||||||||| |||||||||  |||||| ||||| || |||||||||    
T  36032626 tttaatatcaaatgtataagatccaatacaaaatttttattttaaatttcttaacatgtgaaaattttcacataatagaaaaaccc 36032541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 47707999 - 47707911
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacat 265  Q
    ||||||||||| ||||||||||||   | || ||||||| |||||| | ||||| |||  |||||||||||||||||| || |||||||    
T  47707999 aaaacaacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 12624732 - 12624797
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    |||||||||||||  |||||||  |||||||| |||| ||||||||||| ||||||||| |||||||    
T  12624732 tttaatataaaatacacaagttt-aagacaaacttaccattttaaatttcttaacatgtgcaaattt 12624797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 24699156 - 24699240
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaa 219  Q
    |||||||||| ||| || ||||||| ||||||||||| |||| ||||||||||| |||||||| |||   |||| |||||||||||    
T  24699156 attgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 30363152 - 30362993
Alignment:
Q  136 ttgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    ||||||||| |||  | ||||||||||||||||||| ||||||||| |||||| | |||||||||| | |||| |||||||||||||| |||||||||||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    | |||| |||||||||||||||| ||| ||||| ||||||| |||||||| |||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaaccc 30362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 41624850 - 41625011
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||||||    
T  41624850 attgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagttccaa 41624949  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    | |||| |||||| |||||| || ||| ||| | ||||||| |||||||| |||||||||||    
T  41624950 gtcaaagttactactttaaacttcttatcatatgcaaatttgcacatgatagaaaaacccta 41625011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 6754492 - 6754651
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||||||    
T  6754492 attgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagttccaa 6754591  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    | |||| |||||| |||||| || ||| ||||| ||||||| |||||||| |||||||||    
T  6754592 gtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 6754651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 34801986 - 34802147
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||||| |||| |||||||| ||||| ||||||||    
T  34801986 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcacaagttc 34802085  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || ||||||||||| |||||||| || ||||||||| ||||||| |||||||| |||||||||    
T  34802086 ca-gacaaaattaccattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 30171897 - 30172060
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  30171897 acattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 30171996  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| |||| |||| | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  30171997 caagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 30172060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 30187438 - 30187601
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  30187438 acattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 30187537  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| |||| |||| | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  30187538 caagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 30187601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 22167353 - 22167516
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||||||| ||||||| ||||||| |||||    || |||||||| ||||| ||||||||    
T  22167353 acattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgtacaagttc 22167452  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| ||||| || |||||||||| || ||| ||||| ||||||| |||||||| | ||||||||    
T  22167453 caatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaaccct 22167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 47355535 - 47355378
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||| ||||||||| ||  ||||||| ||||||||||||||| | |||| |||||   | ||  |||||||||||||||||||||||||    
T  47355535 attgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggtatatcattaatataaaatgaacaagttccaa 47355436  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
     ||||| ||| |||||||||||| |||||||||  ||||||  || |||| |||||||    
T  47355435 tacaaatttattattttaaatttcttaacatgtgtaaatttatacgtgatagaaaaac 47355378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 23591716 - 23591876
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||| ||||||||| |||||| |||| |||||||| ||| ||| ||||||||||||   | || ||||||| |||||| ||||||||    
T  23591716 acattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaatgtacaagttc 23591815  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||  |||| ||  ||||| |||||| ||||||||| ||||||| |||||||| |||||||    
T  23591816 caatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 36490799 - 36490959
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||| ||| ||||| |||||| |||| |||||||| ||||||| ||||||||||||   | || || |||| |||||| ||||||||||    
T  36490799 attgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagttcca 36490898  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |  |||| ||||||||||||| || ||||||||| ||||||| | |||||| |||||||||    
T  36490899 atgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaaccc 36490959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 6180204 - 6180369
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||  | ||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  6180204 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatatttaatattaaatgtacaagttc 6180303  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    ||| | |||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||||||||    
T  6180304 caatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctaa 6180369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 39150484 - 39150324
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| ||||||||||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   |||| |||||    
T  39150484 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacacaaattcca 39150386  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| |||||||| ||||||||||    
T  39150385 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 39150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 1502877 - 1502718
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||||||||||| |||||  |||||   | || ||||||| ||||||  ||| ||||||    
T  1502877 attgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagttatatatttaatacaaaatgttcaaattccaa 1502778  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  1502777 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 1502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 3168228 - 3168065
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgac-atgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | | | || ||||  | |||||||||||| ||||||| |||||  |  || |||||||| ||||| ||||||||    
T  3168228 acattgcacatgttaaaacaactaatagtgggaattttttttggaaaacaacaattatttattcaaaaaaaattatatttaatattaaatgtacaagttc 3168129  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| || ||| | |||||||||| |||||||| ||| ||||||| |||||||| ||||||||||    
T  3168128 caatactaaaattctattttaaactttttaacgtgtgcaaatttgcacatgatagaaaaaccct 3168065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 38812758 - 38812920
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||| ||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| ||||     || |||||||| ||||| |||||||     
T  38812758 acattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttt 38812857  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| | |||||| ||||||| || || ||||||||| ||||||| |||||||| |||||||||    
T  38812858 caatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 38812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 313770 - 313929
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||| |||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||    
T  313770 attgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttcca 313868  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||  ||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  313869 agttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 313929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 9516628 - 9516758
Alignment:
Q  162 agtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    |||||||||| |||||||| || |||| ||||||||||||   | || |||||||||||||  |||||||  |||| ||| |||| ||||||||||| ||    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttctt 9516727  T
Q  261 aacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||||| ||||||| |||||||| ||||||    
T  9516728 aacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 17919490 - 17919634
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||| ||||||||||| ||||||||| |||||| |||||||||||    |||| ||||||||||||   |||| ||||||| |||| |||||| |    
T  17919490 caactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagtt-acatatttaatataaaaaacacaaattccaagtcaaagttactact 17919588  T
Q  250 ttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||| || |||  |||| ||||||| |||||||| ||||||||||    
T  17919589 ttaaacttcttattatgtgcaaatttgcacatgatagaaaaaccct 17919634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 23576571 - 23576411
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||  || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  |||||| |||    
T  23576571 attgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaa 23576472  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  23576471 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 23576411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 39627712 - 39627612
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||||||| |||||||||||||||| ||||||| | ||||| ||||   |||| |||||||||||||| ||||||| ||| ||||| |||||||||    
T  39627712 aactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattt 39627613  T
Q  251 t 251  Q
    |    
T  39627612 t 39627612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 6570113 - 6569983
Alignment:
Q  164 taacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaa 262  Q
    |||||||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||||  ||| |||||| |||||| || ||||    
T  6570113 taacttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaa 6570015  T
Q  263 catgtacaaatttccacatgattgaaaaaccc 294  Q
    ||||| ||||||| |||||||| |||||||||    
T  6570014 catgtgcaaatttgcacatgatagaaaaaccc 6569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 39310849 - 39310782
Alignment:
Q  229 ttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||||| |||||||| |||||||||| |||||||||||| ||||||| |||||||| |||||||||||    
T  39310849 ttccaatacaaaatttctattttaaactttttaacatgtgcaaatttgcacatgatagaaaaacccta 39310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 13241832 - 13241934
Alignment:
Q  189 atttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaa 288  Q
    |||||||||||||  | || |||||||| ||||  ||||||| || |||||| |||| ||||||||||| ||||||||| ||||||| |||||||| |||    
T  13241832 atttattaaaaaattatatatttaatatgaaatacacaagttacacgacaaacttaccattttaaatttcttaacatgtgcaaattttcacatgatagaa 13241931  T
Q  289 aaa 291  Q
    |||    
T  13241932 aaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 21854256 - 21854142
Alignment:
Q  154 ctaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatttta 252  Q
    |||||| |||||| ||||||||||||| ||||| | ||||||| ||||   || | |||||||||||||| |||||||||||| |||| |||| | ||||    
T  21854256 ctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtcaaagttaccacttta 21854157  T
Q  253 aattttttaacatgt 267  Q
    || ||||||||||||    
T  21854156 aactttttaacatgt 21854142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 35438762 - 35438892
Alignment:
Q  162 agtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    ||||||||||||||||||| || ||||  |||||||||||   | || |||||||||||||  |||| ||  |||| ||| |||| ||||||||||| ||    
T  35438762 agtaacttttaattgaaaaacaccaattgtttattaaaaagttatatatttaatataaaatacacaaattataagataaacttaccattttaaatttctt 35438861  T
Q  261 aacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||||| ||||||| |||||||| ||||||    
T  35438862 aacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 30288995 - 30288863
Alignment:
Q  161 tagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttt 259  Q
    |||||| |||| ||||||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||||  |||||||||| |||||| || |    
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttct 30288897  T
Q  260 taacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||||||  |||||| |||||||| ||||||||    
T  30288896 taacatgtgtaaatttgcacatgatagaaaaacc 30288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 44918045 - 44918205
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| |||||| |||| |||||||| ||||||| ||| |||||||  | |||| ||||||||||||   | ||||||||    
T  44918045 attgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttcca 44918143  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |   ||| |||||| ||||||||| |||||||||  |||||| |||||||| ||||||||||    
T  44918144 aattaaagttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccct 44918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 275
Target Start/End: Complemental strand, 7825018 - 7824875
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||| ||||| ||||||| ||||     || |||||||| ||||| |||| ||     
T  7825018 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagttttatatttaatattaaatgtacaaattt 7824919  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    ||  ||||||||  ||||||||| |||||||||||| |||||||    
T  7824918 cattacaaaatttttattttaaactttttaacatgtgcaaattt 7824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 29635851 - 29635748
Alignment:
Q  189 atttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaa 288  Q
    ||||||||||||   | ||||| |||| |||||  ||||||| ||| | ||| ||||||||||||||||||||||||||||||||||  | ||||| |||    
T  29635851 atttattaaaaagttatatgttaaatacaaaatatacaagtttcaatataaagttactattttaaattttttaacatgtacaaatttataaatgatagaa 29635752  T
Q  289 aaac 292  Q
    ||||    
T  29635751 aaac 29635748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 25465262 - 25465340
Alignment:
Q  218 aaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||||| |||||||||||  |||| |||||||||| || || ||||||||| ||||||| |||||||| |||||||||||    
T  25465262 aaatgcacaagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaacccta 25465340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 31101048 - 31100952
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaat 273  Q
    ||||||||| | |||||||||||| | |||| |||||||||||||| |||||||  ||| |||| |||| | ||||||||| |||| |||| |||||    
T  31101048 aaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccactttaaatttcttaatatgtgcaaat 31100952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 1366162 - 1366225
Alignment:
Q  229 ttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||| |||||||||||||||||||||| || ||||||  |||||| |||||||| |||||||    
T  1366162 ttccaatacaaaattactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 1366225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 4607571 - 4607654
Alignment:
Q  210 ttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| ||||||| ||||||| |  ||||||  ||||||| ||||||||    
T  4607571 ttaatattaaatgtacaagttccaatacaaaatttctattataaatttcttaacatatgtaaatttgtacatgatagaaaaacc 4607654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 275
Target Start/End: Complemental strand, 23378651 - 23378519
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa---acgacatgtttaatataaaatgaacaagttccaagacaaaat 242  Q
    |||||||||||||| || |||||||| |||||||| |||||| |||| |||||||   ||   || |||||||||||||| |||| |  |||  |||| |    
T  23378651 taaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatt 23378552  T
Q  243 tactattttaaattttttaacatgtacaaattt 275  Q
    ||||||||| || || ||||||||| |||||||    
T  23378551 tactattttgaaattcttaacatgttcaaattt 23378519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 33673833 - 33673735
Alignment:
Q  194 ttaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||| ||||||||||||||||||| |||||||| |||| ||| | | ||||||||| || ||| | |||  ||||||  ||||||| |||||||    
T  33673833 ttaaaaaactacatgtttaatataaaatgcacaagttctaagaaaaagtaattattttaaacttcttagcgtgtgtaaatttgaacatgatagaaaaac 33673735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 43317510 - 43317576
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaa 201  Q
    |||| ||||| |||| ||||||||| |||||||| ||  |||||||||||||| |||||||||||||    
T  43317510 attgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcatttattaaaaaa 43317576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 51467548 - 51467606
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgt 267  Q
    |||||||| ||||| ||||||||||| ||||| || ||||||||||||| |||||||||    
T  51467548 tttaatattaaatgtacaagttccaatacaaacttcctattttaaatttcttaacatgt 51467606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 51920485 - 51920431
Alignment:
Q  238 aaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||| ||||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  51920485 aaaatttctattttaaatttattaacatgtgcaaatttgcacatgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 28016275 - 28016347
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacat 281  Q
    |||||||| ||| | ||||||||||| ||||||||  ||||||||| || ||||||||| ||||||| |||||    
T  28016275 tttaatattaaaagtacaagttccaatacaaaatttatattttaaaattcttaacatgtgcaaatttgcacat 28016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 34050398 - 34050318
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattt 257  Q
    ||||||||||| |||||| ||||||  | || || ||||||||||| | ||||| ||| ||||||||| ||||||||||||    
T  34050398 aaaacaacaattatttatcaaaaaattatatattaaatataaaatgtaaaagtttcaatacaaaattattattttaaattt 34050318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 49798937 - 49798833
Alignment:
Q  180 acaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccac 279  Q
    |||||||| ||||| ||||||   | || ||||||||||| || | ||||||| |  ||||| || ||||||||||||||||| ||||||||||||  ||    
T  49798937 acaacaattatttagtaaaaatttatatatttaatataaattgtaaaagttcccatgcaaaactattattttaaattttttaatatgtacaaatttgtac 49798838  T
Q  280 atgat 284  Q
    |||||    
T  49798837 atgat 49798833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 281072 - 281139
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||||||  |||||||| |||  ||||||||||||||||||| | |||||||| ||||||| ||||||    
T  281072 acaagttgtaagacaaacttatcattttaaattttttaacatatgcaaatttcaacatgatagaaaaa 281139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 2222380 - 2222236
Alignment:
Q  147 aaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatat-aaaatgaacaagttccaagacaaaattac 245  Q
    ||||||||||||| |||||||||||| |  ||||||| ||| |||||||||||| | |  | |||||||| | |||  |||||||  |||| ||| |||     
T  2222380 aaaacaactaaaagtagtaacttttattgaaaaacaataattatttattaaaaagctaactatttaatatcataatacacaagttttaagataaagttat 2222281  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||  |||||||| |||||||||  |||||| |||||||| |||||||    
T  2222280 ta--ttaaatttcttaacatgtgtaaattttcacatgatagaaaaac 2222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 5057065 - 5057180
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    ||||||| | ||||||||||||||   | || |||||||||||||| ||||||| |||| |||| |||| | |||||| |||| ||||| | |||||||     
T  5057065 aaaacaatattaatttattaaaaagatatatatttaatataaaatgtacaagtttcaagtcaaagttaccactttaaacttttgaacatttgcaaatttg 5057164  T
Q  277 cacatgattgaaaaac 292  Q
    || || || |||||||    
T  5057165 catataatagaaaaac 5057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 43909288 - 43909368
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||||||||||||  |||||||  |||||||| |||| |||| ||||||||||  |||| ||||||| |||||||| ||||||    
T  43909288 tttaatataaaatacacaagttataagacaaacttaccatttaaaatttttta--atgtgcaaatttgcacatgatagaaaaa 43909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 3611883 - 3611929
Alignment:
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||| |||||||||||||||||||| || ||||| |||||||    
T  3611883 tattttaaactttttaacatgtacaaattttcatatgatagaaaaac 3611929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 39930941 - 39930812
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| ||||||||| || ||| ||||||| |||||| |||| | ||||||||||   ||||||| ||||  ||| |||||| ||    
T  39930941 aactaaaagtagtaatttttcattgaaaacaaataattatttatt-aaaaactacatatataatataaaaaatacaagtttcaagttaaagttactactt 39930843  T
Q  251 taaattttttaacatgtacaaatttccacat 281  Q
    |||| || ||| ||||| ||||||| |||||    
T  39930842 taaacttcttatcatgtgcaaatttgcacat 39930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 48085944 - 48085878
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    ||||| |||||||  | |||||| ||||||||||||  ||||||||||| ||||||||| |||||||    
T  48085944 tttaacataaaatacagaagttctaagacaaaattaacattttaaatttcttaacatgtgcaaattt 48085878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 3096333 - 3096390
Alignment:
Q  238 aaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||||| || ||||||||||||| ||||| ||||||| ||||| || ||||||||||    
T  3096333 aaaattattactttaaattttttatcatgtgcaaatttgcacataatagaaaaaccct 3096390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 10896448 - 10896532
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||||||||||   |||||||| |||  ||| |||||| |||||| || ||||||||| ||| ||| |||||||| ||||||||    
T  10896448 tttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaacatgtgcaattttacacatgatagaaaaacc 10896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 20357365 - 20357449
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||||| ||||||  |||||||| || ||||| ||||||| |||||| |||||||||||  ||||||  ||||||| ||| ||||    
T  20357365 tttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaacaacc 20357449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 20562590 - 20562506
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||||| ||||||  |||||||| || ||||| ||||||| |||||| |||||||||||  ||||||  ||||||| ||| ||||    
T  20562590 tttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaacaacc 20562506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 273
Target Start/End: Complemental strand, 52833602 - 52833491
Alignment:
Q  162 agtaacttttaattgaaaacaa-caataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    ||||| |||| ||||||||||| |||| |||||||||||  | |||| |||| |||||||   |||| || |||| |||||||||||||||||| || ||    
T  52833602 agtaatttttcattgaaaacaaacaattatttattaaaag-ctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctt 52833504  T
Q  261 aacatgtacaaat 273  Q
    | ||||| |||||    
T  52833503 atcatgtgcaaat 52833491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 8103737 - 8103576
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||||||    
T  8103737 attgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagttccaa 8103638  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    | |||| |||||| |||||| || ||| ||||| ||||||| |||||||| |||||||||||    
T  8103637 gtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccta 8103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 31567632 - 31567493
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    ||||||||| |||||||||| |||||||| ||| ||| ||| |||||||||| |||| ||||||||||||||||||| || |||||||||||||| ||||    
T  31567632 aactaaaaagagtaactttttattgaaaaacaataattattcattaaaaaactacatatttaatataaaatgaacaaatttcaagacaaaattaccattt 31567533  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    ||||||||||||||||| ||||||| || ||||| |||||    
T  31567532 taaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 152 - 296
Target Start/End: Original strand, 6863594 - 6863738
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatttt 251  Q
    |||||||| ||| || |||| ||||||| ||||||| ||||| ||||||   | || ||||||| ||||||  |||||||||| | ||| ||||||||||    
T  6863594 aactaaaagtagcaagtttttattgaaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaagttactatttt 6863693  T
Q  252 aaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||    
T  6863694 aaattttttaacatgtgcaaatttgcacatgatagaaaaacccta 6863738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 3398238 - 3398401
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||| | ||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  3398238 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatgtacaagttc 3398337  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  3398338 caatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 3398401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 11636752 - 11636914
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||||| |||||| | ||||||||||   |||| ||||||||||| || ||||||| ||    
T  11636752 attgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaa-tgcacaagtttca 11636850  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    || |||| |||||| |||||| || ||| ||||| ||||||| |||||||| ||||||||||||    
T  11636851 agtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctaa 11636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 15241096 - 15240950
Alignment:
Q  147 aaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    |||| |||||||||||||| | ||| |||||||| ||||||| |||||||||||||  | || |||||||||| ||| |||| || ||| ||||| |||     
T  15241096 aaaaaaactaaaaatagtatcatttcattgaaaaacaacaattatttattaaaaaattatatatttaatataacatgcacaaatttcaatacaaatttaa 15240997  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||| || |||||||||||||||||||| |||||||| |||||||    
T  15240996 tattttgaactttttaacatgtacaaatttgcacatgatagaaaaac 15240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 30839802 - 30839962
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  30839802 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 30839901  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  30839902 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 30839962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 36597600 - 36597760
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  36597600 attgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 36597699  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  36597700 tgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 36597760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 18841865 - 18841699
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| ||||     || |||||||| ||||| |||| ||     
T  18841865 acattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaaattt 18841766  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaa 298  Q
    ||| |||||||| |||||||||| |||||||||| | ||||||| |||| |||  ||||||| ||||    
T  18841765 caatacaaaatttctattttaaactttttaacatatgcaaatttgcacacgataaaaaaaccataaa 18841699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 2795544 - 2795703
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||    |||| ||||||| ||||   ||||||||||    
T  2795544 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagtt-acatatttaatacaaaaaacacaagttcca 2795642  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  2795643 agtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 2795703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 4047450 - 4047593
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||||||||||| ||||||||| ||||||  || |||||||  | |||| ||||||||||||   ||||||||||||  ||| |||||| ||    
T  4047450 aactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaag-ctacatatttaatataaaaaacacaagttccaagttaaagttactactt 4047548  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| || ||||||||| ||||||| |||||||| ||||||||||    
T  4047549 taaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 4047593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 292
Target Start/End: Original strand, 11375980 - 11376138
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaac-aagttcc 232  Q
    |||||||||| |||| ||||||||| ||||||||||| |||||||| ||| ||| ||||||| |||| | |||| ||||||||||||   || || || |    
T  11375980 attgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttatt-aaaagctacatatttaatataaaaaacacaaaatttc 11376078  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| |||| |||||| |||||| |||||| |||||| |||||| |||||||| |||||||    
T  11376079 aagtcaaagttactactttaaactttttatcatgtataaatttacacatgatagaaaaac 11376138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 32020067 - 32019984
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||| |||  ||||||||||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  32020067 tttaatatagaatacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 35469649 - 35469732
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||||||||| ||| |||||||| | ||  |||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  35469649 tttaatataaaataaactagttccaataaaagcttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaac 35469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 31366038 - 31365950
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| ||||||||||||   |||||||||||| |||| |||||| |||||| || ||||||||||||||||| |||||||| |||||||    
T  31366038 acatatttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 31365950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 41350292 - 41350372
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||| |||||||||||| | |||||||||||| ||||||||||| |||||| || ||||||||| ||||||| ||||||||    
T  41350292 acatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaacatgtgcaaatttgcacatgat 41350372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 23995499 - 23995416
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||||||| |||||| ||||||| ||| | ||||||||||||||||| || ||||||||||||||||| ||||| || |||||||    
T  23995499 tttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 267
Target Start/End: Complemental strand, 24329774 - 24329660
Alignment:
Q  154 ctaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatttta 252  Q
    |||||| |||||| ||||||||||||| ||||| | ||||||| ||||   || | |||||||||||||| |||||||||||| |||| |||| | ||||    
T  24329774 ctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtcaaagttaccacttta 24329675  T
Q  253 aattttttaacatgt 267  Q
    || ||||||||||||    
T  24329674 aactttttaacatgt 24329660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 16174762 - 16174623
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||||||||||| |||||||| ||||||| | ||||||||||   |||| |||||||| ||||| ||||||| |||  |||| |||||| ||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatat-aaatgcacaagtttcaattcaaagttactactt 16174664  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||||| |||  |||| ||||||| || ||||| ||||||    
T  16174663 taaatttcttatgatgtgcaaatttgcaaatgatagaaaaa 16174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 35151314 - 35151398
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||||| ||||||| ||||||| |||   ||| ||||||||||||| |||||||||| | ||||||| |||||||||||||||||    
T  35151314 tttaatttaaaatgcacaagttacaatgtaaatttactattttaaactttttaacatatgcaaatttgcacatgattgaaaaacc 35151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 11250114 - 11249960
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||| ||||||||| ||| || |||||||   |||||||||| ||||| ||| |||  | |||||||||| |||||| ||| ||| |||    
T  11250114 attgcacatgttaaagcaactaaaagtagcaagttttaatgataaacaacaattatttagtaataaattatatgtttaatacaaaatgtacatgtttcaa 11250015  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
      |||| |||||||||| ||| || ||| ||||||||||||  ||||||| |||||    
T  11250014 tgcaaagttactatttt-aatcttctaatatgtacaaatttgtacatgatagaaaa 11249960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 9184228 - 9184360
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| || ||| ||| |||||||| | |||| ||||||||||||   ||||||||||    
T  9184228 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaa-ctacatatttaatataaaaaacacaagttcca 9184326  T
Q  234 agacaaaattactattttaaattttttaacatgt 267  Q
    ||  ||| |||||| |||||| || |||||||||    
T  9184327 agttaaagttactactttaaacttcttaacatgt 9184360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 28629899 - 28629964
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaa 199  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||| ||||||| |||||||||||    
T  28629899 attgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaa 28629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 30574181 - 30574245
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaat 273  Q
    |||||||||||||| ||||||||| | ||||  ||||||||||||| |||||||||||| |||||    
T  30574181 tttaatataaaatgcacaagttccgatacaatcttactattttaaactttttaacatgtgcaaat 30574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 275
Target Start/End: Original strand, 33072697 - 33072840
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaactttta--attgaaa-acaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||| |||| ||||||||| |||||  ||||   ||||||| ||| |||| ||||||| |||| | | || ||||| |||||||  | ||||||    
T  33072697 attgcacatgttaaatcaactaaaagtagtacttttttttattgaaagacatcaattatttattgaaaagctatatatttaacataaaatacagaagttc 33072796  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
     |||||||||| |  ||||||||||||||||||||| |||||||    
T  33072797 taagacaaaatcaacattttaaattttttaacatgtgcaaattt 33072840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 30328484 - 30328328
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||| | |||||||| |||| | |||| ||| ||||| |||||| ||| |||||||  | |||| ||||||||||||   ||||||||||    
T  30328484 attgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaagttcca 30328386  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||  ||| |||||| |||||| || ||||||||| ||||||   ||||||| |||||||||    
T  30328385 agttaaagttactactttaaacttcttaacatgtgcaaatt---acatgatggaaaaaccc 30328328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 39990178 - 39990047
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||||||| |||| || |||||||| ||||||| || || ||||||| |  || ||||||| |||||| ||||||| ||||||||| ||| |||||    
T  39990178 aactaaaaatagcaactatttattgaaaaacaacaattatctaataaaaaaagttatatttaatagaaaatgcacaagtttcaagacaaacttattattt 39990079  T
Q  251 taaattttttaacatgtacaaatttccacatgat 284  Q
      ||  ||||||||||| || |||| ||||||||    
T  39990078 --aaacttttaacatgtgcacatttacacatgat 39990047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 289
Target Start/End: Original strand, 40512972 - 40513126
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   ||||| || |||||| |||| ||||||| ||||||| |||||  |||||   | || ||| ||| |||||   ||| ||||||    
T  40512972 attgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagttatatatttgatacaaaatattcaaattccaa 40513071  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaa 289  Q
      |||| |||||||||||||||||||||||||| |||||||  ||||||| ||||    
T  40513072 tgcaaagttactattttaaattttttaacatgtgcaaatttgtacatgatagaaa 40513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 34578049 - 34578181
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| || ||| |||| |||||||| |||||||  || |||||||  | |||| ||||||||||||   |||||||  |||  ||| |||||||||    
T  34578049 aactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaag-ctacatatttaatataaaaaatacaagttttaagttaaagttactattt 34578147  T
Q  251 taaattttttaacatgtacaaatttccacatgat 284  Q
    |||| |||||||||||| ||||||| ||||||||    
T  34578148 taaactttttaacatgtgcaaatttgcacatgat 34578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 3738035 - 3737968
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaa 200  Q
    |||||||||||| |||||||||||| | |||||||||||    |||||||||||| ||||||| ||||    
T  3738035 acattgcacatgttaaaacaactaatagtagtaacttttttcggaaaacaacaattatttattcaaaa 3737968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 15190913 - 15191043
Alignment:
Q  155 taaaaatagtaacttttaattgaaaacaa-caataatttattaaaaaacgacatgtttaatataaaatga-acaagttccaagacaaaattactatttta 252  Q
    ||||| |||||| |||| ||||||||||| |||| ||| |||||||    |||| ||||||||||||  | ||||||| |||| ||||||||||| ||||    
T  15190913 taaaagtagtaatttttcattgaaaacaaacaattattgattaaaagtt-acatatttaatataaaaaaacacaagtttcaagtcaaaattactacttta 15191011  T
Q  253 aattttttaacatgtacaaatttccacatgat 284  Q
    || || ||||||||| |||||||  |||||||    
T  15191012 aacttcttaacatgtgcaaatttatacatgat 15191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 16161039 - 16161122
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||||  |||| |  ||| ||||| |||||||||||||||| || ||| || ||||||| |||| |||||||||||    
T  16161039 tttaatataaaatacacaaatcgcaaaacaaacttactattttaaatttcttcacacgtgcaaatttacacacgattgaaaaac 16161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 7162936 - 7163022
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||| || |||| |  |||| ||||  ||||||| || |||||||    
T  7162936 tttaatataaaatgaacaagtttcaattcaaacttactattttaaaattcttaaaaaatacatatttgtacatgatagacaaaccct 7163022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 30893752 - 30893805
Alignment:
Q  237 caaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    |||| ||||||||||||| || ||||||||| ||||||| |||||||| |||||    
T  30893752 caaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 32663830 - 32663765
Alignment:
Q  137 tgcacatgataaaacaactaaaaatagt-aacttttaattgaaaacaacaataatttattaaaaaa 201  Q
    |||||| | |||||||| |||||||| | ||||||| ||||||||||||||| || ||||||||||    
T  32663830 tgcacacgttaaaacaaataaaaataattaactttttattgaaaacaacaatcatctattaaaaaa 32663765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 12642081 - 12641993
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| ||||||||||||   |||||||||||  |||| ||| || |||||| || ||||||||| ||||||| ||||| || |||||||    
T  12642081 acatatttaatataaaaaacacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 19743283 - 19743247
Alignment:
Q  256 tttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||||||||||| |||||||| |||||||    
T  19743283 tttttaacatgtacaaatttgcacatgatagaaaaac 19743247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 294
Target Start/End: Complemental strand, 31169920 - 31169761
Alignment:
Q  136 ttgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    ||||||||| |||  | |||||||||||||| ||||  |||||||| || ||| | |||||||||| | |||| |||||||||||||| |||||||||||    
T  31169920 ttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 31169821  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    | |||| |||||| ||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  31169820 gtcaaagttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaaccc 31169761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 284
Target Start/End: Original strand, 17141306 - 17141445
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaatta 244  Q
    |||||||| ||||| |||| |||||| ||| |||| |||||||||||||||||||| | |||| ||||||||||||||| ||||||| ||||||||||||    
T  17141306 taaaacaattaaaagtagttactttttattaaaaaacaacaataatttattaaaaagctacatatttaatataaaatgagcaagttctaagacaaaatta 17141405  T
Q  245 ctattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||| |||||  | ||||||| | ||||||| ||||||||    
T  17141406 ctatcttaaacatcttaacatatgcaaatttgcacatgat 17141445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 17596388 - 17596521
Alignment:
Q  161 tagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    ||||||||||| ||||||| ||||||| | |||||||||| | ||||  ||||||||||||| |||||||||||  |||| |||||| |||||| || ||    
T  17596388 tagtaactttttattgaaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaacttctt 17596487  T
Q  261 aacatgtacaaatttccacatgattgaaaaaccc 294  Q
    | ||||||||||||| |||||||| |||||||||    
T  17596488 atcatgtacaaatttgcacatgatagaaaaaccc 17596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 6016874 - 6017038
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| ||||||||||| |||||||| ||||| | |||| |||||||   | || |||||||| ||||| ||||||||    
T  6016874 acattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaatgcacaagttc 6016973  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||| |||| |||| | |||||| |||||||||||| ||||||| |||||||| |||||| ||||    
T  6016974 caagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaatccta 6017038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 34692372 - 34692534
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||| | ||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  34692372 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaatgtacaagttc 34692471  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| |||||||| |||||||||    
T  34692472 caatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 10887047 - 10887207
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||||||||  ||||||||    
T  10887047 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaatacacaagttc 10887146  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||  ||||||||| | |||||| || ||||||||| ||||||| |||||||| |||||||    
T  10887147 caaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 282
Target Start/End: Complemental strand, 1017934 - 1017788
Alignment:
Q  137 tgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaag 235  Q
    |||||||||| ||| |||||||| |||||||||||  |||||||| |||||| ||||||||||||   |||| |||||||||||||| |||| || ||||    
T  1017934 tgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaatgcacaactttcaag 1017835  T
Q  236 acaaaattactattttaaattttttaacatgtacaaatttccacatg 282  Q
     |||| |||||| |||||| || |||||||||  |||||| ||||||    
T  1017834 tcaaagttactactttaaacttcttaacatgtgtaaatttacacatg 1017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 8977624 - 8977467
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||| ||| |||||||||||| ||||||| ||||||| ||||   |||| |||||||||||||| ||||||| ||    
T  8977624 attgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagttaca 8977525  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    | ||||| |||||||||| || || |||||| || ||||||| |||||||| ||||||    
T  8977524 atacaaatttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaa 8977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Complemental strand, 17552744 - 17552584
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| || |||| ||||||| |||||  ||||||  | || ||||||| ||||||  ||||||||||    
T  17552744 attgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttccaa 17552645  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      || |||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  17552644 tgcataattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 17552584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 27819787 - 27819627
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaac--ttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||  |||| |||||||||||| ||||  |||| ||||||||| ||||  |||||||||||||   |||| |||| ||||||||||| |||||     
T  27819787 attgcacatattaaagcaactaaaaatattaacattttttattgaaaaccaacatcaatttattaaaaagttacatatttagtataaaatgaataagttt 27819688  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
     ||||||||| ||| |||||||| || ||||||||| |||||||  ||||||| |||||||    
T  27819687 taagacaaaaatacaattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 296
Target Start/End: Complemental strand, 28943906 - 28943765
Alignment:
Q  155 taaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaa 254  Q
    ||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||  |||| |||||||||||||    
T  28943906 taaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaa 28943807  T
Q  255 ttttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    ||| ||||||||| ||||||| |||||||| |||||||||||    
T  28943806 tttcttaacatgtgcaaatttgcacatgatagaaaaacccta 28943765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 14228263 - 14228124
Alignment:
Q  155 taaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaa 254  Q
    ||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||  |||| |||||||||||||    
T  14228263 taaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaa 14228164  T
Q  255 ttttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| ||||||||| ||||||| |||||||| |||||||||    
T  14228163 tttcttaacatgtgcaaatttgcacatgatagaaaaaccc 14228124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 29863460 - 29863301
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| ||||  |||||||||||||||||||  ||||||||  || ||| ||||||||||||     ||  ||||||||||||| | |||||||     
T  29863460 attgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagttaatataaaatgcaaaagttccg 29863361  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    | ||||  ||||||||||||| || ||||||||| ||||||| |||||||| ||||||||    
T  29863360 acacaattttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 294
Target Start/End: Complemental strand, 18332848 - 18332686
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||| | | || |||||||| ||||| | ||||||    
T  18332848 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaatgcataagttc 18332749  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||| ||||||||  | |||||| || |||||||||  |||||| |||||||| |||||||||    
T  18332748 caagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 18332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 297
Target Start/End: Original strand, 33017745 - 33017907
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||| ||| ||||||| |||||  |||||   | || ||||||| ||||||  |||||||| |    
T  33017745 attgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccta 33017844  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
      |||| |||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||    
T  33017845 tgcaaagttactattttaaattttttaacatgtgcaaatttgcacataatagaaaaaccctaa 33017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 12454160 - 12454249
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaa 298  Q
    ||||||||| |||  ||||||||||| || || |||| |||||||||||||||| |||| ||||||| || ||||| |||||||||||||    
T  12454160 tttaatatagaatacacaagttccaaaaccaatttaccattttaaattttttaaaatgtgcaaatttacatatgatagaaaaaccctaaa 12454249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 30623344 - 30623477
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    ||||| |||||| |||||||||||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| |||||||     
T  30623344 acattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaatgtacaagttt 30623443  T
Q  232 caagacaaaattactattttaaattttttaacat 265  Q
    ||| |||||||| |||||||||| || |||||||    
T  30623444 caatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 23936459 - 23936384
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||||||||||||| ||||||||||| | ||| ||||||| ||||| || ||||||||| ||||||| ||||||||    
T  23936459 tttaatataaaatgtacaagttccaaaagaaagttactatgttaaacttgttaacatgtgcaaatttgcacatgat 23936384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 2830838 - 2830679
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| ||||||| ||| ||| |||| | |||| ||||||||||||   |||| ||| |    
T  2830838 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacacaaattcta 2830740  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |   ||| ||| ||||||||| || ||||||||| |||||||  ||||||| |||||||||    
T  2830739 aattaaagttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaaccc 2830679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 292
Target Start/End: Complemental strand, 24979309 - 24979149
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| |||||||||||||  ||| ||||| || || ||||||| |||||    |  |||||||| |||||  ||||| |    
T  24979309 acattgcacatgttaaaacaactaataatagtaactttttcttgaaaaacgacgattatttattcaaaaagtttaaatttaatattaaatgttcaagtac 24979210  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| | |||| |  |||||||||  | ||||||||| ||||||| |||||||| |||||||    
T  24979209 caacataaaaattttattttaaacatcttaacatgtgcaaatttgcacatgatagaaaaac 24979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 29065508 - 29065424
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||||||| ||||| |  |||||| | |||| |||||||||||||| |||||||||||| ||| ||| |||||||| ||||||||    
T  29065508 tttaatatgaaatgcattagttccgatacaatattactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 29120361 - 29120277
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||||||| ||||| |  |||||| | |||| |||||||||||||| |||||||||||| ||| ||| |||||||| ||||||||    
T  29120361 tttaatatgaaatgcattagttccgatacaatattactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 31069722 - 31069583
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| ||||||||| |||||| ||| ||||||     |||| ||||||||||||   |||||||||||| |||| |||||| ||    
T  31069722 aactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgtt-acatatttaatataaaaaacacaagttccaagtcaaagttactaatt 31069624  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||| || |||||||||  |||||| |||||||| ||||||    
T  31069623 taaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 31503837 - 31503909
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacat 281  Q
    |||||||||||||  ||||||||||| | ||| |||||| ||||||||| ||||||||| ||||||| |||||    
T  31503837 tttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcacat 31503909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 31568157 - 31568288
Alignment:
Q  162 agtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    |||| ||||| |||||||| |||||||  |||||| |||| | |||| |||| |||||||   ||||||| |||  |||| |||||| |||||| |||||    
T  31568157 agtagctttttattgaaaatcaacaatt-tttattcaaaagctacatatttattataaaaaacacaagtttcaaatcaaagttactactttaaacttttt 31568255  T
Q  261 aacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||||| ||||||| |||||||| ||||||||    
T  31568256 aacatgtgcaaatttgcacatgatagaaaaacc 31568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 3261188 - 3261261
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    |||||||| ||  |||| || |||||||||| ||||||||||||  |||||| |||||||| ||||||||||||    
T  3261188 acaagttctaatgcaaagtttctattttaaactttttaacatgtgtaaatttgcacatgatagaaaaaccctaa 3261261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 22974730 - 22974611
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| ||||||| ||| |||||||    |||| ||||||||||||   ||||||||||    
T  22974730 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagtt-acatatttaatataaaaaacacaagttcca 22974632  T
Q  234 agacaaaattactattttaaa 254  Q
    ||  ||| |||||||||||||    
T  22974631 agttaaagttactattttaaa 22974611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 23813671 - 23813790
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| ||||||| ||| |||||||    |||| ||||||||||||   ||||||||||    
T  23813671 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagtt-acatatttaatataaaaaacacaagttcca 23813769  T
Q  234 agacaaaattactattttaaa 254  Q
    ||  ||| |||||||||||||    
T  23813770 agttaaagttactattttaaa 23813790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 3484780 - 3484725
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaaca 264  Q
    ||||||||||||||||||| |||||| | ||| ||||||||||||| || ||||||    
T  3484780 tttaatataaaatgaacaaattccaaaataaacttactattttaaacttcttaaca 3484725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 29074521 - 29074438
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||| ||||| |  |||||| | |||| ||||| |||||||| |||||||||||| ||| ||| |||||||| |||||||    
T  29074521 tttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 29079285 - 29079202
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||| ||||| |  |||||| | |||| ||||| |||||||| |||||||||||| ||| ||| |||||||| |||||||    
T  29079285 tttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 29107094 - 29107011
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||| ||||| |  |||||| | |||| ||||| |||||||| |||||||||||| ||| ||| |||||||| |||||||    
T  29107094 tttaatatgaaatgcattagttccgatacaatattacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 17154718 - 17154799
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    ||||||||| |||  ||||||| ||| |||||  || ||||||||||||||||||||||  |||||| || |||||| ||||    
T  17154718 tttaatatagaatacacaagtttcaaaacaaacctattattttaaattttttaacatgtgtaaatttacaaatgattaaaaa 17154799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 5363050 - 5362931
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||| |||||||  || ||| |||| | |||| ||||||||||||   ||||||||||    
T  5363050 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgatt-aaaagctacatatttaatataaaaaacacaagttcca 5362952  T
Q  234 agacaaaattactattttaaa 254  Q
    ||  ||| |||||| ||||||    
T  5362951 agttaaagttactactttaaa 5362931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 8560 - 8416
Alignment:
Q  146 taaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    ||||||||| |||| || ||| |||| ||||||||||||||| |||||||||||||| |||  |||||||||||||| |||||||| ||  |||| ||||    
T  8560 taaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttac 8461  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaa 290  Q
    || ||||||||| ||||||| | ||||||| |||||||| |||||    
T  8460 tactttaaatttcttaacatatgcaaatttacacatgatagaaaa 8416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 23438192 - 23438339
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||  ||||||||||| |||||||| |||||||||||||||||||  | |||| |||| ||||||||||||||||| ||| ||||| ||||||||    
T  23438192 caactaaatgtagtaactttttattgaaaaacaacaataatttattaaaaggcaacatattta-tataaaatgaacaagtttcaaaacaaagttactatt 23438290  T
Q  250 ttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaaa 298  Q
    ||||| || | ||||||| ||||||| ||||| || |||||||||||||    
T  23438291 ttaaaattctcaacatgtgcaaatttgcacataatagaaaaaccctaaa 23438339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 27019278 - 27019441
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| ||||     || |||||||| ||||| |||||||     
T  27019278 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttt 27019377  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| |||||||| |||||||||| |||||||||| | ||||||| |||||||| ||||||||||    
T  27019378 caatacaaaatttctattttaaactttttaacatatgcaaatttgcacatgatagaaaaaccct 27019441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 17409842 - 17410004
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||||||| ||||||| ||||||| |||||    || |||||||| ||||| ||||||||    
T  17409842 acattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgtacaagttc 17409941  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| ||||| || |||||||||| || ||| ||||| ||||||| |||||||| |||||||||    
T  17409942 caatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 17410004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 294
Target Start/End: Complemental strand, 19451060 - 19450898
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| ||||||||    
T  19451060 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttc 19450961  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| ||||| || |||||||||    
T  19450960 caatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaaccc 19450898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 292
Target Start/End: Complemental strand, 47327052 - 47326892
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||||||| ||| | | |||||||||||||| |||| |||||||| ||||| | ||||||    
T  47327052 acattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttc 47326953  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| |||| |||| | |||||| || ||||||||| ||||||| |||||||| |||||||    
T  47326952 caagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 292
Target Start/End: Complemental strand, 47341848 - 47341688
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||||||| ||| | | |||||||||||||| |||| |||||||| ||||| | ||||||    
T  47341848 acattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttc 47341749  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| |||| |||| | |||||| || ||||||||| ||||||| |||||||| |||||||    
T  47341748 caagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 16667544 - 16667385
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||||||| ||||| | |||||||||||| | |||| |||||||||||||  |||||||     
T  16667544 acattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaatacacaagttt 16667445  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    ||||  |||||||  |||||||| || ||||||||| ||||||| |||||||| ||||||    
T  16667444 caagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 19468212 - 19468375
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt-gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||||||||  || |||||||||||| ||||||| ||||     || |||||||| ||||| |||||||     
T  19468212 acattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttt 19468311  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||| |||||||| |||||||||| || ||||||||| ||||||| ||||| || ||||||||||    
T  19468312 caatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaaccct 19468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 40049579 - 40049739
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| ||||  |||||||| |||||| |||| || |||| ||||||| |||||  ||||||  | || ||||||| ||||||   |||||||||    
T  40049579 attgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaattatatatttaataaaaaatgttaaagttccaa 40049678  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      ||||||||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||    
T  40049679 tgcaaaattactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaaccct 40049739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 49181092 - 49181252
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||| ||| |||||||||||| ||||||| ||||||| ||||   |||| |||||||||||||| ||||||| ||    
T  49181092 attgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagttaca 49181191  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    | ||||| |||||||||| || || |||||| || ||||||| |||||||| |||||||||    
T  49181192 atacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaaccc 49181252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 52391319 - 52391475
Alignment:
Q  136 ttgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    ||||||||| ||||| |||||| | |||||||||||  ||||||| ||||||| ||||||| ||||     || |||||||| ||||| |||||||||||    
T  52391319 ttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaa 52391418  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
     |||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||    
T  52391419 tacaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 294
Target Start/End: Original strand, 51691360 - 51691521
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||| ||||||||| |||||| | || ||||||||| || ||| |||||||||||| | | || ||||||  |||||  ||||||||    
T  51691360 acattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatatacaagttc 51691458  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||  |||| ||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||    
T  51691459 caatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaaccc 51691521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 23545494 - 23545654
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||||||||||| | |||||| ||||  ||| ||||||||||| ||||||| ||||     || |||||||| ||||| |||| |||    
T  23545494 acattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaatttc 23545593  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    ||| ||||||||  ||||||||| || ||||||||| ||||||| |||||||| |||||||    
T  23545594 caatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaac 23545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 296
Target Start/End: Original strand, 27362409 - 27362573
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||| ||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||| ||||| | |||| |||||||| ||||| |||| |||    
T  27362409 acattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaattc 27362508  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacccta 296  Q
    |||| ||||||||| | |||||| || ||||||||| ||||||| |||||||| |||||||||||    
T  27362509 caagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccta 27362573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 39876851 - 39877011
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| |||||| |||| ||||||| ||||||| |||||  |||||   | || ||| ||| ||||||  ||||||||||    
T  39876851 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttcaagttccaa 39876950  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  39876951 tgcaaagttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaaccct 39877011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 50352323 - 50352483
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||||||||||    
T  50352323 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaagttccaa 50352422  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
      ||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||||||    
T  50352423 tgcaaaattactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaaccct 50352483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 8736970 - 8736808
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||| |||||| |||| |||| ||||||| | | ||||||||||||   |||| |||||||| ||||| || |||||    
T  8736970 acattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcac-agttc 8736872  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| |||| |||| | ||||||||| ||||||||| ||||||| |||| ||| ||||||||||    
T  8736871 caagtcaaagttaccactttaaatttcttaacatgtgcaaatttacacacgatagaaaaaccct 8736808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 289
Target Start/End: Original strand, 24684854 - 24685012
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaatt--gaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagtt 230  Q
    ||||| |||||| |||||||||||| | |||||||||||  ||  |||||||||||| ||||||| ||||     || |||||||| ||||| |||||||    
T  24684854 acattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagtt 24684953  T
Q  231 ccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaa 289  Q
    ||||  ||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||    
T  24684954 ccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 36971337 - 36971452
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||||||||| |||||||| |||  | |||| |||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||   ||||||     
T  36971337 aaaacaacaaaaatttatttaaaggctacatatttaatataaaatgaacaagtttcaagataaagttactattttaaatttcttaacatgcgtaaatttg 36971436  T
Q  277 cacatgattgaaaaac 292  Q
    ||| |||| |||||||    
T  36971437 cacttgatagaaaaac 36971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 54495797 - 54495634
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| ||||  ||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  54495797 acattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 54495698  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||  ||| |||| | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  54495697 caagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 54495634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 18882350 - 18882264
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  18882350 tttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 18882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 293
Target Start/End: Original strand, 25843316 - 25843473
Alignment:
Q  140 acatgataaaacaactaaaaatagtaacttttaattg-aaaacaacaataatttattaaaaaac-gacatgtttaatataaaatgaac--aagttccaag 235  Q
    ||||| |||| ||||||||| ||||||||||| |||| ||||||||||  |||| ||||||| |  | || |||||||||||||| ||  |||||| |||    
T  25843316 acatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagcttatatatttaatataaaatgcacaaaagttctaag 25843415  T
Q  236 acaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    ||||| |||||| |||||| |||||||||| ||||||||| ||| |||| ||||||||    
T  25843416 acaaagttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaacc 25843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 41415698 - 41415554
Alignment:
Q  151 caactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactatt 249  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||  | |||| ||||||||||||   |||| || |||| |||| |||||| |    
T  41415698 caactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaag-ctacatatttaatataaaaaacacaaatttcaagtcaaagttactact 41415600  T
Q  250 ttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||| || ||| ||||| ||||||| ||||||||  |||||||||    
T  41415599 ttaaacttattatcatgtgcaaatttgcacatgatataaaaaccct 41415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 2096891 - 2097037
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||| | |||| ||||||||| |   ||||||| |||||||| ||||||| ||||||||||||   | || |||||||||||||| ||||||||||    
T  2096891 attgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaatgcacaagttcca 2096990  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccaca 280  Q
    | ||||| |||| ||||| || || ||||||||| ||||||| ||||    
T  2096991 atacaaacttaccattttgaacttcttaacatgtgcaaattttcaca 2097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 44916726 - 44916640
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||| |||||  ||||||| || |||||||| |||||||||||||||||| |||| ||||||| |||||||| ||||||||||    
T  44916726 tttaatattaaatgtgcaagttctaatacaaaatttctattttaaattttttaatatgtgcaaatttgcacatgatagaaaaaccct 44916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 7349709 - 7349869
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||  ||||||||| || |||||||| ||||||||| |||||| |||| ||||||    |||| ||||||||||||   |||||||  |    
T  7349709 attgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagtt-acatatttaatataaaaaacacaagtttta 7349807  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    || |||| |||||| |||||| || ||| ||||||||||||| |||||||| ||||||||||    
T  7349808 agtcaaagttactactttaaacttcttatcatgtacaaatttacacatgatagaaaaaccct 7349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 9759299 - 9759140
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaa 234  Q
    |||||||||| |||   |||||||| ||| || |||| ||||||| ||||||| |||||  |||||   | || ||||||| ||||||  ||| ||||||    
T  9759299 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaatacaaaatgttcaacttccaa 9759200  T
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
      |||| |||||||||||||||| ||||||||| |||||||  ||||||| |||||||||    
T  9759199 tgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaaccc 9759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 284
Target Start/End: Complemental strand, 19838849 - 19838699
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    |||||||||||| |||||||||||| | || ||||||||  || ||| ||||||| ||||||| ||||     || |||||||| ||||| |||||||||    
T  19838849 acattgcacatgttaaaacaactaatagtaataactttttttttaaa-caacaattatttattcaaaagttttatatttaatattaaatgtacaagttcc 19838751  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    || |||||||| ||||||||||    ||||||||| ||||||| ||||||||    
T  19838750 aatacaaaatttctattttaaacgggttaacatgtgcaaattttcacatgat 19838699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 34941315 - 34941458
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||  ||||||| |||||||| ||||||  ||||||||||||   | || || |||| |||||| |||||||||||  ||||||||||||||    
T  34941315 aactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaaaattactattt 34941414  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||| || ||| ||||| ||||||  |||||||| |||||||||    
T  34941415 taaacttcttatcatgtgcaaattcgcacatgatagaaaaaccc 34941458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 10389408 - 10389279
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| || |||||||||||||||||| |||||| ||| |||||||    |||| ||| ||||||||   |||||||| ||| ||||||||||| ||    
T  10389408 aactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagtt-acatatttcatataaaaaacacaagttctaagtcaaaattactactt 10389310  T
Q  251 taaattttttaacatgtacaaatttccacat 281  Q
     |||||||||||||||| ||||||| |||||    
T  10389309 gaaattttttaacatgtgcaaatttacacat 10389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 42479971 - 42479889
Alignment:
Q  213 atataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||||||||| ||||||||||||||||| |||  || |||||||| ||||||||| ||||||| |||||||| ||||| ||||    
T  42479971 atataaaatgcacaagttccaagacaaatttatcatattaaatttcttaacatgtgcaaatttgcacatgatagaaaatccct 42479889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 33632348 - 33632201
Alignment:
Q  147 aaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattac 245  Q
    ||||||||||| | |||||||||||  ||||||| ||||||| ||||||| ||||     || |||||||| ||||| ||||||| ||| | ||| || |    
T  33632348 aaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagtttcaatataaattt-c 33632250  T
Q  246 tattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    ||||||||| |||||||||||| ||||||  |||||||| |||||||||    
T  33632249 tattttaaactttttaacatgtgcaaattcgcacatgatagaaaaaccc 33632201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 23553590 - 23553747
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaactttta-attgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    |||||||||| |||   ||||||||||||||| ||||  ||||||||| |||||| ||| |||||||| | |||| ||||||||||||   |||| ||      
T  23553590 attgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaa-ctacatatttaatataaaaaatacaaatttt 23553688  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||  ||| |||||| |||||| |||||||||||| ||||||| |||||||| ||||||    
T  23553689 aagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 293
Target Start/End: Complemental strand, 29190956 - 29190815
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| ||||||||| |||||| ||| ||||||    | ||| |||||||| |||   |||||||||||| |||| |||||| ||    
T  29190956 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttg-catatttaatattaaaaacacaagttccaagtcaaagttactaatt 29190858  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||| || ||||||||| ||||||| |||||||| ||||||||    
T  29190857 taaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 1378077 - 1378178
Alignment:
Q  173 attgaaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaa 272  Q
    |||||||||| |||| |||||||||||    | || |||||||| ||||| ||||||| ||||| ||| |||| ||||||||||| ||||||||| ||||    
T  1378077 attgaaaacatcaattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgtgcaaa 1378176  T
Q  273 tt 274  Q
    ||    
T  1378177 tt 1378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 39216084 - 39216173
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatg 266  Q
    ||||||||||  ||||||| | |||| |||| |||||||||||||| ||||||| | |||||||| || ||||||||| || ||||||||    
T  39216084 aaaacaacaactatttattgacaaactacatatttaatataaaatgcacaagtttcgagacaaaactattattttaaacttcttaacatg 39216173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 37785001 - 37784877
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| ||| ||||||| |||||||| ||| ||| ||||||||||||   |||| ||||| |||||||| |||| || ||| | ||| |||||||||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaatgcacaaattacaatataaatttactattt 37784902  T
Q  251 taaattttttaacatgtacaaattt 275  Q
    | || || ||||||||| |||||||    
T  37784901 tgaacttcttaacatgtccaaattt 37784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 40682539 - 40682609
Alignment:
Q  220 atgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||| |||| || |||||||| |||||||    
T  40682539 atgaacaagttc-aagacaaagttactattttaaatttcttaacatgtgcaaa-ttgcacatgatagaaaaac 40682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 50945559 - 50945519
Alignment:
Q  208 gtttaatataaaatgaacaagttccaagacaaaattactat 248  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  50945559 gtttaatataaaatgaacaagttccaagacaaagttactat 50945519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 55813922 - 55814034
Alignment:
Q  173 attgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaa 271  Q
    |||||||| ||||||| ||||||||||||   | || ||||||| | |||| |||| || ||| ||||||||| ||||||||| |||||||||||| |||    
T  55813922 attgaaaatcaacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgcaa 55814021  T
Q  272 atttccacatgat 284  Q
    |||| || |||||    
T  55814022 atttgcatatgat 55814034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 51070511 - 51070399
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||||| |||| ||||||||||||   | || |||||||||||||  ||||||| ||| ||||| |||| ||||||||||| |||||  || |||||||     
T  51070511 aaaacaccaatcatttattaaaaagttatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaac--gtgcaaatttt 51070414  T
Q  277 cacatgattgaaaaa 291  Q
    |||||||| ||||||    
T  51070413 cacatgatagaaaaa 51070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 39539482 - 39539604
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| ||| |||||  |||||| |||| |||||||| ||||| | |||||||||||| | |||| |||||||| ||||  |||||||     
T  39539482 acattgcacatgctaagacatctaaacttagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatatgaaattcacaagttt 39539581  T
Q  232 caagacaaaattactattttaaa 254  Q
    |||| || | |||| ||||||||    
T  39539582 caagtcatagttaccattttaaa 39539604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 49228764 - 49228834
Alignment:
Q  224 acaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    |||||||||||| |||| |||||| |||||| || |||||| || ||||||| |||||||| |||||||||    
T  49228764 acaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaaccc 49228834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 292
Target Start/End: Original strand, 53961412 - 53961500
Alignment:
Q  204 acatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||| ||||||||||||   |||| || |||| ||||||||||| |||||| || ||||||||| ||||||| |||| ||| |||||||    
T  53961412 acatatttaatataaaaaacacaaatttcaagtcaaaattactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 3085740 - 3085791
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaatttttt 260  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||| |||||    
T  3085740 tttaatattaaatgtacaagttccaatacaaaatttctattttaaacttttt 3085791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 10658500 - 10658425
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    ||||||| ||||||  |||||| |||   ||| |||||||||||||||||||||||||| ||||||  ||||||||    
T  10658500 tttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacatgat 10658425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 10872645 - 10872570
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    ||||||| ||||||  |||||| |||   ||| |||||||||||||||||||||||||| ||||||  ||||||||    
T  10872645 tttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacatgat 10872570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 16069339 - 16069224
Alignment:
Q  161 tagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttt 259  Q
    |||||| |||| |||||||| ||||||| |||||||||||||    || |||||||| ||||| |||| || ||| |||||| | |||||| ||| || |    
T  16069339 tagtaattttttattgaaaaacaacaattatttattaaaaaaatttatatttaatattaaatgtacaaatttcaatacaaaaattctatttaaaacttct 16069240  T
Q  260 taacatgtacaaattt 275  Q
    |||||||| |||||||    
T  16069239 taacatgtgcaaattt 16069224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 32279194 - 32279241
Alignment:
Q  237 caaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    |||| ||||||||||||| |||||||||||| ||||||| ||||||||    
T  32279194 caaatttactattttaaactttttaacatgtgcaaatttacacatgat 32279241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 49332959 - 49333006
Alignment:
Q  235 gacaaaattactattttaaattttttaacatgtacaaatttccacatg 282  Q
    |||||| ||||||||| |||||||||||||||| ||||||| ||||||    
T  49332959 gacaaacttactatttaaaattttttaacatgtgcaaatttgcacatg 49333006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 53376524 - 53376405
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatg-tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    ||||||||||| ||||||||||||   | ||  |||||||||||||| ||| |||  || ||||| ||  ||||||||| || ||||||||| |||||||    
T  53376524 aaaacaacaatcatttattaaaaagttatataatttaatataaaatgcacaggttttaatacaaacttcttattttaaacttcttaacatgtgcaaattt 53376425  T
Q  276 ccacatgattgaaaaaccct 295  Q
     ||||||||  |||||||||    
T  53376424 tcacatgataaaaaaaccct 53376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 13009915 - 13009813
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||| ||| |||||||||||||| || ||| |||| ||||||||| || ||| ||||| |||||| | | || ||||||| |||||  ||||||||    
T  13009915 acattgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagctatatatttaatacaaaatatacaagttc 13009816  T
Q  232 caa 234  Q
    |||    
T  13009815 caa 13009813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 41488797 - 41488735
Alignment:
Q  213 atataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    |||||||||| | |||||  |||||||| |||| ||||||||||| ||||||||| |||||||    
T  41488797 atataaaatgcataagttttaagacaaatttacaattttaaatttcttaacatgtgcaaattt 41488735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 3085801 - 3085853
Alignment:
Q  245 ctattttaaattttttaacatgtacaaatttccacatgattgaaaaaccctaa 297  Q
    |||||||||| || |||| |||| ||||||| |||||||| ||||||||||||    
T  3085801 ctattttaaacttcttaaaatgtgcaaatttgcacatgatagaaaaaccctaa 3085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 38222353 - 38222457
Alignment:
Q  181 caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaa-ttactattttaaattttttaacatgtacaaatttccac 279  Q
    ||||||| |||||||||||||  | || |||||||||||||  |||| ||  || |||||| |||| ||||||| |||||||||||||  |||||| ||     
T  38222353 caacaattatttattaaaaaattatatatttaatataaaatccacaaattttaatacaaaatttacaattttaatttttttaacatgtgtaaatttgcag 38222452  T
Q  280 atgat 284  Q
    |||||    
T  38222453 atgat 38222457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 37274 - 37111
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| ||| | | |||||| |||||| |||| |||||||| ||| | | |||||||||||| | |||| |||||||| ||||| ||||||||    
T  37274 acattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttc 37175  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    |||| |||| |||  | |||||| || ||||||||| ||||||| |||||||| ||||||||||    
T  37174 caagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 37111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 292
Target Start/End: Complemental strand, 94178 - 94018
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttc 231  Q
    |||||||||||| |||| ||||||||| |||||| |||| ||||||||| || ||| |||||||||||||| | || ||||||| |||||| | ||||||    
T  94178 acattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaatgtataagttc 94079  T
Q  232 caagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||   ||| ||| ||||| ||| || ||||||| | ||||||| |||||||| |||||||    
T  94078 caatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgatagaaaaac 94018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 52936 - 52777
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||    |||| ||||||| ||||   ||||||||||    
T  52936 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagtt-acatatttaatacaaaaaacacaagttcca 52838  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  52837 agtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 52777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 145698 - 145857
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcca 233  Q
    |||||||||| |||   |||||||| ||||||||||| ||||||||| |||||| ||| |||||||    |||| ||||||| ||||   ||||||||||    
T  145698 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagtt-acatatttaatacaaaaaacacaagttcca 145796  T
Q  234 agacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccc 294  Q
    || |||| |||||| |||||| || ||||||||| ||||||| |||||||| |||||||||    
T  145797 agtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 1526 - 1451
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgat 284  Q
    ||||||||||||||||||| ||  |||| ||||||||| ||||||| || ||||||||| ||||||| ||||||||    
T  1526 tttaatataaaatgaacaaattttaagataaaattactcttttaaacttcttaacatgtgcaaatttgcacatgat 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 5711 - 5868
Alignment:
Q  135 attgcacatgataaaacaactaaaaatagtaactttta-attgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttcc 232  Q
    |||||||||| |||   ||||||||||||||| ||||  ||||||||| |||||| ||| |||||||| | |||| ||||||||||||   |||| ||      
T  5711 attgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaa-ctacatatttaatataaaaaatacaaatttt 5809  T
Q  233 aagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaa 291  Q
    |||  ||| |||||| |||||| |||||||||||| ||||||| |||||||| ||||||    
T  5810 aagttaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 292
Target Start/End: Complemental strand, 18134 - 17996
Alignment:
Q  155 taaaaatagtaacttttaattgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaa 253  Q
    ||||| |||||||| |||||| |||| ||||||| |||||||| |||   | || |||||||||||||| |||| |||||| |||||  ||||||||| |    
T  18134 taaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaatacaaacatactattttga 18035  T
Q  254 attttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |  |||||||| || ||||||| || ||||| |||||||    
T  18034 acattttaacacgtgcaaatttgcatatgatagaaaaac 17996  T

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Target: scaffold0305; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 17903 - 17788
Alignment:
Q  177 aaaacaacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttc 276  Q
    |||| |||||| ||||||||||||   | || ||||||| |||||| ||||||||||| | ||| |||||||||| || ||  |||||||| |||||||     
T  17903 aaaataacaattatttattaaaaatttatatctttaatacaaaatgtacaagttccaatataaagttactatttttaacttaataacatgtgcaaatttg 17804  T
Q  277 cacatgattgaaaaac 292  Q
    || || || |||||||    
T  17803 caaattatagaaaaac 17788  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 13123 - 13264
Alignment:
Q  152 aactaaaaatagtaacttttaattgaaaac-aacaataatttattaaaaaacgacatgtttaatataaaatgaacaagttccaagacaaaattactattt 250  Q
    |||||||| |||||| |||| ||||||||| ||||||  || |||||||  | |||| ||||||||||||   |||| ||||||   ||| |||||||||    
T  13123 aactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaag-ctacatatttaatataaaaaacacaaattccaaattaaagttactattt 13221  T
Q  251 taaattttttaacatgtacaaatttccacatgattgaaaaacc 293  Q
    |||| || ||||||||| ||||||| |||||||| ||||||||    
T  13222 taaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 13264  T

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Target: scaffold0229 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 24590 - 24527
Alignment:
Q  229 ttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||| |||||||||||||||||||||| || ||||||  |||||| |||||||| |||||||    
T  24590 ttccaatacaaaattactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 24527  T

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Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 275
Target Start/End: Original strand, 22480 - 22625
Alignment:
Q  135 attgcacatgataaaacaactaaaaa--tagtaactttta--attgaaaa-caacaataatttattaaaaaacgacatgtttaatataaaatgaacaagt 229  Q
    |||||||||| |||| ||||||||||  |||||| ||||   |||||||| || |||| |||||||||||| | | || ||||| ||| |||  | ||||    
T  22480 attgcacatgttaaatcaactaaaaaagtagtaattttttttattgaaaaacatcaattatttattaaaaagctatatatttaacatagaatacaaaagt 22579  T
Q  230 tccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    || ||||||||||||  ||||||||||| ||||||||| |||||||    
T  22580 tctaagacaaaattaacattttaaatttcttaacatgtgcaaattt 22625  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 182171 - 182223
Alignment:
Q  243 tactattttaaattttttaacatgtacaaatttccacatgattgaaaaaccct 295  Q
    ||||| |||||| || ||||||||||||||||| |||||||| ||||||||||    
T  182171 tactactttaaacttcttaacatgtacaaatttacacatgatagaaaaaccct 182223  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 45580 - 45497
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacatgattgaaaaac 292  Q
    |||||||| ||||| ||||||||| | |||| |||||||||||||| || || |||| |  |||||| |||||||| |||||||    
T  45580 tttaatatgaaatgcacaagttccgatacaatattactattttaaacttctttacatatgtaaatttgcacatgatagaaaaac 45497  T

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Target: scaffold0631 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 519 - 585
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaattt 275  Q
    ||||| |||||||  | |||||| ||||||||||||  ||||||||||| ||||||||| |||||||    
T  519 tttaacataaaatacagaagttctaagacaaaattaacattttaaatttcttaacatgtgcaaattt 585  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 48541 - 48503
Alignment:
Q  133 acattgcacatgataaaacaactaaaaatagtaactttt 171  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  48541 acattgcacatgataaaacaactaacaatagtaattttt 48503  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 191397 - 191326
Alignment:
Q  209 tttaatataaaatgaacaagttccaagacaaaattactattttaaattttttaacatgtacaaatttccacat 281  Q
    |||||||||||||  |||| |||||||||||| ||   ||||||||||| ||||||||| ||||||| |||||    
T  191397 tttaatataaaatacacaa-ttccaagacaaatttgtcattttaaatttcttaacatgtgcaaatttgcacat 191326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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