View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0700_low_6 (Length: 396)

Name: NF0700_low_6
Description: NF0700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0700_low_6
NF0700_low_6
[»] chr2 (89 HSPs)
chr2 (171-231)||(20347461-20347521)
chr2 (173-231)||(30190922-30190980)
chr2 (171-231)||(11883620-11883680)
chr2 (297-351)||(32673020-32673074)
chr2 (297-350)||(11883746-11883799)
chr2 (174-231)||(11883923-11883980)
chr2 (172-228)||(6171456-6171512)
chr2 (172-228)||(18296693-18296749)
chr2 (172-228)||(24832329-24832385)
chr2 (173-228)||(2639482-2639537)
chr2 (173-228)||(26841586-26841641)
chr2 (302-396)||(40469685-40469778)
chr2 (170-228)||(2638816-2638874)
chr2 (297-351)||(6171334-6171388)
chr2 (297-351)||(20347341-20347395)
chr2 (297-351)||(30191046-30191100)
chr2 (172-228)||(37720202-37720258)
chr2 (171-231)||(40469726-40469786)
chr2 (173-228)||(5378660-5378715)
chr2 (302-396)||(24832336-24832429)
chr2 (302-396)||(30190928-30191021)
chr2 (297-352)||(40221488-40221543)
chr2 (173-228)||(41790912-41790967)
chr2 (174-228)||(17850978-17851032)
chr2 (174-228)||(26842238-26842292)
chr2 (171-228)||(8851582-8851639)
chr2 (175-228)||(18296077-18296130)
chr2 (302-351)||(26737657-26737706)
chr2 (174-231)||(30191222-30191279)
chr2 (297-350)||(40469607-40469660)
chr2 (172-228)||(8851146-8851202)
chr2 (173-228)||(5379959-5380014)
chr2 (171-226)||(6495723-6495778)
chr2 (177-228)||(7591204-7591255)
chr2 (302-396)||(11883628-11883721)
chr2 (171-230)||(32673141-32673199)
chr2 (297-351)||(15920912-15920966)
chr2 (297-355)||(17345854-17345912)
chr2 (174-228)||(26737781-26737835)
chr2 (171-231)||(26737479-26737537)
chr2 (174-231)||(40469427-40469484)
chr2 (171-231)||(43495306-43495366)
chr2 (171-226)||(6325349-6325404)
chr2 (173-228)||(7664247-7664302)
chr2 (302-388)||(11883890-11883975)
chr2 (173-228)||(20347162-20347217)
chr2 (302-396)||(20347420-20347513)
chr2 (177-228)||(26692820-26692871)
chr2 (174-228)||(7664673-7664727)
chr2 (177-231)||(15920781-15920835)
chr2 (174-228)||(16910827-16910881)
chr2 (173-226)||(29230281-29230334)
chr2 (174-226)||(6171156-6171207)
chr2 (181-224)||(6324924-6324967)
chr2 (176-231)||(18055050-18055103)
chr2 (177-231)||(18055169-18055224)
chr2 (177-228)||(18055316-18055367)
chr2 (177-231)||(43495481-43495535)
chr2 (174-228)||(7591850-7591904)
chr2 (177-227)||(15321515-15321565)
chr2 (297-355)||(18055166-18055224)
chr2 (297-355)||(43495481-43495538)
chr2 (171-224)||(5793444-5793497)
chr2 (175-228)||(16911269-16911321)
chr2 (171-228)||(26692393-26692450)
chr2 (179-227)||(26737657-26737706)
chr2 (177-226)||(29343584-29343633)
chr2 (174-231)||(43495602-43495658)
chr2 (175-227)||(6495468-6495519)
chr2 (176-228)||(19141446-19141497)
chr2 (302-393)||(32673102-32673191)
chr2 (174-226)||(40221313-40221364)
chr2 (325-388)||(40469454-40469517)
chr2 (179-226)||(40469607-40469655)
chr2 (177-231)||(17345736-17345788)
chr2 (302-388)||(30191189-30191274)
chr2 (302-388)||(32672847-32672932)
chr2 (297-355)||(6495544-6495601)
chr2 (173-231)||(17346032-17346089)
chr2 (325-355)||(18055073-18055103)
chr2 (325-355)||(26737507-26737537)
chr2 (179-228)||(40221488-40221538)
chr2 (365-394)||(15321457-15321486)
chr2 (175-228)||(18750126-18750178)
chr2 (174-227)||(32672842-32672895)
chr2 (179-227)||(32673020-32673069)
chr2 (172-228)||(7980003-7980058)
chr2 (179-226)||(11883751-11883799)
chr2 (177-224)||(19141853-19141898)
[»] chr1 (92 HSPs)
chr1 (172-231)||(47955304-47955363)
chr1 (171-228)||(8108993-8109050)
chr1 (297-351)||(17518481-17518535)
chr1 (171-228)||(49284406-49284463)
chr1 (297-351)||(47955429-47955483)
chr1 (174-228)||(48190771-48190825)
chr1 (297-350)||(22149580-22149633)
chr1 (171-228)||(39692000-39692057)
chr1 (171-231)||(13589656-13589715)
chr1 (166-226)||(22149701-22149761)
chr1 (176-231)||(17518599-17518653)
chr1 (173-228)||(32163043-32163098)
chr1 (173-228)||(44911024-44911079)
chr1 (302-396)||(47955311-47955404)
chr1 (173-228)||(48191355-48191410)
chr1 (297-351)||(8108899-8108953)
chr1 (174-228)||(9347126-9347180)
chr1 (297-351)||(41083031-41083085)
chr1 (173-231)||(47955605-47955663)
chr1 (174-231)||(41082909-41082966)
chr1 (177-228)||(50430081-50430132)
chr1 (177-231)||(1176839-1176893)
chr1 (174-228)||(6002237-6002291)
chr1 (173-231)||(31848189-31848247)
chr1 (174-228)||(48105116-48105170)
chr1 (177-230)||(8108724-8108777)
chr1 (171-224)||(27172545-27172598)
chr1 (171-228)||(48104675-48104732)
chr1 (172-228)||(4692433-4692489)
chr1 (177-225)||(46823846-46823894)
chr1 (176-228)||(50526472-50526524)
chr1 (175-226)||(13918869-13918920)
chr1 (173-228)||(19008750-19008805)
chr1 (174-229)||(20371352-20371406)
chr1 (173-228)||(26815119-26815174)
chr1 (173-228)||(28633719-28633774)
chr1 (177-228)||(28634157-28634208)
chr1 (172-223)||(50615238-50615289)
chr1 (172-223)||(50623066-50623117)
chr1 (174-228)||(6703894-6703948)
chr1 (174-228)||(13918446-13918500)
chr1 (174-228)||(26814694-26814748)
chr1 (174-228)||(27172116-27172169)
chr1 (173-227)||(39690793-39690847)
chr1 (173-231)||(41083208-41083265)
chr1 (172-226)||(42611183-42611237)
chr1 (177-230)||(1177016-1177069)
chr1 (174-227)||(20480613-20480665)
chr1 (176-228)||(6002894-6002946)
chr1 (171-223)||(19007732-19007783)
chr1 (172-228)||(20480166-20480221)
chr1 (171-231)||(22149400-22149458)
chr1 (172-228)||(46824278-46824334)
chr1 (173-228)||(9347551-9347605)
chr1 (297-348)||(31848016-31848067)
chr1 (174-224)||(1176717-1176766)
chr1 (173-231)||(17518302-17518359)
chr1 (174-228)||(21687025-21687079)
chr1 (177-227)||(44911438-44911488)
chr1 (174-224)||(49318170-49318219)
chr1 (174-228)||(50615621-50615674)
chr1 (174-228)||(50623449-50623502)
chr1 (173-226)||(6703459-6703512)
chr1 (302-355)||(13589656-13589707)
chr1 (302-394)||(22149659-22149748)
chr1 (171-224)||(31847892-31847945)
chr1 (171-228)||(33085668-33085725)
chr1 (177-226)||(42611616-42611665)
chr1 (177-224)||(31848019-31848067)
chr1 (175-226)||(46056904-46056953)
chr1 (297-349)||(46057016-46057068)
chr1 (172-228)||(48313792-48313848)
chr1 (173-224)||(999529-999579)
chr1 (302-388)||(17518308-17518392)
chr1 (302-396)||(41082914-41083006)
chr1 (302-388)||(47955572-47955657)
chr1 (197-228)||(49285055-49285086)
chr1 (171-226)||(50429653-50429708)
chr1 (173-224)||(50949569-50949620)
chr1 (302-352)||(8108993-8109042)
chr1 (177-226)||(22149580-22149630)
chr1 (174-224)||(49317752-49317801)
chr1 (367-396)||(8108978-8109007)
chr1 (179-227)||(17518481-17518530)
chr1 (302-355)||(17518599-17518650)
chr1 (172-228)||(20371038-20371092)
chr1 (177-225)||(46057019-46057068)
chr1 (175-228)||(47498495-47498547)
chr1 (177-226)||(50949164-50949213)
chr1 (172-224)||(999110-999161)
chr1 (302-354)||(8108726-8108777)
chr1 (174-222)||(21687473-21687520)
[»] chr7 (93 HSPs)
chr7 (173-231)||(9412322-9412380)
chr7 (174-231)||(3687653-3687710)
chr7 (172-228)||(44600135-44600191)
chr7 (297-351)||(9412202-9412256)
chr7 (174-228)||(44599489-44599543)
chr7 (297-350)||(13772793-13772846)
chr7 (174-231)||(13772898-13772955)
chr7 (171-231)||(9412020-9412080)
chr7 (172-228)||(37972396-37972452)
chr7 (302-396)||(9412281-9412374)
chr7 (173-228)||(10533033-10533088)
chr7 (173-228)||(13863312-13863367)
chr7 (173-228)||(37889259-37889314)
chr7 (174-228)||(9035293-9035347)
chr7 (174-228)||(37888833-37888887)
chr7 (171-228)||(20419324-20419381)
chr7 (172-228)||(3205093-3205149)
chr7 (173-229)||(9034866-9034922)
chr7 (172-220)||(13863964-13864012)
chr7 (172-228)||(17156965-17157021)
chr7 (172-228)||(22740154-22740210)
chr7 (172-224)||(29292920-29292972)
chr7 (173-228)||(8643766-8643821)
chr7 (173-228)||(13772640-13772695)
chr7 (177-228)||(20418891-20418942)
chr7 (174-231)||(3687353-3687411)
chr7 (297-351)||(3687534-3687588)
chr7 (302-396)||(3687613-3687705)
chr7 (297-351)||(6908391-6908445)
chr7 (173-222)||(23686723-23686772)
chr7 (177-228)||(18863970-18864021)
chr7 (174-225)||(29293349-29293400)
chr7 (173-228)||(37971959-37972014)
chr7 (173-228)||(46816311-46816366)
chr7 (175-225)||(5735253-5735303)
chr7 (174-228)||(13741557-13741611)
chr7 (302-352)||(18925229-18925279)
chr7 (172-226)||(38826915-38826969)
chr7 (302-355)||(9412028-9412080)
chr7 (171-228)||(13744233-13744289)
chr7 (302-355)||(27096170-27096223)
chr7 (302-355)||(27182080-27182133)
chr7 (297-350)||(33628501-33628554)
chr7 (299-355)||(5349635-5349691)
chr7 (175-231)||(8953886-8953941)
chr7 (172-228)||(16198977-16199033)
chr7 (174-226)||(18925062-18925114)
chr7 (174-228)||(3204669-3204721)
chr7 (297-348)||(15567169-15567220)
chr7 (178-228)||(18925229-18925280)
chr7 (177-231)||(27096168-27096223)
chr7 (177-231)||(27182080-27182135)
chr7 (176-231)||(29291808-29291863)
chr7 (173-228)||(33628660-33628715)
chr7 (173-227)||(6908212-6908265)
chr7 (177-227)||(6908485-6908534)
chr7 (177-231)||(27096339-27096392)
chr7 (177-231)||(27181911-27181964)
chr7 (172-214)||(34235736-34235778)
chr7 (297-355)||(34235852-34235910)
chr7 (297-355)||(35080125-35080183)
chr7 (172-222)||(42418589-42418639)
chr7 (174-228)||(48359320-48359373)
chr7 (169-228)||(5349733-5349789)
chr7 (302-355)||(13772898-13772950)
chr7 (173-226)||(18864404-18864456)
chr7 (174-227)||(23686421-23686473)
chr7 (174-231)||(29292038-29292095)
chr7 (171-228)||(30857904-30857961)
chr7 (176-229)||(34235977-34236030)
chr7 (174-227)||(35079960-35080012)
chr7 (302-355)||(38191388-38191440)
chr7 (174-222)||(27096047-27096094)
chr7 (174-222)||(27182209-27182256)
chr7 (177-229)||(42419028-42419079)
chr7 (181-227)||(5735382-5735429)
chr7 (304-351)||(5735382-5735429)
chr7 (177-226)||(15567276-15567322)
chr7 (177-228)||(22740591-22740641)
chr7 (297-355)||(8953721-8953779)
chr7 (175-228)||(18925322-18925373)
chr7 (178-231)||(38191387-38191440)
chr7 (175-229)||(39983700-39983754)
chr7 (177-222)||(5735553-5735598)
chr7 (179-227)||(6908391-6908440)
chr7 (169-225)||(8953597-8953651)
chr7 (171-228)||(15566989-15567046)
chr7 (323-352)||(15567017-15567046)
chr7 (171-228)||(36527381-36527437)
chr7 (171-224)||(38191259-38191312)
chr7 (174-227)||(38191566-38191619)
chr7 (302-346)||(23686723-23686766)
chr7 (325-353)||(34235977-34236005)
[»] chr8 (101 HSPs)
chr8 (174-231)||(41662400-41662457)
chr8 (171-231)||(12281121-12281181)
chr8 (176-231)||(765736-765791)
chr8 (297-351)||(15156062-15156116)
chr8 (174-231)||(15156182-15156239)
chr8 (297-350)||(37752237-37752290)
chr8 (172-228)||(9823361-9823417)
chr8 (172-231)||(43246173-43246232)
chr8 (297-351)||(12281247-12281301)
chr8 (173-231)||(15155882-15155940)
chr8 (173-231)||(16928941-16928999)
chr8 (297-355)||(18019910-18019968)
chr8 (174-228)||(39724048-39724102)
chr8 (173-226)||(13026634-13026687)
chr8 (174-231)||(16929239-16929296)
chr8 (174-231)||(37752413-37752470)
chr8 (297-350)||(41662281-41662334)
chr8 (297-350)||(43245994-43246047)
chr8 (297-353)||(9465695-9465751)
chr8 (302-396)||(765739-765832)
chr8 (177-228)||(13027281-13027332)
chr8 (302-396)||(41662359-41662452)
chr8 (297-348)||(43162417-43162468)
chr8 (302-396)||(43245876-43245969)
chr8 (297-351)||(765857-765911)
chr8 (174-228)||(22851390-22851444)
chr8 (297-351)||(34313941-34313995)
chr8 (174-228)||(37752084-37752138)
chr8 (174-231)||(12281423-12281480)
chr8 (174-231)||(43245871-43245928)
chr8 (172-228)||(13936721-13936776)
chr8 (176-228)||(25438794-25438846)
chr8 (302-396)||(12281129-12281222)
chr8 (173-228)||(13937389-13937444)
chr8 (173-228)||(34498555-34498610)
chr8 (173-228)||(37396707-37396762)
chr8 (171-226)||(41662518-41662573)
chr8 (174-228)||(9822748-9822802)
chr8 (174-228)||(23123338-23123392)
chr8 (174-228)||(37397145-37397199)
chr8 (174-227)||(3463946-3463999)
chr8 (171-228)||(24473768-24473825)
chr8 (297-355)||(33748157-33748217)
chr8 (302-350)||(16929067-16929115)
chr8 (297-352)||(7127827-7127882)
chr8 (302-396)||(15156141-15156234)
chr8 (172-231)||(41662105-41662164)
chr8 (174-224)||(3307338-3307388)
chr8 (177-227)||(15042148-15042198)
chr8 (174-228)||(24473343-24473397)
chr8 (174-231)||(34313765-34313820)
chr8 (302-355)||(12281423-12281475)
chr8 (179-231)||(18019915-18019968)
chr8 (171-231)||(23123514-23123572)
chr8 (178-231)||(43162536-43162588)
chr8 (176-228)||(74688-74739)
chr8 (325-396)||(74941-75011)
chr8 (176-228)||(15442765-15442817)
chr8 (172-231)||(18020085-18020142)
chr8 (172-228)||(20861638-20861694)
chr8 (173-228)||(2856525-2856580)
chr8 (173-224)||(6199100-6199151)
chr8 (302-388)||(15155888-15155973)
chr8 (177-228)||(15444647-15444698)
chr8 (171-226)||(17431284-17431339)
chr8 (175-226)||(22851958-22852009)
chr8 (177-228)||(34498125-34498176)
chr8 (174-228)||(9623502-9623556)
chr8 (302-396)||(16928947-16929038)
chr8 (297-351)||(22786933-22786987)
chr8 (302-355)||(23123514-23123564)
chr8 (172-224)||(6092775-6092825)
chr8 (181-230)||(7127660-7127708)
chr8 (297-350)||(11007654-11007707)
chr8 (302-355)||(16929239-16929291)
chr8 (177-226)||(22786843-22786892)
chr8 (302-355)||(37752413-37752465)
chr8 (174-231)||(43162234-43162290)
chr8 (302-355)||(43246173-43246225)
chr8 (297-349)||(74864-74916)
chr8 (297-341)||(43597913-43597957)
chr8 (196-231)||(74981-75016)
chr8 (179-229)||(9465700-9465751)
chr8 (176-223)||(33726696-33726743)
chr8 (365-396)||(37752181-37752212)
chr8 (297-355)||(3463817-3463874)
chr8 (173-227)||(6198657-6198711)
chr8 (171-221)||(9465604-9465653)
chr8 (177-226)||(11007657-11007707)
chr8 (297-355)||(37670128-37670186)
chr8 (302-352)||(37752089-37752138)
chr8 (193-227)||(43598756-43598790)
chr8 (177-225)||(74864-74913)
chr8 (194-231)||(9465871-9465908)
chr8 (171-228)||(11007828-11007885)
chr8 (179-227)||(15156062-15156111)
chr8 (179-231)||(33748157-33748212)
chr8 (187-224)||(39723415-39723452)
chr8 (302-355)||(41662112-41662164)
chr8 (172-228)||(25439126-25439181)
chr8 (179-226)||(37752242-37752290)
[»] scaffold0319 (6 HSPs)
scaffold0319 (172-231)||(6392-6451)
scaffold0319 (297-350)||(6575-6628)
scaffold0319 (302-396)||(6653-6745)
scaffold0319 (174-231)||(6694-6750)
scaffold0319 (302-355)||(6399-6451)
scaffold0319 (179-226)||(6575-6623)
[»] scaffold0192 (4 HSPs)
scaffold0192 (172-231)||(25366-25425)
scaffold0192 (297-350)||(25247-25300)
scaffold0192 (302-394)||(25327-25418)
scaffold0192 (179-226)||(25247-25295)
[»] chr4 (99 HSPs)
chr4 (173-228)||(56505692-56505747)
chr4 (171-231)||(13198903-13198963)
chr4 (302-396)||(16555773-16555866)
chr4 (173-228)||(50678778-50678833)
chr4 (297-351)||(11241567-11241621)
chr4 (297-350)||(16555695-16555748)
chr4 (171-228)||(24775783-24775840)
chr4 (298-355)||(27304890-27304947)
chr4 (171-228)||(36095814-36095871)
chr4 (178-231)||(49178813-49178866)
chr4 (297-349)||(22681702-22681754)
chr4 (172-228)||(28196773-28196829)
chr4 (172-231)||(18077199-18077258)
chr4 (173-228)||(28196345-28196400)
chr4 (177-228)||(36096475-36096526)
chr4 (297-352)||(49178639-49178694)
chr4 (301-351)||(3930357-3930407)
chr4 (173-231)||(3930477-3930534)
chr4 (297-351)||(13198727-13198781)
chr4 (173-231)||(16555514-16555572)
chr4 (174-228)||(16555817-16555871)
chr4 (174-228)||(32703650-32703704)
chr4 (174-228)||(50679424-50679478)
chr4 (175-231)||(8181992-8182049)
chr4 (175-228)||(25161879-25161932)
chr4 (171-228)||(26207746-26207803)
chr4 (171-228)||(32703222-32703279)
chr4 (172-228)||(9023680-9023736)
chr4 (173-225)||(9380744-9380796)
chr4 (175-231)||(22681576-22681631)
chr4 (297-349)||(35393599-35393651)
chr4 (172-228)||(43051252-43051308)
chr4 (302-396)||(3930436-3930528)
chr4 (297-387)||(5206100-5206190)
chr4 (173-228)||(9023243-9023298)
chr4 (173-228)||(39744465-39744520)
chr4 (171-228)||(169010-169068)
chr4 (174-228)||(4239366-4239420)
chr4 (297-351)||(8488307-8488361)
chr4 (174-228)||(9380307-9380361)
chr4 (177-231)||(13198606-13198660)
chr4 (171-228)||(293217-293274)
chr4 (302-355)||(8181996-8182049)
chr4 (175-228)||(11529169-11529222)
chr4 (172-228)||(26207359-26207414)
chr4 (171-231)||(35393773-35393832)
chr4 (172-228)||(43050605-43050661)
chr4 (171-227)||(54508812-54508868)
chr4 (173-224)||(292781-292832)
chr4 (173-228)||(11241661-11241715)
chr4 (172-227)||(25225399-25225454)
chr4 (173-228)||(45830196-45830251)
chr4 (174-228)||(169439-169493)
chr4 (172-229)||(8182171-8182229)
chr4 (179-228)||(49178644-49178694)
chr4 (174-231)||(11241389-11241446)
chr4 (297-396)||(13198603-13198702)
chr4 (302-355)||(16555520-16555572)
chr4 (173-226)||(22681881-22681934)
chr4 (174-227)||(23540253-23540306)
chr4 (179-231)||(27304890-27304943)
chr4 (173-222)||(56506580-56506629)
chr4 (173-228)||(23539840-23539893)
chr4 (174-226)||(39086625-39086677)
chr4 (171-227)||(45828991-45829047)
chr4 (173-228)||(5205987-5206042)
chr4 (302-353)||(8182171-8182222)
chr4 (302-388)||(13198870-13198955)
chr4 (173-228)||(39744029-39744084)
chr4 (302-351)||(5206231-5206278)
chr4 (302-388)||(8488447-8488530)
chr4 (302-387)||(18077167-18077251)
chr4 (174-231)||(27304718-27304773)
chr4 (174-224)||(43292361-43292411)
chr4 (174-227)||(5206231-5206283)
chr4 (175-228)||(43292038-43292091)
chr4 (177-226)||(47219203-47219252)
chr4 (169-225)||(7603422-7603477)
chr4 (175-231)||(8488479-8488534)
chr4 (179-226)||(16555695-16555743)
chr4 (172-224)||(39415528-39415580)
chr4 (172-228)||(48405960-48406015)
chr4 (188-227)||(48406386-48406425)
chr4 (297-351)||(24775641-24775695)
chr4 (302-352)||(56505698-56505747)
chr4 (174-231)||(3930179-3930235)
chr4 (179-231)||(5206132-5206185)
chr4 (175-231)||(7603146-7603200)
chr4 (171-228)||(8488185-8488242)
chr4 (302-355)||(11241394-11241446)
chr4 (163-204)||(21871315-21871356)
chr4 (163-204)||(21927176-21927217)
chr4 (194-227)||(39415244-39415277)
chr4 (174-215)||(49178533-49178574)
chr4 (302-355)||(49178813-49178865)
chr4 (297-349)||(7603296-7603348)
chr4 (173-228)||(23432475-23432531)
chr4 (297-352)||(54508997-54509050)
chr4 (187-227)||(54509116-54509156)
[»] scaffold0802 (6 HSPs)
scaffold0802 (297-351)||(1297-1351)
scaffold0802 (174-231)||(1417-1474)
scaffold0802 (302-396)||(1376-1469)
scaffold0802 (174-231)||(1118-1175)
scaffold0802 (302-388)||(1123-1208)
scaffold0802 (179-227)||(1297-1346)
[»] chr6 (63 HSPs)
chr6 (297-355)||(2762606-2762664)
chr6 (173-231)||(3403986-3404044)
chr6 (297-355)||(10039840-10039898)
chr6 (297-350)||(3403867-3403920)
chr6 (297-350)||(30388242-30388295)
chr6 (171-231)||(18241851-18241911)
chr6 (302-396)||(3403945-3404038)
chr6 (173-228)||(33829636-33829691)
chr6 (174-228)||(3403717-3403771)
chr6 (297-351)||(18242033-18242087)
chr6 (174-228)||(33828990-33829044)
chr6 (297-351)||(33972190-33972244)
chr6 (297-354)||(11656603-11656660)
chr6 (174-231)||(11656779-11656836)
chr6 (172-228)||(7654548-7654604)
chr6 (171-231)||(21031976-21032035)
chr6 (325-396)||(21032005-21032076)
chr6 (173-228)||(10039675-10039729)
chr6 (174-228)||(10087858-10087912)
chr6 (173-223)||(21032285-21032335)
chr6 (174-228)||(33974299-33974353)
chr6 (174-231)||(18242153-18242210)
chr6 (177-230)||(30388360-30388413)
chr6 (297-353)||(13579527-13579583)
chr6 (325-396)||(18242112-18242183)
chr6 (177-231)||(3825530-3825583)
chr6 (173-231)||(13579648-13579705)
chr6 (174-224)||(30388062-30388111)
chr6 (297-351)||(33658563-33658617)
chr6 (324-396)||(2762509-2762581)
chr6 (179-231)||(2762611-2762664)
chr6 (179-231)||(10039840-10039893)
chr6 (171-228)||(29074372-29074428)
chr6 (171-228)||(29079136-29079192)
chr6 (171-228)||(29106945-29107001)
chr6 (325-388)||(11656746-11656809)
chr6 (179-231)||(12714436-12714488)
chr6 (171-231)||(23250589-23250648)
chr6 (302-388)||(18241859-18241944)
chr6 (181-231)||(21032107-21032158)
chr6 (304-355)||(21032107-21032158)
chr6 (302-396)||(30388320-30388411)
chr6 (177-224)||(32734000-32734047)
chr6 (302-352)||(3403722-3403771)
chr6 (171-228)||(2354810-2354867)
chr6 (302-355)||(12714436-12714488)
chr6 (172-229)||(33655114-33655170)
chr6 (179-230)||(11656608-11656660)
chr6 (172-224)||(31598732-31598783)
chr6 (302-345)||(31598157-31598200)
chr6 (172-227)||(31598274-31598328)
chr6 (302-345)||(31598641-31598684)
chr6 (325-355)||(3825553-3825583)
chr6 (302-352)||(10039681-10039729)
chr6 (174-228)||(22684358-22684411)
chr6 (174-228)||(22754657-22754710)
chr6 (326-355)||(13579648-13579677)
chr6 (174-231)||(33971994-33972050)
chr6 (191-231)||(2762500-2762540)
chr6 (179-226)||(3403867-3403915)
chr6 (179-226)||(30388242-30388290)
chr6 (178-221)||(31598157-31598201)
chr6 (178-221)||(31598641-31598685)
[»] chr3 (85 HSPs)
chr3 (174-228)||(20969019-20969073)
chr3 (297-351)||(10293730-10293784)
chr3 (297-351)||(20968897-20968951)
chr3 (174-231)||(10293906-10293963)
chr3 (297-350)||(18875012-18875065)
chr3 (297-349)||(9026855-9026907)
chr3 (171-231)||(20968715-20968775)
chr3 (173-228)||(48159896-48159951)
chr3 (171-229)||(47871121-47871178)
chr3 (174-227)||(1927772-1927825)
chr3 (174-231)||(18875188-18875245)
chr3 (172-228)||(53687886-53687942)
chr3 (302-388)||(18875155-18875240)
chr3 (173-228)||(40848961-40849016)
chr3 (173-227)||(18874881-18874935)
chr3 (173-227)||(45060872-45060926)
chr3 (174-228)||(47666335-47666389)
chr3 (174-228)||(48160333-48160387)
chr3 (174-227)||(8314013-8314066)
chr3 (174-231)||(10293608-10293665)
chr3 (174-230)||(17372298-17372354)
chr3 (175-227)||(22429159-22429211)
chr3 (171-227)||(53766580-53766636)
chr3 (177-228)||(1928434-1928484)
chr3 (300-355)||(4947384-4947439)
chr3 (297-352)||(13657621-13657676)
chr3 (177-228)||(27238900-27238951)
chr3 (297-355)||(1101087-1101144)
chr3 (173-227)||(8315083-8315136)
chr3 (297-355)||(17372470-17372528)
chr3 (173-227)||(27238464-27238518)
chr3 (173-223)||(42455789-42455839)
chr3 (174-228)||(42672978-42673031)
chr3 (297-355)||(45060769-45060826)
chr3 (332-396)||(10293642-10293706)
chr3 (171-228)||(26007179-26007235)
chr3 (177-228)||(13657621-13657673)
chr3 (177-231)||(14015867-14015923)
chr3 (173-228)||(21895656-21895712)
chr3 (172-228)||(40848519-40848574)
chr3 (174-222)||(45060596-45060644)
chr3 (176-227)||(1100917-1100968)
chr3 (297-352)||(3644720-3644775)
chr3 (302-388)||(10293873-10293958)
chr3 (297-355)||(14015867-14015926)
chr3 (177-231)||(17372470-17372525)
chr3 (300-351)||(18874885-18874935)
chr3 (302-396)||(20968976-20969068)
chr3 (173-227)||(1101182-1101236)
chr3 (174-228)||(3353128-3353181)
chr3 (174-228)||(3644783-3644837)
chr3 (174-228)||(10348799-10348853)
chr3 (174-228)||(24485460-24485513)
chr3 (174-228)||(42673296-42673349)
chr3 (178-227)||(4947263-4947312)
chr3 (179-231)||(4947386-4947439)
chr3 (172-225)||(17441066-17441119)
chr3 (173-226)||(47665910-47665963)
chr3 (302-354)||(17372303-17372354)
chr3 (179-226)||(18875017-18875065)
chr3 (177-225)||(26007622-26007670)
chr3 (177-231)||(1101087-1101141)
chr3 (179-225)||(9026860-9026907)
chr3 (174-229)||(13657445-13657500)
chr3 (177-228)||(14015964-14016014)
chr3 (302-388)||(20968723-20968808)
chr3 (177-228)||(23630035-23630086)
chr3 (173-228)||(36180990-36181045)
chr3 (162-228)||(47870811-47870877)
chr3 (302-353)||(47871121-47871170)
chr3 (174-225)||(53688306-53688356)
chr3 (177-228)||(53766166-53766217)
chr3 (302-352)||(3644783-3644832)
chr3 (174-228)||(9027033-9027086)
chr3 (175-228)||(17372594-17372645)
chr3 (297-351)||(17440880-17440934)
chr3 (366-396)||(18874957-18874987)
chr3 (174-228)||(21896511-21896564)
chr3 (177-231)||(26540694-26540747)
chr3 (174-224)||(42627550-42627599)
chr3 (181-226)||(3353553-3353597)
chr3 (179-227)||(20968897-20968946)
chr3 (302-347)||(47871005-47871049)
chr3 (177-228)||(3644720-3644772)
chr3 (176-228)||(22429596-22429647)
[»] scaffold0001 (9 HSPs)
scaffold0001 (174-231)||(438930-438987)
scaffold0001 (297-348)||(439021-439072)
scaffold0001 (171-231)||(183660-183719)
scaffold0001 (302-387)||(438935-439019)
scaffold0001 (173-231)||(439196-439254)
scaffold0001 (302-388)||(439165-439248)
scaffold0001 (297-348)||(183544-183595)
scaffold0001 (177-227)||(183367-183416)
scaffold0001 (177-224)||(183544-183592)
[»] chr5 (81 HSPs)
chr5 (297-350)||(18433138-18433191)
chr5 (173-230)||(25115756-25115813)
chr5 (173-230)||(25174848-25174905)
chr5 (171-231)||(18433313-18433373)
chr5 (174-228)||(18433015-18433069)
chr5 (174-228)||(18817611-18817665)
chr5 (297-351)||(25115880-25115934)
chr5 (297-351)||(25174972-25175026)
chr5 (173-231)||(25175148-25175206)
chr5 (173-229)||(25116060-25116116)
chr5 (172-228)||(26020448-26020504)
chr5 (297-349)||(34576988-34577040)
chr5 (173-228)||(12498566-12498621)
chr5 (173-228)||(12498928-12498983)
chr5 (302-396)||(18433020-18433113)
chr5 (173-228)||(18816951-18817006)
chr5 (173-228)||(26571164-26571219)
chr5 (171-228)||(19514963-19515020)
chr5 (297-349)||(26020573-26020625)
chr5 (177-228)||(11351427-11351478)
chr5 (173-224)||(16466746-16466797)
chr5 (180-231)||(16726084-16726135)
chr5 (177-228)||(21207229-21207280)
chr5 (173-228)||(22428933-22428987)
chr5 (297-355)||(5187645-5187703)
chr5 (173-231)||(33324835-33324893)
chr5 (171-228)||(11350805-11350861)
chr5 (297-348)||(5779742-5779793)
chr5 (173-228)||(22429196-22429250)
chr5 (302-396)||(25115762-25115855)
chr5 (302-396)||(25174854-25174947)
chr5 (302-396)||(26020455-26020548)
chr5 (173-228)||(26570728-26570783)
chr5 (171-226)||(34147512-34147567)
chr5 (174-228)||(3888239-3888293)
chr5 (297-355)||(9869735-9869793)
chr5 (171-224)||(2817146-2817199)
chr5 (173-230)||(5187828-5187885)
chr5 (175-228)||(22729440-22729492)
chr5 (177-226)||(31569910-31569958)
chr5 (171-228)||(37610199-37610255)
chr5 (171-228)||(37780317-37780373)
chr5 (171-228)||(41383167-41383223)
chr5 (302-354)||(5187828-5187879)
chr5 (174-226)||(37780744-37780796)
chr5 (177-231)||(9869735-9869790)
chr5 (174-228)||(19514525-19514580)
chr5 (302-388)||(25175115-25175200)
chr5 (177-228)||(34576870-34576920)
chr5 (297-355)||(9665649-9665707)
chr5 (297-355)||(12441187-12441245)
chr5 (302-388)||(18433281-18433365)
chr5 (174-228)||(34577164-34577217)
chr5 (177-227)||(41382896-41382945)
chr5 (171-228)||(3888662-3888719)
chr5 (171-227)||(9869557-9869611)
chr5 (174-227)||(23011079-23011131)
chr5 (171-228)||(43463753-43463809)
chr5 (173-226)||(43464194-43464246)
chr5 (177-228)||(9665560-9665609)
chr5 (303-355)||(16726084-16726135)
chr5 (177-224)||(23011261-23011309)
chr5 (171-227)||(25940518-25940574)
chr5 (177-231)||(12441187-12441242)
chr5 (174-220)||(12441320-12441364)
chr5 (297-348)||(23011261-23011312)
chr5 (302-353)||(25116060-25116110)
chr5 (365-396)||(34576932-34576963)
chr5 (174-224)||(10098519-10098569)
chr5 (171-228)||(5187548-5187605)
chr5 (174-227)||(9665828-9665879)
chr5 (367-396)||(22429181-22429210)
chr5 (310-351)||(23011091-23011131)
chr5 (179-227)||(25115885-25115934)
chr5 (179-227)||(25174977-25175026)
chr5 (177-225)||(34576991-34577040)
chr5 (172-228)||(11316974-11317030)
chr5 (179-226)||(18433143-18433191)
chr5 (165-228)||(34147132-34147193)
chr5 (174-226)||(37610620-37610671)
chr5 (324-352)||(41383167-41383195)
[»] scaffold0110 (4 HSPs)
scaffold0110 (297-351)||(45684-45738)
scaffold0110 (173-231)||(45804-45861)
scaffold0110 (302-396)||(45763-45855)
scaffold0110 (172-231)||(45535-45593)
[»] scaffold1221 (3 HSPs)
scaffold1221 (297-351)||(1604-1658)
scaffold1221 (174-228)||(1511-1564)
scaffold1221 (177-231)||(1781-1834)
[»] scaffold0328 (2 HSPs)
scaffold0328 (174-228)||(6795-6849)
scaffold0328 (174-228)||(6152-6206)
[»] scaffold0535 (1 HSPs)
scaffold0535 (171-224)||(10009-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (172-228)||(38695-38751)
[»] scaffold0017 (1 HSPs)
scaffold0017 (174-228)||(185274-185328)
[»] scaffold0002 (2 HSPs)
scaffold0002 (297-343)||(412044-412090)
scaffold0002 (174-231)||(411923-411979)
[»] scaffold0029 (1 HSPs)
scaffold0029 (172-229)||(9903-9960)
[»] scaffold0460 (2 HSPs)
scaffold0460 (172-224)||(328-380)
scaffold0460 (174-228)||(763-816)
[»] scaffold0009 (2 HSPs)
scaffold0009 (171-231)||(205684-205743)
scaffold0009 (325-355)||(205713-205743)
[»] scaffold0598 (3 HSPs)
scaffold0598 (297-352)||(6751-6806)
scaffold0598 (175-227)||(6877-6927)
scaffold0598 (176-226)||(6609-6659)
[»] scaffold0069 (2 HSPs)
scaffold0069 (174-229)||(50506-50560)
scaffold0069 (172-228)||(50073-50127)
[»] scaffold0376 (3 HSPs)
scaffold0376 (174-231)||(7597-7653)
scaffold0376 (172-228)||(7453-7508)
scaffold0376 (302-355)||(7597-7648)
[»] scaffold0015 (3 HSPs)
scaffold0015 (174-231)||(17153-17209)
scaffold0015 (297-351)||(16976-17030)
scaffold0015 (193-231)||(16870-16908)
[»] scaffold0176 (2 HSPs)
scaffold0176 (173-228)||(20043-20098)
scaffold0176 (171-228)||(19618-19674)
[»] scaffold0035 (3 HSPs)
scaffold0035 (297-354)||(73086-73143)
scaffold0035 (175-231)||(72967-73023)
scaffold0035 (177-230)||(73089-73143)


Alignment Details
Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 20347521 - 20347461
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20347521 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 20347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 30190922 - 30190980
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30190922 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 30190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 11883620 - 11883680
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11883620 aaaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 32673074 - 32673020
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32673074 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 11883746 - 11883799
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11883746 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 11883980 - 11883923
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 6171512 - 6171456
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6171512 aaggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 18296749 - 18296693
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18296749 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 24832329 - 24832385
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24832329 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 24832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 2639537 - 2639482
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 26841586 - 26841641
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 40469778 - 40469685
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  40469778 aattgcactttttccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 40469685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 2638816 - 2638874
Alignment:
Q  170 caaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2638816 caaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 6171388 - 6171334
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6171388 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 6171334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 20347395 - 20347341
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20347395 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 20347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 30191046 - 30191100
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30191046 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 30191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 37720202 - 37720258
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37720202 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 40469786 - 40469726
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  40469786 aaaggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctc 40469726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 5378660 - 5378715
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 24832336 - 24832429
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||    
T  24832336 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccct 24832429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 30190928 - 30191021
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  30190928 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 30191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 40221543 - 40221488
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  40221543 tgttcaattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 41790967 - 41790912
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 17850978 - 17851032
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8851639 - 8851582
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  8851639 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 30191279 - 30191222
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 40469660 - 40469607
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  40469660 tgttcaattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 8851146 - 8851202
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  8851146 aaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 5380014 - 5379959
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  5380014 aggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 6495778 - 6495723
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  6495778 aaaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 11883628 - 11883721
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         |||| |||||||||| ||||||||||||||||    
T  11883628 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgccccct 11883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 32673199 - 32673141
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  32673199 aaaggtttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 15920966 - 15920912
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  15920966 tgttcaattgcacttttgccccctaactttttgctaattgtgcgattttacaccc 15920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 17345854 - 17345912
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||    
T  17345854 tgttcaattgcacttttgccccctatatttttgttaattgtgcgatttttcaccccctc 17345912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 26737835 - 26737781
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 26737479 - 26737537
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||    
T  26737479 aaaggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 40469427 - 40469484
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 43495306 - 43495366
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||| || ||||||    
T  43495306 aaaggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 6325404 - 6325349
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  6325404 aaagacttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 7664247 - 7664302
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  7664247 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 7664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 11883975 - 11883890
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         |||||||||||||| |||||||||    
T  11883975 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatctttt 11883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 20347162 - 20347217
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  20347162 aggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 20347513 - 20347420
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||| |||||||||||||||||||||| |||||    
T  20347513 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatctttttgtcccct 20347420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7664727 - 7664673
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 15920781 - 15920835
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctc 15920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 16910827 - 16910881
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 29230281 - 29230334
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29230281 aggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6171156 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 6324924 - 6324967
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgca 6324967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 18055169 - 18055224
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| | ||||||  |||||||||||||||||||||||||||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctc 18055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 18055367 - 18055316
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcacccc 18055316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  43495535 ttaattgcacttttccccc-tatctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7591904 - 7591850
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||  |||| | ||||||||||| ||||||||||||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 15321515 - 15321565
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 18055166 - 18055224
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| |||||||||||||| || |||  |||||| ||||||||||||||||||||||||    
T  18055166 tgtttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctc 18055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 43495538 - 43495481
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||||||    
T  43495538 tgtttaattgcacttttccccct-atctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 5793444 - 5793497
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| ||||||||||||||||||| | |  |||||||||||||||||||||||    
T  5793444 aaaggtttaattgcacttttcccccttgtagtttgccaattgtgcgattttgca 5793497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 16911321 - 16911269
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26692393 - 26692450
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||| ||| ||||  |||| ||||||||||||||||||||||    
T  26692393 aaaggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcacccc 26692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 43495658 - 43495602
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||||    
T  43495658 ggcttaattgcacttt-cccacctatattttgctaattgtgcgattttgcatcccctc 43495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 19141446 - 19141497
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcacccc 19141497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 32673191 - 32673102
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccc 393  Q
    |||||||||||| ||||| ||||||| || |||||||||||||||||||||||          |||||||||||||||||||||||| ||||    
T  32673191 aattgcactttttcccct-atctttt-gccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatcttttcgccc 32673102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  40221313 ggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 40469454 - 40469517
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  40469454 ttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 40469517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcaccccctc 17345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 30191274 - 30191189
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| ||||||||   |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  30191274 aattgcacttttcccccctatcttttat-taattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 30191189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 32672847 - 32672932
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||||  ||||||||||| | ||||||||||||||||||||| |||         |||||||||||||||| |||||||    
T  32672847 aattgcacttttgttccttatctttt-gttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatctttt 32672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 6495544 - 6495601
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||||||||| ||| ||||||||||| |||||||| | |||||||||||||    
T  6495544 tgtttaattgcacttttgtcccctatctttttgccaattgtgcta-tttgcaccccctc 6495601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 17346089 - 17346032
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| ||   |||||||||| ||||||||||||||||||| ||||    
T  17346089 aggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Original strand, 18055073 - 18055103
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||||||||||||    
T  18055073 ttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Original strand, 26737507 - 26737537
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||||||||||||    
T  26737507 ttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 40221538 - 40221488
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 394
Target Start/End: Original strand, 15321457 - 15321486
Alignment:
Q  365 gagcgattttgcaccccatctttttgcccc 394  Q
    ||||||||||||||||||||||||||||||    
T  15321457 gagcgattttgcaccccatctttttgcccc 15321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||||| |||  |||| ||||||||||||||||||||||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 32672842 - 32672895
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||   || |||||||||  ||||||||||||||||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 7980058 - 7980003
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| || | |||  ||||| |||||||||||||||||||||    
T  7980058 aaggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19141898 - 19141853
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  19141898 ttaattgcacttt--ccccctatagtttgccaattgtgcgattttgca 19141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 47955304 - 47955363
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47955304 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 47955363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8109050 - 8108993
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8109050 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 17518535 - 17518481
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518535 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 49284406 - 49284463
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49284406 aaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 47955429 - 47955483
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47955429 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 47955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 48190771 - 48190825
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 22149633 - 22149580
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22149633 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 39692057 - 39692000
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39692057 aaaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 13589715 - 13589656
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13589715 aaaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 22149761 - 22149701
Alignment:
Q  166 tttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22149761 tttataaaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 17518653 - 17518599
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 32163098 - 32163043
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 44911024 - 44911079
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 47955311 - 47955404
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  47955311 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 47955404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 48191410 - 48191355
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 8108953 - 8108899
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8108953 tgttcaattgcacttttgccccatatctttttgctaattgtgcgattttacaccc 8108899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9347126 - 9347180
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 41083031 - 41083085
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  41083031 tgttcaattgtacttttgccccttatctttttactaattgtgcgattttgcaccc 41083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 47955663 - 47955605
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  47955663 aggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 41082909 - 41082966
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctc 41082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 6002237 - 6002291
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 31848247 - 31848189
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||    
T  31848247 aggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc 31848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 48105170 - 48105116
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 8108724 - 8108777
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct 8108777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 27172598 - 27172545
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  27172598 aaaggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgca 27172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 48104675 - 48104732
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  48104675 aaaggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcacccc 48104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 4692489 - 4692433
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  4692489 aaggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 19008805 - 19008750
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  19008805 aggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacccc 19008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 26815174 - 26815119
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  26815174 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 26815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 28633719 - 28633774
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  28633719 aggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 28634208 - 28634157
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 28634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 50615238 - 50615289
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50615238 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 50623066 - 50623117
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50623066 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 6703948 - 6703894
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 13918446 - 13918500
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 26814694 - 26814748
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 27172116 - 27172169
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 39690793 - 39690847
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||    
T  39690793 aggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 41083265 - 41083208
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||    
T  41083265 aggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 42611183 - 42611237
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  42611183 aaggtttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 1177069 - 1177016
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||| |||||||||| || |||||||| ||||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 19007732 - 19007783
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  19007732 aaaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 20480166 - 20480221
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  20480166 aaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 22149400 - 22149458
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||    
T  22149400 aaaggcttaattgcactttt-ccccctatc-tttggtaattgtgcgattttgcaccccctc 22149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 46824334 - 46824278
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| || |||||  |||||||||||||| ||||||||||||    
T  46824334 aaggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcacccc 46824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 9347605 - 9347551
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||    
T  9347605 aggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 31848016 - 31848067
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  31848016 tgtttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  1176717 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 17518302 - 17518359
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||    
T  17518302 aggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 44911488 - 44911438
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccc 44911438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 49318219 - 49318170
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  49318219 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50615674 - 50615621
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50623502 - 50623449
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 6703459 - 6703512
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| || |||||  ||| |||||||||||||||||||||    
T  6703459 aggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacc 6703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 13589707 - 13589656
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  13589707 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 22149748 - 22149659
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 394  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||| |||           |||||||||||||||||||||||||||||    
T  22149748 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcacctcct--tttttttttagcgattttgcaccccatctttttgcccc 22149659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 31847892 - 31847945
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||| ||||||||    
T  31847892 aaaggtttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 33085668 - 33085725
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| |||||||| |||||| ||||| |||||||  |||||||||||||    
T  33085668 aaaggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc 33085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 42611665 - 42611616
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacc 42611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 224  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||||||||    
T  46056904 gcttaattgcacttt--ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 46057016 - 46057068
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  46057016 tgtttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 48313848 - 48313792
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||| |||  |||||||||| |||||||| ||||||||||||    
T  48313848 aaggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 999579 - 999529
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  999579 aggcttaattgcacttttc-cccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 17518308 - 17518392
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||| ||| ||||||||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  17518308 aattgcaccttt-ccccttatctttt-gttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 17518392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 41082914 - 41083006
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    ||||| |||||| |||| |||||||| || ||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||    
T  41082914 aattgtactttttccccctatctttt-gccaattgtgcgattttgcatcccctcttttttttt-agcgattttgcaccccatctttttgccccct 41083006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 47955657 - 47955572
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| ||||||||   |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  47955657 aattgcacttttcccccctatcttttat-taattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 47955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 49285086 - 49285055
Alignment:
Q  197 tatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcacccc 49285055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 50429653 - 50429708
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||| ||||||||||  |||  ||||| |||||||||||||||||||    
T  50429653 aaaggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 50949620 - 50949569
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| |||||||||||| |||||||||  |||| ||||||||||||||||||    
T  50949620 aggcataattgcactttccccccctatagtttgtcaattgtgcgattttgca 50949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 8109042 - 8108993
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  8109042 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||||| |||| |||||||| || |||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 49317752 - 49317801
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||||||    
T  49317752 ggcttaattgcactttt-ccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 8109007 - 8108978
Alignment:
Q  367 gcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||||||||    
T  8109007 gcgattttgcaccccatctttttgccccct 8108978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 17518650 - 17518599
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  17518650 aattgcacttttccccct-atctttt-gccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 20371038 - 20371092
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  20371038 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 20371092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 46057019 - 46057068
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  46057019 ttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 50949164 - 50949213
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||| ||||||||| |||||  | |||||||||||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacc 50949213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 999110 - 999161
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| ||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  999110 aaggtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 8108726 - 8108777
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccct 354  Q
    |||||||||||| | || |||||||| | ||||||||||||||||||||||||    
T  8108726 aattgcacttttcctccctatctttt-gttaattgtgcgattttgcaccccct 8108777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 9412380 - 9412322
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 9412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 3687710 - 3687653
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 3687653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 44600191 - 44600135
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44600191 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 9412256 - 9412202
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9412256 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 9412202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 44599489 - 44599543
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 13772846 - 13772793
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13772846 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 13772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 13772955 - 13772898
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 9412020 - 9412080
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  9412020 aaaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 37972452 - 37972396
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37972452 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 9412374 - 9412281
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  9412374 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 9412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 10533033 - 10533088
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 13863312 - 13863367
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 37889314 - 37889259
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37888833 - 37888887
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 20419381 - 20419324
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  20419381 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 3205149 - 3205093
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  3205149 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 9034866 - 9034922
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  9034866 aggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 13864012 - 13863964
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13864012 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 17156965 - 17157021
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  17156965 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 22740154 - 22740210
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  22740154 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 29292920 - 29292972
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 8643821 - 8643766
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  8643821 aggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 13772640 - 13772695
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  13772640 aggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 3687353 - 3687411
Alignment:
Q  174 ggcttaattgcacttttcccc-cctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 3687588 - 3687534
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  3687588 tgttcaattgcacttttgtcccttatttttttgctaattgtgcgattttacaccc 3687534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 3687705 - 3687613
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  3687705 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc-ttttttttgagcgattttgcaccccatctttttgccccct 3687613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 6908445 - 6908391
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  6908445 tgttcaattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 23686772 - 23686723
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23686772 aggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18863970 - 18864021
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 29293400 - 29293349
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 37971959 - 37972014
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||    
T  37971959 aggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 46816366 - 46816311
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  46816366 aggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 13741557 - 13741611
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcacccc 13741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 18925279 - 18925229
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  18925279 aattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 38826969 - 38826915
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||| |||||||||||||  |||| ||||||||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacc 38826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 9412028 - 9412080
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  9412028 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 13744289 - 13744233
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  13744289 aaaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 27096170 - 27096223
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  27096170 aattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 27182133 - 27182080
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  27182133 aattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27182080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 33628501 - 33628554
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||| ||||| || |||||||||||||||||||| ||||||||||    
T  33628501 tgttcaattgcacatttgcaccctatctttttgctaattgtgcaattttgcacc 33628554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 5349691 - 5349635
Alignment:
Q  299 ttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||| |||||||||||  ||||||| ||||||||| |||||    
T  5349691 ttcaattgcacttttgccccctatctttttgcatattgtgcaattttgcactccctc 5349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  8953941 gcttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 16199033 - 16198977
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||  |||  |||||||||||||||||||||||||||    
T  16199033 aaggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcacccc 16198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3204669 - 3204721
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  3204669 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 15567220 - 15567169
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    ||||||||||||| |||||||| | ||||||||||||||||| |||||||||    
T  15567220 tgttcaattgcacgtttgccccctctctttttgctaattgtgtgattttgca 15567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 18925280 - 18925229
Alignment:
Q  178 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 27096168 - 27096223
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27096168 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 27182135 - 27182080
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27182135 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27182080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 29291808 - 29291863
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| | ||||||||||||  |||| |||||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctc 29291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 33628715 - 33628660
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  33628715 aggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6908212 - 6908265
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  6908212 aggcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  6908534 ttaattgcacttt-cccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||    
T  27181911 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 34235736 - 34235778
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtg 214  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  34235736 aaggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 34235910 - 34235852
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||||||||||||| ||||||||| | |||||| |||||| ||||||||||    
T  34235910 tgtttaattgcacttttgccccctatcttttttcaaattgttcgatttcgcaccccctc 34235852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 35080183 - 35080125
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||  |||||||||| |||||||  |||||||||||||||||||| ||||||    
T  35080183 tgttcaattgtgcttttgccccctatctttaagctaattgtgcgattttgcatcccctc 35080125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 42418589 - 42418639
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  42418589 aaggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 5349789 - 5349733
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| ||||||||||||||||   |||||||||||||  |||||||||||||||||||||    
T  5349789 acaatggcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 13772950 - 13772898
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| |||| |||| ||| |||||||||||||||||||||||||||    
T  13772950 aattgcacttttcccccctatcattt-gctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 18864456 - 18864404
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  18864456 aggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23686421 - 23686473
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||    
T  23686421 ggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 29292095 - 29292038
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||  || ||| ||||||| |||||||||||||| |||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctc 29292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 30857961 - 30857904
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||  | | ||||||||| ||||||||| ||||||||||||    
T  30857961 aaaggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacccc 30857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 34236030 - 34235977
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||| | |||||||  ||||||||||| ||||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttcccc-ctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 38191388 - 38191440
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||    
T  38191388 aattgcactttttcccct-atctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27096047 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27182256 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 42419079 - 42419028
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  42419079 ttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 5735382 - 5735429
Alignment:
Q  181 ttgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||    
T  5735382 ttgcactttttctccctatctttttgccaattgtgcgattttgcaccc 5735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 351
Target Start/End: Original strand, 5735382 - 5735429
Alignment:
Q  304 ttgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||| | || ||||||||||| ||||||||||||||||||||    
T  5735382 ttgcactttttctccctatctttttgccaattgtgcgattttgcaccc 5735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15567322 - 15567276
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  15567322 ttaattgcacttttcccccctatcttttgc---tagtgcgattttgcacc 15567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 8953721 - 8953779
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||||||||| ||| |||||||||   || |||||||||||||||||||||    
T  8953721 tgtttaattgcacttttgtcccctatctttttagcaaatgtgcgattttgcaccccctc 8953779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |  ||| |||||| |||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 38191387 - 38191440
Alignment:
Q  178 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||    
T  38191387 taattgcactttttcccc-tatctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 39983700 - 39983754
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||||| ||||||||   |||| |||||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcaccccc 39983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||| |||||||||||||   |||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 8953597 - 8953651
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    ||||||| |||||||||||||  ||||| |||||||| ||||| |||||||||||||    
T  8953597 acaaaggtttaattgcacttt--cccccgatcttttgacaattatgcgattttgcac 8953651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 15566989 - 15567046
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||| | ||| |  |||||| |||||||||||||||||||||    
T  15566989 aaaggcttaattgcatttttgctccccactttttgctaattgtgcgattttgcacccc 15567046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 352
Target Start/End: Original strand, 15567017 - 15567046
Alignment:
Q  323 ctttttgctaattgtgcgattttgcacccc 352  Q
    ||||||||||||||||||||||||||||||    
T  15567017 ctttttgctaattgtgcgattttgcacccc 15567046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 36527381 - 36527437
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  36527381 aaaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcacccc 36527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 38191259 - 38191312
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| |||||||||||||||| |  |||||||||| |||| ||||||||||||    
T  38191259 aaaggtttaattgcacttttcctctttatcttttgctaattatgcgattttgca 38191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 38191619 - 38191566
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||  |||||||||||||  |||| |||||||||||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 23686766 - 23686723
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttg 346  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||    
T  23686766 aattgcactttttccccctatctttt-gctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 353
Target Start/End: Complemental strand, 34236005 - 34235977
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccc 353  Q
    |||||||||||||||||||||||||||||    
T  34236005 ttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 101)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 41662457 - 41662400
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 41662400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 12281121 - 12281181
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12281121 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctc 12281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 765736 - 765791
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 15156116 - 15156062
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15156116 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 15156239 - 15156182
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctc 15156182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 37752237 - 37752290
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37752237 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9823417 - 9823361
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9823417 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 43246232 - 43246173
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43246232 aaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 12281247 - 12281301
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12281247 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 12281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 15155882 - 15155940
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 16928941 - 16928999
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctc 16928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 18019910 - 18019968
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18019910 tgttcaattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 39724102 - 39724048
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 13026634 - 13026687
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 16929296 - 16929239
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 37752470 - 37752413
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 41662334 - 41662281
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41662334 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttacacc 41662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 43245994 - 43246047
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43245994 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 43246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 9465695 - 9465751
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccc 353  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  9465695 tgttcaattgcacttttgccccctatctttttgctaactgtgcgattttgcaccccc 9465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 765739 - 765832
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  765739 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 41662452 - 41662359
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  41662452 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccct 41662359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 43162468 - 43162417
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43162468 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 43162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 43245876 - 43245969
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  43245876 aattgcactttttccccctatctttt-gataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccct 43245969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 765857 - 765911
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  765857 tgttcaattgcacttttgccccttatctttttgctaaccgtgcgattttgcaccc 765911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 22851390 - 22851444
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 34313995 - 34313941
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34313995 tgttcaattgcacttttgtcccttatctttttgctaattgtacgattttgcaccc 34313941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 12281480 - 12281423
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 43245871 - 43245928
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctc 43245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 13936721 - 13936776
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  13936721 aaggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 12281129 - 12281222
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||||    
T  12281129 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgccccct 12281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 13937444 - 13937389
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  13937444 aggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 34498610 - 34498555
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 37396707 - 37396762
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  37396707 aggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 41662518 - 41662573
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  41662518 aaaggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9822748 - 9822802
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 37397199 - 37397145
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 24473825 - 24473768
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  24473825 aaaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 33748217 - 33748157
Alignment:
Q  297 tgttcaattgcacttttgccccttatcttttt--gctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||||||||||||||    
T  33748217 tgttcaattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccccctc 33748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 16929067 - 16929115
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  16929067 aattgcacttttgccccttatctttttgttaattgtgagattttgcacc 16929115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 7127882 - 7127827
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    ||||||||||||||||| |||| ||||||||||||||||| | |||||||||||||    
T  7127882 tgttcaattgcacttttaccccctatctttttgctaattgcgtgattttgcacccc 7127827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 15156234 - 15156141
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| ||||||||  | ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  15156234 aattgcacttttcccccctatcttttgtc-aattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccct 15156141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 41662105 - 41662164
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||| |||| |||||||||  ||||||||||||||||||||||||    
T  41662105 aaggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 24473343 - 24473397
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 34313765 - 34313820
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  34313765 ggcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctc 34313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 12281475 - 12281423
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  12281475 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  179 aattgcacttttcccccctatcttttgcc-aattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 23123572 - 23123514
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||| ||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  23123572 aaagacttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  43162588 taattgcacttttccccc-tatcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 75011 - 74941
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  75011 ttttgctaattgtgcgattttgcaccccctcttttttttt-agcgattttgcaccccatctttttgccccct 74941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 15442765 - 15442817
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcacccc 15442817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 18020142 - 18020085
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||  |||||||||  ||||||||||||||||||||||||    
T  18020142 aaggcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctc 18020085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 20861694 - 20861638
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| ||||||||  | |||||||||||||||||||||||||    
T  20861694 aaggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcacccc 20861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 2856525 - 2856580
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||| | |||||| ||||||  |||||||||||||||||||||||||||    
T  2856525 aggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcacccc 2856580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 6199151 - 6199100
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  6199151 aggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgca 6199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 15155888 - 15155973
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  15155888 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 15155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 15444698 - 15444647
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcacccc 15444647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 17431284 - 17431339
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||||| ||||    
T  17431284 aaaggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacc 17431339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||| | |||||  |||||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 34498125 - 34498176
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 34498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9623502 - 9623556
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| | | ||||  |||||||||||||||||||||||||||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcacccc 9623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 16928947 - 16929038
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||  |||| |||||||| |||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||    
T  16928947 aattgcactttccccccctatctttt-gctaattgtgcgattttgcaccccctc-ttttttttgagcg-ttttgcaccccatctttttgccccct 16929038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 22786933 - 22786987
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||| ||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  22786933 tgtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccc 22786987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 23123564 - 23123514
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  23123564 aattgcacttt--ccccttatctttt-gctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 6092775 - 6092825
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||| |||  |||||||||||||| ||||||||||||||||||    
T  6092775 aaggcttaattgcatttt--ccccctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  7127660 ttgcacttttcccc-ctatcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 11007654 - 11007707
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    |||| |||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  11007654 tgtttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 16929291 - 16929239
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||||||    
T  16929291 aattgcacttttctcccctatctttt-gctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 37752465 - 37752413
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  37752465 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||    
T  43162234 ggcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 43246225 - 43246173
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||||||||    
T  43246225 aattgcacttttcccccctatctttt-gctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 74916 - 74864
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||| ||||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  74916 tgtttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 43597913 - 43597957
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcga 341  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||    
T  43597913 tgttcaattgtgcttttgccccctatctttttgctaattgtgcga 43597957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 75016 - 74981
Alignment:
Q  196 ctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| ||||||||||||||||||||||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctc 74981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 9465700 - 9465751
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcaccccc 9465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 365 - 396
Target Start/End: Original strand, 37752181 - 37752212
Alignment:
Q  365 gagcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||||||||||    
T  37752181 gagcgattttgcaccccatctttttgccccct 37752212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 3463874 - 3463817
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| |||||||| ||| ||||| |||||||||| ||||||||||||||| ||||||||    
T  3463874 tgtttaattgcacatttacccct-atctttttgccaattgtgcgattttgtaccccctc 3463817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6198657 - 6198711
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  6198657 aggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccc 6198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 9465604 - 9465653
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgatttt 221  Q
    |||||||||||||||||||| || ||||||||||| ||||||||| |||||    
T  9465604 aaaggcttaattgcactttt-cctcctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 11007657 - 11007707
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  11007657 ttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 37670186 - 37670128
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||| |||||  || ||| ||||||||||||||| ||||||||||||||||    
T  37670186 tgtttaattgcatttttgtaccatatttttttgctaattgtgtgattttgcaccccctc 37670128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 37752089 - 37752138
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||||||||||    
T  37752089 aattgcacttttcccccctatgtttt-gctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  193 cccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||| ||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 74913 - 74864
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    ||||||||||||||  |||||||||||| | |||||||||||||||||||    
T  74913 ttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 9465908 - 9465871
Alignment:
Q  194 ccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctc 9465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 11007885 - 11007828
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||  | |||||||| ||||||||| |||||||| ||||    
T  11007885 aaaggcttaattgcactttcccttcttatcttttaccaattgtgagattttgctcccc 11007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 33748212 - 33748157
Alignment:
Q  179 aattgcacttttcccccctatctttt---gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| |||||||| ||||   || ||||||||||||||||||||||||    
T  33748212 aattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccccctc 33748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 39723415 - 39723452
Alignment:
Q  187 ttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgca 39723452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 41662112 - 41662164
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||| ||| |||| |||||||| | |||||||||||||||||||||||||    
T  41662112 aattgcacattttccccatatctttt-gttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 25439181 - 25439126
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  25439181 aaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcacccc 25439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 56; Significance: 4e-23; HSPs: 6)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 6392 - 6451
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6392 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 6628 - 6575
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6628 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 6745 - 6653
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  6745 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 6750 - 6694
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  6750 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 6694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 6399 - 6451
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  6399 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 25425 - 25366
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 25366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 25300 - 25247
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25300 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 25418 - 25327
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgcccc 394  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  25418 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 25327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 56505692 - 56505747
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 13198963 - 13198903
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  13198963 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 16555866 - 16555773
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||    
T  16555866 aattgcacttttcccccttatctttt-gctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccct 16555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 50678778 - 50678833
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 11241621 - 11241567
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11241621 tgttcaatttcacttttgccccttatctttttgctaattgtgcgattttgcaccc 11241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 16555748 - 16555695
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16555748 tgttcaattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 24775840 - 24775783
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  24775840 aaaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 27304947 - 27304890
Alignment:
Q  298 gttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  27304947 gttcaattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 36095814 - 36095871
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36095814 aaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 22681702 - 22681754
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22681702 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 22681754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 28196829 - 28196773
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196829 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 18077258 - 18077199
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  18077258 aaggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 28196345 - 28196400
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196345 aggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 49178639 - 49178694
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  49178639 tgttcaattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 3930407 - 3930357
Alignment:
Q  301 caattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3930407 caattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 3930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 3930534 - 3930477
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3930534 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 3930477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 13198727 - 13198781
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  13198727 tgttcaattgcacttttgtcccttatcttttttctaattgtgcgattttgcaccc 13198781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 16555514 - 16555572
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  16555514 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 16555871 - 16555817
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcacccc 16555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 32703704 - 32703650
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  175 gcttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 26207803 - 26207746
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  26207803 aaaggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 32703222 - 32703279
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  32703222 aaaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9023736 - 9023680
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  9023736 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 9380796 - 9380744
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  22681576 gcttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 35393599 - 35393651
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  35393599 tgttcaattgaacttttgccccctatctttttgctaattgtgcgattttgcac 35393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 43051308 - 43051252
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  43051308 aaggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 3930528 - 3930436
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  3930528 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccct 3930436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 5206190 - 5206100
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatcttt 387  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||         |||||||||||||||| ||||||    
T  5206190 tgttcaattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctctttttttctgagcgattttgcaccctatcttt 5206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 9023243 - 9023298
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 39744520 - 39744465
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 169010 - 169068
Alignment:
Q  171 aaaggcttaattgcacttttc-ccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  169010 aaaggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 8488307 - 8488361
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  8488307 tgttcaattgcacttttgccccctatgtttttgctaattgtgcaattttgcaccc 8488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 13198606 - 13198660
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctc 13198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 293274 - 293217
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  293274 aaaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 8181996 - 8182049
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  8181996 aattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 26207359 - 26207414
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  26207359 aaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 35393832 - 35393773
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||    
T  35393832 aaaggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctc 35393773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 43050605 - 43050661
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  43050605 aaggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 54508812 - 54508868
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||| || || ||||||||||||||||| ||||||||||||    
T  54508812 aaaggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccc 54508868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 292781 - 292832
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  292781 aggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgca 292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 11241715 - 11241661
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  11241715 aggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 25225454 - 25225399
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  25225454 aaggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 45830251 - 45830196
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 169493 - 169439
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8182229 - 8182171
Alignment:
Q  172 aaggcttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  8182229 aaggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 11241389 - 11241446
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||| ||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 13198603 - 13198702
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnn-gagcgattttgcaccccatctttttgccccc 395  Q
    |||| ||||||||||||  || ||||||||| || ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  13198603 tgtttaattgcacttttctcctttatctttt-gccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccc 13198701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 16555520 - 16555572
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  16555520 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 22681934 - 22681881
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||| |||||||||||  |||||||| ||||||||||    
T  22681934 aggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 23540306 - 23540253
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 56506629 - 56506580
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  56506629 aggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 23539840 - 23539893
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  23539840 aggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 39086677 - 39086625
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 45828991 - 45829047
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||||| ||||    
T  45828991 aaaggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtaccc 45829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 5205987 - 5206042
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||  ||||  |||||||||||||||    
T  5205987 aggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 8182222 - 8182171
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccc 353  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  8182222 aattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 13198955 - 13198870
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  13198955 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 13198870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 39744029 - 39744084
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||  ||| |||||||||||||||| ||||||    
T  39744029 aggcttaattgcactttttccccctatagtttaccaattgtgcgattttccacccc 39744084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 351
Target Start/End: Complemental strand, 5206278 - 5206231
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  5206278 aattgcacttttcccccttatcttttt--taattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 8488530 - 8488447
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  8488530 aattgcactttt-cgccttatcttttt-ctaattgtgcgattttgcaccccctc-ttttttttgagcgattttgcaccccatctttt 8488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 18077251 - 18077167
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatcttt 387  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||    
T  18077251 aattgcacttttcacccctat-tttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  27304718 ggcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43292411 - 43292361
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgca 43292361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 5206283 - 5206231
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 43292038 - 43292091
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  |||||||  |||| ||||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcacccc 43292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 47219252 - 47219203
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||| ||||| || ||||||||||| |||||||||||||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7603477 - 7603422
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||| ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  7603477 acaatggcttaattgcactttttcccc-tatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8488534 - 8488479
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||  |||||||| | ||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctc 8488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 39415580 - 39415528
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||    
T  39415580 aaggcttaactgcactttttccctctatcttttgctaattgtgcaattttgca 39415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 48405960 - 48406015
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||    
T  48405960 aaggcttaattgcactttt-ccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 48406425 - 48406386
Alignment:
Q  188 tttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 24775641 - 24775695
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||| ||||||||||||||||| ||| ||||||  ||||||||||||||| ||||    
T  24775641 tgtttaattgcacttttgccccctatatttttgtcaattgtgcgattttgtaccc 24775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 56505698 - 56505747
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  56505698 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 3930179 - 3930235
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| |||| ||||||||   |||| |||||||||||||||||||    
T  3930179 ggcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 5206185 - 5206132
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||| |||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctc 5206132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 7603146 - 7603200
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||  ||||||||   |||||||| |||||||||||||||    
T  7603146 gcttaattgcacttttcccc--tatctttttttaattgtgcaattttgcaccccctc 7603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 8488185 - 8488242
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||   || |||||||||  |||||||||||||||||||||    
T  8488185 aaaggcttaattgcattttttttccatatcttttgttaattgtgcgattttgcacccc 8488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 11241394 - 11241446
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| | ||||||||||| | |||||||||||||||||| ||||||    
T  11241394 aattgcacttttcctccttatctttt-gttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21871356 - 21871315
Alignment:
Q  163 aattttacaaaggcttaattgcacttttcccccctatctttt 204  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  21871356 aattttaaaaaggcttaattgcacttttggcccctatctttt 21871315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21927217 - 21927176
Alignment:
Q  163 aattttacaaaggcttaattgcacttttcccccctatctttt 204  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  21927217 aattttaaaaaggcttaattgcacttttggcccctatctttt 21927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 39415244 - 39415277
Alignment:
Q  194 ccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccc 39415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 49178533 - 49178574
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgc 215  Q
    |||||||||||||||||| ||| |||||||||| ||||||||    
T  49178533 ggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 49178865 - 49178813
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||  ||| |||||||| || ||||||||||||||||||||||||    
T  49178865 aattgcacttttctcccctatctttt-gccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 7603348 - 7603296
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||| |||||||||||||| || ||||||||| | || |||||||||||||||    
T  7603348 tgtttaattgcacttttgctccctatctttttaccaaatgtgcgattttgcac 7603296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 23432475 - 23432531
Alignment:
Q  173 aggcttaattgcacttttccccccta-tcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||| | ||||| ||||||||| ||| ||||||||    
T  23432475 aggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcacccc 23432531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 54509050 - 54508997
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||| |||||||||||||||||  ||| |||||| |||||||||||||||| ||||    
T  54509050 tgtttaattgcacttttgcccc--atcattttgccaattgtgcgattttgctcccc 54508997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 54509156 - 54509116
Alignment:
Q  187 ttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||| |||||||| |||||| ||||||||||||||||||||    
T  54509156 tttttccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 1351 - 1297
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1351 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 1474 - 1417
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctc 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 1469 - 1376
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  1469 aattgcactttttccccctatctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 1123 - 1208
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  1123 aattgcactttttccccctatctttt-gttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 2762606 - 2762664
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2762606 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 3404044 - 3403986
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 3403986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 10039898 - 10039840
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10039898 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 3403920 - 3403867
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403920 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 30388295 - 30388242
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30388295 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 18241851 - 18241911
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18241851 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 3404038 - 3403945
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  3404038 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 3403945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 33829691 - 33829636
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 18242087 - 18242033
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18242087 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 18242033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 33828990 - 33829044
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 33972244 - 33972190
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  33972244 tgttcaattgcacttttgccccatatctttttgctaattgtgagattttgcaccc 33972190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 11656603 - 11656660
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccct 354  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  11656603 tgttcaattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 11656836 - 11656779
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctc 11656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 7654604 - 7654548
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  7654604 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 21031976 - 21032035
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  21031976 aaaggcttaattgcacttttccccc-taacttttgctaattgtgcgattttgcaccccctc 21032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 21032005 - 21032076
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  21032005 ttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 21032076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 10039675 - 10039729
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10039675 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 21032335 - 21032285
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  21032335 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 33974353 - 33974299
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 18242210 - 18242153
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctc 18242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 30388413 - 30388360
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct 30388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 13579583 - 13579527
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccc 353  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  13579583 tgttcaattgcacttttgccccctatatttttgctaattgtgcaattctgcaccccc 13579527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 18242183 - 18242112
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  18242183 ttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 18242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 13579705 - 13579648
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||    
T  13579705 aggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 30388062 - 30388111
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  30388062 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 33658563 - 33658617
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||| |||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  33658563 tgtttaattgcacttttgccctttatctttttgccaattgtgcaattttgcaccc 33658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 396
Target Start/End: Original strand, 2762509 - 2762581
Alignment:
Q  324 tttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||||||||||         ||| ||||||||||| ||||||||||||||||    
T  2762509 tttttgctaattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatctttttgccccct 2762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29074428 - 29074372
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29074428 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29079192 - 29079136
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29079192 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29107001 - 29106945
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29107001 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 11656809 - 11656746
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  11656809 ttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  179 aattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 23250589 - 23250648
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||    
T  23250589 aaaggcttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 18241859 - 18241944
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  18241859 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 18241944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  181 ttgcacttttcccccctatctt-ttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  304 ttgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 30388411 - 30388320
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    ||||| |||||| |||| |||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||| ||||||    
T  30388411 aattgtactttttccccctatctttt-gctaattgtgcgattttgcaccccct--ttttttttgagcgattttgcaccccatctttttaccccct 30388320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 32734047 - 32734000
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 32734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 3403722 - 3403771
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  3403722 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 2354867 - 2354810
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||  ||||  |||| ||||||||||||||||||||||    
T  2354867 aaaggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcacccc 2354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatctttt-gttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 33655170 - 33655114
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||| |||||  |||||||||| |||||||| |||||||||||||    
T  33655170 aaggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 31598783 - 31598732
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  31598783 aaggtttaattgcacttttccccc-tatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 31598200 - 31598157
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgatttt 345  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||    
T  31598200 aattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 31598328 - 31598274
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| | ||||||| | |||||||||| ||||||||||||||||||||    
T  31598328 aaggcttaattgtatttttccctc-tatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 31598684 - 31598641
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgatttt 345  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||    
T  31598684 aattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Original strand, 3825553 - 3825583
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||||||||||||    
T  3825553 ttttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 10039681 - 10039729
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  10039681 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 22684411 - 22684358
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 22754657 - 22754710
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 355
Target Start/End: Complemental strand, 13579677 - 13579648
Alignment:
Q  326 tttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||||||||||||||||    
T  13579677 tttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 33971994 - 33972050
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| |||| |||| |||||||||  |||||| |||||||||||||||||    
T  33971994 ggcttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctc 33972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 2762500 - 2762540
Alignment:
Q  191 cccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||| || |||||| ||||||||||||||||||||||||    
T  2762500 ccccccaattttttgctaattgtgcgattttgcaccccctc 2762540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 31598201 - 31598157
Alignment:
Q  178 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 221  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598201 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 31598685 - 31598641
Alignment:
Q  178 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 221  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598685 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 10293730 - 10293784
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10293730 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 10293784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 20968951 - 20968897
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20968951 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 10293963 - 10293906
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 18875012 - 18875065
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18875012 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 9026855 - 9026907
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9026855 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 20968715 - 20968775
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  20968715 aaaggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 48159896 - 48159951
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 47871178 - 47871121
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  47871178 aaaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 18875245 - 18875188
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctc 18875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 53687886 - 53687942
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  53687886 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 18875240 - 18875155
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||         ||||||||||||||||||||||||    
T  18875240 aattgcacttttgccccctatctttt-gctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 40849016 - 40848961
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 18874881 - 18874935
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18874881 aggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 45060926 - 45060872
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  45060926 aggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 48160387 - 48160333
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 10293608 - 10293665
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctc 10293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 17372298 - 17372354
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccct 17372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 53766636 - 53766580
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||    
T  53766636 aaaggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1928484 ttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 4947384 - 4947439
Alignment:
Q  300 tcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  4947384 tcaattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 13657676 - 13657621
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  13657676 tgtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 1101144 - 1101087
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  1101144 tgtttaattgcacttttgcccct-atctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 8315136 - 8315083
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  8315136 aggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 17372528 - 17372470
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||| |||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  17372528 tgtttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctc 17372470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 27238464 - 27238518
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||    
T  27238464 aggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 42455789 - 42455839
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 45060826 - 45060769
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||    
T  45060826 tgttcaattgcacttttgcccct-atctttttgccaattgttcgattttgcacctcctc 45060769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 10293642 - 10293706
Alignment:
Q  332 aattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  10293642 aattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 10293706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26007179 - 26007235
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  26007179 aaaggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 14015923 - 14015867
Alignment:
Q  177 ttaattgcactttt-cccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 21895656 - 21895712
Alignment:
Q  173 aggcttaattgcacttttccccc-ctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  21895656 aggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 40848519 - 40848574
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  40848519 aaggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 1100917 - 1100968
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 3644775 - 3644720
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||| ||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  3644775 tgtttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 10293958 - 10293873
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  10293958 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatctttt 10293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 14015926 - 14015867
Alignment:
Q  297 tgttcaattgcacttttgcccct-tatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| |||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  14015926 tgtttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 17372525 - 17372470
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    ||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  17372525 ttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctc 17372470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 18874885 - 18874935
Alignment:
Q  300 tcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  18874885 tcaattgcactttttccccctatctttt-gctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 20969068 - 20968976
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||| |          ||||||||||||||||||||||||||||||||    
T  20969068 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccctt-tttttttttgagcgattttgcaccccatctttttgccccct 20968976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 1101236 - 1101182
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  1101236 aggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 3644837 - 3644783
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 10348853 - 10348799
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || | |||  |||||||||||||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcacccc 10348799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 24485513 - 24485460
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  24485513 ggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 42673349 - 42673296
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  42673349 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 4947386 - 4947439
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||    
T  4947386 aattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 17441119 - 17441066
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||| |||||| | ||||||||||  ||||||||||||||||||    
T  17441119 aaggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 47665910 - 47665963
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| |||| |||  |||| ||||||||||||||||||||    
T  47665910 aggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 17372303 - 17372354
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccct 354  Q
    |||||||| ||| |||| ||| |||||||||||||||||||||||||||||||    
T  17372303 aattgcaccttttccccctat-tttttgctaattgtgcgattttgcaccccct 17372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 26007670 - 26007622
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||| ||||||||  |||||||||||| |||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcac 26007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 9026860 - 9026907
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcac 225  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 13657445 - 13657500
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||| |||||||| |||   | |||||||||||||||||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcaccccc 13657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||  || |||||||||| |||||||||||||||||||||    
T  14016014 ttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 20968723 - 20968808
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||| ||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  20968723 aattgcacctttcccccctatctttt-gttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 20968808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 23630086 - 23630035
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| || ||||| |||||  |||||||||||||||||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 36181045 - 36180990
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||  ||||  ||||||||||||||| |||||    
T  36181045 aggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 47870811 - 47870877
Alignment:
Q  162 taattttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcg-attttgcacccc 228  Q
    |||||||| | ||||||||||||||||||  |||||||||||||| |||| |||| ||||||||||||    
T  47870811 taattttaaataggcttaattgcactttt-tcccctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 47871170 - 47871121
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccc 353  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  47871170 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 53688356 - 53688306
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||| | |||||||  ||||||||||||||||||||||||    
T  53688356 ggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 53766166 - 53766217
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| || |||||  |||| ||||||||||||||||||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcacccc 53766217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 3644832 - 3644783
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    ||||||| |||| |||||||| |||||| ||||||||||||||||||||||    
T  3644832 aattgcatttttcccccttat-tttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  9027086 ggcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||  ||| |||| | |||||||||||||||||||||    
T  17372645 gcttaattgcacttttcccc--tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 17440880 - 17440934
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||| ||||||| ||||||||| ||| ||||||| ||||||||||||||| ||||    
T  17440880 tgtttaattgcatttttgccccatatatttttgccaattgtgcgattttgaaccc 17440934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 18874957 - 18874987
Alignment:
Q  366 agcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||||||||||||||||||||||    
T  18874957 agcgattttgcaccccatctttttgccccct 18874987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||| ||| ||||| ||||||||| |||||||||||||||    
T  26540694 ttaattgcacttttgcccc-tattttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  42627599 ggcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||    
T  3353597 ttgcacttttccccc-tatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 47871049 - 47871005
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgc 347  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||    
T  47871049 aattacacttttgcccct-atctttttgccaattgtgcgattttgc 47871005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  177 ttaattgcacttttcccccctatctt-ttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 22429647 - 22429596
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| |||||  |||| ||||||||||||||||||||||    
T  22429647 cttaattgcacttt-ccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 7e-22; HSPs: 9)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 438930 - 438987
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 439021 - 439072
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  439021 tgttcaattgcacttttgccccttatctttttgctaattgtgcaattttgca 439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 183719 - 183660
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  183719 aaaggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 438935 - 439019
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatcttt 387  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||    
T  438935 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttt 439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 439254 - 439196
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||    
T  439254 aggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc 439196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 439248 - 439165
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||         ||||||||||||||||||||||||    
T  439248 aattgcactttttccccttatctttt-gctaattgtgcgattttgcatcccctc--tttttttgagcgattttgcaccccatctttt 439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 183595 - 183544
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    |||| ||||||||||||||||| ||||||||| | |||||||||||||||||    
T  183595 tgtttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  183367 ttaattgcacttttcccc-ctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 183592 - 183544
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgca 224  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  183592 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 18433138 - 18433191
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18433138 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 25115756 - 25115813
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25115813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 25174848 - 25174905
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 18433373 - 18433313
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18433373 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18433313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 18433015 - 18433069
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 18433069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 25115880 - 25115934
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25115880 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 25174972 - 25175026
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25174972 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 25175206 - 25175148
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 25116116 - 25116060
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 26020448 - 26020504
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26020448 aaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacccc 26020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 34576988 - 34577040
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34576988 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 12498566 - 12498621
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 12498983 - 12498928
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498983 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 18433020 - 18433113
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||    
T  18433020 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccct 18433113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 18816951 - 18817006
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 26571219 - 26571164
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 19515020 - 19514963
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  19515020 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 26020573 - 26020625
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 349  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  26020573 tgttcaattgcacttttgtcccttatctttttgttaattgtgcgattttgcac 26020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 16466797 - 16466746
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  180 attgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 22428933 - 22428987
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  22428933 aggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 5187645 - 5187703
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  5187645 tgttcaattgcacttttgtcccctatctttttgctaattatgcgattttgtaccccctc 5187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 33324893 - 33324835
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  33324893 aggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 11350805 - 11350861
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  11350805 aaaggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 5779793 - 5779742
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  5779793 tgttcaattgcacttttgtctcctatctttttgctaattgtgcgattttgca 5779742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 22429250 - 22429196
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  22429250 aggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 25115762 - 25115855
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||    
T  25115762 aattgcacttttcccccctatctttt-gccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 25174854 - 25174947
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| |||| |||||||| || ||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||    
T  25174854 aattgcacttttcccccctatctttt-gccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25174947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 26020455 - 26020548
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| | || |||||||| |||||||||||||||||||||||| ||         ||||||||||||||| ||||||||||||||||    
T  26020455 aattgcacttttcctccctatctttt-gctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccct 26020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 26570728 - 26570783
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||    
T  26570728 aggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcacccc 26570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 34147567 - 34147512
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  34147567 aaaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3888239 - 3888293
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcacccc 3888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 9869793 - 9869735
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  9869793 tgtttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctc 9869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 2817146 - 2817199
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  2817146 aaaggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 2817199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 5187885 - 5187828
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||    
T  5187885 aggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 37610199 - 37610255
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  37610199 aaaggcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 37780317 - 37780373
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  37780317 aaaggcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 41383223 - 41383167
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41383223 aaaggcttaattgaacttttccccc-tattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 5187879 - 5187828
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccct 354  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  5187879 aattgcacttttgccccttatc-ttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 37780796 - 37780744
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 9869790 - 9869735
Alignment:
Q  177 ttaattgcacttttcccccctatcttttg-ccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  9869790 ttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctc 9869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 19514525 - 19514580
Alignment:
Q  174 ggcttaattgcacttttcccccc-tatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 25175200 - 25175115
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  25175200 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatctttt 25175115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 34576870 - 34576920
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  34576870 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttacacccc 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 9665649 - 9665707
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||| |||| ||||||    
T  9665649 tgttcaattgtgtttttgccccctatctttttgctaattgtgcgattctgcatcccctc 9665707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 12441245 - 12441187
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||||||||| || |||||    
T  12441245 tgtttaattgcacttttgccccctatctttttgtcaattgtgcgattttgtactccctc 12441187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 18433365 - 18433281
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttt 388  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  18433365 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccctc-ttttttttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 34577217 - 34577164
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3888719 - 3888662
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| ||||||||||||||||| | |||  |||||||||||| ||||||||||||||    
T  3888719 aaaggtttaattgcacttttccctcttataatttgccaattgtacgattttgcacccc 3888662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 9869557 - 9869611
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||| |||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  9869557 aaaggtttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23011079 - 23011131
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  23011079 ggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 43463753 - 43463809
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| ||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  43463753 aaaggtttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 43464246 - 43464194
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  43464246 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  303 attgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatctttt-gccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23011309 - 23011261
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 224  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23011309 ttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 25940518 - 25940574
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  25940518 aaaggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccc 25940574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 12441242 - 12441187
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||| || |||||    
T  12441242 ttaattgcacttttgccccctatctttttgtcaattgtgcgattttgtactccctc 12441187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 220  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  12441364 ggcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 23011312 - 23011261
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 348  Q
    |||| ||||||| ||||||||| |||||||| || |||||||||||||||||    
T  23011312 tgtttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 25116110 - 25116060
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccc 353  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||||    
T  25116110 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 365 - 396
Target Start/End: Original strand, 34576932 - 34576963
Alignment:
Q  365 gagcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||||||||||    
T  34576932 gagcgattttgcaccccatctttttgccccct 34576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 10098519 - 10098569
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||| || |||||  |||| ||||||||||||||||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgca 10098569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 5187548 - 5187605
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||| ||  ||||||| |||||| ||| |||||||||||||||||    
T  5187548 aaaggcttaattgtactcttttcccctattttttgctaatcgtgcgattttgcacccc 5187605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 9665879 - 9665828
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  9665879 ggcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 22429210 - 22429181
Alignment:
Q  367 gcgattttgcaccccatctttttgccccct 396  Q
    ||||||||||||||||||||||||||||||    
T  22429210 gcgattttgcaccccatctttttgccccct 22429181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 23011091 - 23011131
Alignment:
Q  310 ttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  23011091 tttttccccttatctttt-gctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    |||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 11317030 - 11316974
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| ||||||||||||||  || || |  |||||||||||||||||||||||||||    
T  11317030 aaggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcacccc 11316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 34147132 - 34147193
Alignment:
Q  165 ttttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||||||||||||   |||  |||  ||||||||||||||||||||||    
T  34147132 ttttataaaggcttaattgcacttttccct--tatagtttatcaattgtgcgattttgcacccc 34147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 37610671 - 37610620
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||| ||||| |||||||||  ||||| |||||||||||||||||||    
T  37610671 ggcttaattgtacttt-cccccctatagtttgctaattgtgcgattttgcacc 37610620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 41383195 - 41383167
Alignment:
Q  324 tttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||||||||||||||||||||    
T  41383195 tttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 45738 - 45684
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45738 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 45684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 45861 - 45804
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45861 aggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctc 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 45855 - 45763
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctcnnnnnnnnngagcgattttgcaccccatctttttgccccct 396  Q
    |||||||||||| ||||| ||||||| || ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  45855 aattgcacttttccccct-atctttt-gccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 45763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 45535 - 45593
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  45535 aaggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 1604 - 1658
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  1604 tgttcaattgcacttttgtctcttatctttttgctaattgtgcgattttgcaccc 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 1511 - 1564
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||||||||||    
T  1511 ggcttaattgcactttttcctc-tatcttttgccaattgtgtgattttgcacccc 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||| ||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctc 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 10009 - 10062
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10009 aaaggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 38751 - 38695
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  38751 aaggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 412044 - 412090
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgatt 343  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  412044 tgttcaattgcacttttgccccctatctttttgctaattgtgcgatt 412090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 411923 - 411979
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcaccccctc 411979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 9903 - 9960
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||    
T  9903 aaggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 328 - 380
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  328 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 816 - 763
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcacccc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 205684 - 205743
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  205684 aaaggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctc 205743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Original strand, 205713 - 205743
Alignment:
Q  325 ttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||||||||||||||||||||||    
T  205713 ttttgctaattgtgcgattttgcaccccctc 205743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 6806 - 6751
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacccc 352  Q
    |||||||||||||||||||||||||| |||||||||||| |  |||||||||||||    
T  6806 tgttcaattgcacttttgccccttatttttttgctaattctatgattttgcacccc 6751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  6927 gcttaattgcacttt-cccccctatcttttgccaattgtgc-attttgcaccc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 50073 - 50127
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  50073 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 50127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||    
T  7653 ggcttaattgcactttttcccc-tatcttttgctaattgtgcgattttgtaccccctc 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 7453 - 7508
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||    
T  7453 aaggcttaattgcactttttcccc-tatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 7648 - 7597
Alignment:
Q  302 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccctc 355  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||    
T  7648 aattgcactttttcccct-atctttt-gctaattgtgcgattttgtaccccctc 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||    
T  17209 ggcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctc 17153  T

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Target: scaffold0015; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 16976 - 17030
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 351  Q
    |||||||||||||||||| ||| ||||||||  |||||||| |||||||||||||    
T  16976 tgttcaattgcacttttgtcccctatcttttctctaattgtacgattttgcaccc 17030  T

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Target: scaffold0015; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 16870 - 16908
Alignment:
Q  193 cccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  16870 cccctatcttttgctaattgtgcgattatgcaccccctc 16908  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 20098 - 20043
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||| ||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgcccccc 20043  T

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Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 19618 - 19674
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||  |||||||||||||||||||||||||||    
T  19618 aaaggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcacccc 19674  T

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Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 73086 - 73143
Alignment:
Q  297 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccccct 354  Q
    |||| ||||||||||||| ||| ||||||||||  || ||||||||||||||||||||    
T  73086 tgtttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccccct 73143  T

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Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 72967 - 73023
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| ||||||||  |||||||||| |||||||| |||||||||| ||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctc 73023  T

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Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 73089 - 73143
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccct 230  Q
    ||||||||||||||  |||||||||||| | ||| ||||||||||||||||||||    
T  73089 ttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccccct 73143  T

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