View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0700_low_8 (Length: 335)
Name: NF0700_low_8
Description: NF0700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0700_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 42906380 - 42906085
Alignment:
| Q |
11 |
ttatacttaccttttgacagaagtagcttgacattttaaagatgaataaataaacgtgaactcagtgcaacttcaacataattgtttctgttaaataaat |
110 |
Q |
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| T |
42906380 |
ttatacttaccttttgacagaagtagcttgacattttaaagatgaataaatcaacatgaactaagtgcaacttcaacataattgtttctgttaaataaat |
42906281 |
T |
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| Q |
111 |
cacgtctacaataatagtgaacaataggtaatgcaaaaattcagtctattgagaactcggtctagtaaaaagtacctaggaaaacactaacctctaactc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42906280 |
cacgtctacaataatagtgaacaataggtaatgcaaaaattcagtctattgagaactcggtctagtaaaaagtacctaggaaaacactaacctctaactc |
42906181 |
T |
|
| Q |
211 |
aaatgtattaacacatcctcaaagaataattgcactgcctcatgccctactacactatagtcatttagataaaatgcaaaaatattagaacccata |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42906180 |
aaatgtattaacacatcctcaaagaataattgcactgcctcatgccctactacactatagtcatttagataaaatgcaaaaatattagaacccata |
42906085 |
T |
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