View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0701_low_4 (Length: 543)

Name: NF0701_low_4
Description: NF0701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0701_low_4
NF0701_low_4
[»] chr8 (70 HSPs)
chr8 (165-328)||(26259165-26259334)
chr8 (322-456)||(26259007-26259139)
chr8 (15-62)||(9301626-9301673)
chr8 (10-62)||(38074381-38074433)
chr8 (10-61)||(23430014-23430065)
chr8 (12-62)||(11163373-11163423)
chr8 (13-61)||(9687598-9687646)
chr8 (13-61)||(12342698-12342746)
chr8 (13-61)||(14263652-14263700)
chr8 (13-61)||(15596452-15596500)
chr8 (13-61)||(26062815-26062863)
chr8 (13-61)||(33935144-33935192)
chr8 (13-61)||(34046959-34047007)
chr8 (13-61)||(36112025-36112073)
chr8 (13-61)||(38482876-38482924)
chr8 (13-60)||(9808059-9808106)
chr8 (11-61)||(3513463-3513513)
chr8 (13-59)||(9954757-9954803)
chr8 (13-46)||(12763542-12763575)
chr8 (16-61)||(21651830-21651875)
chr8 (13-46)||(33314652-33314685)
chr8 (13-46)||(36058340-36058373)
chr8 (12-61)||(41890629-41890678)
chr8 (13-61)||(10180478-10180526)
chr8 (13-61)||(13174037-13174085)
chr8 (13-61)||(13327887-13327935)
chr8 (13-61)||(14228406-14228454)
chr8 (13-61)||(18291571-18291619)
chr8 (13-61)||(18842637-18842685)
chr8 (10-62)||(29126007-29126059)
chr8 (13-61)||(32010168-32010216)
chr8 (13-61)||(34981937-34981985)
chr8 (13-61)||(35052161-35052209)
chr8 (13-61)||(35296152-35296200)
chr8 (13-61)||(38128631-38128679)
chr8 (13-61)||(40228403-40228451)
chr8 (13-61)||(43553147-43553195)
chr8 (130-165)||(3720905-3720940)
chr8 (13-44)||(4057396-4057427)
chr8 (130-165)||(11163491-11163526)
chr8 (13-60)||(23848641-23848688)
chr8 (13-44)||(27518814-27518845)
chr8 (15-61)||(7483852-7483898)
chr8 (12-62)||(8954782-8954832)
chr8 (13-46)||(2335541-2335574)
chr8 (13-58)||(2888555-2888600)
chr8 (13-46)||(6750723-6750756)
chr8 (13-46)||(6757514-6757547)
chr8 (13-46)||(11707584-11707617)
chr8 (13-46)||(15623710-15623743)
chr8 (13-46)||(15647498-15647531)
chr8 (13-46)||(16656808-16656841)
chr8 (13-46)||(16700992-16701025)
chr8 (130-163)||(17718482-17718515)
chr8 (130-171)||(25703805-25703846)
chr8 (130-171)||(25812976-25813017)
chr8 (13-61)||(167561-167609)
chr8 (130-162)||(3720660-3720692)
chr8 (13-61)||(8554100-8554148)
chr8 (17-61)||(11015948-11015992)
chr8 (13-61)||(12248854-12248902)
chr8 (13-61)||(17074666-17074714)
chr8 (13-61)||(17573556-17573604)
chr8 (130-166)||(23429885-23429921)
chr8 (13-61)||(23855665-23855713)
chr8 (127-163)||(31028633-31028669)
chr8 (13-61)||(35029655-35029702)
chr8 (13-61)||(38221920-38221968)
chr8 (13-61)||(39303600-39303648)
chr8 (20-60)||(42352853-42352893)
[»] chr7 (47 HSPs)
chr7 (12-62)||(46563209-46563259)
chr7 (10-61)||(30586763-30586814)
chr7 (12-62)||(26803516-26803566)
chr7 (13-61)||(31430667-31430715)
chr7 (10-61)||(3178035-3178086)
chr7 (12-62)||(8965986-8966036)
chr7 (11-61)||(32966136-32966186)
chr7 (12-62)||(35684260-35684310)
chr7 (13-61)||(12838165-12838213)
chr7 (13-61)||(17896610-17896658)
chr7 (13-61)||(26632267-26632315)
chr7 (13-61)||(33257989-33258037)
chr7 (11-46)||(22950920-22950955)
chr7 (14-61)||(33921861-33921908)
chr7 (14-61)||(44480229-44480276)
chr7 (129-171)||(3177901-3177943)
chr7 (15-61)||(8380679-8380725)
chr7 (15-61)||(8381936-8381982)
chr7 (13-46)||(18470415-18470448)
chr7 (13-46)||(20035156-20035189)
chr7 (13-46)||(20045567-20045600)
chr7 (13-46)||(32528430-32528463)
chr7 (13-61)||(5732160-5732208)
chr7 (13-61)||(7312725-7312773)
chr7 (13-61)||(26724032-26724080)
chr7 (13-61)||(29497621-29497669)
chr7 (10-46)||(33173912-33173948)
chr7 (13-61)||(36922347-36922395)
chr7 (465-525)||(40261512-40261572)
chr7 (14-46)||(41889419-41889451)
chr7 (130-162)||(48981611-48981643)
chr7 (14-61)||(7477285-7477332)
chr7 (130-165)||(8965883-8965918)
chr7 (13-60)||(38168877-38168924)
chr7 (130-169)||(46563354-46563393)
chr7 (130-164)||(8966131-8966165)
chr7 (15-61)||(33099922-33099968)
chr7 (19-61)||(47408227-47408269)
chr7 (13-46)||(36298276-36298309)
chr7 (16-61)||(36406862-36406907)
chr7 (128-164)||(13431360-13431396)
chr7 (13-61)||(28608702-28608750)
chr7 (13-61)||(30866823-30866871)
chr7 (13-61)||(36648092-36648140)
chr7 (13-61)||(37353957-37354005)
chr7 (13-61)||(41891378-41891426)
chr7 (13-61)||(44820684-44820732)
[»] chr5 (59 HSPs)
chr5 (12-60)||(25785996-25786044)
chr5 (13-61)||(4175561-4175609)
chr5 (13-61)||(25344050-25344098)
chr5 (12-62)||(18393051-18393101)
chr5 (461-525)||(294999-295063)
chr5 (13-61)||(4098421-4098469)
chr5 (13-61)||(7408421-7408469)
chr5 (13-61)||(8825147-8825195)
chr5 (13-61)||(9076161-9076209)
chr5 (13-61)||(12664948-12664996)
chr5 (13-61)||(16124341-16124389)
chr5 (13-61)||(28463466-28463514)
chr5 (13-61)||(34261402-34261450)
chr5 (17-61)||(39073138-39073182)
chr5 (13-48)||(38502894-38502929)
chr5 (12-58)||(4609113-4609159)
chr5 (12-62)||(11413610-11413660)
chr5 (12-62)||(18676495-18676545)
chr5 (13-46)||(1088029-1088062)
chr5 (16-61)||(4017507-4017552)
chr5 (16-61)||(7579749-7579794)
chr5 (13-46)||(37303203-37303236)
chr5 (13-61)||(4427487-4427535)
chr5 (10-46)||(4688894-4688930)
chr5 (13-61)||(4694854-4694902)
chr5 (13-61)||(4985256-4985304)
chr5 (13-61)||(6072542-6072590)
chr5 (13-61)||(6754260-6754308)
chr5 (13-61)||(18020849-18020897)
chr5 (13-61)||(18437404-18437452)
chr5 (13-61)||(18794873-18794921)
chr5 (13-61)||(22582562-22582610)
chr5 (13-61)||(24229038-24229086)
chr5 (13-61)||(38017358-38017406)
chr5 (14-46)||(38363280-38363312)
chr5 (14-61)||(1297819-1297866)
chr5 (13-60)||(5144080-5144127)
chr5 (10-61)||(8849218-8849271)
chr5 (10-60)||(32439994-32440044)
chr5 (13-62)||(3243886-3243935)
chr5 (20-61)||(7403949-7403990)
chr5 (13-46)||(8229899-8229932)
chr5 (16-61)||(14793871-14793916)
chr5 (12-61)||(21150581-21150630)
chr5 (12-61)||(21157722-21157771)
chr5 (13-46)||(24074934-24074967)
chr5 (13-61)||(2133987-2134035)
chr5 (14-46)||(2674074-2674106)
chr5 (130-162)||(4609232-4609264)
chr5 (13-61)||(5119268-5119316)
chr5 (13-61)||(9127432-9127480)
chr5 (13-61)||(12869980-12870028)
chr5 (130-162)||(13703304-13703336)
chr5 (130-162)||(21157840-21157872)
chr5 (13-61)||(26854176-26854223)
chr5 (13-61)||(28024340-28024388)
chr5 (13-61)||(36239548-36239596)
chr5 (13-61)||(38702231-38702279)
chr5 (13-61)||(40198878-40198926)
[»] chr4 (79 HSPs)
chr4 (10-62)||(1180985-1181037)
chr4 (14-62)||(1615139-1615187)
chr4 (13-61)||(13629278-13629326)
chr4 (13-61)||(44217817-44217865)
chr4 (12-59)||(1146136-1146183)
chr4 (10-61)||(16464867-16464918)
chr4 (10-61)||(34925427-34925478)
chr4 (12-61)||(38866013-38866062)
chr4 (13-61)||(35232383-35232431)
chr4 (14-62)||(43086515-43086563)
chr4 (13-61)||(44069142-44069190)
chr4 (13-61)||(52677230-52677278)
chr4 (13-60)||(29295465-29295512)
chr4 (13-60)||(35381501-35381548)
chr4 (10-61)||(39671433-39671484)
chr4 (11-46)||(39683814-39683849)
chr4 (127-165)||(1180882-1180920)
chr4 (12-62)||(6150804-6150854)
chr4 (15-61)||(33755116-33755162)
chr4 (130-168)||(33809064-33809102)
chr4 (12-62)||(54029208-54029258)
chr4 (13-46)||(5374450-5374483)
chr4 (16-62)||(20294398-20294446)
chr4 (13-61)||(354077-354125)
chr4 (13-61)||(3436152-3436200)
chr4 (12-60)||(3802270-3802318)
chr4 (13-61)||(16664352-16664400)
chr4 (13-61)||(19093238-19093286)
chr4 (13-61)||(22678394-22678442)
chr4 (13-61)||(38617392-38617440)
chr4 (10-62)||(39309039-39309091)
chr4 (128-164)||(43887964-43888000)
chr4 (13-61)||(46872032-46872080)
chr4 (13-61)||(53599871-53599919)
chr4 (130-165)||(1391152-1391187)
chr4 (13-60)||(8741710-8741757)
chr4 (13-44)||(26906491-26906522)
chr4 (13-60)||(44176675-44176722)
chr4 (13-60)||(47251524-47251571)
chr4 (14-61)||(52978311-52978358)
chr4 (128-163)||(53691881-53691916)
chr4 (10-52)||(37551759-37551801)
chr4 (14-60)||(44549755-44549801)
chr4 (12-46)||(47885088-47885122)
chr4 (12-46)||(56499712-56499746)
chr4 (130-163)||(1181131-1181164)
chr4 (13-46)||(8735500-8735533)
chr4 (13-46)||(9834375-9834408)
chr4 (11-44)||(13435263-13435296)
chr4 (12-61)||(18135136-18135185)
chr4 (20-61)||(23237748-23237789)
chr4 (10-43)||(26933874-26933907)
chr4 (13-46)||(27492471-27492504)
chr4 (130-163)||(37551894-37551927)
chr4 (13-46)||(41415118-41415151)
chr4 (13-46)||(47751641-47751674)
chr4 (12-61)||(49122346-49122395)
chr4 (13-46)||(55147161-55147194)
chr4 (14-46)||(3036495-3036527)
chr4 (13-61)||(4201403-4201451)
chr4 (14-46)||(6091453-6091485)
chr4 (10-62)||(8456995-8457047)
chr4 (10-62)||(14090348-14090400)
chr4 (13-61)||(21044832-21044880)
chr4 (13-61)||(23719869-23719917)
chr4 (13-61)||(33084589-33084637)
chr4 (10-62)||(34603732-34603784)
chr4 (13-61)||(36408834-36408882)
chr4 (13-61)||(36423000-36423048)
chr4 (13-61)||(37502133-37502181)
chr4 (14-46)||(38542376-38542408)
chr4 (13-61)||(40412054-40412102)
chr4 (13-61)||(44013998-44014046)
chr4 (130-162)||(44217689-44217721)
chr4 (13-61)||(48782311-48782358)
chr4 (13-61)||(52257876-52257924)
chr4 (14-46)||(53467652-53467684)
chr4 (10-46)||(55703028-55703064)
chr4 (13-61)||(55935218-55935266)
[»] chr2 (47 HSPs)
chr2 (10-62)||(37660842-37660894)
chr2 (13-61)||(15893667-15893715)
chr2 (10-61)||(4883708-4883759)
chr2 (10-61)||(37077275-37077326)
chr2 (10-60)||(11222404-11222454)
chr2 (12-61)||(38148122-38148171)
chr2 (13-61)||(479060-479108)
chr2 (13-61)||(10263865-10263913)
chr2 (13-61)||(10812307-10812355)
chr2 (13-61)||(14288539-14288587)
chr2 (13-61)||(14541439-14541487)
chr2 (13-61)||(15183088-15183136)
chr2 (13-61)||(19594458-19594506)
chr2 (13-61)||(26342688-26342736)
chr2 (13-61)||(34399310-34399358)
chr2 (13-61)||(36375681-36375729)
chr2 (465-523)||(2758483-2758541)
chr2 (12-62)||(28967317-28967367)
chr2 (10-62)||(7529790-7529843)
chr2 (20-61)||(36404928-36404969)
chr2 (13-46)||(38072328-38072361)
chr2 (13-46)||(41885733-41885766)
chr2 (13-61)||(2012969-2013017)
chr2 (13-61)||(3363692-3363740)
chr2 (16-60)||(3376365-3376409)
chr2 (13-61)||(4654827-4654875)
chr2 (13-61)||(13000998-13001046)
chr2 (13-61)||(14308501-14308549)
chr2 (13-61)||(30264689-30264737)
chr2 (13-61)||(34721570-34721618)
chr2 (10-46)||(37093555-37093591)
chr2 (13-61)||(38186139-38186187)
chr2 (14-61)||(14295844-14295891)
chr2 (13-60)||(15677379-15677426)
chr2 (128-163)||(29041931-29041966)
chr2 (13-60)||(44360541-44360588)
chr2 (15-61)||(25558273-25558319)
chr2 (13-46)||(28145674-28145707)
chr2 (16-61)||(34357289-34357334)
chr2 (14-62)||(928119-928167)
chr2 (13-61)||(9706895-9706943)
chr2 (14-46)||(11560149-11560181)
chr2 (13-61)||(13754063-13754111)
chr2 (13-61)||(13965715-13965763)
chr2 (130-162)||(19594331-19594363)
chr2 (14-62)||(25787446-25787494)
chr2 (13-61)||(31025027-31025075)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-61)||(77196-77244)
[»] chr6 (33 HSPs)
chr6 (13-61)||(7056225-7056273)
chr6 (10-62)||(32251035-32251087)
chr6 (10-46)||(3621695-3621731)
chr6 (12-60)||(19812063-19812111)
chr6 (13-61)||(23777404-23777452)
chr6 (15-61)||(17124070-17124116)
chr6 (15-61)||(26485770-26485816)
chr6 (13-46)||(373831-373864)
chr6 (13-46)||(24663487-24663520)
chr6 (13-61)||(1252274-1252322)
chr6 (13-61)||(7235548-7235596)
chr6 (13-61)||(9838207-9838255)
chr6 (13-61)||(17193266-17193314)
chr6 (13-61)||(17601225-17601273)
chr6 (13-61)||(17836001-17836049)
chr6 (13-61)||(26470808-26470856)
chr6 (13-60)||(52771-52818)
chr6 (10-61)||(1751516-1751567)
chr6 (13-60)||(22050156-22050203)
chr6 (128-162)||(24356281-24356315)
chr6 (13-46)||(364642-364675)
chr6 (13-46)||(1249647-1249680)
chr6 (130-163)||(2381238-2381271)
chr6 (13-46)||(12732283-12732316)
chr6 (13-62)||(15432779-15432828)
chr6 (16-61)||(30237089-30237134)
chr6 (13-46)||(30388829-30388862)
chr6 (12-61)||(31854574-31854623)
chr6 (13-61)||(8992656-8992704)
chr6 (13-61)||(9017103-9017151)
chr6 (14-62)||(11000893-11000941)
chr6 (13-61)||(13597517-13597565)
chr6 (13-61)||(23923798-23923846)
[»] chr1 (56 HSPs)
chr1 (465-525)||(38002938-38002998)
chr1 (10-61)||(43500611-43500662)
chr1 (11-60)||(11248887-11248936)
chr1 (13-61)||(12124752-12124800)
chr1 (13-61)||(13566787-13566835)
chr1 (13-61)||(13699282-13699330)
chr1 (13-61)||(18033907-18033955)
chr1 (13-61)||(29830861-29830909)
chr1 (13-61)||(30686519-30686567)
chr1 (13-61)||(37609382-37609430)
chr1 (465-525)||(38003607-38003667)
chr1 (13-61)||(38597699-38597747)
chr1 (13-61)||(45368196-45368244)
chr1 (14-61)||(9362082-9362129)
chr1 (13-60)||(20605706-20605753)
chr1 (14-61)||(35483862-35483909)
chr1 (14-61)||(51974252-51974299)
chr1 (15-61)||(10506921-10506967)
chr1 (13-46)||(1024664-1024697)
chr1 (13-46)||(1677306-1677339)
chr1 (12-61)||(9127776-9127825)
chr1 (13-61)||(8464338-8464386)
chr1 (13-61)||(10676010-10676058)
chr1 (13-61)||(12231152-12231200)
chr1 (13-61)||(19349460-19349508)
chr1 (13-61)||(24781815-24781863)
chr1 (13-61)||(28679129-28679177)
chr1 (128-164)||(32168535-32168571)
chr1 (13-61)||(32994550-32994598)
chr1 (13-61)||(35700456-35700504)
chr1 (14-46)||(44818563-44818595)
chr1 (13-61)||(48508241-48508289)
chr1 (13-61)||(50825653-50825701)
chr1 (10-46)||(51972377-51972413)
chr1 (10-61)||(2572076-2572127)
chr1 (13-44)||(13507878-13507909)
chr1 (13-44)||(13515066-13515097)
chr1 (10-61)||(39412592-39412643)
chr1 (16-46)||(45226673-45226703)
chr1 (128-166)||(51613387-51613425)
chr1 (15-61)||(52749125-52749171)
chr1 (130-163)||(37609526-37609559)
chr1 (129-162)||(37735363-37735396)
chr1 (128-168)||(1038057-1038097)
chr1 (128-168)||(1044963-1045003)
chr1 (14-46)||(1427788-1427820)
chr1 (13-61)||(1429392-1429440)
chr1 (13-61)||(2059893-2059941)
chr1 (13-61)||(5598163-5598211)
chr1 (13-61)||(19929547-19929595)
chr1 (13-61)||(21927777-21927825)
chr1 (13-57)||(32348086-32348130)
chr1 (13-61)||(38648565-38648613)
chr1 (13-61)||(43952896-43952944)
chr1 (13-61)||(48265117-48265165)
chr1 (13-61)||(49497260-49497308)
[»] scaffold0236 (1 HSPs)
scaffold0236 (12-62)||(14334-14384)
[»] scaffold0006 (2 HSPs)
scaffold0006 (12-62)||(96145-96195)
scaffold0006 (130-167)||(96040-96077)
[»] scaffold0003 (3 HSPs)
scaffold0003 (12-62)||(252701-252751)
scaffold0003 (130-163)||(252819-252852)
scaffold0003 (130-162)||(252574-252606)
[»] chr3 (62 HSPs)
chr3 (12-61)||(23771394-23771443)
chr3 (13-62)||(45101447-45101496)
chr3 (12-61)||(53055338-53055387)
chr3 (13-61)||(19550354-19550402)
chr3 (13-61)||(28885786-28885834)
chr3 (13-61)||(40010754-40010802)
chr3 (13-61)||(41168869-41168917)
chr3 (13-61)||(43775480-43775528)
chr3 (13-61)||(45513705-45513753)
chr3 (13-61)||(49123631-49123679)
chr3 (13-61)||(50092053-50092101)
chr3 (13-61)||(52663550-52663598)
chr3 (10-61)||(5244025-5244076)
chr3 (11-46)||(13168123-13168158)
chr3 (10-61)||(24981395-24981446)
chr3 (14-61)||(41351284-41351331)
chr3 (10-61)||(42671980-42672031)
chr3 (14-61)||(54106372-54106419)
chr3 (13-60)||(54898177-54898224)
chr3 (15-61)||(27483878-27483924)
chr3 (15-61)||(51697654-51697700)
chr3 (12-61)||(3376394-3376443)
chr3 (13-46)||(29651776-29651809)
chr3 (13-46)||(47069962-47069995)
chr3 (462-523)||(47955221-47955282)
chr3 (13-46)||(51244732-51244765)
chr3 (129-162)||(53055713-53055746)
chr3 (13-61)||(24154-24202)
chr3 (13-61)||(8236985-8237033)
chr3 (13-61)||(27039696-27039744)
chr3 (13-61)||(27992348-27992396)
chr3 (13-61)||(29458293-29458341)
chr3 (13-61)||(32854038-32854086)
chr3 (13-61)||(33074368-33074416)
chr3 (13-61)||(33491229-33491277)
chr3 (17-61)||(34266530-34266574)
chr3 (13-61)||(40139924-40139972)
chr3 (14-46)||(43945488-43945520)
chr3 (462-522)||(47956121-47956181)
chr3 (13-60)||(7328563-7328610)
chr3 (11-61)||(6902384-6902434)
chr3 (12-46)||(32980747-32980781)
chr3 (23-61)||(44544117-44544155)
chr3 (128-162)||(47104387-47104421)
chr3 (22-59)||(2642819-2642856)
chr3 (16-61)||(11473513-11473558)
chr3 (13-46)||(20105300-20105333)
chr3 (13-46)||(27028120-27028153)
chr3 (13-46)||(28943639-28943672)
chr3 (13-46)||(30861647-30861680)
chr3 (13-58)||(41425737-41425782)
chr3 (16-61)||(48152096-48152141)
chr3 (13-46)||(53282087-53282120)
chr3 (20-61)||(55141566-55141607)
chr3 (130-162)||(2642927-2642959)
chr3 (13-61)||(13158529-13158577)
chr3 (16-60)||(17102865-17102909)
chr3 (10-62)||(34750760-34750812)
chr3 (13-61)||(39866939-39866987)
chr3 (13-61)||(42671503-42671551)
chr3 (13-61)||(53745372-53745419)
chr3 (17-61)||(54911391-54911435)
[»] scaffold0471 (1 HSPs)
scaffold0471 (13-61)||(1902-1950)
[»] scaffold0002 (3 HSPs)
scaffold0002 (11-46)||(138830-138865)
scaffold0002 (14-62)||(369512-369560)
scaffold0002 (13-61)||(148411-148459)
[»] scaffold0036 (2 HSPs)
scaffold0036 (13-62)||(23244-23293)
scaffold0036 (130-162)||(23362-23394)
[»] scaffold1213 (1 HSPs)
scaffold1213 (13-61)||(52-100)
[»] scaffold0280 (1 HSPs)
scaffold0280 (10-46)||(8259-8295)
[»] scaffold0192 (1 HSPs)
scaffold0192 (13-46)||(14821-14854)
[»] scaffold0040 (1 HSPs)
scaffold0040 (13-46)||(69208-69241)
[»] scaffold0001 (1 HSPs)
scaffold0001 (16-61)||(419577-419622)
[»] scaffold0886 (1 HSPs)
scaffold0886 (13-61)||(4623-4671)
[»] scaffold0831 (1 HSPs)
scaffold0831 (130-162)||(3034-3066)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-61)||(184212-184260)
[»] scaffold0009 (1 HSPs)
scaffold0009 (128-156)||(147355-147383)


Alignment Details
Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 165 - 328
Target Start/End: Complemental strand, 26259334 - 26259165
Alignment:
Q  165 ttttagatcaaatgaaaaagaaaatagagaaattataaaacattagatgtgactgttgacattttgctttgaaacattgatttccatgtttgagcac--- 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||       
T  26259334 ttttagatcaaattaaaaagaaaatagagaaattataaaacattagatgtgactattgacattttgttttgaaaaattgatttccatgtttgagcacttc 26259235  T
Q  262 ---tcctagtactatttttgcaataaagccttaatgtcgctgataaagaatagagaaatgataactagtt 328  Q
       | |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  26259234 tagttctagtactatttttgcaaaaaagcattaatgttgctgataaagaatagagaaatgataactagtt 26259165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 322 - 456
Target Start/End: Complemental strand, 26259139 - 26259007
Alignment:
Q  322 actagttattaatagtagcaagttaatgaaattaatgaactaatacatttccnnnnnnnnnnnnaattgaatgccctcttggttcaacatcatacattaa 421  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||            ||||||||||||||||||| ||||||||||||||||    
T  26259139 actagttattaatagcagcaagttaatgaaattaatgaactaatacacttccttttttttta--aattgaatgccctcttggtacaacatcatacattaa 26259042  T
Q  422 tctctcaagttgggatgagaattacaattactata 456  Q
    |||||| ||| ||||||||||||||||||| ||||    
T  26259041 tctctcgagtcgggatgagaattacaattattata 26259007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 9301673 - 9301626
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  9301673 gagagaaatatatgaaatgagatattaaatgatgaaggttattatagg 9301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 38074381 - 38074433
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  38074381 gcagagagataaatatatgaaatgagatattaaatgagcaagattattatagg 38074433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 23430014 - 23430065
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  23430014 gcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 23430065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 11163373 - 11163423
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  11163373 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattatagg 11163423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 9687646 - 9687598
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  9687646 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 9687598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12342746 - 12342698
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  12342746 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 12342698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 14263652 - 14263700
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  14263652 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 14263700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 15596452 - 15596500
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  15596452 gagagagaaatatatgaaataagatattaaatgaataaggttattatag 15596500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 26062815 - 26062863
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  26062815 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 26062863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33935192 - 33935144
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  33935192 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 33935144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 34046959 - 34047007
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  34046959 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 34047007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 36112073 - 36112025
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  36112073 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 36112025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 38482924 - 38482876
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  38482924 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 38482876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 9808106 - 9808059
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  9808106 gagagagaaatatatgaaatgagatattaaatgaataaggtcattata 9808059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 3513463 - 3513513
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  3513463 cagagagataaatatatgaaatgagatattaaatgaataaggtcattatag 3513513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 9954757 - 9954803
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattat 59  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||    
T  9954757 gagagagaaatatatgaaatgagatattaaatgaataaggtcattat 9954803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 12763542 - 12763575
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  12763542 gagagagaaatatatgaaatgagatattaaatga 12763575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 21651875 - 21651830
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||    
T  21651875 agagaaatatatgaaatgagatattaaatgaataaggtcattatag 21651830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 33314652 - 33314685
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  33314652 gagagagaaatatatgaaatgagatattaaatga 33314685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 36058340 - 36058373
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  36058340 gagagagaaatatatgaaatgagatattaaatga 36058373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 41890629 - 41890678
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  41890629 agagagataagtatatgaaataagatattaaatgatgaaggttattatag 41890678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10180478 - 10180526
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  10180478 gagaaagaaatatatgaaatgagatattaaatgaataaggtcattatag 10180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13174037 - 13174085
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||||    
T  13174037 gagagagaaatatatgaaataagatattaaatgactaaggctattatag 13174085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13327887 - 13327935
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  13327887 gagagagaaatatatgaaatgagatattaaataaataaggtcattatag 13327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 14228454 - 14228406
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  14228454 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 14228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 18291571 - 18291619
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  18291571 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 18291619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 18842637 - 18842685
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  18842637 gagagagaaatatatgtaatgagatattaaataaataaggttattatag 18842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 29126007 - 29126059
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||| |||||    
T  29126007 gcagagagagaaatatatgaaatgaagtattaaatgattaaggttatcatagg 29126059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32010216 - 32010168
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  32010216 gagagagaaatatatgaaatgagatgttaaatgaacaaggtcattatag 32010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 34981937 - 34981985
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||    
T  34981937 gagagagaaatacatgaaatgagatattaaatgaataaggtcattatag 34981985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 35052161 - 35052209
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  35052161 gagagagaaatatatgaaatgagatattaaataaataaggtcattatag 35052209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 35296152 - 35296200
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||||    
T  35296152 gagagagaaatatatgaaataagatattaaatgattaaggctattatag 35296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 38128679 - 38128631
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  38128679 gagatagaaatatatgaaatgagatattaaatgaataaggtcattatag 38128631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40228403 - 40228451
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  40228403 gagagagaaatatatgaaatgacatattaaatgaataaggtcattatag 40228451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 43553147 - 43553195
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  |||| ||||||||    
T  43553147 gagagagaaatatatgaaatgaaatattaaatgaataaggatattatag 43553195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 3720905 - 3720940
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatat 165  Q
    |||||||||||||||||||||||||||| |||||||    
T  3720905 aaaagtgacaattaaaaaggaacggagatagtatat 3720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 4057396 - 4057427
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaat 44  Q
    ||||||||||||||||||||||||||||||||    
T  4057396 gagagagaaatatatgaaatgagatattaaat 4057427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 11163491 - 11163526
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatat 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11163491 aaaagtgacaattaaaaaggaacggagggagtatat 11163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 23848688 - 23848641
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  23848688 gagagagaaatatatgaaataagatattaaatgaataaggtcattata 23848641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 27518845 - 27518814
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaat 44  Q
    ||||||||||||||||||||||||||||||||    
T  27518845 gagagagaaatatatgaaatgagatattaaat 27518814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 7483852 - 7483898
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||| |||||||||||||  |||| ||||||||    
T  7483852 gagagaaatatatgaaataagatattaaatgactaaggctattatag 7483898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 8954832 - 8954782
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||| || |||||||||| ||||||||||||| |||| ||||||||||    
T  8954832 agagagataagtatatgaaataagatattaaatgatgaagattattatagg 8954782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 2335541 - 2335574
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  2335541 gagagagaaatatatgaaataagatattaaatga 2335574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 2888600 - 2888555
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttatta 58  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||    
T  2888600 gagagagaaatatatgtaatgagatattaaataaataaggttatta 2888555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 6750723 - 6750756
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  6750723 gagagagaaatatatgaaataagatattaaatga 6750756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 6757514 - 6757547
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  6757514 gagagagaaatatatgaaataagatattaaatga 6757547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 11707617 - 11707584
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  11707617 gagagagaaatatatgaaataagatattaaatga 11707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 15623743 - 15623710
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  15623743 gagagagaaatatatgaaataagatattaaatga 15623710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 15647531 - 15647498
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  15647531 gagagagaaatatatgaaataagatattaaatga 15647498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 16656808 - 16656841
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  16656808 gagagagaaatatatgaaataagatattaaatga 16656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 16701025 - 16700992
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  16701025 gagagagaaatatatgaaataagatattaaatga 16700992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 17718515 - 17718482
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    ||||||||||||||||||||||||||| ||||||    
T  17718515 aaaagtgacaattaaaaaggaacggagggagtat 17718482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 25703805 - 25703846
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatattttaga 171  Q
    |||||||||| |||||||||||||||| |||||| |||||||    
T  25703805 aaaagtgacacttaaaaaggaacggagggagtatgttttaga 25703846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 25812976 - 25813017
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatattttaga 171  Q
    |||||||||| |||||||||||||||| |||||| |||||||    
T  25812976 aaaagtgacacttaaaaaggaacggagggagtatgttttaga 25813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 167609 - 167561
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||| |||||||||||||||| |  |||||||||||||    
T  167609 gagagataaatatataaaatgagatattaaattaataaggttattatag 167561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 3720692 - 3720660
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  3720692 aaaagtgacaattaaaaaggaacggagggagta 3720660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 8554148 - 8554100
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| |||||||| |||||| |  |||||||||||||    
T  8554148 gagagagaaatatatgtaatgagatgttaaataaataaggttattatag 8554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 11015992 - 11015948
Alignment:
Q  17 gagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||   |||||||||||| |||||||||||||    
T  11015992 gagaaatatatgaaatcgaatattaaatgagtaaggttattatag 11015948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12248902 - 12248854
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||| |||||| |||||||||||  |||||||||||||    
T  12248902 gagaaagaaatatataaaatgaaatattaaatgaataaggttattatag 12248854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17074714 - 17074666
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||| ||||||||||||||| |  |||||||||||||    
T  17074714 gagagaaaaatatatgtaatgagatattaaataaataaggttattatag 17074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 17573556 - 17573604
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||| ||||||||||||||| |  |||||||||||||    
T  17573556 gagagaaaaatatatgtaatgagatattaaataaataaggttattatag 17573604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 23429921 - 23429885
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatatt 166  Q
    |||||||||| |||||||||||||||| |||||||||    
T  23429921 aaaagtgacacttaaaaaggaacggagggagtatatt 23429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 23855665 - 23855713
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||| |||||||||||||||| |  |||||||||||||    
T  23855665 gagagataaatatataaaatgagatattaaataaataaggttattatag 23855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 31028669 - 31028633
Alignment:
Q  127 cctaaaagtgacaattaaaaaggaacggagagagtat 163  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  31028669 cctaaaagtgacaattataaagaaacggagagagtat 31028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 35029655 - 35029702
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||||| |||||||||||  |||||||||||||    
T  35029655 gagagagaaatatat-aaatgaaatattaaatgaataaggttattatag 35029702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 38221920 - 38221968
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| ||||||||||||||| |||||||||||||  |||| ||||||||    
T  38221920 gagaaagaaatatatgaaataagatattaaatgactaaggctattatag 38221968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 39303648 - 39303600
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||| || |||||||||||||  ||||| |||||||    
T  39303648 gagagagaaatatatgatataagatattaaatgaataaggtcattatag 39303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 42352853 - 42352893
Alignment:
Q  20 aaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  42352853 aaatatatgaaatgaggtattaaatgaataaggttattata 42352893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 46563259 - 46563209
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46563259 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 46563209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 30586814 - 30586763
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  30586814 gcagagagagaaatatatgaaatgagatattaaatgattaaggttattatag 30586763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 26803566 - 26803516
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  26803566 agagagagaaatatataaaatgagatattaaatgatgaaggttattatagg 26803516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 31430667 - 31430715
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31430667 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 31430715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 3178035 - 3178086
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  3178035 gcagagagagaaatatatgaaaagatatattaaatgacgaaggttattatag 3178086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 8966036 - 8965986
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  8966036 agagagagaaatacatgaaataagatattaaatgatgaaggttattatagg 8965986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 32966186 - 32966136
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  32966186 cagagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 32966136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 35684260 - 35684310
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  35684260 agagagagaagtatatgaaatgagatattaaatgacgaagattattatagg 35684310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12838213 - 12838165
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||    
T  12838213 gagagagaaatatatgaaatgagatattaaataaataaggttattatag 12838165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17896658 - 17896610
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  17896658 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 17896610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 26632315 - 26632267
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  26632315 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 26632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 33257989 - 33258037
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  33257989 gagagagaaatatataaaatgagatattaaatgaataaggttattatag 33258037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 22950955 - 22950920
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  22950955 cagagagagaaatatatgaaatgagatattaaatga 22950920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 33921908 - 33921861
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||    
T  33921908 agagagaaatatatgaaatgagatattaaatgaataaggtcattatag 33921861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 44480276 - 44480229
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||    
T  44480276 agagagaaatatatgaaatgagatattaaatgaataaggtcattatag 44480229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 3177943 - 3177901
Alignment:
Q  129 taaaagtgacaattaaaaaggaacggagagagtatattttaga 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  3177943 taaaagtgacaattaaaaaggaacggagggagtataatttaga 3177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 8380725 - 8380679
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  8380725 gagagaaatatatgaaataagatattaaatgactaaggttattatag 8380679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 8381936 - 8381982
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  8381936 gagagaaatatatgaaatgagatattaaatgaataaggtcattatag 8381982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 18470415 - 18470448
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  18470415 gagagagaaatatatgaaatgagatattaaatga 18470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 20035156 - 20035189
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  20035156 gagagagaaatatatgaaatgagatattaaatga 20035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 20045567 - 20045600
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  20045567 gagagagaaatatatgaaatgagatattaaatga 20045600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 32528463 - 32528430
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  32528463 gagagagaaatatatgaaatgagatattaaatga 32528430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 5732208 - 5732160
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  5732208 gagagagaaatatatgaaatgagattttaaatgaataaggtcattatag 5732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 7312725 - 7312773
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  7312725 gagagagaaatatatgaaatgagatattaaataaataaggtcattatag 7312773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 26724032 - 26724080
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  26724032 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 26724080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 29497669 - 29497621
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  29497669 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 29497621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 33173912 - 33173948
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33173912 gcagagagagaaatatatgaaatgagattttaaatga 33173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 36922347 - 36922395
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  36922347 gagaaagaaatatatgaaatgagatattaaatgaataaggtcattatag 36922395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 40261572 - 40261512
Alignment:
Q  465 aaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagttttta 525  Q
    |||||||| || |||||||||||||||||||| ||  |||| |||| ||||||||||||||    
T  40261572 aaattacagtcacctcccttaaggtattcttatatgacactaacatcccctctagttttta 40261512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 41889451 - 41889419
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||||    
T  41889451 agagagaaatatatgaaatgagatattaaatga 41889419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 48981611 - 48981643
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    |||||||||||||||||||||||||||||||||    
T  48981611 aaaagtgacaattaaaaaggaacggagagagta 48981643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 7477332 - 7477285
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  7477332 agagagaaatatatgaaatgagatattaaattaataaggtcattatag 7477285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 8965918 - 8965883
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatat 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  8965918 aaaagtgacaattaaaaaggaacggagggagtatat 8965883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 38168924 - 38168877
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||    
T  38168924 gagagagaaatatatgaaatgagatgttaaatgaataaggtcattata 38168877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 46563354 - 46563393
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatatttta 169  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  46563354 aaaagtgacaattaaaaaggaacggaggtagtatatttta 46563393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 8966131 - 8966165
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtata 164  Q
    ||||||||||||||||||||||||||| |||||||    
T  8966131 aaaagtgacaattaaaaaggaacggagggagtata 8966165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33099968 - 33099922
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||  ||||| |||||||    
T  33099968 gagataaatatatgaaatgagatattaaatgaataaggtcattatag 33099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 47408227 - 47408269
Alignment:
Q  19 gaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| |||||||||||  |||||||||||||    
T  47408227 gaaatatatgaaatgaaatattaaatgaataaggttattatag 47408269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 36298309 - 36298276
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  36298309 gagagagaaatatatgaaataagatattaaatga 36298276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 36406862 - 36406907
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| |||| |||||||||||||  |||||||||||||    
T  36406862 agagaaatatattaaataagatattaaatgactaaggttattatag 36406907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 13431360 - 13431396
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtata 164  Q
    |||||||||||||||||||| |||||||| |||||||    
T  13431360 ctaaaagtgacaattaaaaaagaacggagggagtata 13431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 28608702 - 28608750
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||| ||||||||| |  |||||||||||||    
T  28608702 gagagagaaatatatgtaatgatatattaaataaataaggttattatag 28608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 30866871 - 30866823
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||| |||||||||||||  |||| ||||||||    
T  30866871 gagagagaaatatataaaataagatattaaatgactaaggctattatag 30866823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 36648140 - 36648092
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  36648140 gagagagaaatatatgaaatgagatgttaaattaacaaggtcattatag 36648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 37354005 - 37353957
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| || ||||||||  ||||| |||||||    
T  37354005 gagagagaaatatatgaaatgaaatgttaaatgaataaggtcattatag 37353957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 41891378 - 41891426
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||||| |||||||||||  ||||| |||||||    
T  41891378 gagagagaaatatataaaatgatatattaaatgaataaggtcattatag 41891426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 44820732 - 44820684
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| | |||||||||||  |||||||||||||    
T  44820732 gagagaaaaatatatgaaataaaatattaaatgaataaggttattatag 44820684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 25785996 - 25786044
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25785996 agagagagaaatatatgaaatgagatattaaatgaggaaggttattata 25786044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 4175609 - 4175561
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4175609 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 4175561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 25344050 - 25344098
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  25344050 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 25344098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 18393101 - 18393051
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  18393101 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattatagg 18393051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 525
Target Start/End: Complemental strand, 295063 - 294999
Alignment:
Q  461 aggtaaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagttttta 525  Q
    ||||||||||||||| |||||||| ||||||||||||||  |||| |||  ||||||||||||||    
T  295063 aggtaaattacactcacctcccttcaggtattcttaaatgacactaacaccccctctagttttta 294999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4098421 - 4098469
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  4098421 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 4098469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 7408421 - 7408469
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||    
T  7408421 gagagaaaaatatatgaaatgagatattaaatgaataaggttattatag 7408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 8825147 - 8825195
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  8825147 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 8825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 9076161 - 9076209
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  9076161 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 9076209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12664948 - 12664996
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  12664948 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 12664996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 16124389 - 16124341
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  16124389 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 16124341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 28463514 - 28463466
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  28463514 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 28463466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 34261402 - 34261450
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  34261402 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 34261450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 39073138 - 39073182
Alignment:
Q  17 gagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  39073138 gagaaatatatgaaatgagatattaaatgaataaggttattatag 39073182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 38502929 - 38502894
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgagg 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  38502929 gagagagaaatatatgaaatgagatattaaatgagg 38502894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4609113 - 4609159
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttatta 58  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||    
T  4609113 agagagagaagtaaatgaaatgagatattaaatgatgaaggttatta 4609159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 11413660 - 11413610
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||||||||||    
T  11413660 agagagagaagtatgtgaaattagatattaaatgatgaaggttattatagg 11413610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 18676545 - 18676495
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| ||||||||||  |||||||||||| |||||||||||||||    
T  18676545 agagagagaagtatatgaaataggatattaaatgatgaaggttattatagg 18676495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 1088062 - 1088029
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  1088062 gagagagaaatatatgaaatgagatattaaatga 1088029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 4017507 - 4017552
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  4017507 agagaaatatatgaaatgagatgttaaatgaataaggttattatag 4017552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 7579794 - 7579749
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||    
T  7579794 agagaaatatatgaaatgagatattaaatgaataaggtcattatag 7579749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 37303236 - 37303203
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  37303236 gagagagaaatatatgaaatgagatattaaatga 37303203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 4427535 - 4427487
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||||||  |||| |||||||    
T  4427535 gagagagaaatatatgaaatgagatgttaaatgagtgaggtcattatag 4427487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 4688930 - 4688894
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4688930 gcagagagaaaaatatatgaaatgagatattaaatga 4688894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4694854 - 4694902
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  4694854 gagagagaaatatatgaaatgagatgttaaatgaacaaggtcattatag 4694902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 4985304 - 4985256
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  4985304 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 4985256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 6072542 - 6072590
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||    
T  6072542 gagagagaaatatattaaatgagatattaaatgaataaggtcattatag 6072590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 6754308 - 6754260
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  6754308 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 6754260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18020897 - 18020849
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||| ||||||  ||||| |||||||    
T  18020897 gagagagaaatatatgaaatgagatatcaaatgaataaggtcattatag 18020849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18437452 - 18437404
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  18437452 gagagagaaatatatgaaatgagataataaataaataaggttattatag 18437404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 18794873 - 18794921
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  18794873 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 18794921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 22582562 - 22582610
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  22582562 gagagaaaaatatatgaaatgagatattaaatgaataaggtcattatag 22582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 24229038 - 24229086
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  24229038 gagagagaaatatatgaaattagatattgaatgaataaggttattatag 24229086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 38017406 - 38017358
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  38017406 gagagagaaatatatgaaatgtgatattaaatgaataaggtcattatag 38017358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 38363280 - 38363312
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||||    
T  38363280 agagagaaatatatgaaatgagatattaaatga 38363312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 1297866 - 1297819
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  1297866 agagataaatatatgaaatgagatattaaatgaataaggtcattatag 1297819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 5144127 - 5144080
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||||    
T  5144127 gagagagaaatatatgaaataagatattaaatgactaaggctattata 5144080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 8849271 - 8849218
Alignment:
Q  10 gcagagagagaaatatatgaaatgaga--tattaaatgaggaaggttattatag 61  Q
    |||||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  8849271 gcagagagagaaatgtatgaaatgagaagtattaaatgattaaggttattatag 8849218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 32440044 - 32439994
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||| ||||||| |||||||||||||  |||| |||||||    
T  32440044 gcagagagagaaatacatgaaataagatattaaatgactaaggctattata 32439994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 3243886 - 3243935
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||| |||||||| ||||||||||||||||||  |||| |||||||||    
T  3243886 gagagaaaaatatataaaatgagatattaaatgaataaggctattatagg 3243935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7403949 - 7403990
Alignment:
Q  20 aaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  7403949 aaatatatgaaatgagatattaaatgaataaggtcattatag 7403990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 8229932 - 8229899
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||| ||||||||    
T  8229932 gagagagaaatatatgaaatgagatgttaaatga 8229899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 14793916 - 14793871
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| ||||||||  ||||| |||||||    
T  14793916 agagaaatatatgaaatgagatgttaaatgaataaggtcattatag 14793871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 21150581 - 21150630
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| || |||||||||| ||||||||||||| ||||||| ||||||    
T  21150581 agagagataagtatatgaaataagatattaaatgatgaaggtttttatag 21150630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 21157722 - 21157771
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| || |||||||||| ||||||||||||| ||||||| ||||||    
T  21157722 agagagataagtatatgaaataagatattaaatgatgaaggtttttatag 21157771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 24074967 - 24074934
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  24074967 gagagagaaatatatgaaataagatattaaatga 24074934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 2134035 - 2133987
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  2134035 gagagagaaatatatgaaatgagatgttaaattaataaggtcattatag 2133987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 2674106 - 2674074
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||| |||||||||||||    
T  2674106 agagagaaatatatgaaattagatattaaatga 2674074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 4609232 - 4609264
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  4609232 aaaagtgacaattaaaaaggaacggagggagta 4609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 5119268 - 5119316
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||| |||||| |  |||||||||||||    
T  5119268 gagagaaaaatatatgaaatgagatgttaaattaataaggttattatag 5119316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 9127480 - 9127432
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||| |||||||||||||  ||||| |||||||    
T  9127480 gagagagaaatatataaaataagatattaaatgaataaggtcattatag 9127432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12870028 - 12869980
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||||| |||||||||||  ||||| |||||||    
T  12870028 gagagagaaatatataaaatgaaatattaaatgaataaggtcattatag 12869980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 13703304 - 13703336
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    |||||||||||||||||||||||||||| ||||    
T  13703304 aaaagtgacaattaaaaaggaacggagatagta 13703336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 21157840 - 21157872
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  21157840 aaaagtgacaattaaaaaggaacggagggagta 21157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 26854223 - 26854176
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  26854223 gagagagaaatatatgaaatg-gatattaaatgaataaggtcattatag 26854176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 28024388 - 28024340
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||| ||||||||  ||||| |||||||    
T  28024388 gagagagaaatatataaaatgagatgttaaatgaataaggtcattatag 28024340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 36239548 - 36239596
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| ||||||||||| |  ||||| |||||||    
T  36239548 gagagagaaatatatgaaataagatattaaattaataaggtcattatag 36239596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 38702231 - 38702279
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| ||||||||||| |  ||||| |||||||    
T  38702231 gagagagaaatatatgaaataagatattaaataaataaggtcattatag 38702279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40198878 - 40198926
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| |||||||||||| ||||||||  ||||| |||||||    
T  40198878 gagagagaaataaatgaaatgagatgttaaatgaataaggtcattatag 40198926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 1181037 - 1180985
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1181037 gcagagagagaaatatatgaaatgagatattaaatgagaaaggttattatagg 1180985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 1615187 - 1615139
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1615187 agagagaaatatatgaaatgagatattaaatgatgaaggttattatagg 1615139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 13629326 - 13629278
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13629326 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 13629278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 44217817 - 44217865
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  44217817 gagagagaaatatatgaaatgagatattaaatgaagaaggtcattatag 44217865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 1146183 - 1146136
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattat 59  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1146183 agagagagaaatatatgaaatgagatattaaatgatgaaggtaattat 1146136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 16464918 - 16464867
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  16464918 gcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 16464867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 34925478 - 34925427
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  34925478 gcagaaagagaaatatatgaaatgagatattaaattaggaagattattatag 34925427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 38866013 - 38866062
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  38866013 agagagagaaatatatgtaatgagatattaaatgattaaggttattatag 38866062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 35232431 - 35232383
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  35232431 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 35232383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 43086515 - 43086563
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  43086515 agagagaaatatatgaaaagaaatattaaatgatgaaggttattatagg 43086563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 44069142 - 44069190
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  44069142 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 44069190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 52677278 - 52677230
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  52677278 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 52677230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 29295465 - 29295512
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  29295465 gagagagaaatatatgaaatgagatattaaatgaataaggtcattata 29295512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 35381548 - 35381501
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  35381548 gagagagaaatatatgaaatgagatattaaatgaataaggtcattata 35381501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 39671433 - 39671484
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  39671433 gcagagaaagaaatatatgaaatgagatattaaatgaataaggtcattatag 39671484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 39683849 - 39683814
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  39683849 cagagagagaaatatatgaaatgagatattaaatga 39683814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 1180920 - 1180882
Alignment:
Q  127 cctaaaagtgacaattaaaaaggaacggagagagtatat 165  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1180920 cctaaaagtgacaattaaaaaggaacggagggagtatat 1180882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 6150804 - 6150854
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||| ||||||||||||||| |||||||||||||||    
T  6150804 agagagagaagtaaatgaagtgagatattaaatgatgaaggttattatagg 6150854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33755162 - 33755116
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  33755162 gagagaaatatatgaaatgagatattaaatgaataaggtcattatag 33755116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 33809102 - 33809064
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatatttt 168  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  33809102 aaaagtgacaattaaaaaggaacggagagagtatttttt 33809064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 54029208 - 54029258
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||| || |||||||||| ||||||||||||| |||||||||||||||    
T  54029208 agagagataattatatgaaataagatattaaatgatgaaggttattatagg 54029258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 5374483 - 5374450
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  5374483 gagagagaaatatatgaaatgagatattaaatga 5374450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 20294398 - 20294446
Alignment:
Q  16 agagaaatatatgaaatgagatatta--aatgaggaaggttattatagg 62  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  20294398 agagaaatatatgaaatgagatattaataatgatgaaggttattatagg 20294446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 354077 - 354125
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  354077 gagagataaatatatgaaatgagatattaaatgaataaggtcattatag 354125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 3436200 - 3436152
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  3436200 gagagagaaatatatgaaatgaaatattaaattaataaggttattatag 3436152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 3802270 - 3802318
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||| |||||||||| | ||||||||||| |||||||||||||    
T  3802270 agagagagaagtatatgaaataaaatattaaatgatgaaggttattata 3802318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16664352 - 16664400
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  16664352 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 16664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19093286 - 19093238
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  19093286 gagagaggaatatatgaaatgagatattaaatgaataaggtcattatag 19093238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 22678442 - 22678394
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  22678442 gagagataaatatatgaaatgagatattaaatgaataaggtcattatag 22678394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 38617440 - 38617392
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  38617440 gagagataaatatatgaaatgagatattaaatgaataaggtcattatag 38617392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 39309039 - 39309091
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||  |||||||| |  ||||||||||||||    
T  39309039 gcagagagagaaatatatgaaatgaagtattaaattattaaggttattatagg 39309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 43888000 - 43887964
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtata 164  Q
    ||||||||||||||||||||||||||||| |||||||    
T  43888000 ctaaaagtgacaattaaaaaggaacggagggagtata 43887964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 46872032 - 46872080
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  46872032 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 46872080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 53599919 - 53599871
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  53599919 gagagagaaatatatgaaatgtgatattaaatgaataaggtcattatag 53599871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 1391187 - 1391152
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatat 165  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1391187 aaaagtgacaaataaaaaggaacggagagagtatat 1391152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8741757 - 8741710
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||| ||||||||||||||||||||||||||||  ||||| ||||||    
T  8741757 gagagtgaaatatatgaaatgagatattaaatgaataaggtcattata 8741710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 26906522 - 26906491
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaat 44  Q
    ||||||||||||||||||||||||||||||||    
T  26906522 gagagagaaatatatgaaatgagatattaaat 26906491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 44176722 - 44176675
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||| |||||||||||  || |||||||||    
T  44176722 gagagagaaatatatgaaatgaaatattaaatgaataaagttattata 44176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 47251524 - 47251571
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||||||    
T  47251524 gagagataaatatatgaaatgagatattaaatgaataaggtcattata 47251571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 52978358 - 52978311
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||| ||||||||||||||  |||| ||||||||    
T  52978358 agagagaaatatatgaaaagagatattaaatgaataaggctattatag 52978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 53691881 - 53691916
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtat 163  Q
    |||||||||||||||||||||||||||||| |||||    
T  53691881 ctaaaagtgacaattaaaaaggaacggagatagtat 53691916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37551801 - 37551759
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaagg 52  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||    
T  37551801 gcagagagagaaacatatgaaatgaaatattaaatgatgaagg 37551759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 44549755 - 44549801
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||||| ||||||||  ||||| ||||||    
T  44549755 agagagaaatatatgaaatgagatgttaaatgaataaggtcattata 44549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 47885122 - 47885088
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||| |||||||||||||    
T  47885122 agagagagaaatatatgaaataagatattaaatga 47885088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 56499746 - 56499712
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||| |||||||||||||||||||||||||||    
T  56499746 agagagaaaaatatatgaaatgagatattaaatga 56499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 1181131 - 1181164
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    |||||||||||||||||||||||||||| |||||    
T  1181131 aaaagtgacaattaaaaaggaacggagatagtat 1181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 8735500 - 8735533
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||| |||||||||||||||||||||||||||    
T  8735500 gagagaaaaatatatgaaatgagatattaaatga 8735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 9834375 - 9834408
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||| ||||||||||||||||||    
T  9834375 gagagagaaatatattaaatgagatattaaatga 9834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 13435296 - 13435263
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaat 44  Q
    |||||| |||||||||||||||||||||||||||    
T  13435296 cagagaaagaaatatatgaaatgagatattaaat 13435263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 18135185 - 18135136
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||||    
T  18135185 agagagagaaatatatgtaatgaaatattaaataaataaggttattatag 18135136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 23237748 - 23237789
Alignment:
Q  20 aaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  23237748 aaatatatgaaatgagatattaaatgaataaggtcattatag 23237789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 26933907 - 26933874
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  26933907 gcagagagagaaatatatgaaatgaaatattaaa 26933874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 27492471 - 27492504
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||| |||||||||||    
T  27492471 gagagagaaatatatgaaatgaaatattaaatga 27492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 37551894 - 37551927
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    ||||||||||||||||||||||||||| ||||||    
T  37551894 aaaagtgacaattaaaaaggaacggagggagtat 37551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 41415118 - 41415151
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  41415118 gagagagaaatatatgaaataagatattaaatga 41415151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 47751641 - 47751674
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||| ||||||||||||||||||||    
T  47751641 gagagagaaatatctgaaatgagatattaaatga 47751674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 49122395 - 49122346
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||||    
T  49122395 agagagagaaatatatgtaatgaaatattaaataaataaggttattatag 49122346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 55147194 - 55147161
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||| ||||||||    
T  55147194 gagagagaaatatatgaaatgagatgttaaatga 55147161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 3036495 - 3036527
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||| |||||||||||||    
T  3036495 agagagaaatatatgaaataagatattaaatga 3036527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 4201451 - 4201403
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||||| |||||||||||  ||||| |||||||    
T  4201451 gagagataaatatatgaaatgaaatattaaatgaataaggtcattatag 4201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 6091485 - 6091453
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||| |||||||||||||    
T  6091485 agagagaaatatatgaaataagatattaaatga 6091453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 8457047 - 8456995
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||  |||||||||| |  |||| |||||||||    
T  8457047 gcagagagagaaatatatgaaatatgatattaaataattaaggatattatagg 8456995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 14090348 - 14090400
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||  |||||||||| |  |||| |||||||||    
T  14090348 gcagagagagaaatatatgaaatatgatattaaataattaaggatattatagg 14090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 21044880 - 21044832
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  ||||| |||||||    
T  21044880 gagagagaaatatatgcaatgagatattaaataaataaggtcattatag 21044832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 23719917 - 23719869
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||| || |||||||||||  |||||||||||||    
T  23719917 gagaaagaaatatatgaaaagaaatattaaatgaataaggttattatag 23719869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 33084589 - 33084637
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  33084589 gagagagaaatatatgaaatgagatgttaaataaataaggtcattatag 33084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 34603732 - 34603784
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||  |||||||||| |  |||| |||||||||    
T  34603732 gcagagagagaaatatatgaaatatgatattaaataattaaggatattatagg 34603784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 36408834 - 36408882
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||||||    
T  36408834 gagagagaaatatatgaaatgagatattgaattaataaggtcattatag 36408882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 36423000 - 36423048
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||||||    
T  36423000 gagagagaaatatatgaaatgagatattgaattaataaggtcattatag 36423048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 37502133 - 37502181
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||||  |||||||||||  |||||||||||||    
T  37502133 gagagataaatatatgaaatgtaatattaaatgaataaggttattatag 37502181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 38542408 - 38542376
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||| ||||||||    
T  38542408 agagagaaatatatgaaatgagatgttaaatga 38542376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40412054 - 40412102
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| || ||||||||  ||||| |||||||    
T  40412054 gagagagaaatatatgaaatgaaatgttaaatgaataaggtcattatag 40412102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 44014046 - 44013998
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||||||||||||||| |  ||||| |||||||    
T  44014046 gagagataaatatatgaaatgagatattaaataaataaggtcattatag 44013998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 44217721 - 44217689
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    |||||||||| ||||||||||||||||||||||    
T  44217721 aaaagtgacacttaaaaaggaacggagagagta 44217689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 48782311 - 48782358
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  48782311 gagagagaaatatatgaaat-agatattaaatgaataaggtcattatag 48782358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 52257924 - 52257876
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| |||||||||||||  |||| ||||||||    
T  52257924 gagagaaaaatatatgaaataagatattaaatgactaaggctattatag 52257876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 53467684 - 53467652
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||| ||||||||||||||||||||||||    
T  53467684 agagagaagtatatgaaatgagatattaaatga 53467652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 55703028 - 55703064
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  55703028 gcagagagagaaatatatgaaataagataataaatga 55703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 55935218 - 55935266
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| ||||||| |||||||||||||  |||| ||||||||    
T  55935218 gagagagaaatacatgaaataagatattaaatgactaaggctattatag 55935266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 9e-19; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 37660842 - 37660894
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37660842 gcagagagagaaacatatgaaatgagatattaaatgaggaaggttattatagg 37660894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 15893715 - 15893667
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15893715 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 15893667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 4883708 - 4883759
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  4883708 gcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 4883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 37077275 - 37077326
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  37077275 gcagatagagaaatatatgaaatgagatattaaattatgaaggttattatag 37077326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 11222454 - 11222404
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  11222454 gcagagagagaaatatatgaaatgagatattaaatgaataaggtcattata 11222404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 38148171 - 38148122
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  38148171 agagagagaagtatatgaaatgagatattaaatgatgaaagttattatag 38148122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 479108 - 479060
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  479108 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 479060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10263865 - 10263913
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  10263865 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 10263913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10812307 - 10812355
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  10812307 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 10812355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 14288539 - 14288587
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  14288539 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 14288587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 14541439 - 14541487
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  14541439 gagagagaaatatataaaatgagatattaaatgaataaggttattatag 14541487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 15183136 - 15183088
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  15183136 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 19594458 - 19594506
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  19594458 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 19594506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 26342688 - 26342736
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  26342688 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 26342736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 34399310 - 34399358
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  34399310 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 34399358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 36375681 - 36375729
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  36375681 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 36375729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 523
Target Start/End: Complemental strand, 2758541 - 2758483
Alignment:
Q  465 aaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagtttt 523  Q
    ||||||||||| ||||||||||||| |||||||||| |||| |||| ||||||| ||||    
T  2758541 aaattacactcacctcccttaaggtcttcttaaataacactaacatcccctctaatttt 2758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 28967367 - 28967317
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || |||||||||||||||||||||  ||||||||||||||    
T  28967367 agagagagaagtaaatgaaatgagatattaaatgataaaggttattatagg 28967317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 7529843 - 7529790
Alignment:
Q  10 gcagagagagaaatatatgaaatg-agatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| |||||||||    
T  7529843 gcagagagagaaatatatgaaatgaaaatattaaatgatgaaggctattatagg 7529790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 36404969 - 36404928
Alignment:
Q  20 aaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  36404969 aaatatatgaaatgagatattaaatgaataaggttattatag 36404928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 38072361 - 38072328
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  38072361 gagagagaaatatatgaaatgagatattaaatga 38072328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 41885733 - 41885766
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  41885733 gagagagaaatatatgaaatgagatattaaatga 41885766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 2012969 - 2013017
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| ||||||||||| |  |||||||||||||    
T  2012969 gagagagaaatatatgaaataagatattaaattactaaggttattatag 2013017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 3363692 - 3363740
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  3363692 gagagagaaatatatgaaatgagatattaaatcaataaggtcattatag 3363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 3376409 - 3376365
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||||||||||||  || |||||||||    
T  3376409 agagaaatatatgaaatgagatattaaatgaataatgttattata 3376365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4654827 - 4654875
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  4654827 gagagagaaatgtatgaaatgagatattaaatgaataaggtcattatag 4654875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 13001046 - 13000998
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  13001046 gagagagaaatatatgaaatgagatattaaataaataaggctattatag 13000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 14308501 - 14308549
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  14308501 gagagataaatatatgaaatgagatattaaatgaataaggtcattatag 14308549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 30264737 - 30264689
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  30264737 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 30264689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 34721570 - 34721618
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| | |||||||||||  |||||||||||||    
T  34721570 gagagagaaatatatgaaataatatattaaatgactaaggttattatag 34721618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 37093555 - 37093591
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||| |||||||||||||||||||||||||||||||    
T  37093555 gcagaaagagaaatatatgaaatgagatattaaatga 37093591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 38186187 - 38186139
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||||  ||||| |||||||    
T  38186187 gagaaagaaatatatgaaatgagatattaaatgaataaggtcattatag 38186139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 14295891 - 14295844
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  14295891 agagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 14295844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 15677426 - 15677379
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  15677426 gagagagaaatatatgaaatgtgatattaaatgaataaggtcattata 15677379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 29041966 - 29041931
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtat 163  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29041966 ctaaaagtgacaattaaaaaggaacggagcgagtat 29041931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 44360541 - 44360588
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  44360541 gagagagaaatatatgaaataagatattaaatgaataaggtcattata 44360588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 25558319 - 25558273
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||  ||||| |||||||    
T  25558319 gagagatatatatgaaatgagatattaaatgaataaggtcattatag 25558273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 28145707 - 28145674
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||| ||||||||||||||||||||||||    
T  28145707 gagagagaattatatgaaatgagatattaaatga 28145674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 34357289 - 34357334
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| ||||||||||||||||||  ||||| |||||||    
T  34357289 agagaaatatataaaatgagatattaaatgaataaggtcattatag 34357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 928167 - 928119
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||| ||||||  ||||||||||  ||||||||||||||    
T  928167 agagagaaatatattaaatgaagtattaaatgattaaggttattatagg 928119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 9706895 - 9706943
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||| ||||||||||| ||||||  |||||||||||||    
T  9706895 gagagataaatatataaaatgagatatcaaatgaataaggttattatag 9706943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 11560181 - 11560149
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||| |||||||||||||||||    
T  11560181 agagagaaatatatgcaatgagatattaaatga 11560149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13754063 - 13754111
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||| |||| |||||||||||  |||| ||||||||    
T  13754063 gagagagaaatatatgacatgaaatattaaatgaataaggctattatag 13754111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13965715 - 13965763
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||| ||||||||  ||||| |||||||    
T  13965715 gagagagaaatatattaaatgagatgttaaatgaacaaggtcattatag 13965763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 19594363 - 19594331
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  19594363 aaaagtgacaattaaaaaggaacggagggagta 19594331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 25787446 - 25787494
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||  ||||||||||  |||| |||||||||    
T  25787446 agagagaaatatatgaaatgaagtattaaatgattaaggatattatagg 25787494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 31025075 - 31025027
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| |||||||||||||  |||| ||||||||    
T  31025075 gagagataaatatatgaaataagatattaaatgactaaggctattatag 31025027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 77196 - 77244
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  77196 gagagagaaatatatgaaatgagatattaaatgaataaggttattatag 77244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 7056273 - 7056225
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7056273 gagagagaaatatatgaaatgagatattaaatgaccaaggttattatag 7056225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 32251087 - 32251035
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  32251087 gcagagagagaaatatatgaaatgaggtattaaatgattaaggttattatagg 32251035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 3621695 - 3621731
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  3621695 gcagagagagaaatatatgaaatgagatattaaatga 3621731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 19812063 - 19812111
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||    
T  19812063 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattata 19812111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 23777404 - 23777452
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  23777404 gagagagaaatatatgaaatgaaatattaaatgaataaggttattatag 23777452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 17124116 - 17124070
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  17124116 gagagaaatatatgaaatgagatattaaatgaataaggtcattatag 17124070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 26485816 - 26485770
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||    
T  26485816 gagagaaatatatgaaatgaaatattaaatgaataaggttattatag 26485770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 373831 - 373864
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  373831 gagagagaaatatatgaaatgagatattaaatga 373864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 24663487 - 24663520
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  24663487 gagagagaaatatatgaaatgagatattaaatga 24663520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 1252274 - 1252322
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  1252274 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 1252322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 7235548 - 7235596
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||  |||||||||||||||||||||||||  |||||||||||||    
T  7235548 gagagagggatatatgaaatgagatattaaatgaataaggttattatag 7235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 9838255 - 9838207
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| ||||||||||||||||||||||||||||  |||| ||||||||    
T  9838255 gagagggaaatatatgaaatgagatattaaatgaataaggctattatag 9838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 17193266 - 17193314
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||| |||||||||||||||||||||||||  ||||| |||||||    
T  17193266 gagagagatatatatgaaatgagatattaaatgaataaggtcattatag 17193314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17601273 - 17601225
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  17601273 gagagagaaatatatgtaatgagatattaaataaataaggttattatag 17601225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 17836001 - 17836049
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  17836001 gagagagaaatatatgaaatgatatattaaatgaataaggtcattatag 17836049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 26470856 - 26470808
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  26470856 gagagagaaatatatgaaatgagatgttaaatgaacaaggtcattatag 26470808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 52771 - 52818
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  52771 gagagagaaatatatgaaataagatattaaatgaataaggtcattata 52818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 1751567 - 1751516
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| |||||||||||||| ||||||||||||||  ||||| |||||||    
T  1751567 gcagagaaagaaatatatgaaaagagatattaaatgaataaggtcattatag 1751516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 22050156 - 22050203
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  22050156 gagagagaaatatatgaaataagatattaaatgaataaggtcattata 22050203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 24356281 - 24356315
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||||| |||||    
T  24356281 ctaaaagtgacaattaaaaaggaacggagggagta 24356315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 364675 - 364642
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||| |||||||||||    
T  364675 gagagagaaatatatgaaatgaaatattaaatga 364642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 1249647 - 1249680
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||| |||||||||||    
T  1249647 gagagagaaatatatgaaatgaaatattaaatga 1249680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 2381238 - 2381271
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    |||||||||||||| |||||||||||||||||||    
T  2381238 aaaagtgacaattataaaggaacggagagagtat 2381271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 12732283 - 12732316
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||| |||||||||||    
T  12732283 gagagagaaatatatgaaatgaaatattaaatga 12732316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 15432779 - 15432828
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||| ||||||||||||||| ||||||||| |  ||||||||||||||    
T  15432779 gagagataaatatatgaaatgaaatattaaattattaaggttattatagg 15432828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 30237089 - 30237134
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| |||||||||||||||| |  |||||||||||||    
T  30237089 agagaaatatataaaatgagatattaaattaataaggttattatag 30237134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 30388829 - 30388862
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  30388829 gagagagaaatatatgaaataagatattaaatga 30388862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 31854623 - 31854574
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| ||||||||||||| |||||||||||||  |||| ||||||||    
T  31854623 agagagataaatatatgaaataagatattaaatgactaaggctattatag 31854574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 8992656 - 8992704
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||| ||||||||  ||||| |||||||    
T  8992656 gagagataaatatatgaaatgagatgttaaatgaataaggtcattatag 8992704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 9017103 - 9017151
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||| ||||||||  ||||| |||||||    
T  9017103 gagagataaatatatgaaatgagatgttaaatgaataaggtcattatag 9017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 11000941 - 11000893
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||  ||||||||||  |||| |||||||||    
T  11000941 agagagaaatatatgaaatgaagtattaaatgattaaggatattatagg 11000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13597517 - 13597565
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||| |||||||||||||||||||||   |||||||||||||    
T  13597517 gagaaagaaatttatgaaatgagatattaaatgtaaaaggttattatag 13597565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 23923846 - 23923798
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||||||||||||| |||  ||||| |||||||    
T  23923846 gagagaaaaatatatgaaatgagatattaactgaataaggtcattatag 23923798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 38002938 - 38002998
Alignment:
Q  465 aaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagttttta 525  Q
    ||||||||||| |||||||| |||| ||||||||||||||| |||| ||||||||||||||    
T  38002938 aaattacactcacctccctttaggttttcttaaatagcactaacatcccctctagttttta 38002998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 43500611 - 43500662
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  43500611 gcagagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 43500662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 11248887 - 11248936
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  11248887 cagagagagaaatatatgaaatgagatattacatgatgaaggttactata 11248936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12124752 - 12124800
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  12124752 gagagagaaatatatgaaatgagatattaaatgaataagattattatag 12124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13566787 - 13566835
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  13566787 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 13566835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 13699282 - 13699330
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  13699282 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 13699330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18033955 - 18033907
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  18033955 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 18033907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 29830861 - 29830909
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  29830861 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 29830909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 30686519 - 30686567
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  30686519 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 30686567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 37609430 - 37609382
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  37609430 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 37609382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 525
Target Start/End: Complemental strand, 38003667 - 38003607
Alignment:
Q  465 aaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagttttta 525  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||  ||||||| ||||||    
T  38003667 aaattacactcacctcccttaaggtcttcttaaatagcactaacaacccctctacttttta 38003607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 38597699 - 38597747
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  38597699 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 38597747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 45368196 - 45368244
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  45368196 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 45368244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 9362082 - 9362129
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||    
T  9362082 agagagaaatatatgaaataagatattaaatgactaaggttattatag 9362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 20605753 - 20605706
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  20605753 gagagagaaatatatgaaatgagatattaaatgaataaggtcattata 20605706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 35483909 - 35483862
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||    
T  35483909 agagagaaatatatgaaatgagatattaaatgaataaggtcattatag 35483862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 51974299 - 51974252
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||    
T  51974299 agagagaaatatatgaaatgaaatattaaatgaataaggttattatag 51974252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 10506921 - 10506967
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||    
T  10506921 gagagaaatatatgaaatgagatattaaatgaataaggctattatag 10506967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 1024664 - 1024697
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  1024664 gagagagaaatatatgaaatgagatattaaatga 1024697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 1677306 - 1677339
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  1677306 gagagagaaatatatgaaatgagatattaaatga 1677339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 9127776 - 9127825
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||||||||    
T  9127776 agagagagaaatatatgaagtgaaatattaaatgaataaggttattatag 9127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 8464386 - 8464338
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  8464386 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 8464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10676010 - 10676058
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||||||||||||||| |  |||||||||||||    
T  10676010 gagagagaaatatataaaatgagatattaaataaataaggttattatag 10676058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 12231200 - 12231152
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  12231200 gagagagaaatatatgaaatgggatattaaatgaataaggtcattatag 12231152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19349508 - 19349460
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  19349508 gagagataaatatatgaaatgagatattaaatgaataaggtcattatag 19349460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24781863 - 24781815
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  24781863 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 24781815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 28679129 - 28679177
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||    
T  28679129 gagagagaaatatatcaaatgagatattaaatgaataaggtcattatag 28679177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 32168535 - 32168571
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtata 164  Q
    ||||||||||||||||||||||||||||| |||||||    
T  32168535 ctaaaagtgacaattaaaaaggaacggagggagtata 32168571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32994598 - 32994550
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  32994598 gagagagaaatatatgaaatgagatgttaaatgaataaggtcattatag 32994550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 35700504 - 35700456
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||||||    
T  35700504 gagaaagaaatatatgaaatgagatattaaatgaataaggctattatag 35700456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 44818563 - 44818595
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||||    
T  44818563 agagagaaatatatgaaatgagatattaaatga 44818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 48508241 - 48508289
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  48508241 gagagagaaatatatgtaatgagatattaaataaataaggttattatag 48508289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 50825701 - 50825653
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  50825701 gagagagaaatatatgaaatgagatgttaaatgaataaggtcattatag 50825653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 51972413 - 51972377
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||| |||||||||||||||||||||||||||    
T  51972413 gcagagagataaatatatgaaatgagatattaaatga 51972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 2572076 - 2572127
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||| |||||||||||||||| ||||||||| |  |||||||||||||    
T  2572076 gcagagagtgaaatatatgaaatgaaatattaaataattaaggttattatag 2572127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 13507878 - 13507909
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaat 44  Q
    ||||||||||||||||||||||||||||||||    
T  13507878 gagagagaaatatatgaaatgagatattaaat 13507909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 13515066 - 13515097
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaat 44  Q
    ||||||||||||||||||||||||||||||||    
T  13515066 gagagagaaatatatgaaatgagatattaaat 13515097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 39412643 - 39412592
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  39412643 gcagagagagaaatatatgaaatgagatgttaaattaataaggtcattatag 39412592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 45226703 - 45226673
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||    
T  45226703 agagaaatatatgaaatgagatattaaatga 45226673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 51613425 - 51613387
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtatatt 166  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  51613425 ctaaaagtgacaattaaaaaggaatggagggagtatatt 51613387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 52749125 - 52749171
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||| |||||||||||||  ||| |||||||||    
T  52749125 gagagaaatatatgaaataagatattaaatgaataagattattatag 52749171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 37609526 - 37609559
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    |||||||||| |||||||||||||||||||||||    
T  37609526 aaaagtgacacttaaaaaggaacggagagagtat 37609559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 37735363 - 37735396
Alignment:
Q  129 taaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  37735363 taaaagtgacagttaaaaaggaacggagagagta 37735396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 1038097 - 1038057
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtatatttt 168  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  1038097 ctaaaagtgacaattaaaaaggaacgggggaagtatatttt 1038057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 1045003 - 1044963
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagtatatttt 168  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  1045003 ctaaaagtgacaattaaaaaggaacgggggaagtatatttt 1044963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 1427788 - 1427820
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||| |||||||||||||    
T  1427788 agagagaaatatatgaaataagatattaaatga 1427820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 1429392 - 1429440
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||  ||||||||||||||||||  ||||| |||||||    
T  1429392 gagagagaaatatacaaaatgagatattaaatgaataaggtcattatag 1429440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 2059941 - 2059893
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| |||||||||||||  ||||| |||||||    
T  2059941 gagagaaaaatatatgaaataagatattaaatgaataaggtcattatag 2059893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 5598163 - 5598211
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| | |||||||||||  ||||| |||||||    
T  5598163 gagagagaaatatatgaaataaaatattaaatgaataaggtcattatag 5598211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19929595 - 19929547
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  19929595 gagagagaaatatatgaaatgagatgttaaattaataaggtcattatag 19929547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 21927825 - 21927777
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||| |||||| |||||||||||  ||||| |||||||    
T  21927825 gagagagaaatatataaaatgaaatattaaatgaataaggtcattatag 21927777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 32348086 - 32348130
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttatt 57  Q
    |||| |||||||||| ||||||||||||||||||  |||||||||    
T  32348086 gagaaagaaatatataaaatgagatattaaatgaataaggttatt 32348130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 38648565 - 38648613
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| |||||||||||||||||||||| ||||||  ||||| |||||||    
T  38648565 gagaaagaaatatatgaaatgagatatcaaatgaataaggtcattatag 38648613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 43952896 - 43952944
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||| ||||||||  ||||| |||||||    
T  43952896 gagagagaaatatatgaaatgcgatgttaaatgaataaggtcattatag 43952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 48265165 - 48265117
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||| ||||||| |  |||||||||||||    
T  48265165 gagagagaaatatatgtaatgagacattaaataaataaggttattatag 48265117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 49497260 - 49497308
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||||||| ||||||||||||  ||||| |||||||    
T  49497260 gagagataaatatatgaaatgtgatattaaatgaataaggtcattatag 49497308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 14384 - 14334
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  14384 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattatagg 14334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 96195 - 96145
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  96195 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattatagg 96145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 96077 - 96040
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtatattt 167  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  96077 aaaagtgacaattaaaaaggaacggagggagtatattt 96040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 252701 - 252751
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||| || ||||||||||||||||||||| |||||||||||||||    
T  252701 agagagagaagtaaatgaaatgagatattaaatgatgaaggttattatagg 252751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 252819 - 252852
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagtat 163  Q
    ||||||||||||||||||||||||||| ||||||    
T  252819 aaaagtgacaattaaaaaggaacggagggagtat 252852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 252606 - 252574
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  252606 aaaagtgacaattaaaaaggaacggagggagta 252574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 23771394 - 23771443
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  23771394 agagagagaaatacatgaaataagatattaaatgatgaaggttattatag 23771443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 45101496 - 45101447
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  45101496 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatagg 45101447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 53055338 - 53055387
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  53055338 agagagataaatatatgaaatgagatattaaatgataaaggttattatag 53055387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 19550354 - 19550402
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  19550354 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 19550402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 28885786 - 28885834
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  28885786 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 28885834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 40010802 - 40010754
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  40010802 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 40010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 41168869 - 41168917
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  41168869 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 41168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 43775528 - 43775480
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  43775528 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 43775480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 45513753 - 45513705
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  45513753 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 45513705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 49123631 - 49123679
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  49123631 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 49123679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 50092053 - 50092101
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  50092053 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 50092101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 52663550 - 52663598
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  52663550 gagagagaaatatatgaaatgagatattaaatgaataaggtcattatag 52663598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 5244076 - 5244025
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||||||||||    
T  5244076 gcagagagagaaatatatggaataagatattaaatgactaaggttattatag 5244025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 13168123 - 13168158
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  13168123 cagagagagaaatatatgaaatgagatattaaatga 13168158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 24981395 - 24981446
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  24981395 gcagagagagaaatatatgaaatgatatattaaatgaataaggtcattatag 24981446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 41351331 - 41351284
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||    
T  41351331 agagagaaatatatgaaatgaaatattaaatgaataaggttattatag 41351284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 42672031 - 42671980
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| ||||||||||||||||| |||||||||||||  |||||||||||||    
T  42672031 gcagaaagagaaatatatgaaataagatattaaatgaataaggttattatag 42671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 54106372 - 54106419
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||    
T  54106372 agagagaaatatatgaaatgagatattaaatgaataaggtcattatag 54106419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 54898224 - 54898177
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  54898224 gagagagaaatatatgaaatgagatattaaatgaataaggtcattata 54898177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 27483924 - 27483878
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  27483924 gagagaaatatatgaaatgagatattaaatgaataaggtcattatag 27483878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 51697700 - 51697654
Alignment:
Q  15 gagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||    
T  51697700 gagagaaatatatgaaatgagatattaaatgaataaggtcattatag 51697654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 3376443 - 3376394
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  3376443 agagagaaaaatatatgaaatgagatattaaatgaataaggtcattatag 3376394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 29651776 - 29651809
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  29651776 gagagagaaatatatgaaatgagatattaaatga 29651809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 47069995 - 47069962
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  47069995 gagagagaaatatatgaaatgagatattaaatga 47069962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 47955221 - 47955282
Alignment:
Q  462 ggtaaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagtttt 523  Q
    |||||||||||||| |||||||| | || ||||||||||||||| |||  ||||||||||||    
T  47955221 ggtaaattacactcacctcccttgaagttttcttaaatagcactaacaccccctctagtttt 47955282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 51244732 - 51244765
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||    
T  51244732 gagagagaaatatatgaaatgagatattaaatga 51244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 53055713 - 53055746
Alignment:
Q  129 taaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||||||||||    
T  53055713 taaaagtgacaattaaaaaggaacggagagagta 53055746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24202 - 24154
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  24202 gagaaagaaatatatgaaatgaaatattaaatgaataaggttattatag 24154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 8237033 - 8236985
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| |||||||||||||  |||||||||||||    
T  8237033 gagagaaaaatatatgaaattagatattaaatgaacaaggttattatag 8236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 27039744 - 27039696
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||||    
T  27039744 gagagagaaatatatgaaataagatattaaatgaataaggctattatag 27039696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 27992348 - 27992396
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||    
T  27992348 gagagagaaatatatgaaatgaaatattaaatgaataaggtcattatag 27992396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 29458341 - 29458293
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  29458341 gagagagaaatatatgtaatgagatattaaataaataaggttattatag 29458293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32854086 - 32854038
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| | |||||||||||  |||||||||||||    
T  32854086 gagagagaaatatatgaaataaaatattaaatgactaaggttattatag 32854038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33074416 - 33074368
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||||    
T  33074416 gagagagaaatatatgtaatgagatattaaataaataaggttattatag 33074368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33491277 - 33491229
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||| |||||||||||||||||||||||||| |  |||||||||||||    
T  33491277 gagagtgaaatatatgaaatgagatattaaataaataaggttattatag 33491229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 34266574 - 34266530
Alignment:
Q  17 gagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||    
T  34266574 gagaaatatatgaaatgagatattaaatgaataaggtcattatag 34266530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 40139972 - 40139924
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  40139972 gagagagaaatatatgaaataagatattaaatgaataaggtcattatag 40139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 43945488 - 43945520
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||||||||||||||||    
T  43945488 agagagaaatatatgaaatgagatattaaatga 43945520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 522
Target Start/End: Complemental strand, 47956181 - 47956121
Alignment:
Q  462 ggtaaattacactcgcctcccttaaggtattcttaaatagcactgacattccctctagttt 522  Q
    |||||||||||||| |||| ||| |||| ||||||||||||||| |||  |||||||||||    
T  47956181 ggtaaattacactcacctctcttgaggtcttcttaaatagcactaacaccccctctagttt 47956121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 7328563 - 7328610
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||    
T  7328563 gagagagaaatatatgaaatgagatgttaaatgaataaggtcattata 7328610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 6902384 - 6902434
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||||||| ||||||||| |  ||||| |||||||    
T  6902384 cagagagagaaatatatgaaatgaaatattaaataaataaggtcattatag 6902434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 32980747 - 32980781
Alignment:
Q  12 agagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||| |||||||||||||    
T  32980747 agagagagaaatatatgaaataagatattaaatga 32980781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 44544155 - 44544117
Alignment:
Q  23 tatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  44544155 tatatgaaatgagatattaaatgaaaaaggttattatag 44544117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 47104387 - 47104421
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||||| |||||    
T  47104387 ctaaaagtgacaattaaaaaggaacggagggagta 47104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 2642819 - 2642856
Alignment:
Q  22 atatatgaaatgagatattaaatgaggaaggttattat 59  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  2642819 atatatgaaataagatattaaatgatgaaggttattat 2642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 11473513 - 11473558
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| |||||||||| |||||||||||||  |||||||||||||    
T  11473513 agagaagtatatgaaataagatattaaatgactaaggttattatag 11473558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 20105300 - 20105333
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||| ||||||||||||    
T  20105300 gagagagaaatatatgaaatgggatattaaatga 20105333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 27028153 - 27028120
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  27028153 gagagagaaatatatgaaataagatattaaatga 27028120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 28943672 - 28943639
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  28943672 gagagagaaatatatgaaataagatattaaatga 28943639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 30861680 - 30861647
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  30861680 gagagagaaatatatgaaataagatattaaatga 30861647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 41425737 - 41425782
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttatta 58  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||    
T  41425737 gagagagaaatatatgtaatgagatattaaataaataaggttatta 41425782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 48152096 - 48152141
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||| ||||||||||| ||||||  |||||||||||||    
T  48152096 agagaaatatataaaatgagatatcaaatgaataaggttattatag 48152141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 53282087 - 53282120
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  53282087 gagagagaaatatatgaaataagatattaaatga 53282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 55141607 - 55141566
Alignment:
Q  20 aaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||| ||||||||||||||||||  |||||||||||||    
T  55141607 aaatatataaaatgagatattaaatgaataaggttattatag 55141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 2642927 - 2642959
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  2642927 aaaagtgacaattaaaaaggaacggagggagta 2642959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 13158577 - 13158529
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||| ||||||| |||||||||||  ||||| |||||||    
T  13158577 gagagagaaatataagaaatgatatattaaatgaataaggtcattatag 13158529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 17102865 - 17102909
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattata 60  Q
    |||||||||||||||||||||| ||||||||  ||||| ||||||    
T  17102865 agagaaatatatgaaatgagatgttaaatgaataaggtcattata 17102909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 34750760 - 34750812
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||||||||||||||||||||||   ||||||| |  ||||||||||||||    
T  34750760 gcagagagagaaatatatgaaatgaagcattaaataattaaggttattatagg 34750812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 39866987 - 39866939
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| |||||| |  ||||| |||||||    
T  39866987 gagagagaaatatatgaaatgagatgttaaattaacaaggtcattatag 39866939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 42671551 - 42671503
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| ||||||||||||||| |  || ||||||||||    
T  42671551 gagagagaaatatatgtaatgagatattaaataaataaagttattatag 42671503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 53745419 - 53745372
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  53745419 gagagagaaatatatgaaatg-gatattaaatgaataaggtcattatag 53745372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 54911435 - 54911391
Alignment:
Q  17 gagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||    
T  54911435 gagaaatatatgaaataagatattaaatgaataaggtcattatag 54911391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 1950 - 1902
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||    
T  1950 gagagagaaatatatgaaataagatattaaatgactaaggttattatag 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 138865 - 138830
Alignment:
Q  11 cagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  138865 cagagagagaaatatatgaaatgagatattaaatga 138830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 369512 - 369560
Alignment:
Q  14 agagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    ||||||||||||||||||||| |||||||||||  || |||||||||||    
T  369512 agagagaaatatatgaaatgaaatattaaatgataaaagttattatagg 369560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 148411 - 148459
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||| ||||||| |||||||||||  ||||| |||||||    
T  148411 gagagagaaatataagaaatgatatattaaatgaataaggtcattatag 148459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 23244 - 23293
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatagg 62  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||||||    
T  23244 gagagaaaaatatataaaatgagatattaaatgataaaggttattatagg 23293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 23362 - 23394
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  23362 aaaagtgacaattaaaaaggaacggagggagta 23394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 100 - 52
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||| ||||||||  ||||| |||||||    
T  100 gagagagaaatatatgaaatgagatgttaaatgaataaggtcattatag 52  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 8259 - 8295
Alignment:
Q  10 gcagagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||| |||||||||||||||||||||||||||||    
T  8259 gcagagaaagaaatatatgaaatgagatattaaatga 8295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 14854 - 14821
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    ||||||||||||||||| ||||||||||||||||    
T  14854 gagagagaaatatatgacatgagatattaaatga 14821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 69208 - 69241
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatga 46  Q
    |||||||||||||||||||| |||||||||||||    
T  69208 gagagagaaatatatgaaataagatattaaatga 69241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 419622 - 419577
Alignment:
Q  16 agagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    ||||||||||||||||||||||||||||| |  ||| |||||||||    
T  419622 agagaaatatatgaaatgagatattaaataaataagattattatag 419577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4623 - 4671
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||||||||||||||||| ||||||||||| |  ||||| |||||||    
T  4623 gagagagaaatatatgaaataagatattaaataaataaggtcattatag 4671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 3034 - 3066
Alignment:
Q  130 aaaagtgacaattaaaaaggaacggagagagta 162  Q
    ||||||||||||||||||||||||||| |||||    
T  3034 aaaagtgacaattaaaaaggaacggagggagta 3066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 184260 - 184212
Alignment:
Q  13 gagagagaaatatatgaaatgagatattaaatgaggaaggttattatag 61  Q
    |||||| ||||||||||||| |||||||||||||  |||| ||||||||    
T  184260 gagagataaatatatgaaataagatattaaatgactaaggctattatag 184212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 147355 - 147383
Alignment:
Q  128 ctaaaagtgacaattaaaaaggaacggag 156  Q
    |||||||||||||||||||||||||||||    
T  147355 ctaaaagtgacaattaaaaaggaacggag 147383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1219 times since January 2019
Visitors: 4365