View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0701_low_9 (Length: 312)

Name: NF0701_low_9
Description: NF0701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0701_low_9
NF0701_low_9
[»] chr4 (24 HSPs)
chr4 (30-312)||(16384485-16384767)
chr4 (29-312)||(33898291-33898573)
chr4 (30-312)||(18600942-18601224)
chr4 (30-312)||(23399478-23399760)
chr4 (32-312)||(25117451-25117731)
chr4 (30-312)||(28019898-28020180)
chr4 (30-297)||(15161785-15162033)
chr4 (62-259)||(19182997-19183195)
chr4 (30-140)||(10724964-10725074)
chr4 (30-140)||(10938733-10938843)
chr4 (30-285)||(15699619-15699873)
chr4 (67-169)||(9069682-9069783)
chr4 (68-142)||(15623201-15623274)
chr4 (91-205)||(33746621-33746736)
chr4 (97-141)||(10718241-10718285)
chr4 (97-141)||(10932010-10932054)
chr4 (113-168)||(19660155-19660210)
chr4 (97-141)||(10683013-10683057)
chr4 (97-141)||(10896653-10896697)
chr4 (97-141)||(49975014-49975058)
chr4 (94-136)||(41786204-41786246)
chr4 (96-141)||(10197596-10197641)
chr4 (97-138)||(10723056-10723097)
chr4 (97-138)||(10936825-10936866)
[»] scaffold0185 (1 HSPs)
scaffold0185 (30-312)||(1650-1932)
[»] chr1 (19 HSPs)
chr1 (30-312)||(13165989-13166271)
chr1 (43-312)||(26971693-26971960)
chr1 (30-312)||(20840546-20840828)
chr1 (30-304)||(4246639-4246917)
chr1 (30-312)||(20200371-20200651)
chr1 (31-307)||(11667186-11667462)
chr1 (30-195)||(9452118-9452283)
chr1 (54-304)||(24986586-24986836)
chr1 (91-240)||(22891144-22891293)
chr1 (30-151)||(13150048-13150169)
chr1 (96-228)||(12753739-12753871)
chr1 (152-259)||(15803541-15803648)
chr1 (62-229)||(17850742-17850908)
chr1 (64-142)||(10339476-10339553)
chr1 (30-144)||(25349512-25349625)
chr1 (30-167)||(1626313-1626449)
chr1 (64-229)||(23477253-23477416)
chr1 (91-141)||(51471434-51471484)
chr1 (97-141)||(22347972-22348016)
[»] chr3 (28 HSPs)
chr3 (28-312)||(24196120-24196404)
chr3 (30-312)||(17135427-17135709)
chr3 (30-312)||(18482655-18482937)
chr3 (30-312)||(13791272-13791554)
chr3 (30-312)||(23953840-23954122)
chr3 (30-312)||(7028353-7028635)
chr3 (30-312)||(15572288-15572567)
chr3 (30-312)||(1918526-1918808)
chr3 (30-312)||(13514900-13515183)
chr3 (94-312)||(19634475-19634692)
chr3 (54-295)||(18063513-18063754)
chr3 (130-312)||(18548243-18548424)
chr3 (30-207)||(20626924-20627102)
chr3 (113-307)||(296041-296235)
chr3 (54-260)||(28051789-28051991)
chr3 (54-148)||(21547542-21547636)
chr3 (64-168)||(286217-286320)
chr3 (98-259)||(21253347-21253508)
chr3 (91-209)||(17042103-17042215)
chr3 (69-139)||(6578871-6578940)
chr3 (252-312)||(44453077-44453137)
chr3 (89-142)||(3551820-3551873)
chr3 (64-142)||(979698-979775)
chr3 (91-141)||(31650450-31650500)
chr3 (91-139)||(214438-214486)
chr3 (97-141)||(8225849-8225893)
chr3 (97-141)||(18477860-18477904)
chr3 (91-141)||(15674181-15674231)
[»] chr6 (40 HSPs)
chr6 (30-312)||(17235189-17235471)
chr6 (30-310)||(33666388-33666666)
chr6 (30-312)||(9280992-9281274)
chr6 (30-312)||(23879480-23879762)
chr6 (30-312)||(17855790-17856072)
chr6 (30-312)||(13195919-13196201)
chr6 (30-309)||(19893950-19894231)
chr6 (30-312)||(21722690-21722971)
chr6 (30-267)||(25970317-25970554)
chr6 (30-267)||(25974757-25974994)
chr6 (30-312)||(13869686-13869966)
chr6 (30-312)||(19077738-19078016)
chr6 (87-312)||(17527223-17527448)
chr6 (30-312)||(21705812-21706094)
chr6 (30-312)||(20989072-20989354)
chr6 (30-307)||(20653669-20653947)
chr6 (73-312)||(19172010-19172248)
chr6 (30-307)||(12038991-12039267)
chr6 (30-307)||(17863756-17864033)
chr6 (30-307)||(8464949-8465230)
chr6 (157-312)||(19100492-19100647)
chr6 (30-204)||(19168149-19168323)
chr6 (156-307)||(20465302-20465453)
chr6 (78-295)||(25806020-25806236)
chr6 (62-229)||(15930163-15930329)
chr6 (62-259)||(23882013-23882209)
chr6 (30-148)||(11992303-11992421)
chr6 (169-312)||(12028564-12028707)
chr6 (62-148)||(12385173-12385258)
chr6 (30-229)||(29252961-29253163)
chr6 (30-111)||(19100671-19100752)
chr6 (28-123)||(20465192-20465288)
chr6 (91-228)||(24542333-24542470)
chr6 (82-142)||(19598446-19598506)
chr6 (263-312)||(25969935-25969984)
chr6 (263-312)||(25974375-25974424)
chr6 (30-84)||(17525618-17525672)
chr6 (97-142)||(34639555-34639600)
chr6 (91-139)||(28624579-28624627)
chr6 (96-139)||(11961237-11961280)
[»] scaffold0129 (1 HSPs)
scaffold0129 (30-303)||(16109-16382)
[»] scaffold0103 (1 HSPs)
scaffold0103 (30-312)||(24960-25242)
[»] chr5 (23 HSPs)
chr5 (30-312)||(22251323-22251605)
chr5 (30-312)||(24190458-24190740)
chr5 (30-311)||(22404043-22404324)
chr5 (30-312)||(23419839-23420121)
chr5 (30-312)||(23757539-23757821)
chr5 (30-312)||(23822995-23823277)
chr5 (111-309)||(22245722-22245920)
chr5 (100-312)||(9421868-9422080)
chr5 (30-307)||(22081974-22082250)
chr5 (87-285)||(30605030-30605228)
chr5 (30-307)||(26037378-26037654)
chr5 (30-312)||(38405956-38406237)
chr5 (236-312)||(25104948-25105024)
chr5 (236-312)||(25164041-25164117)
chr5 (30-115)||(22240260-22240345)
chr5 (29-105)||(9420636-9420712)
chr5 (30-192)||(23624557-23624717)
chr5 (30-228)||(20714026-20714222)
chr5 (54-260)||(26328523-26328727)
chr5 (178-229)||(18221787-18221838)
chr5 (64-142)||(13941332-13941409)
chr5 (91-141)||(22183661-22183711)
chr5 (93-141)||(20127705-20127753)
[»] scaffold0024 (1 HSPs)
scaffold0024 (30-312)||(159666-159948)
[»] scaffold0059 (1 HSPs)
scaffold0059 (30-312)||(47673-47956)
[»] chr2 (12 HSPs)
chr2 (30-312)||(12911087-12911369)
chr2 (30-312)||(24789441-24789723)
chr2 (30-312)||(23759219-23759501)
chr2 (114-312)||(22611486-22611684)
chr2 (54-227)||(15329001-15329172)
chr2 (64-209)||(21531076-21531220)
chr2 (30-118)||(22614329-22614417)
chr2 (64-142)||(21249515-21249592)
chr2 (96-141)||(27108209-27108254)
chr2 (91-141)||(24311196-24311246)
chr2 (96-141)||(27111798-27111843)
chr2 (97-141)||(36397839-36397883)
[»] scaffold0453 (1 HSPs)
scaffold0453 (30-303)||(1283-1556)
[»] scaffold0359 (1 HSPs)
scaffold0359 (30-309)||(2488-2766)
[»] scaffold0037 (1 HSPs)
scaffold0037 (30-312)||(109541-109823)
[»] chr8 (13 HSPs)
chr8 (30-312)||(22485728-22486010)
chr8 (30-312)||(23540689-23540971)
chr8 (35-312)||(45136706-45136982)
chr8 (31-307)||(27924735-27925012)
chr8 (54-307)||(33962333-33962586)
chr8 (54-307)||(33977659-33977912)
chr8 (30-295)||(26536898-26537164)
chr8 (64-229)||(18622339-18622503)
chr8 (154-236)||(22476808-22476890)
chr8 (70-169)||(9997235-9997332)
chr8 (30-88)||(22476893-22476951)
chr8 (64-142)||(20254194-20254271)
chr8 (97-141)||(1684721-1684765)
[»] chr7 (30 HSPs)
chr7 (30-312)||(11520693-11520976)
chr7 (30-312)||(645731-646009)
chr7 (34-312)||(16207167-16207445)
chr7 (30-312)||(4459334-4459617)
chr7 (30-309)||(15506828-15507107)
chr7 (37-312)||(15438672-15438946)
chr7 (30-307)||(20992143-20992421)
chr7 (54-307)||(29545447-29545700)
chr7 (30-307)||(12326411-12326689)
chr7 (30-312)||(14165760-14166037)
chr7 (49-290)||(16221874-16222115)
chr7 (30-259)||(14927295-14927521)
chr7 (30-259)||(15350761-15350987)
chr7 (67-169)||(10661600-10661701)
chr7 (54-142)||(23082083-23082170)
chr7 (64-143)||(26132272-26132350)
chr7 (64-142)||(21261195-21261272)
chr7 (156-285)||(16437397-16437525)
chr7 (79-168)||(23960764-23960853)
chr7 (263-312)||(11999476-11999525)
chr7 (89-169)||(42636944-42637024)
chr7 (63-142)||(20924423-20924501)
chr7 (64-142)||(10038047-10038124)
chr7 (267-312)||(11589060-11589105)
chr7 (91-139)||(19295519-19295567)
chr7 (30-142)||(24902871-24902981)
chr7 (91-141)||(24814859-24814909)
chr7 (96-141)||(9567656-9567701)
chr7 (97-142)||(10280609-10280654)
chr7 (113-141)||(15709127-15709155)
[»] scaffold0088 (1 HSPs)
scaffold0088 (49-312)||(37185-37448)
[»] scaffold0226 (3 HSPs)
scaffold0226 (30-307)||(17407-17684)
scaffold0226 (30-307)||(26801-27078)
scaffold0226 (34-307)||(6825-7097)
[»] scaffold0259 (1 HSPs)
scaffold0259 (30-307)||(16608-16885)
[»] scaffold0213 (1 HSPs)
scaffold0213 (30-297)||(7861-8128)
[»] scaffold0190 (1 HSPs)
scaffold0190 (30-307)||(15904-16180)
[»] scaffold0069 (1 HSPs)
scaffold0069 (30-293)||(9288-9551)
[»] scaffold0006 (1 HSPs)
scaffold0006 (30-228)||(88425-88621)
[»] scaffold1001 (1 HSPs)
scaffold1001 (54-209)||(661-814)
[»] scaffold0003 (1 HSPs)
scaffold0003 (156-285)||(27027-27155)
[»] scaffold0035 (1 HSPs)
scaffold0035 (91-138)||(38074-38121)
[»] scaffold0064 (1 HSPs)
scaffold0064 (91-141)||(45311-45361)
[»] scaffold0520 (2 HSPs)
scaffold0520 (96-141)||(5733-5778)
scaffold0520 (96-141)||(11988-12033)
[»] scaffold0480 (1 HSPs)
scaffold0480 (96-141)||(11946-11991)
[»] scaffold0034 (1 HSPs)
scaffold0034 (96-141)||(50258-50303)


Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 16384767 - 16384485
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||     
T  16384767 aaaacaaatatccttgttgtgtaagttgaaaccaatgttccaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctgacaca 16384668  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  16384667 gttcagtgtgcctgggttctcgcctgtttgtacgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaaacaacacgcatatctt 16384568  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16384567 ctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaat 16384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 29 - 312
Target Start/End: Original strand, 33898291 - 33898573
Alignment:
Q  29 aaaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||| ||||||||||||| | ||    
T  33898291 aaaaacaaatatc-ttgttctgtaagttggaaccaatgtttcaacatgtgtttaggcgtctttggaagatgttagatacgatgctccaacatcctcgtac 33898389  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  33898390 ggttcagtatgcctgcgttctcgcctgtatgtacgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatct 33898489  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33898490 tctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaat 33898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 18600942 - 18601224
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  18600942 aaaacaaatatccttgttctgtaagttggaaccaatgtttcaacatgtgtttaggcgtctgtggaagatgttggatacgatgctccaacatcctggcacg 18601041  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  18601042 gttcagtgtgcctgagttctcgcctggttgtatgtgcgccctttattgtttaaggaaacaatatttacttaacttattgatcaagcaacgcgcatatctt 18601141  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||    
T  18601142 ctaagaatcagctgtgaaatatttctaaagtgtattttatactttaggaaatatttattatagtttgaaacgatcctataaat 18601224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23399478 - 23399760
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||    
T  23399478 aaaataaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggcacg 23399577  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||  |    
T  23399578 gtttagtgtgcctgagttctcgcttgtttgtacgcgcgccctttattatttaaggaaacaatatttccttaacttattgatcaagcaacgcacatattat 23399677  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  23399678 ctaagaatcagctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 23399760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 32 - 312
Target Start/End: Complemental strand, 25117731 - 25117451
Alignment:
Q  32 aacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggt 131  Q
    |||||||||||||| | |||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |    
T  25117731 aacaaatatccttgatctgtaagttggaaccaaagtttcaacatgtatttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacgct 25117632  T
Q  132 tcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttct 231  Q
    ||||  ||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||    
T  25117631 tcaggttgcatgagttctcgcctatttgtacgcgcgctctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacattcatatcatct 25117532  T
Q  232 aagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||| ||| |||| ||||||||||||||||||||    
T  25117531 aagaatcggctttggaatatttctaaagtgtattttatattttaagaaatacttaatattttttggaacgatcctataaat 25117451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 28020180 - 28019898
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||| ||||| | |||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||  || ||| |||||||||||||||    
T  28020180 aaaataaataaccttgatctgtaagttggaatcaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgtgatgcttcaacatcctggcacg 28020081  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||  ||||||||| | ||||||| |||| | ||||||||||||||||||| |||||||| ||| |||||||||||| |||||  |||||| |    
T  28020080 gttcagtgtgaatgagttctcacatgtttgttcgcgagccctttattgtttaaggaaataatatttctttaacttattgatcaagcaacgtgcatatcat 28019981  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28019980 ctaagaatcagctataaaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 28019898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 15161785 - 15162033
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |                     
T  15161785 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgttggatacgatg----------------- 15161866  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
      ||||||||||||| ||||  |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  15161867 --ttcagtgtgcctgggttcaagcctatttgtacacgcgccctttattgtttaaggaaacaatatttccttatcttattgaccaagcaacgcacatatct 15161964  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttgg 297  Q
    |   |||||||||| ||||||||||||||||| ||| |||||||||| |||||||||| |||||| ||||    
T  15161965 ttacagaatcagctgtggaatatttctaaagtagta-tttatattttaggaaatatttgttattggttgg 15162033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 19182997 - 19183195
Alignment:
Q  62 caatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc--tgagttctcgcctgtttg 159  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||   |||||||  |||| ||||    
T  19182997 caatgttccaacatgt-tttaggcatctctgtaagatgttggatacgatgttctgacatcctggcacggttcagtgtgcgcatgagttcatgcctatttg 19183095  T
Q  160 tacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaag 259  Q
    ||| ||||  ||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||| | |||||||| | || |||||| ||||||    
T  19183096 tacacgcgctctttattatttaaggaaaccatatttccttatcttcttgaccaaacaacgcacatatcttttcagaatcagttgtgtaatattcctaaag 19183195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 10725074 - 10724964
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  10725074 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatatgtgtaggcatctctgtaagatgttggatacgatgttccaacatcctggcac 10724976  T
Q  129 ggttcagtgtgc 140  Q
     ||| |||||||    
T  10724975 agtttagtgtgc 10724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 10938843 - 10938733
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  10938843 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatatgtgtaggcatctctgtaagatgttggatacgatgttccaacatcctggcac 10938745  T
Q  129 ggttcagtgtgc 140  Q
     ||| |||||||    
T  10938744 agtttagtgtgc 10938733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 285
Target Start/End: Original strand, 15699619 - 15699873
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  ||||||  ||||||||||||||| ||| | || | ||  ||||||||||||| ||| | ||||||||||||||||    
T  15699619 aaaacaaatatccttgtttgtgtt-gttggatgcaatgttccaacatg-gttcaagcatgtccataagatgttggatccgatgttccaacatcctggcac 15699716  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
     ||||||||||||     ||| || |||| |||| |||| | | |||| | ||||||||| |||| | ||||||||||||| |||  ||| | |||||||    
T  15699717 agttcagtgtgccatgtatcttgcatgttagtacacgcgccatatattatataaggaaaccatatattcttatcttattgaccaagaaacacgcatatct 15699816  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatattt 285  Q
    |  | ||||||||||||||||||| |||||||    || ||||||| ||||||||||    
T  15699817 ttaatgaatcagctttggaatattcctaaagttgtgttcatattttaggaaatattt 15699873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 9069783 - 9069682
Alignment:
Q  67 ttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgc 166  Q
    ||||||||||| ||| ||| | ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||  |||| ||||||| |||    
T  9069783 ttccaacatgt-tttcggcatttctgtaagatgttggatacgatgttccaacatcctggaacggttcagtgtgcctgatttcatgcctatttgtactcgc 9069685  T
Q  167 gtc 169  Q
    |||    
T  9069684 gtc 9069682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 15623274 - 15623201
Alignment:
Q  68 tccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||| ||||||| | ||||||||||||||||||||| | |||||||||||||||||||| ||| |||||    
T  15623274 tccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcctggcacggttaagtatgcct 15623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 33746736 - 33746621
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttca-gtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaaca 189  Q
    |||| |||||||||||||| | || ||||||||||| ||||||| ||||| ||| ||||  ||||  ||||| ||||| | | |||| |||||||||||     
T  33746736 tgtatgatgttggatacgatgttctaacatcctggcgcggttcaagtgtgtctgggttcatgcctacttgtatgcgcgccttgtattatttaaggaaacc 33746637  T
Q  190 atatttccttatctta 205  Q
    ||||||||||||||||    
T  33746636 atatttccttatctta 33746621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10718285 - 10718241
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  10718285 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 10718241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10932054 - 10932010
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  10932054 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 10932010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 19660210 - 19660155
Alignment:
Q  113 tccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgt 168  Q
    ||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||||    
T  19660210 tccaacatcgtggcatggttcagtgtgcctgagttcatgcctatttgtacgcgcgt 19660155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10683057 - 10683013
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  10683057 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 10683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10896697 - 10896653
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  10896697 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 10896653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 49975058 - 49975014
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||    
T  49975058 atgttggatacgatgttccaacatcctggcacgattcagtgtgcc 49975014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 41786246 - 41786204
Alignment:
Q  94 aagatgttggatacgacgctccaacatcctggcacggttcagt 136  Q
    ||||||||||||| || | ||||||||||||||||||||||||    
T  41786246 aagatgttggatatgatgttccaacatcctggcacggttcagt 41786204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 10197596 - 10197641
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||| || | ||||||||| |||||||||||||||||||    
T  10197596 gatgttggatatgatgttccaacatcttggcacggttcagtgtgcc 10197641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 10723097 - 10723056
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgt 138  Q
    ||||||||||||| | ||||||||| ||||||||||||||||    
T  10723097 atgttggatacgatgttccaacatcttggcacggttcagtgt 10723056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 10936866 - 10936825
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgt 138  Q
    ||||||||||||| | ||||||||| ||||||||||||||||    
T  10936866 atgttggatacgatgttccaacatcttggcacggttcagtgt 10936825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 1650 - 1932
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||    
T  1650 aaaacaaatatccctgttctgtaagttgaaaccaatgtttcaacatgtgtttaggcgtctttgtaagatgttggatacgatgttccaacattctggcacg 1749  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  1750 gttcagtgtgcctgagttctcgcctatttgtatgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaaccaacgcgcatatctt 1849  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1850 ctaagaatcagctgtggaatatttataaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 13166271 - 13165989
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||| |||    
T  13166271 aaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggtacg 13166172  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |    
T  13166171 gttcagtgtgcctgagttctcgcctgtatgtaagcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcacatatcat 13166072  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13166071 ctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaat 13165989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 26971693 - 26971960
Alignment:
Q  43 ttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26971693 ttgttttgtaagttggaactaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacggttcagtgtgcct 26971792  T
Q  143 gagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagct 242  Q
    |||||||||||| |||||||||||   ||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  26971793 gagttctcgcctatttgtacgcgct--ctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatcttctaagaatcagct 26971890  T
Q  243 ttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     | ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||    
T  26971891 gttgaatatttctaaagtgtattttatattttagaaaatatttaatattgtttggaaccatcctataaat 26971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 20840546 - 20840828
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||| |||     
T  20840546 aaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatatgtttaggcatctctgtaagatgttggatacgatgttccaacatcctgacaca 20840645  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||| ||||  |||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||     
T  20840646 gttcagtgtgcctgagttcttgcctacttgtacacgcgccctttattgtttaatgaaataatatttccttatcttattgatcaagcaacgcgcatatcta 20840745  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
      || |||||| | |||||||||||||||||  |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  20840746 taaaaaatcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat 20840828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 30 - 304
Target Start/End: Complemental strand, 4246917 - 4246639
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatac--gacgctccaacatcctggc 126  Q
    ||||||||||||||||| | |||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||  |||||||||||||||    
T  4246917 aaaacaaatatccttgtatgtgtt-gttggaaccaatgtttcaacatgtgtttagacgtctctgtaagatgttggatacacgatcctccaacatcctggc 4246819  T
Q  127 acggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatat 226  Q
    | |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||    
T  4246818 atggtttagtgtgcctgagttctcgcctgtatgtacgcgtgtcctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacacgcatat 4246719  T
Q  227 cttctaagaatcagc--tttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatc 304  Q
    |||||||||||||||  | |||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||||||    
T  4246718 cttctaagaatcagcgttgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatc 4246639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 20200371 - 20200651
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  20200371 aaaacaaatatccttgttgtataagttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgttggatacgatgttccaacatcctggcacg 20200470  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||| ||||||||| ||  |||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| |    
T  20200471 gttcagtatgcctgagtactttcctacttgtacgcgcgccctttattgtttaaggaaacaatatttcc-tatcttattgatcaagcaacgcgcatatc-t 20200568  T
Q  230 ctaa-gaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||| ||||||| | |||||||||||||||||  | |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  20200569 ctaaggaatcagttgtggaatatttctaaagtaga-tttatattttaggaaatatttgttattggttggaacgatcctataaat 20200651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 307
Target Start/End: Original strand, 11667186 - 11667462
Alignment:
Q  31 aaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||| ||||||     
T  11667186 aaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttagacatctctgtaagatgttggatacgatgttccaacatcatggcaca 11667284  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| |||||| ||| ||||  |||| ||||||||||   ||||||||||||||||||| | ||||||||||||||||||| ||| |||||| ||||||||    
T  11667285 gttaagtgtgtctgggttcatgcctatttgtacgcggaccctttattgtttaaggaaaaactatttccttatcttattgaccaagcaacgcgcatatctt 11667384  T
Q  230 ctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
       ||||| || | ||||||||||||||||| ||| |||||||||| |||||||||| ||||||||| | |||||||||    
T  11667385 tacagaataagttgtggaatatttctaaagtagta-tttatattttaggaaatatttgttattgttttggacgatccta 11667462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 9452283 - 9452118
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||     
T  9452283 aaaacaaatatccttgttctgtaagttggaaccgaagtttcaacatgtgtttaggcgtctctataagatgttggatacgatgctccaacattctggcaca 9452184  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatattt 195  Q
    |||||||||||||| ||||||||||  ||||||||||| || |||||||||||||||| |||||||    
T  9452183 gttcagtgtgcctgggttctcgcctacttgtacgcgcgcccgttattgtttaaggaaataatattt 9452118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 304
Target Start/End: Complemental strand, 24986836 - 24986586
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | |||||||| |||||||||||||||||| | | ||||   ||    
T  24986836 gttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgttggatacaatgttccaacattctggcacggttcagtgtgaccgtgttcatacc 24986737  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
    | |||||| | ||  ||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||     | |||||| | ||||||||||    
T  24986736 tatttgtatgtgcaccctttattgtttaaggaaacaatattttcttatcttattgaccaagcaacgcgcatatccatacaaaatcagttgtggaatattt 24986637  T
Q  254 ctaaagtgtattttatatttttggaaatatttattattgtttggaacgatc 304  Q
    |||||||    |||||||||| |||||||||| || |||||| ||||||||    
T  24986636 ctaaagtaatatttatattttaggaaatatttgtttttgttttgaacgatc 24986586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 22891144 - 22891293
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaa 190  Q
    |||||| |||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  22891144 tgtaagttgttggatactatgttccaacatcctggcacggttcagtgtgcctgagttcttgcctacttgtacgcgcgtcctttattgtttaaggaaacaa 22891243  T
Q  191 tatttccttatcttattgatcaaacaacgcacatatcttctaagaatcag 240  Q
    |||||||||| |||||||| ||| |||| ||||||||||  |||||||||    
T  22891244 tatttccttaacttattgaccaagcaacacacatatctttgaagaatcag 22891293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 13150169 - 13150048
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||    
T  13150169 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggcacg 13150070  T
Q  130 gttcagtgtgcctgagttctcg 151  Q
    ||||||||||||||||||||||    
T  13150069 gttcagtgtgcctgagttctcg 13150048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 12753871 - 12753739
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatattt 195  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||| ||||  ||||  ||||||||||  | |  ||| ||||||||||| ||||||    
T  12753871 gatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgggttcgagcctacttgtacgcgcaccttgaattatttaaggaaaccatattt 12753772  T
Q  196 ccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||||||||| ||| |||||| |||||||    
T  12753771 ccttatcttattgaccaagcaacgcgcatatct 12753739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 15803541 - 15803648
Alignment:
Q  152 cctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatat 251  Q
    |||||||||| ||||| | |||||| ||||||||||| |||||||||||||||||||| ||||||| || ||||||||   |||||||| | ||||||||    
T  15803541 cctgtttgtatgcgcgccttttattatttaaggaaaccatatttccttatcttattgaccaaacaatgcgcatatctttacagaatcagttatggaatat 15803640  T
Q  252 ttctaaag 259  Q
    | ||||||    
T  15803641 tcctaaag 15803648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 17850742 - 17850908
Alignment:
Q  62 caatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgta 161  Q
    |||||||||||||||| || || | ||| |||||||| |||||||| | | |||||||||||  ||||||||||||||||| |||||  |   ||||||     
T  17850742 caatgttccaacatgt-ttcagtcatctttgtaagattttggatacaatgttccaacatcctaacacggttcagtgtgccttagttcatgttagtttgtg 17850840  T
Q  162 cgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    || |||   | |||| ||||||||||| |||||||||||||||||||| ||| |||||| ||||||||    
T  17850841 cgtgcgctttatattatttaaggaaaccatatttccttatcttattgaccaagcaacgcccatatctt 17850908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 10339476 - 10339553
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||| | ||||||||| || |||||||||||||||||    
T  10339476 atgttccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcttgacacggttcagtgtgcct 10339553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 25349512 - 25349625
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||| ||||| |||  ||||||  |||||||||||||||| ||||||| | | |||||||||||||||| ||   |||||||||||||||     
T  25349512 aaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-tttaggcatttatgtaagatgttggatatgatattccaacatcctggcat 25349609  T
Q  129 ggttcagtgtgcctga 144  Q
    ||||||||||||||||    
T  25349610 ggttcagtgtgcctga 25349625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 1626449 - 1626313
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  ||||||  |||| ||||||||||| |||| || | |||||||||||||||||| || | ||||||||||||| ||    
T  1626449 aaaacaaatatccttgtttatgtt-gttggatacaatattccaacatgt-tttatgcatttctgtaagatgttggatatgatgttccaacatcctggaac 1626352  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcg 167  Q
     ||||||||||||||  |||  ||||  |||||||||||    
T  1626351 agttcagtgtgcctggtttcatgcctacttgtacgcgcg 1626313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 23477253 - 23477416
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctc-gcctgtttgtac 162  Q
    |||||||||||||| || |||| ||| ||||  |||||| |||| | | ||||||||| |||||||||||| |||||||| ||| |  |||| |||||||    
T  23477253 atgttccaacatgt-ttcaggcatctttgtataatgttgaatacaatgttccaacatcttggcacggttcaatgtgcctg-gttgtatgcctatttgtac 23477350  T
Q  163 gcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    || || |   |||| ||||||||||| | |||||||||||||||||| ||| |||||  ||||||||    
T  23477351 gc-cgcctaatattatttaaggaaaccacatttccttatcttattgaccaagcaacgtgcatatctt 23477416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 51471434 - 51471484
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| ||||||||||| || | |||||||||||||||||||||||||||||    
T  51471434 tgtacgatgttggatatgaagttccaacatcctggcacggttcagtgtgcc 51471484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 22347972 - 22348016
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | || |||||| |||||||||||||||||||    
T  22347972 atgttggatacgatgttctaacatcttggcacggttcagtgtgcc 22348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 28 - 312
Target Start/End: Complemental strand, 24196404 - 24196120
Alignment:
Q  28 caaaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggca 127  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||    
T  24196404 caaaaacaaatatccttgttttctaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctggca 24196305  T
Q  128 cggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatc 227  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||    
T  24196304 cggttcagtgtgcctgagttctcgcctgtttgtatgcgcatcctttattgtttaaggaaacaatatttccttaatttattgatcaagcaacgcgcatatc 24196205  T
Q  228 ttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  24196204 atctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 24196120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 17135427 - 17135709
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  17135427 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgctccaacatcctggcacg 17135526  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||| |||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  17135527 gttcggtgtgcctgagttctcgcctctatgtacgcgcgccttttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatctt 17135626  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  17135627 ctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 17135709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 18482655 - 18482937
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||| ||||    
T  18482655 aaaacaaatatcattgttctgtaagttggaaccaaagttccaatatgtgtttaggcgtctctgtaagatgttggatacgatgtttcaacatcctgacacg 18482754  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  18482755 gttcagtgtgtctgagttctcgcctgtttgtacgcgcaccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacgcgcatatctt 18482854  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  18482855 ctaagaatcaattgtggaatatttctaaagtgtattttatattttaggaaatatttattcttgtttggaacgatcctataaat 18482937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 13791554 - 13791272
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||| | ||| |||||||||| || |    
T  13791554 aaaacaaatatccttgttctgtaagttgaaaccaatgtttcaacatgtgtttagacgtctctggaagatgttggatacaatgcttcaacatcctgacatg 13791455  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13791454 gttcaatgtgcctgagttctcgcctgtttgtacgcgcgccctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 13791355  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | |||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  13791354 ctaagaatcagttgtggaatatttctaaagtaaatattatattttaggaaatatttattattgtttggaacaatcctataaat 13791272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23953840 - 23954122
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||| |||||||| ||||| |  |||||||||||| |||||    
T  23953840 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacgtgtgtttaggcgtctctggaagatgttagatacaatcctccaacatcctagcacg 23953939  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |    
T  23953940 gttcagtgtgcctgagttctcgcttgtttatacgtgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaaacaacgcgcatgtcat 23954039  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  23954040 ctaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatactataaat 23954122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 7028353 - 7028635
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||    
T  7028353 aaaacaaatatctttgttctgtaagttggaaccaaagtgccaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacattttggcacg 7028452  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||| |||||||||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |    
T  7028453 gttcagtgtgactgagttctcgcctatttgtacgtgcgccctttattatttaaggaaacaatatttccttatcttattgatcaagcaacgcgcatatcat 7028552  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    || |||||||||  | ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  7028553 ctgagaatcagccgtagaatatttctaaagtgtattttatattttaggaaatattttatattgtttggaacgatcctataaat 7028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 15572288 - 15572567
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | ||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||| |||||| |||||  ||||| |    
T  15572288 aaaacaaatatccttgatctgtaagttggaaccaatgttcaaa---gtgtttaggcgtctctgtaagatgttggatacaacgctctaacatgttggcaag 15572384  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||| ||| || ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  15572385 gttcagtgtgcctgagttatcggctatttgtacgcacaccctttattgtttaaggaaacaatatttccttatcttattgatcaaccaacgcgtatatctt 15572484  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15572485 ctaagaatcatctgtggaatatttcaaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaat 15572567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 1918526 - 1918808
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||  ||||||| ||||||||| || ||| ||| ||||||||| |||||    
T  1918526 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttagaggtctctggaagatgttgtatgcgatgcttcaacatcctagcacg 1918625  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |    
T  1918626 gttcagtgtgcctgagttctcgcatgtttgtacgtgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatcat 1918725  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||  | | | |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||    
T  1918726 ctaagaattcgttgtagaatatttttaaagtgtattttatattttaggaaatatttaatattgtttggaagggtcctataaat 1918808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 13514900 - 13515183
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||| |||||    
T  13514900 aaaacaaatatcctcgatgtgtaagttggaaccaatgttccaacatgtgtttaagcatctctgtaagatgttggatacgatgttccaacatcctagcacg 13514999  T
Q  130 gttcagtgtgcctgagtt-ctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||| |||||| || ||||  |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  13515000 gttcagtgtgcttgagttacttgcctacttgtgcgtgcgccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacgcgcatatct 13515099  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
        |||||||| | ||||||||||| |||||  |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  13515100 atacagaatcagttgtggaatatttcaaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat 13515183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 94 - 312
Target Start/End: Complemental strand, 19634692 - 19634475
Alignment:
Q  94 aagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctg-tttgtacgcgcgtcctttattgtttaaggaaacaata 192  Q
    |||||| |||||| || ||||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||| || |||||||||  ||||||||||    
T  19634692 aagatgctggatatgatgctccaacaacctggcacggttcagtgtgcctgagttctcacctggtttgtacgtgcgcccgttattgttttcggaaacaata 19634593  T
Q  193 tttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattg 292  Q
    |||||||| |||| ||||||| ||||||   ||||||||||||||||||| |||||||||||||||||  || ||||||||| |||||||||||||||||    
T  19634592 tttccttaacttactgatcaagcaacgcg--tatcttctaagaatcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattg 19634495  T
Q  293 tttggaacgatcctataaat 312  Q
    ||||||| ||| ||||||||    
T  19634494 tttggaatgattctataaat 19634475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 54 - 295
Target Start/End: Original strand, 18063513 - 18063754
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    ||||||||||||||| |||| | || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||    
T  18063513 gttggaaccaatgtttcaacgtatgattaggcatctttgtaagatgttggatacgacgttccaacatcctggcacggttcagtgtgccttggttcttgcc 18063612  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttcta-agaatcagctttggaatatt 252  Q
    | | |||||| ||| | || |||||||||||||||||||||||||||||||||||| ||| |||| | ||||| ||||| ||||||||||  ||||||||    
T  18063613 tatatgtacgtgcgcctttcattgtttaaggaaacaatatttccttatcttattgaccaagcaacacgcatat-ttctacagaatcagctgaggaatatt 18063711  T
Q  253 tctaaagt-gtattttatatttttggaaatatttattattgttt 295  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||||    
T  18063712 tctaaagtagta-tttatattttaggaaatatttaatattgttt 18063754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 130 - 312
Target Start/End: Complemental strand, 18548424 - 18548243
Alignment:
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||| ||||||||||||||||| |||||| | |||  |||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  18548424 gttcagtatgcctgagttctcgcctatttgtatgtgcgctctttat-gtttaaggacacaatatttccttatcttattgatcaagcaacggacatatctt 18548326  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     ||||||||| || |||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18548325 ttaagaatcaactgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctgtaaat 18548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 20626924 - 20627102
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| | | ||||||||||||||||    
T  20626924 aaaacaaatatccttgtatgtgtaagttggaatcaatgttccaacatgtgtttaggcatctctgtaagatattggatacaatgttccaacatcctggcac 20627023  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttatt 207  Q
    |||| |||||| ||| ||||  ||||  ||||| |  || |||||||||||||||||||||||||||||||||||||||    
T  20627024 ggtttagtgtgtctgggttcatgcctacttgtatgtacgccctttattgtttaaggaaacaatatttccttatcttatt 20627102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 307
Target Start/End: Complemental strand, 296235 - 296041
Alignment:
Q  113 tccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatca 212  Q
    ||||| ||||||||||||||||||||||||| ||||  || | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  296235 tccaaaatcctggcacggttcagtgtgcctgggttcatgcatatttgtacgtgcgccctttattgtttaaggaaacaatatttccttatcttattgacca 296136  T
Q  213 aacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    | |||| | | ||||||   ||||||||   ||||||||| |||||||    |||||||||| |||||||||| ||||||||| | |||||||||    
T  296135 agcaacacgcgtatctttacagaatcagaggtggaatattcctaaagttgcatttatattttaggaaatatttgttattgttttggacgatccta 296041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 260
Target Start/End: Complemental strand, 28051991 - 28051789
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||  |||||| || |||   |||    
T  28051991 gttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgttggatacgatgttccaacatcctggcacggttttgtgtgcatgcgtttatgcc 28051892  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
        | |||||||| |   ||||  |||||||||||||||||||||||| |||||| |||||||||| | ||||||   |||||||| | |||||||||     
T  28051891 ----tatacgcgcgcctaatattacttaaggaaacaatatttccttatcctattgaccaaacaacgcgcgtatctttacagaatcagttgtggaatattc 28051796  T
Q  254 ctaaagt 260  Q
    |||||||    
T  28051795 ctaaagt 28051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 21547636 - 21547542
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttc 148  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | |||||| ||||| ||| |||||||||| ||||||||    
T  21547636 gttggaaccaatgttccaacatgtgtttatgcatctctataagatgttggatacgatgttccaacttcctgacacagttcagtgtgtctgagttc 21547542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 286217 - 286320
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacg 163  Q
    |||||||||||||| || |||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||   |||  || ||||||||||    
T  286217 atgttccaacatgt-ttcaggcatctctgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtgtcttgtttcatgcatgtttgtacg 286315  T
Q  164 cgcgt 168  Q
    |||||    
T  286316 cgcgt 286320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 259
Target Start/End: Original strand, 21253347 - 21253508
Alignment:
Q  98 tgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttcc 197  Q
    |||| ||||||| | |||||||||||| |||||||||||||||||   |||  ||||||||||||||| |   | |||| |||||| || | ||||||||    
T  21253347 tgttagatacgatgttccaacatcctgacacggttcagtgtgccttgtttcatgcctgtttgtacgcgtgctttatattatttaagaaacccatatttcc 21253446  T
Q  198 ttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaag 259  Q
    |||||||||||| ||| |||| | ||||||||   |||||||| | || |||||| ||||||    
T  21253447 ttatcttattgaccaagcaacacgcatatctttacagaatcagttgtgtaatattcctaaag 21253508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 17042103 - 17042215
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaa 190  Q
    |||| |||||||||||||| | ||| ||||||||||||||||||||||||||| ||||  |||      ||| |||| | | |||| ||||||||||| |    
T  17042103 tgtatgatgttggatacgatgttccgacatcctggcacggttcagtgtgcctgggttcatgcc------tacacgcgccttatattatttaaggaaacca 17042196  T
Q  191 tatttccttatcttattga 209  Q
    |||||||||||||||||||    
T  17042197 tatttccttatcttattga 17042215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 6578871 - 6578940
Alignment:
Q  69 ccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtg 139  Q
    ||||||||| ||||||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  6578871 ccaacatgt-tttaggcatttctgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtg 6578940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 44453137 - 44453077
Alignment:
Q  252 ttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||  |||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  44453137 ttctaaagtagattttatattttaggaaatatttattattggttggaacaatcctataaat 44453077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 3551820 - 3551873
Alignment:
Q  89 tctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||||||    
T  3551820 tctgtaagatgttggatatgatgttccaacatcgtggcacggttcagtgtgcct 3551873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 979698 - 979775
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||| | ||||||  | |||||||||||||||||| || | |||||||||  |||||||||||||||||||    
T  979698 atgttccaacatat-tttaggtatttctgtaagatgttggatatgatgttccaacatctcggcacggttcagtgtgcct 979775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 31650500 - 31650450
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||||||||    
T  31650500 tgtatgatgttggatacgacgttccaacatcttggcaccgttcagtgtgcc 31650450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 214438 - 214486
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtg 139  Q
    |||| |||||||||||||| | ||||||||| |||||||||||||||||    
T  214438 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 214486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 8225893 - 8225849
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  8225893 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 8225849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 18477904 - 18477860
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  18477904 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 18477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 15674181 - 15674231
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||||||||| |  |||||||| |||||| ||||||||||||    
T  15674181 tgtaagatgttggatacgatgtcccaacatcttggcacagttcagtgtgcc 15674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 17235471 - 17235189
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17235471 aaaacaaatatctttgttttgtaagttggaatcaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgatgctccaacatcctggcacg 17235372  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||    
T  17235371 gttcagtgtgcctgagttctcgcatgtttgtacgcgcgcccgttattgtttaaggaaacaatatttccttaacttattgatcaagcaacacgcatatctt 17235272  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | ||||||||||||||| |  || ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  17235271 ctaagaatcagatgtggaatatttctaaattagatattatattttaggaaatatttattattgtttggaatgatcctataaat 17235189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 310
Target Start/End: Complemental strand, 33666666 - 33666388
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| || |||||||||||||||||||    
T  33666666 aaaacaaatatccttgat--gtaagttggaaccaatgtttcaacatgtgtttaggcgtctttggaagatgttggatatgatgctccaacatcctggcacg 33666569  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||    
T  33666568 gttcagtgtgcctgagttctcgcctgtttttacgcgcaccctttattgtttaaggaaacaatatttccttatcttattgatcaagtaacgcgcataactt 33666469  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataa 310  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33666468 ctaagaatcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataa 33666388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 9280992 - 9281274
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  9280992 aaaacaaatattcttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctgaaagatgttggatatgatgctccaacatcctggcacg 9281091  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
     |||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||||| |||||||||||| |||||| |||||| |    
T  9281092 attcagtgtgcctgagttctcgcctgtttgtacacgcgcccttcattgtttaagaaaacaatatttccttaacttattgatcaagcaacgcgcatatcat 9281191  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    | ||||||||||| || ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  9281192 caaagaatcagctgtgaaatatttctaaagtgtattttatgttttaggaaatatttattattgtttagaacgatcctataaat 9281274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 23879762 - 23879480
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | | |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  23879762 aaaacaaatatccttgatctataagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacg 23879663  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||| || ||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||| |    
T  23879662 gttcagtgtgcctgagttttcacctgtttgtacacgcaccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacacgcatatcat 23879563  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  23879562 ctaagaatcagttgtggaatatttctaaagtgtattttatattttgggaaatatttaatattgtttggaacgatcctataaat 23879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 17856072 - 17855790
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | |||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||| ||| ||| ||||||||| |||||    
T  17856072 aaaacaaatatccttgatctgtaagttggaatcaaagttccaacatttgtttaggcgtctctggaagatgttggatgcgatgcttcaacatcctagcacg 17855973  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||| || |||||||||| ||  ||||||||||||||||||||||||||| |||| |||||||||||| ||| || ||||||||    
T  17855972 gttcagtgtgcctgagttcttgcttgtttgtacgtgcaccctttattgtttaaggaaacaatattttcttaacttattgatcaagcaatgcgcatatctt 17855873  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17855872 ctaagaatcagctgtggaatatttcgaaagtgtattttatattttaggaaatatttattattgttcggaacgatcctataaat 17855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 13196201 - 13195919
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| | |||||||||||||||||    
T  13196201 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttagacatctctataagatgttggatacgatgttccaacatcctggcacg 13196102  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||| ||||  ||||  |||||   ||| |||||||||||||||||||||||||||  |||||| || |||||| |||||| ||||||||    
T  13196101 gttcagtgtgcctgggttcatgcctacttgtatatgcgccctttattgtttaaggaaacaatatttgtttatctaatggatcaagcaacgcgcatatctt 13196002  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| |||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13196001 ctaagaatcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctataaat 13195919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 30 - 309
Target Start/End: Original strand, 19893950 - 19894231
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| | | |||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  19893950 aaaacaaatatccttgttctgtaagttggaaccaaagattcaacatgtgtttaggcatctctggaagatgttggatacgatgctccaacatcttggcacg 19894049  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||| ||||||||| ||||| ||| || ||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  19894050 gttcagtgtgcctgaattctcgcctttttgtgcgcacgacctttattgcttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatctt 19894149  T
Q  230 c--taagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctata 309  Q
    |  ||||||  || | ||||||||||||||||||||||||| ||| | | |||||||||||||||||| |||||||||||||    
T  19894150 ctataagaaagagttgtggaatatttctaaagtgtattttacattatagaaaatatttattattgttttgaacgatcctata 19894231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 21722690 - 21722971
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||| | | ||||||||||||||| |    
T  21722690 aaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtggttaggcaactctgtaagatgttggatacaatgttccaacatcctggcatg 21722789  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||| ||||| |||| | ||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||  ||||||| ||||| |    
T  21722790 gttcagtgtgcctgggttcttgcctatatgt-cgcgcgccctttattgtttaaggaaacaatctttccttatcttattgaccaggcaacgcatatatcat 21722888  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| | |||||||||||||||  || ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  21722889 ctaagaatcagctgtagaatatttctaaagtagatattatattttaggaaatatttattattatttggaacgatcctataaat 21722971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 30 - 267
Target Start/End: Complemental strand, 25970554 - 25970317
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  25970554 aaaacaaatatctttgttctataagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatatgatgctccaacatcttggcacg 25970455  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||| || ||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||  || |||||| ||||| ||    
T  25970454 gttcagtgtgcctgagttgtcacctgtttgtgcgtgcgccctttattgtttaaggaaacaatatttccttaacttattgactaagcaacgcgcatatttt 25970355  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtatttt 267  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25970354 ctaagaatcagctgtggaatatttctaaagtgtatttt 25970317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 30 - 267
Target Start/End: Complemental strand, 25974994 - 25974757
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  25974994 aaaacaaatatctttgttctataagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatatgatgctccaacatcttggcacg 25974895  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||| || ||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||  || |||||| ||||| ||    
T  25974894 gttcagtgtgcctgagttgtcacctgtttgtgcgtgcgccctttattgtttaaggaaacaatatttccttaacttattgactaagcaacgcgcatatttt 25974795  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtatttt 267  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25974794 ctaagaatcagctgtggaatatttctaaagtgtatttt 25974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 13869686 - 13869966
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||| | |   |||||||||||||||||    
T  13869686 aaaacaaatatccttgat--gtaagttggaaccaatgtttcaacatgtgtttaggcatctttgtaagatgttggatgcaattttccaacatcctggcacg 13869783  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||| ||||||||||||| | |||||| ||  ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||    
T  13869784 gttcagtgtgcttgagttctcgcctatatgtacgtgcaccctttattgtttaaggacacaatatttccttatcttattgatcaagcaacacgcatatctt 13869883  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||| || | |||||||||||||||||  || ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  13869884 ctaagaattagttgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttagaacgatcctataaat 13869966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 19078016 - 19077738
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||| |||| | |||||||||||||    |||||||||||||||||||| | | ||||||||||||||||||| | ||||||||| |||||||    
T  19078016 aaaacaaatattcttgatgtgtaagttggaac----gttccaacatgtgtttaggcatgtttgtaagatgttggatacgatgttccaacatcttggcacg 19077921  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||| ||  ||||   |||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||    
T  19077920 gttcagtgtgcctgagctcatgcctacatgtacgtgcgcccttcattgtttaaggaaacaatatttccttatattattgatcaagcaacacgcatatctt 19077821  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  19077820 ctaagaatcagctgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatactataaat 19077738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 87 - 312
Target Start/End: Original strand, 17527223 - 17527448
Alignment:
Q  87 tctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaa 186  Q
    |||||| |||||||||||||||| || |||| |||||||||||||||||||||| |||||||||||||||||  || |||| ||||||||||||||| ||    
T  17527223 tctctggaagatgttggatacgatgccccaatatcctggcacggttcagtgtgcttgagttctcgcctgtttccacacgcgccctttattgtttaagtaa 17527322  T
Q  187 acaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatattta 286  Q
    |||||||||||||| |||||||||||| |||||| |||||| ||||||||||| || || ||||||||||||||||||||||||||||  ||||||||||    
T  17527323 acaatatttccttaacttattgatcaagcaacgcgcatatcatctaagaatcaactgtgaaatatttctaaagtgtattttatattttaagaaatattta 17527422  T
Q  287 ttattgtttggaacgatcctataaat 312  Q
     |||||||||||||||||||||||||    
T  17527423 atattgtttggaacgatcctataaat 17527448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 21705812 - 21706094
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||  |||| ||||||||||||||| | | ||||| ||| ||||| |    
T  21705812 aaaacaaatatccttgttctctaagttggaaccaaagttccaacatgtggttaggcaactctataagatgttggatacaatgttccaatatcttggcatg 21705911  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
     ||||||||||||| ||||| |||| | | || ||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||  ||||| |    
T  21705912 cttcagtgtgcctgggttcttgcctatatttatgcgcgccctttattgtttaagtaaacaatatttccttatcttattgaccaagcaacgcgtatatcat 21706011  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | |||||||||||||||||  || ||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  21706012 ctaagaatcagttgtggaatatttctaaagtagatattatattttaggaaatatttattattatttggaatgatcctataaat 21706094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 20989072 - 20989354
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||| |||| | ||||||||||||| || |||||||||||||||||||| ||| |||||||| |||||||||| | || ||||||||  ||||    
T  20989072 aaaacaaatattcttgctgtgtaagttggaacaaaagttccaacatgtgtttaggcatctatgtaagatattggatacgatgttcaaacatcctcacacg 20989171  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||| ||  ||||  ||||  ||||||| |||  ||||||||| |||||||||||||||||||| ||||||||||| | |||||| ||||||||    
T  20989172 gttcagtgtgtcttggttcatgcctacttgtacgagcgcgctttattgtataaggaaacaatatttccttttcttattgatctagcaacgcgcatatctt 20989271  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||| | |||||||||||||||||  |||||||||||| |||||||||| |||||| ||||||||||| |||||||    
T  20989272 ctaagaatcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcttataaat 20989354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 20653947 - 20653669
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||| | | ||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||  || | ||||| ||||||| ||    
T  20653947 aaaacaaatatccttatgtgtgtaagttgaaatcaatgttccaacatgtgtttaggcatctctataagatgttggatgtgatgttccaagatcctggaac 20653848  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||| ||| ||||  ||||  || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20653847 ggttcagtgtgtctgggttcatgcctacttttacgcgcgccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacgcacatatct 20653748  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   |||||||||| |||||||||||||||||    ||||||||||  ||||||||| ||||||||| | |||||||||    
T  20653747 ttacagaatcagctgtggaatatttctaaagtaatatttatattttaagaaatatttgttattgttttggacgatccta 20653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 19172248 - 19172010
Alignment:
Q  73 catgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctt 172  Q
    |||||||||| || ||||| ||||||||||| || || |||||||||||||||||||||||| || ||||  ||||  || |  ||||||||||| ||||    
T  19172248 catgtgtttatgcatctctataagatgttgggtatgatgctccaacatcctggcacggttcaatgagcctaggttcatgc-tacttgtacgcgcgccctt 19172150  T
Q  173 tattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatt 272  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||||||||  |||| |||||||||||  ||||||||||    
T  19172149 tattgtttaaggaaacattatttccttatcttattgatcaagtaacgcgcatatcttctaagaatcagctgcggaacatttctaaagtagattttatatt 19172050  T
Q  273 tttggaaatatttattattgtttggaacgatcctataaat 312  Q
    || ||||||||||||||||| |||||||||||||||||||    
T  19172049 ttaggaaatatttattattggttggaacgatcctataaat 19172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 12038991 - 12039267
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||| | | ||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||| | | | ||||||||| ||||||    
T  12038991 aaaacaaatatccttatgtgtgtaagttgaaattaatgttccaacatgtgtttaggcatctctgtaagatgttggatgcaatgttccaacatcttggcac 12039090  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||| ||| ||||  ||||  || |||||||| ||||||||||||  ||||||||||||||||||||||||||| ||| |||| |||||||||    
T  12039091 ggttcagtgtgtctgggttcatgcctacttttacgcgcgccctttattgttt--ggaaacaatatttccttatcttattgaccaagcaacacacatatct 12039188  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   |||||||||| ||||||||||||||||| ||| |||||||||| |||||||||| ||||||||| | |||||||||    
T  12039189 ttacagaatcagctgtggaatatttctaaagtagta-tttatattttaggaaatatttgttattgttttggacgatccta 12039267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 17863756 - 17864033
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||| || | |  |||||| | ||||    
T  17863756 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgtcggatatgatgttttaacatcgtagcac 17863854  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||  |||||| ||||  |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17863855 ggttcagactgcctgggttcatgcctatttgtacgtgcgccctttattgtttaaggaaacaatatttccttatcttattgaccaaacaacgcacatatct 17863954  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   | | |||| | |||||||||||||||||    |||||||||| | |||||||| ||||||||| | |||||||||    
T  17863955 ttacatactcagttgtggaatatttctaaagtaatatttatattttagaaaatatttgttattgttttggacgatccta 17864033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 8464949 - 8465230
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| | | |||||||||||||||||    
T  8464949 aaaataaatatccttgttgtgtaagttggaaccaatgttccaacatgtgtttaggcctctttttaagatgttggatacaatgttccaacatcctggcacg 8465048  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| |||||||||| ||||   |||  ||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||| |||||| |||||||     
T  8465049 gtttagtgtgcctgggttcattcctacttgtacgcgcgccctttattgtttaagaaaacaatagttccttatcttattgaccaagcaacgcgcatatcta 8465148  T
Q  230 ctaagaatcagctttggaatatttctaaagt-gtattt-ta-tatttttggaaatatttatta-ttgtttggaacgatccta 307  Q
        |||||| || ||||||| ||||||||| |||||| || |||||| |||| ||||| ||| ||||| ||||||||||||    
T  8465149 tacggaatcaactgtggaatacttctaaagtagtatttatattattttaggaactatttgttatttgttgggaacgatccta 8465230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 19100647 - 19100492
Alignment:
Q  157 ttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttcta 256  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |    
T  19100647 ttgtacgcgcaccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacacacatatcttctaagaatcagctgtggaatatttcca 19100548  T
Q  257 aagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19100547 aagtagattttatattttaggaaatatttattattggttggaacgatcctataaat 19100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 19168323 - 19168149
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||| ||||| |||||||||||||||||||    
T  19168323 aaaataaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctatagaatgttgggtacgatgctccaacatcctggcacg 19168224  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatctt 204  Q
    ||| |||||||||| ||||  ||||  |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19168223 gtttagtgtgcctgggttcatgcctacttgtacgcgcgttctttattgtttaaggaaataatatttccttatctt 19168149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 156 - 307
Target Start/End: Original strand, 20465302 - 20465453
Alignment:
Q  156 tttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttct 255  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||   |||||||||| ||||||||||||    
T  20465302 tttgtacgcgcgctctttattgtttaaggaaacaatatttccttatcttattgaccaagcaacgcacatatctttacagaatcagctgtggaatatttct 20465401  T
Q  256 aaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    ||||| ||| |||||||||| |||||||||| |||||| ||||||||||||||    
T  20465402 aaagtagta-tttatattttaggaaatatttgttattggttggaacgatccta 20465453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 78 - 295
Target Start/End: Complemental strand, 25806236 - 25806020
Alignment:
Q  78 gtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattg 177  Q
    |||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||  |||||| |||||| | | | || ||||    
T  25806236 gtttaggcatctct-taagatgttggatacgatgttccaacatcctggcacggttcagtgtgtctgggttcatgcctgtatgtacgggtgccattcattg 25806138  T
Q  178 tttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttcta-agaatcagctttggaatatttctaaagtgtattttatatttttg 276  Q
    || ||||||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||||  |  ||||||||| ||||||    |||||||||| |    
T  25806137 ttgaaggaaacaatatttccttatcttattgaccaagcaacgcgcatatc-tctacagaatcaattgaggaatatttttaaagtagcatttatattttag 25806039  T
Q  277 gaaatatttattattgttt 295  Q
    || ||||||| ||||||||    
T  25806038 gagatatttaatattgttt 25806020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 15930163 - 15930329
Alignment:
Q  62 caatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgta 161  Q
    |||||||| ||||||| || |||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||   |||  || ||||||||    
T  15930163 caatgttcaaacatgt-ttcaggcatctctgtaagatattggatacgatgttccaacatcctggcacggttcagtgtgccttgtttcatgcatgtttgta 15930261  T
Q  162 cgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    | |||| | | || | ||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  15930262 cacgcgccttatactatttaaggaaaccatatttccttatcttattgaccaagcaacgcacatatctt 15930329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 23882013 - 23882209
Alignment:
Q  62 caatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgta 161  Q
    ||||||||| |||| | ||||||| ||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||   |||  |||||||||||    
T  23882013 caatgttcctacatat-tttaggcatctttgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtgccttgtttcatgcctgtttgta 23882111  T
Q  162 cgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaag 259  Q
    | || |   | |||| ||||||||||| |||||||||||||||||||| ||| |||||| ||||||||   |||||||| | ||||||||| ||||||    
T  23882112 cacgtgctttatattatttaaggaaaccatatttccttatcttattgaccaagcaacgcgcatatctttatagaatcagttgtggaatattcctaaag 23882209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 11992303 - 11992421
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||| | | | ||||||||| |||||    
T  11992303 aaaacaaatatccttgttctgtaagttggaaccaatgttccaacatgtggttagacaactctgtaagatgttggatacaatgtttcaacatcctagcacg 11992402  T
Q  130 gttcagtgtgcctgagttc 148  Q
     ||||||||||||| ||||    
T  11992403 attcagtgtgcctgggttc 11992421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 312
Target Start/End: Original strand, 12028564 - 12028707
Alignment:
Q  169 cctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtatttta 268  Q
    |||||||||||||||||||||||||||||||||| |||||  ||| |||| | |||||||    |||||||||| |||||||||||||||||  ||||||    
T  12028564 cctttattgtttaaggaaacaatatttccttatcctattgtccaagcaacacgcatatctatacagaatcagctgtggaatatttctaaagtagatttta 12028663  T
Q  269 tatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||| | |||||||| ||||||  |||||||||| |||||||    
T  12028664 tattttggcaaatatttgttattggctggaacgatcttataaat 12028707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 12385173 - 12385258
Alignment:
Q  62 caatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttc 148  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  12385173 caatgttccaacatgt-tttaggcatctctgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgggttc 12385258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 29252961 - 29253163
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgct---ccaacatcctggc 126  Q
    ||||||||||||| |||||   | ||||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||||| |   |||||||||||||    
T  29252961 aaaacaaatatccatgtttgtgatgttggaaccaatgttccaacatg-gttcaggcatgtctttaagatgttggatacgacgatgttccaacatcctggc 29253059  T
Q  127 acggttcagtgtgcctgagttctcgcctgtt-tgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacata 225  Q
    |||||||||||||||     ||| || |||| |||||||||| |   |||| |||||||||||  ||||| ||||||||||||| ||| |||||| ||||    
T  29253060 acggttcagtgtgccatgtatcttgcttgttatgtacgcgcgcctaatattatttaaggaaaccgtattttcttatcttattgaccaagcaacgcgcata 29253159  T
Q  226 tctt 229  Q
    ||||    
T  29253160 tctt 29253163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 19100752 - 19100671
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacg 111  Q
    |||||||||||||||||| | |||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  19100752 aaaacaaatatccttgttctataagttggaatcaaagttccaacatgtgtttaggcatctctataagatgttggatacgacg 19100671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 20465192 - 20465288
Alignment:
Q  28 caaaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcct 123  Q
    ||||||||||||||||||  | || |||||||||| | ||||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||    
T  20465192 caaaaacaaatatccttgaatgtgcaagttggaacaattgttccaacatgtgtttaggcatctctataagatgttggatatgatgttccaacatcct 20465288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 228
Target Start/End: Complemental strand, 24542470 - 24542333
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaa 190  Q
    |||| |||||||||||||| | |||||||| ||||||||||| ||| |||||| ||||  ||||  |||||| |||  |   |||| ||||||||||| |    
T  24542470 tgtatgatgttggatacgatgttccaacattctggcacggtttagtatgcctgggttcatgcctacttgtacacgcacctagtattatttaaggaaacca 24542371  T
Q  191 tatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||||||||||| ||| |||| | |||||||    
T  24542370 tatttccttatcttattgaccaaccaacacgcatatct 24542333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 19598506 - 19598446
Alignment:
Q  82 aggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  19598506 aggcatctctgtaagatgttggatacgatgttccaacatcctgacacggttcagtgtgcct 19598446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 25969984 - 25969935
Alignment:
Q  263 attttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25969984 attttatattttagtaaatatttattattgtttggaacgatcctataaat 25969935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 25974424 - 25974375
Alignment:
Q  263 attttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25974424 attttatattttagtaaatatttattattgtttggaacgatcctataaat 25974375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 17525618 - 17525672
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttagg 84  Q
    |||||||||||||||||| | |||||||||||||| ||| ||| |||||||||||    
T  17525618 aaaacaaatatccttgttctttaagttggaaccaaagtttcaatatgtgtttagg 17525672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 34639555 - 34639600
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||    
T  34639555 atgttggatacgatgttccaacatcttggcacggttcagtgtgcct 34639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 28624627 - 28624579
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtg 139  Q
    |||| |||||||||||||||| | ||||||| |||||||||||||||||    
T  28624627 tgtatgatgttggatacgacgtttcaacatcttggcacggttcagtgtg 28624579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 11961280 - 11961237
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtg 139  Q
    |||||||||||||| | |||||||||||||||||||| ||||||    
T  11961280 gatgttggatacgatgttccaacatcctggcacggtttagtgtg 11961237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 303
Target Start/End: Complemental strand, 16382 - 16109
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  16382 aaaacaaatatccttgttctgtaagttggaaccaaagtttgaacatgtgtttaggcgtctctggaagatgttggatacgatgttccaacatcctggcacg 16283  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  16282 gttcagtgtgcctgagttctcttctgtttgtacgcgcaccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatctt 16183  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgat 303  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16182 ctaagaatcagctatggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgat 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 24960 - 25242
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  24960 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgctccaacatcctggcacg 25059  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||| |||||||||||||||||||  ||| |||||||| |||||||||||||||||| |||| |||||||||||| || |||||||||| |    
T  25060 gttcagtgtgcctaagttctcgcctgtttgtacatgcgccctttattatttaaggaaacaatatttgcttaacttattgatcaagcatcgcacatatcat 25159  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25160 ctaagaatcagctgttgaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 25242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 22251323 - 22251605
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  22251323 aaaacaaatatccttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctttgaaagatgttggatacgatgctccaacatcctggcacg 22251422  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||||| ||||| |||||| |||||| |    
T  22251423 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgccctttatcgtttaaggaaacagtatttccttaacttattaatcaagcaacgcgcatatcat 22251522  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    | |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||    
T  22251523 ccaagaattagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgttttgaacgatcgtataaat 22251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 24190740 - 24190458
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||    
T  24190740 aaaacaaatatccttgttctgtaagttggaactaaagttccaacatgtgtttaggcgtctttggaagatgttggatacgatgctccaacattctggcacg 24190641  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||  ||||| |||||| |    
T  24190640 gttcagtgtgcttgagttctcgcctatttgtacgcgcgccccttattgtttaaggaaacaatatttccttatcatattgatcaagtaacgcgcatatcat 24190541  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  24190540 ctaagaatcagctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattttttggaacgatcctataaat 24190458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 311
Target Start/End: Original strand, 22404043 - 22404324
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||||| |    
T  22404043 aaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtgtttaggcgtctctggaagatgttggatacaatgttccaacatcctggcatg 22404142  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||| || |||| ||||||| |||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||||    
T  22404143 gttcagtatgtctgatttctcgcatgtttgtacgtgcgcccgttattgtttaaggaaacaatatttccttagcttattgatcaagcaaagcgcatatctt 22404242  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaa 311  Q
    |||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22404243 ctaagaatcaactgtgaaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaa 22404324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23419839 - 23420121
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||| ||||||| |||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23419839 aaaacaaatattcttgtttgtgtt-gttggtaccaatgtttcaacatgtgtttaggcgtctctgtaagatgttggatacaatgctccaacatcctggcac 23419937  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||| |||| |||||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  23419938 ggttcaatgtgtctgagttctcgcatgtatgtacgcgcgccctttattggttaaggaaacaatatttccttatcttattgatcaagcaatgcgcatatct 23420037  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||| | |||||||||||||||||   ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  23420038 tctaagaatcagttgtggaatatttctaaagtagtttttatattttaggaaatatttattattggttggaacgatcctataaat 23420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23757539 - 23757821
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| | |||||||||||||||||    
T  23757539 aaaacaaatatcctttatgtgttagttggaaccaatgttccaacatgtgtttaggcatctctatatgatgttggatacgatgttccaacatcctggcacg 23757638  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
     ||||||||| ||  ||||  || |   |||||||||  |||||||||||||||||||||||||||||||||  |||||| ||| |||| ||||||||||    
T  23757639 attcagtgtgtctaggttcatgcatacatgtacgcgcaccctttattgtttaaggaaacaatatttccttattgtattgaccaagcaacacacatatctt 23757738  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
       ||||| |||| |||||||||||||||||  |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  23757739 tggagaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat 23757821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23822995 - 23823277
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| | |||||||||||||||||    
T  23822995 aaaacaaatatcctttatgtgttagttggaaccaatgttccaacatgtgtttaggcatctctatatgatgttggatacgatgttccaacatcctggcacg 23823094  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
     ||||||||| ||  ||||  || |   |||||||||  |||||||||||||||||||||||||||||||||  |||||| ||| |||| ||||||||||    
T  23823095 attcagtgtgtctaggttcatgcatacatgtacgcgcaccctttattgtttaaggaaacaatatttccttattgtattgaccaagcaacacacatatctt 23823194  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
       ||||| |||| |||||||||||||||||  |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  23823195 tggagaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat 23823277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 111 - 309
Target Start/End: Original strand, 22245722 - 22245920
Alignment:
Q  111 gctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgat 210  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||  ||||||| ||||||||||||  ||||||||| |||||||||    
T  22245722 gctccaacatcctggcacggttcagtgtgcccgagttctcgcttgtttgtacccgcgcactttattctttaaggaaacataatttccttaacttattgat 22245821  T
Q  211 caaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctata 309  Q
    ||| |||||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  22245822 caagcaacgcgcatatcatctaagaatcaactatggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctata 22245920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 100 - 312
Target Start/End: Original strand, 9421868 - 9422080
Alignment:
Q  100 ttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttcctt 199  Q
    |||||||||| | ||||||||||| ||||||||||||| ||||| ||||  ||||  ||||||||||| || ||||||||||||||||||||||||||||    
T  9421868 ttggatacgatgttccaacatcctagcacggttcagtgagcctgggttcatgcctacttgtacgcgcgccccttattgtttaaggaaacaatatttcctt 9421967  T
Q  200 atcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaa 299  Q
    |||||||||||||| |||  | ||||||||||||||||||||| || |||||||||||| |  |||||||||||| ||||||||||||||||| ||||||    
T  9421968 atcttattgatcaagcaatacgcatatcttctaagaatcagctgtgaaatatttctaaattagattttatattttaggaaatatttattattggttggaa 9422067  T
Q  300 cgatcctataaat 312  Q
    |||||||||||||    
T  9422068 cgatcctataaat 9422080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 22081974 - 22082250
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||| ||||| |||  |||| || |||||||||||||| | || |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  22081974 aaaacaaatatccatgtttgtgtt-gttgaaatcaatgttccaacatat-ttcaggcatctctgtaagatgttggatacgatgttccaacatcctggcac 22082071  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||||||| |||||||  || |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||| |    
T  22082072 ggttcagtgtgcttgagttcatgcatgtttgtacgtgcgccctttattgtttaaggaaacaatatttccctatcttattgaccaaggaacgcacatatat 22082171  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   | |||||| | ||||||||| |||||||    |||||||||| |||||||||| ||||||||| | |||||||||    
T  22082172 ttacataatcagttgtggaatattcctaaagtagtgtttatattttaggaaatatttgttattgttttggacgatccta 22082250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 285
Target Start/End: Original strand, 30605030 - 30605228
Alignment:
Q  87 tctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaa 186  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  || | |||||||| ||| ||||||||||||||||||    
T  30605030 tctctgtaagatgttggatacgatgttccaacatcctggcacggttcagtgtgcctgagttcatgcttatttgtacgggcgccctttattgtttaaggaa 30605129  T
Q  187 acaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatattt 285  Q
    ||||||||||||||||||||||||||| |||||| ||||||||   |||||||| | ||||||||| |||||||    |||||||||| ||||||||||    
T  30605130 acaatatttccttatcttattgatcaagcaacgcgcatatctttacagaatcagttgtggaatattcctaaagttgtgtttatattttaggaaatattt 30605228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 26037654 - 26037378
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||| ||||||| |||  ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||     
T  26037654 aaaacaaatattcttgtttgtgtt-gttggaaccaatgtttcaacatgtgtttaggcatctctgtaagatgtcggatacgatgttccaacatcctggcat 26037556  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||||||  ||||  || | ||||  |||||  |||||||||||||||||||||||||||||||||| |||||| ||| |||||| |||||||    
T  26037555 ggttcagtgtgcctcggttcatgcatatttg-gcgcgcaccctttattgtttaaggaaacaatatttccttatcctattgaccaagcaacgcgcatatct 26037457  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   | |||||| | ||||||||| ||||||| ||| |||||||||| |||||||||| ||||||||| | |||||||||    
T  26037456 ttacaaaatcagttgtggaatattcctaaagtagta-tttatattttaggaaatatttgttattgttttggacgatccta 26037378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 38406237 - 38405956
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||| ||||||| |||  |||||||||||||||||||||||  || |||| | ||| ||||||||||||||||| | |||| |||||| ||||    
T  38406237 aaaacaaatattcttgtttgtgtt-gttggaaccaatgttccaacatga-ttcaggcatgtctataagatgttggatacgatgttccagcatcctagcac 38406140  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||||||||     ||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||    
T  38406139 ggttcagtgtgccctgtatcttgcttgtttgtacgcgtgccctttattgtttaaggaaacaatatttccttatcttattgaccaagcaacgcgtatatct 38406040  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |   |||||||| | ||||||||| |||||||    |||||||||| |||||||||| ||||||||| | ||||||||| ||||    
T  38406039 ttacagaatcagttgtggaatattcctaaagtaatgtttatattttaggaaatattttttattgttttggacgatcctaaaaat 38405956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 25104948 - 25105024
Alignment:
Q  236 atcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25104948 atcagctctagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 25105024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 25164041 - 25164117
Alignment:
Q  236 atcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25164041 atcagctctagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 25164117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 22240260 - 22240345
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctcc 115  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||| |||||| |||||    
T  22240260 aaaacaaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggtgtctctgaaagatgttgaatacgatgctcc 22240345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 9420636 - 9420712
Alignment:
Q  29 aaaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggat 105  Q
    ||||||||||||||||||  ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  9420636 aaaaacaaatatccttgtcctgtaagttggaactaaagttccaacatgtgtttaggcatctctgtaagatgttggat 9420712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 23624717 - 23624557
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||||  || | || | ||||||||||||||||||||| | ||||||||||||||||    
T  23624717 aaaacaaatatccttgtttctgtt-gttggaaccaatgtcccaacatga-ttcaagcatgtctgtaagatgttggatacgatgttccaacatcctggcac 23624620  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaata 192  Q
    |||||||||||||     ||| |  ||||| |||||||| |||||||| |||||||||||||||    
T  23624619 ggttcagtgtgccatgtatcttgattgtttctacgcgcg-cctttattatttaaggaaacaata 23624557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 20714026 - 20714222
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||| ||||| | | ||||||    |||||||||||||| || |||| ||||| ||||||||| ||||||| | ||||||||||||| |||    
T  20714026 aaaacaaatatccatgtttaggatgttggatatcatgttccaacatgt-ttcaggcatctctataagatgttagatacgatgttccaacatcctggaacg 20714124  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttat-tgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||| |||||||||   |||  |||||||||||||||||  |||||| | ||||||||||| || || || ||||||| ||| ||| |||||| |||||||    
T  20714125 gtttagtgtgccttctttcatgcctgtttgtacgcgcg--ctttatctttttaaggaaaccattttcccgtatcttactgaccaagcaacgcgcatatct 20714222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 260
Target Start/End: Original strand, 26328523 - 26328727
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||| |  |||  ||| ||| ||||||||||||||| | ||||||||||    | ||||||||||| ||||||||  ||     
T  26328523 gttggaaccaatgttccaacatgt-tacaggtatctatgtgagatgttggatacgatgttccaacatcccaatatggttcagtgtgtctgagttcatgct 26328621  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
    |||||||||||||| ||||   | |  ||||||||||  |||||||||||| |||| |||  ||||||||||||||   |||||||| | || ||||||     
T  26328622 tgtttgtacgcgcg-ccttatctttaaaaggaaacaacttttccttatcttgttgaccaagtaacgcacatatctttatagaatcagttgtgtaatattc 26328720  T
Q  254 ctaaagt 260  Q
    |||||||    
T  26328721 ctaaagt 26328727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 18221838 - 18221787
Alignment:
Q  178 tttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  18221838 tttaaggaaaccgtatttccttatcttattgatcaagcaacacacatatctt 18221787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 13941332 - 13941409
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| ||||||| | | |||||||||||||||| || | |||||||||||| || |||||| |||||||    
T  13941332 atgttccaacatgt-tttaggcatttttgtaagatgttggatatgatgttccaacatcctgacatggttcaatgtgcct 13941409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 22183661 - 22183711
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| |||||||||||||| | ||||| ||| |||||||||||||||||||    
T  22183661 tgtatgatgttggatacgatgttccaatatcttggcacggttcagtgtgcc 22183711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 20127753 - 20127705
Alignment:
Q  93 taagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||||||| | |||||||||  || |||||||||||||||    
T  20127753 taagatgttggatacgatgttccaacatctgggtacggttcagtgtgcc 20127705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 159948 - 159666
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||    
T  159948 aaaacaaatatccttgttctgtaagttgaaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgccccaacatcctggcacg 159849  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    || ||||||  |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |    
T  159848 gtccagtgtctctgagttctcgcctgtttgtacacgcaccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatcat 159749  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  159748 ctaagaatcaactgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 159666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 47673 - 47956
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||| |||||||  || ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  47673 aaaacaaatatccttgttctgtaagttagaaccaaaatttcaacatgtgtttaggcgtctctggaagatgttggatacgatactccaacatcctggcacg 47772  T
Q  130 gttcagtgtgcctgagttctcgcc-tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| || ||| |||||||    
T  47773 gttcagtgtgcctgagttctcgcggtgtttgtacgcgcgccctttgttgtttaagaaaacaatatttccttaacttattgatcaagcagcgcgcatatct 47872  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  47873 tctaagaatcagctaaggaatatttctaaaatgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 47956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 12911369 - 12911087
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||  |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||| |||||| ||| ||||    
T  12911369 aaaacaaatatcattgtcctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatacgatgcttcaacattctgacacg 12911270  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| |||||| | |||| |    
T  12911269 gttcagtgtgtctgagttctcgcttgtttgtacgcgcgccctttattgtttaaggaaataatatttccttaacttattgatcaagcaacgcgcgtatcat 12911170  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  12911169 ctaagaatcagctgtgaaatatttctaaagtgtatcttatattttaggaaatatttattattgtttggaacgatcctataaat 12911087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 24789441 - 24789723
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| ||||| ||||||||||  || |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  24789441 aaaataaatatccttgttctgtaatttggaaccaaaatttcaacatgtgtttaggcatctctggaagatgttggatacgatgctccaacatcctggcacg 24789540  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||  ||||||| ||| |||||  | |||| |    
T  24789541 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgccctttattgtttaaggaaaatatatttccttaatttattgaccaagcaacgtgcttatcat 24789640  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  24789641 ctaagaatcagctgtggaatattactaaagtgtattttatattttaggaaaaatttaatattgtttggaacgatcctataaat 24789723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 23759501 - 23759219
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||| |||||| ||||| || ||||||| ||| |||||||| ||||||||||| || ||||||||||||  || ||| |||||||||| ||||    
T  23759501 aaaacaaatattcttgttctgtaacttagaaccaaagtttcaacatgtatttaggcgtctttggaagatgttggatgtgatgcttcaacatcctgtcacg 23759402  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||| |    
T  23759401 gttcaatgtgcctgagttctcaactgtttgtacgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgtgcatatcat 23759302  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     |||||||||| | | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  23759301 ataagaatcagttgtagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaat 23759219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 114 - 312
Target Start/End: Complemental strand, 22611684 - 22611486
Alignment:
Q  114 ccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaa 213  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  22611684 ccaacatcctgacacggttcagtgtgactgagttctcgcctgtttgtacgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaa 22611585  T
Q  214 acaacgcacatatcttctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  22611584 gcaacgcgcatatcttctaagaatcagctatggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcttataaat 22611486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 227
Target Start/End: Complemental strand, 15329172 - 15329001
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||  || |||| | ||||||||||||||||||||| | ||||||||||||||||||||| |||||||     ||| |||    
T  15329172 gttggaaccaatgttccaacatga-ttcaggcatgtctgtaagatgttggatacgatgttccaacatcctggcacggttctgtgtgccatgtatcttgcc 15329074  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatc 227  Q
    |||||||||||||  |||  | | ||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  15329073 tgtttgtacgcgc-acctaaactatttaaggaaacaatatttccttatcttattgactaagcaacgcgcatatc 15329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 21531220 - 21531076
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacg 163  Q
    |||||||||||||| || |||| ||||||||||||||||||||| | | ||||||||||||| | ||||| ||||||||   |||  |||||||||||||    
T  21531220 atgttccaacatgt-ttcaggcatctctgtaagatgttggatacaatgttccaacatcctggtatggttcggtgtgccttgtttcatgcctgtttgtacg 21531122  T
Q  164 cgcgtcctttattgtttaaggaaacaatatttccttatcttattga 209  Q
    |||| | |||||| ||||||||||| ||||||||||||||||||||    
T  21531121 cgcgccttttattatttaaggaaaccatatttccttatcttattga 21531076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22614417 - 22614329
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaac 118  Q
    |||| ||||||||||||| ||||||||| |||||| ||| ||||||| ||||||| ||||||| |||||||||||||| | ||||||||    
T  22614417 aaaataaatatccttgttctgtaagttgaaaccaaagtttcaacatgcgtttaggtgtctctggaagatgttggataccatgctccaac 22614329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 21249515 - 21249592
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| || |||| | ||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  21249515 atgttccaacatgt-ttcaggcatttctgtaagatgttggatacgatgttccaacatcctggcacggtttagtgtgcct 21249592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 27108254 - 27108209
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  27108254 gatgttggatacgatgttccaacatcctggcacggttcagtgtgcc 27108209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 24311196 - 24311246
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| |||||||||||| | | |||||||||||||||||||||||||||||    
T  24311196 tgtatgatgttggatacaatgttccaacatcctggcacggttcagtgtgcc 24311246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 27111843 - 27111798
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||    
T  27111843 gatgttggatacgatgttccaacatcctggcacggttcaatgtgcc 27111798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 36397839 - 36397883
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  36397839 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 36397883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 303
Target Start/End: Original strand, 1283 - 1556
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||| |    
T  1283 aaaataaatatccttgttttgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttggatatgatgctccaacatcctagcatg 1382  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |    
T  1383 gttcagtgtgcctgagttctcgcctgtttgtacgcgcaccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatcat 1482  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgat 303  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||| | |||||||||||||||| | |||||||    
T  1483 ctaagaatcagctgtagaatatttctaaactgtattttatattttagcaaatatttattattgtctagaacgat 1556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 309
Target Start/End: Complemental strand, 2766 - 2488
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| || |||||| |||  ||||||||| || ||| ||| ||||||| |||||||    
T  2766 aaaacaaatatccttgttttgtaagttgaaaccaaagtttcaacatgtattcaggcgtatcttgaagatgttgtat-cgatgctacaacatcttggcacg 2668  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  2667 gttcagtgtgcctgagttctcgactgtttgtacgcacgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcgcatatctt 2568  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctata 309  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  2567 ctaagaatcagctgtggaatatttctaaagtgtattatatattttaggaaatatttattattgtttggaacgatcctata 2488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 109541 - 109823
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||| ||| ||| ||||||||||| |||    
T  109541 aaaacaaatatccctgttctgtaagttggaaccaaagtttcaacatgtgtttaggcgtctctggaagatgttagatgcgatgcttcaacatcctggaacg 109640  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||| |    
T  109641 gtttagtgtgtctgagttctcgcctgtttgtacgcgcgccctttattgtttaaggaaacaagatttccttaacttattgatcaagcaacgcgcatatcat 109740  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  109741 ctaagaatcaattgtggaatatttctaaagtgtattttatattttaggaaatatttaattttgtttggaacgatcctataaat 109823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 22486010 - 22485728
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||| || | ||||||||||| ||||||||||||||||||     
T  22486010 aaaataaatatccttgttctgtaagttggaaccaaagtttcaacatgtgtttaggtgtctctggaaaaagttggatacgatgctccaacatcctggcaca 22485911  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | || |||||||||||| |||| | |||||| |    
T  22485910 gttcagtgtgcctgagttctcgtctgtttgtacgcgcgccctttattgtttaaggaaacaatattttcctaacttattgatcaagcaacacgcatatcat 22485811  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
     |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  22485810 ttaagaatcagctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttagaacgatcctataaat 22485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 23540689 - 23540971
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||     
T  23540689 aaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctgtaagatgatggatacgatgttccaacatcctggcaca 23540788  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| |||||||||| |||   ||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  23540789 gtttagtgtgcctgggtttatgcctacttgtacgcgcgccctttattgtttaaggaaacaatatttccttatcttattgattaagcaacgcgcatatctt 23540888  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||| |||||||||||||||||  |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  23540889 ctaagaatcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat 23540971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 35 - 312
Target Start/End: Complemental strand, 45136982 - 45136706
Alignment:
Q  35 aaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttca 134  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||  ||||||| |||||||||||| || | |||||||||||| ||||||| |    
T  45136982 aaatatccttgttgtgcaagttggaatcaatgttccaacatgtgtttaggtatctctgttagatgttggatatgatgttccaacatcctgacacggttta 45136883  T
Q  135 gtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaag 234  Q
    |||||| |||||||| ||||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||  || ||| ||  |||||||  |||    
T  45136882 gtgtgcttgagttcttgcctacttgta-gcgcgccctttattgtttaaggaaacaatatttcattatcttattgacaaagcaatgcgtatatctttgaag 45136784  T
Q  235 aatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  45136783 aatcagctgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctataaat 45136706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 31 - 307
Target Start/End: Original strand, 27924735 - 27925012
Alignment:
Q  31 aaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| || | |||||||||||| ||||    
T  27924735 aaacaaatatccttgattgtgtaagttggaaccaatgttccaacatgtgtttaggcatttctgtaagatgttggataagatgttccaacatcctgacacg 27924834  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
     ||||||||||||| ||||  ||||  |||||||| ||  ||||||||||||||||||||||||||||||||||||||||  || |||||| |||||||     
T  27924835 attcagtgtgcctgggttcatgcctacttgtacgcacgctctttattgtttaaggaaacaatatttccttatcttattgacaaagcaacgcgcatatcta 27924934  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
       ||||||| || |||||||||||||||||  ||||||||||||  ||||||||| |||||| ||||||||||||||    
T  27924935 tacagaatcaactgtggaatatttctaaagtagattttatattttatgaaatatttgttattggttggaacgatccta 27925012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 307
Target Start/End: Complemental strand, 33962586 - 33962333
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  | | |||||||||||||||| |||||||||||||||| ||  | |    
T  33962586 gttggaaccaatgttccaacatgtatttaggcatctctgtaagatgttggatattatgttccaacatcctggcacagttcagtgtgcctgaggtcatgtc 33962487  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||   ||||||||   |||||||||     
T  33962486 tctttgtacgcgcgccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacgcgcatatctttacagaatcagtcgtggaatattc 33962387  T
Q  254 ctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    ||||||| ||| ||||| |||| ||||| |||| |||||| || | |||||||||    
T  33962386 ctaaagtagta-tttattttttaggaaaaatttgttattgatttggacgatccta 33962333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 307
Target Start/End: Complemental strand, 33977912 - 33977659
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  | | |||||||||||| ||| |||||||||| ||| ||||  |||    
T  33977912 gttggaaccaatgttccaacatgtatttaggcatctctgtaagatgttggatattatgttccaacatcctgacacagttcagtgtgtctgggttcatgcc 33977813  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
    | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||   |||||||| | |||||||||     
T  33977812 tatttgtacgtgcgccctttattgtttaaggaaacaatatttccttatcttattgatcaagcaatgcgcatatctttacagaatcagttgtggaatattc 33977713  T
Q  254 ctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    ||||||| ||| ||||| |||| ||||| |||| |||||| || | |||||||||    
T  33977712 ctaaagtagta-tttattttttaggaaaaatttgttattgatttggacgatccta 33977659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 295
Target Start/End: Complemental strand, 26537164 - 26536898
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  ||| |||||||| ||| ||||||||||||||| | || ||||||||||||||| || | ||||||||| ||||||    
T  26537164 aaaacaaatatccttgtttgtgtt-gttagaaccaatcttctaacatgtgtttaggcatatccgtaagatgttggatatgatgttccaacatcatggcac 26537066  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatc- 227  Q
    ||||||||||| ||  ||||  |||| |||||||| ||| |  |||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||     
T  26537065 ggttcagtgtgtctaggttcatgcctatttgtacgtgcgccacttatggtttaaggaaacaatatttccttatcttattgaccaagcaacgcgcatatct 26536966  T
Q  228 ttctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgttt 295  Q
    ||  || |||||| | || |||||| ||||||| ||| ||||||||||  ||||||||| |||||||||    
T  26536965 ttacaaaaatcagttgtgaaatattcctaaagtagta-tttatattttatgaaatatttgttattgttt 26536898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 18622503 - 18622339
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacg 163  Q
    |||||||||||||| || || | ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||   |||| ||| || ||||||    
T  18622503 atgttccaacatgt-ttcagacatctctgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtgccttgtttcttgccggtgtgtacg 18622405  T
Q  164 cgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||   | |||| ||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  18622404 cgcgctttatattatttaaggaaatcatatttccttatcttattgaccaaacaacgcacatatctt 18622339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 22476890 - 22476808
Alignment:
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaa 236  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| | |||||| ||||||||    
T  22476890 tgtttgtacgcgcgccctttattgtttaaggaaacaatatttccctaacttattgatcaagcaacacgcatatcatctaagaa 22476808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 9997332 - 9997235
Alignment:
Q  70 caacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtc 169  Q
    |||||||| ||||||| | ||||||||||||||||||||| | || | |||  |||||||||||||||||||||| |||  |||| ||||||||||||||    
T  9997332 caacatgt-tttaggcatttctgtaagatgttggatacgatgttcta-cattttggcacggttcagtgtgcctgatttcatgcctatttgtacgcgcgtc 9997235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 22476951 - 22476893
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtc 88  Q
    |||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  22476951 aaaacaaatatctttgttctgtaagttggagccaaagtttcaacatgtgtttaggcgtc 22476893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 20254194 - 20254271
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| ||||||| |  |||| | |||||||||| || | |||||||||||| |||||||||||||||||    
T  20254194 atgttccaacatgt-tttaggcattcctgtgaaatgttggatatgatgttccaacatcctgacacggttcagtgtgcct 20254271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 1684765 - 1684721
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||| ||||||| ||||||||||||| |||| ||||||||||||    
T  1684765 atgtttgatacgatgctccaacatcctagcacagttcagtgtgcc 1684721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 30 - 312
Target Start/End: Original strand, 11520693 - 11520976
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||||| ||||| |||||||||| ||| |||||||||||||||||||| || |||||||||||||| | ||| |||||||||||||||    
T  11520693 aaaacaaatatctttgttctgtaatttggaaccaaagtttcaacatgtgtttaggcgtctatggaagatgttggatacaatgcttcaacatcctggcacg 11520792  T
Q  130 gttcagtgtgcctgagttctcgcctgttt-gtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||   |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  11520793 gttcagtgtgttcgagttctcgcctgttttgtacgcgcgccctttattgtttaaggaaacaatatttccttaacttattgatcaagcaacgcccatatct 11520892  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||| | | ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11520893 tctaagaatcggttgtggaatatttctaaattgtgttttatattttaggaaatatttattattgtttggaacgatcctataaat 11520976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 646009 - 645731
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| | |||||| ||||||| ||| ||||||||||||| ||||||||  || ||||||||| ||| ||| |||||||||||||||    
T  646009 aaaacaaatatccttgttctctaagttagaaccaaagtttcaacatgtgtttaagcgtctctagaaaatgttggatgcgatgcttcaacatcctggcacg 645910  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| | |||| |||||| |    
T  645909 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgt-ctttattgtttaaggaaacaatattttcttaacttattgatcaagctacgcgcatatcat 645811  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||| |||||||    
T  645810 ctaagaatcag---tggaatatttctaaagtgtattttatattttaggaaatatcgaatattgtttggaacgatcatataaat 645731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 34 - 312
Target Start/End: Original strand, 16207167 - 16207445
Alignment:
Q  34 caaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttc 133  Q
    |||||||| ||||| ||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||| || | ||||||||||||||| |||||    
T  16207167 caaatatctttgttgtgtaagttgaaaccaacattccaacatgtgtttaggcatctctgtaagatgttggatatgatgttccaacatcctggcatggttc 16207266  T
Q  134 agtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaa 233  Q
    |||||||||| ||||  ||||  ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||  ||    
T  16207267 agtgtgcctgggttcatgcctacttgtacgcgcaccctttattgtttaaggaaacaatatttccttatcttgttgatcaagcaacacacatatctttgaa 16207366  T
Q  234 gaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||| | | ||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  16207367 gaatcagttgtcgaatatttctaaagtatattttatattttaggaaatattttttattggttggaacgatcctataaat 16207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 4459617 - 4459334
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | | ||||||||||| ||||    
T  4459617 aaaacaaatatccttgtttctgtaagttggaaccaatgttccaacatctgtttaggcatctctgtaagatgttggatacaatgttccaacatcctagcac 4459518  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    | ||||||||||||  ||||  |||| |||||||||||| ||||||||||||| |||||||||||||||||| |||||||  ||| ||||||  ||||||    
T  4459517 gattcagtgtgcctaggttcatgcctatttgtacgcgcgccctttattgtttatggaaacaatatttccttaacttattgtccaagcaacgcgaatatct 4459418  T
Q  229 tctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
        |||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4459417 atccagaatcagctgtggaatatttctaaagtagattttatatttttggaaatatttgttattggttggaacgatcctataaat 4459334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 30 - 309
Target Start/End: Complemental strand, 15507107 - 15506828
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | || ||||||||| ||||    
T  15507107 aaaacaaatatccttgatgtgtaagttggaaccaatgttccaacatgtgtttaggcatctctataagatgttggatacgatgttcaaacatcctgacacg 15507008  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||| ||| |||||| ||||| ||||   ||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||  || || ||||||||    
T  15507007 gttaagtatgcctgggttcttgcctacctgtacgcgcgctctttattgtttaaggaaacaatattttcttatcttattgaccaagaaatgcgcatatctt 15506908  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctata 309  Q
      ||||||||| | ||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  15506907 tgaagaatcagttgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctata 15506828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 37 - 312
Target Start/End: Complemental strand, 15438946 - 15438672
Alignment:
Q  37 atatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagt 136  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||| ||||||| |||    
T  15438946 atatccttgatgtgtaagttggaaccaatgttcaaacatgtgtttaggcatctctgtaagatgttggatacgatgtttaaacatcctgacacggttaagt 15438847  T
Q  137 gtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaa 236  Q
    ||||||| ||||| ||||   ||||||| |   |||||||||||||||||||||||||| ||||||||||||| ||| ||| || ||||||||  |||||    
T  15438846 gtgcctgggttcttgcctacctgtacgcacactctttattgtttaaggaaacaatattttcttatcttattgaccaagcaatgcgcatatctttgaagaa 15438747  T
Q  237 tcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||| |||||||||||||||||||| ||||||||||||| |||||||||| |||||| || ||||||||||||||||    
T  15438746 tcaactttggaatatttctaaagtatattttatattttaggaaatatttgttattggtt-gaacgatcctataaat 15438672  T

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Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 20992421 - 20992143
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| ||||||||||||||| ||||  ||||| ||||||||| |||||||||||||||||||| || | ||||||||||||||||    
T  20992421 aaaacaaatatccttgtttatgtaagttggaaccagtgttttaacatttgtttaggcatctctgtaagatgttggatatgatgttccaacatcctggcac 20992322  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||||||  ||||  |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  20992321 ggttcagtgtgcctaggttcatgcctatttgtacgcgcactctttattgtttaaggaaacaatatttccttatcttattgaccaagcaacgcgcatatct 20992222  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
        | ||||| || | ||||||||||||||| ||| |||||||||| |||||||||| ||||||  |||||||||||||    
T  20992221 atacaaaatcaactgttgaatatttctaaagtagta-tttatattttaggaaatatttgttattgggtggaacgatccta 20992143  T

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Target: chr7; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 54 - 307
Target Start/End: Original strand, 29545447 - 29545700
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| ||| ||||||||||| ||| ||||  |||    
T  29545447 gttggaactaatgttccaacatgtgtttaggcatctctgtaagatgttggatacaatgttccaacatcctagcatggttcagtgtgtctgggttcatgcc 29545546  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatattt 253  Q
    | |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||   |||||||| | |||||||||     
T  29545547 tatttgtacgcgcgccctttattgtttaaggaaacaatatttccgtatcttattgatcaagcaacgtgcatatctttacagaatcagttgtggaatattc 29545646  T
Q  254 ctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    ||||||| ||| |||||||||| |||||||||| ||||||||| | |||||||||    
T  29545647 ctaaagtagta-tttatattttaggaaatatttgttattgttttggacgatccta 29545700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 30 - 307
Target Start/End: Complemental strand, 12326689 - 12326411
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||| | ||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||    
T  12326689 aaaacaaatatccttggtgtgtaagttggaacaaaggttccaacatgtgtttaggcatctctataagatgttggatacgatgttccaacatcctggcacg 12326590  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||| || ||||  ||||  ||||||||||   |||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||     
T  12326589 gttcagtgtgcatgggttcatgcctacttgtacgcgcactctttattgtttaaggaaacaatatttccttatcttattgaccaagaaacgcgcatatcta 12326490  T
Q  230 ctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttatta-ttgtttggaacgatccta 307  Q
        |||| |||| ||||||||||||||||| ||| |||||||||| | |||||||| ||| ||||| | ||||||||||    
T  12326489 taccgaattagctgtggaatatttctaaagtagta-tttatattttagaaaatatttgttatttgttggaaacgatccta 12326411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 312
Target Start/End: Complemental strand, 14166037 - 14165760
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||||| ||||||  |||| ||||||||||||||| | |  |||||||||| |||      
T  14166037 aaaaaaaatatccttgttctgtaagttggagccaaagttccaacatgtggttaggcaactctataagatgttggatacaatgtcccaacatcctagcata 14165938  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    | | |||||||||| ||||  |||| | |||||||||| || |||| ||    |||||||||||||||||| |||||||||||| |||| | |||||| |    
T  14165937 gctaagtgtgcctgggttcatgcctatatgtacgcgcgcccgttat-gt----ggaaacaatatttccttaacttattgatcaagcaacacgcatatcat 14165843  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||||  |||||||||||||||||  || ||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  14165842 ctaagaatcagcggtggaatatttctaaagtagatattatattttaggaaatatttatttttgtttggaacgctcctataaat 14165760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 290
Target Start/End: Original strand, 16221874 - 16222115
Alignment:
Q  49 tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttc 148  Q
    ||||||||||||||||  ||||||||||||||  ||| ||||||||||||||||||||||| | ||||||||||||||| | || | |||| ||  ||||    
T  16221874 tgtaagttggaaccaacattccaacatgtgttctggcatctctgtaagatgttggatacgatgttccaacatcctggcatgatttactgtgtctaggttc 16221973  T
Q  149 tcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaa 248  Q
       |||  ||||| ||||  ||||| |||||||||||||||||||||||||||||| |||| | | |||||||||||||||  ||||||||| | || ||    
T  16221974 atacctacttgtatgcgccccctttcttgtttaaggaaacaatatttccttatcttgttgacctagcaacgcacatatctttgaagaatcagttgtgaaa 16222073  T
Q  249 tatttctaaagtgtattttatatttttggaaatatttattat 290  Q
     |||||||||||   ||||||||||| |||||||||| ||||    
T  16222074 aatttctaaagtaggttttatattttaggaaatatttgttat 16222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 259
Target Start/End: Complemental strand, 14927521 - 14927295
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||| ||||| |||  ||||||  |||||||||||||||| || || | ||||| ||||||||||||||||| | ||||||||||||||||    
T  14927521 aaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-ttcagacatctctttaagatgttggatacgatgttccaacatcctggcac 14927424  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||| |||||||||    ||  | | ||||||||||||| | |||||| ||||||||||| |||||| |||||||  |||| ||| |||| | |||||||    
T  14927423 ggtttagtgtgccttgtatcatgtcggtttgtacgcgcgccttttattatttaaggaaaccatattttcttatct--ttgaccaagcaacacgcatatct 14927326  T
Q  229 tctaagaatcagctttggaatatttctaaag 259  Q
    |   |||||||| | ||||||||| ||||||    
T  14927325 ttacagaatcagttgtggaatattcctaaag 14927295  T

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Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 259
Target Start/End: Complemental strand, 15350987 - 15350761
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||| ||||| |||  ||||||  |||||||||||||||| || || | ||||| ||||||||||||||||| | ||||||||||||||||    
T  15350987 aaaacaaatatccatgtttgtgtt-gttggatacaatgttccaacatgt-ttcagacatctctttaagatgttggatacgatgttccaacatcctggcac 15350890  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||| |||||||||    ||  | | ||||||||||||| | |||||| ||||||||||| |||||| |||||||  |||| ||| |||| | |||||||    
T  15350889 ggtttagtgtgccttgtatcatgtcggtttgtacgcgcgccttttattatttaaggaaaccatattttcttatct--ttgaccaagcaacacgcatatct 15350792  T
Q  229 tctaagaatcagctttggaatatttctaaag 259  Q
    |   |||||||| | ||||||||| ||||||    
T  15350791 ttacagaatcagttgtggaatattcctaaag 15350761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 10661701 - 10661600
Alignment:
Q  67 ttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgc 166  Q
    ||||||||||| ||||||| | | ||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||  |||| |||||||||||    
T  10661701 ttccaacatgt-tttaggcatttatgtaagatgttggatacgatgttccaacatcctagcacggttcagtgtgcctgatttcatgcctatttgtacgcgc 10661603  T
Q  167 gtc 169  Q
    |||    
T  10661602 gtc 10661600  T

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Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 23082083 - 23082170
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    ||||||| | |||||||||||||| ||||||| | |||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  23082083 gttggaaactatgttccaacatgt-tttaggcatttctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcct 23082170  T

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Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 26132272 - 26132350
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctg 143  Q
    |||||||||||||| || |||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  26132272 atgttccaacatgt-ttcaggcatctctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcctg 26132350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 21261272 - 21261195
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| ||||||| | |||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  21261272 atgttccaacatgt-tttaggcatttctgtaagatgttggatatgatgttccaacatcctggcacggttcagtgtgcct 21261195  T

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Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 285
Target Start/End: Complemental strand, 16437525 - 16437397
Alignment:
Q  156 tttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttct 255  Q
    |||||||||| | |||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||||   || ||||| | ||||||||| ||    
T  16437525 tttgtacgcgtg-cctttattatttaaggaaaccatatgtccttatcttattgatcaagcaacgcacatatctttgcaggatcagttgtggaatattcct 16437427  T
Q  256 aaagtgtattttatatttttggaaatattt 285  Q
    |||||     ||||||||| ||||||||||    
T  16437426 aaagttgtgattatattttaggaaatattt 16437397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 23960853 - 23960764
Alignment:
Q  79 tttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgt 168  Q
    ||||||| | ||||||||||||||||||||| | ||||||||||||||||| |||||||||||| | ||   ||||| ||||||||||||    
T  23960853 tttaggcatttctgtaagatgttggatacgatgttccaacatcctggcacgattcagtgtgccttattttatgcctgattgtacgcgcgt 23960764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 11999525 - 11999476
Alignment:
Q  263 attttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  11999525 attttatattttaggaaatatttattattggttggaacgatcctataaat 11999476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 42637024 - 42636944
Alignment:
Q  89 tctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtc 169  Q
    |||||||||||||| |||||| | |||||| |||||||||||||||||||| |||  |||  |||| ||||||||||||||    
T  42637024 tctgtaagatgttgaatacgatgttccaacgtcctggcacggttcagtgtgtctgctttcatgcctatttgtacgcgcgtc 42636944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 20924423 - 20924501
Alignment:
Q  63 aatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||| ||||||| ||| |||| |||| |||||||||||||||||| | ||||||||||||||| | ||||||||||||    
T  20924423 aatgtttcaacatg-gttcaggcatctccgtaagatgttggatacgatgttccaacatcctggcaagattcagtgtgcct 20924501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 10038047 - 10038124
Alignment:
Q  64 atgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  | | |||||||| |||||| ||||||||||||||    
T  10038047 atgttccaacatgt-tttaggcatttctgtaagatgttggatataatgttccaacatactggcatggttcagtgtgcct 10038124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 11589105 - 11589060
Alignment:
Q  267 tatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||    
T  11589105 tatattttagcaaatatttaatattgtttggaacgatcctataaat 11589060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 19295567 - 19295519
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtg 139  Q
    |||| |||||||||||||| | ||||||||| |||||||||||||||||    
T  19295567 tgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtg 19295519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 24902981 - 24902871
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    ||||||||||||| |||||   | ||||||  | |||||||||||||| ||||||| | |||   |||||||||||| || | |||||||||||| ||||    
T  24902981 aaaacaaatatccatgtttgtgatgttggatactatgttccaacatgt-tttaggcatttctacgagatgttggatatgatgttccaacatcctg-cacg 24902884  T
Q  130 gttcagtgtgcct 142  Q
    |||||||||||||    
T  24902883 gttcagtgtgcct 24902871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 24814909 - 24814859
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| |||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  24814909 tgtatgatgttggatacgatgcttcaacatcttggcacgattcagtgtgcc 24814859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 9567701 - 9567656
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||||||||||||| | ||||||||||| |||| ||||||||||||    
T  9567701 gatgttggatacgatgttccaacatcctagcacagttcagtgtgcc 9567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 10280654 - 10280609
Alignment:
Q  97 atgttggatacgacgctccaacatcctggcacggttcagtgtgcct 142  Q
    |||||||||||||   |||||||||||| |||||||||||||||||    
T  10280654 atgttggatacgatattccaacatcctgccacggttcagtgtgcct 10280609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 15709155 - 15709127
Alignment:
Q  113 tccaacatcctggcacggttcagtgtgcc 141  Q
    |||||||||||||||||||||||||||||    
T  15709155 tccaacatcctggcacggttcagtgtgcc 15709127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 49 - 312
Target Start/End: Complemental strand, 37448 - 37185
Alignment:
Q  49 tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttc 148  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | | |||||||||||| ||||||||||||||||| |||||    
T  37448 tgtaagttggagccaatgtttcaacatgtgtttaggcgtctctgtaaaatgttggatacaatgttccaacatcctgacacggttcagtgtgcctaagttc 37349  T
Q  149 tcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaa 248  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||    
T  37348 tcgcctatttgtaggcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaagcaacacgcatatcttctaagaatcagctgtggaa 37249  T
Q  249 tatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaat 312  Q
    ||||||||||    || |||  |||| |||||||||||||||||||||||||||||||||||||    
T  37248 tatttctaaaaatgatattagtttttaggaaatatttattattgtttggaacgatcctataaat 37185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 17407 - 17684
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||  ||||||||||||||| |||| || | |||||||||||  |||    
T  17407 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggtatctctgtaagatgttagatatgatgttccaacatcctaccac 17505  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||||||||||||  || | |||||| | ||| ||||||||||||||||||||||||||||||||||||||| | |||  ||||| |||||||    
T  17506 ggttcagtgtgcctgagttcatgcatatttgtatgtgcgccctttattgtttaaggaaacaatatttccttatcttattaaccaactaacgcgcatatct 17605  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   |||||||||| ||||||||||||||||| ||| |||||||||| |||||||||| |||||| |||||| |||||||    
T  17606 ttacagaatcagctatggaatatttctaaagtagta-tttatattttaggaaatattttttattggttggaatgatccta 17684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 26801 - 27078
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||  ||||||||||||||| |||| || | |||||||||||  |||    
T  26801 aaaacaaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttaggtatctctgtaagatgttagatatgatgttccaacatcctaccac 26899  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    ||||||||||||||||||||  || | |||||| | ||| ||||||||||||||||||||||||||||||||||||||| | |||  ||||| |||||||    
T  26900 ggttcagtgtgcctgagttcatgcatatttgtatgtgcgccctttattgtttaaggaaacaatatttccttatcttattaaccaactaacgcgcatatct 26999  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
    |   |||||||||| ||||||||||||||||| ||| |||||||||| |||||||||| |||||| |||||| |||||||    
T  27000 ttacagaatcagctatggaatatttctaaagtagta-tttatattttaggaaatattttttattggttggaatgatccta 27078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 307
Target Start/End: Original strand, 6825 - 7097
Alignment:
Q  34 caaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcc-tggcacggt 131  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||| | ||| |||||||| ||||||| || | |||||||||| |||||||||    
T  6825 caaatatccttgtttgtgtt-gttggaaccaatgttccaacatgtgtttagccatctttgtaagattttggatatgatgttccaacatccttggcacggt 6923  T
Q  132 tcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttct 231  Q
    |||||||| ||| ||||  |||| |||||||||||  ||||||||||||||||||| ||||||||||| ||||||||| ||| |||||  |||| |||      
T  6924 tcagtgtgtctgggttcatgcctatttgtacgcgc--cctttattgtttaaggaaataatatttccttttcttattgaccaagcaacgggcatagcttta 7021  T
Q  232 aagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
     | |||||| | ||||||||||||||||| ||| |||||||||| |||||||||| |||||| ||||||||||||||    
T  7022 caaaatcagttctggaatatttctaaagtagta-tttatattttaggaaatatttgttattggttggaacgatccta 7097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 16608 - 16885
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||| ||| | | |||||| ||| ||||||| |||||||||||||||| ||| ||||||||||||||||||| | || ||||||||| || |    
T  16608 aaaacaaatatcattgatgtataagttagaaacaatgtttcaacatgtgtttaggcatctttgtaagatgttggatacgatgatctaacatcctgacatg 16707  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    ||||||||||||||| |||  || |  ||||| ||| | |||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||     
T  16708 gttcagtgtgcctgatttcatgcatacttgtaagcgtgccctttattgtttaaggaaacaataattccttaacttattgaccaaacaacgcgcatatcta 16807  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
       |||||||||  |||||||||||||||||  |||||||||||| |||||||||| |||||| ||||||||||||||    
T  16808 tacagaatcagcggtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatccta 16885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 7861 - 8128
Alignment:
Q  30 aaaacaaatatccttgttt-tgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcac 128  Q
    ||||||||||||||| ||| |||  ||||||||||||||||||||||||||||| || ||||| |||||||||| |||||| | || ||||||| |||||    
T  7861 aaaacaaatatccttatttgtgtt-gttggaaccaatgttccaacatgtgtttaagcatctctataagatgttgcatacgatgttcgaacatcccggcac 7959  T
Q  129 ggttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
     |||||||||||||| ||||  |||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  7960 tgttcagtgtgcctgggttcatgcctatttgtacgcccgctctttattgtttaaggaaacaatatttccttatcttattgaccaagcaacgcacatatct 8059  T
Q  229 tctaagaatcagctttggaatatttctaaagt-gtattttatatttttggaaatatttattattgtttgg 297  Q
    |   |||||||||| ||||||| ||||||||| ||| |||||||||| |||||||||| |||||| ||||    
T  8060 ttatagaatcagctgtggaatacttctaaagtagta-tttatattttaggaaatatttgttattggttgg 8128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 30 - 307
Target Start/End: Original strand, 15904 - 16180
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||| | |||||||||||||||||    
T  15904 aaaataaatatccttgttgtgtaagttggaaccaatattccaacacgtgtttag-catctctgtaagatgttggatacgatgttccaacatcctggcacg 16002  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||| ||||||||| ||||   |||  ||||||| |||  ||||||||||||||||||||||||||| |||||||||||| ||| ||| || |||||||     
T  16003 gttcggtgtgcctgggttcattcctacttgtacgtgcgctctttattgtttaaggaaacaatatttcattatcttattgaccaagcaatgcgcatatcta 16102  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgtttggaacgatccta 307  Q
       |||||||| | | |||||||||||||||  || ||||||||| | |||||||| |||||| ||||||||||||||    
T  16103 tacagaatcagatgttgaatatttctaaagtagatattatattttagaaaatatttgttattggttggaacgatccta 16180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 293
Target Start/End: Complemental strand, 9551 - 9288
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||| |||||||||| | | |||||| || |||||||    
T  9551 aaaacaaatatccttgttttgtaagttgaaaccaaagttccaacatatgtttaggcatctctgtaaggtgttggatacaatgttccaacttcttggcacg 9452  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatctt 229  Q
    |||||||||||||||||||  || | | |||   ||||  ||||||||||||||| |||||||||||||||||||||||  ||| |||| | |||||||     
T  9451 gttcagtgtgcctgagttcatgcatatatgtgtacgcgctctttattgtttaagggaacaatatttccttatcttattgtccaagcaacacgcatatcta 9352  T
Q  230 ctaagaatcagctttggaatatttctaaagtgtattttatatttttggaaatatttattattgt 293  Q
       | |||||||| |||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  9351 tacaaaatcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattgt 9288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 88621 - 88425
Alignment:
Q  30 aaaacaaatatccttgttttgtaagttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacg 129  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |||  |||||||||||||||| | | |||||||||||| || |    
T  88621 aaaacaaatatccttgttctgtaagttggaaccaaagttccaacatgtggttaggcatct--gtaagatgttggatacaatgttccaacatcctgacatg 88524  T
Q  130 gttcagtgtgcctgagttctcgcctgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatct 228  Q
    |||||||||||||||||||  || | | ||||||||||  ||||||||||||||| ||||||| |||||||||||||||  ||| |||||| |||||||    
T  88523 gttcagtgtgcctgagttcatgcatatatgtacgcgcgctctttattgtttaagggaacaatagttccttatcttattgtccaagcaacgcgcatatct 88425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 814 - 661
Alignment:
Q  54 gttggaaccaatgttccaacatgtgtttaggcgtctctgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcctgagttctcgcc 153  Q
    |||||||| |||||||||  ||| ||| |||| | ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||  |||    
T  814 gttggaactaatgttccaggatg-gttcaggcatgtctgtaagatgttggatacgatgttccaacatcttggcacggttcagtgtgcctg-gttcatgcc 717  T
Q  154 tgtttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattga 209  Q
    |     |||||||| | | |||| ||||||||||| ||||||||||||||||||||    
T  716 tacacttacgcgcgccttgtattatttaaggaaaccatatttccttatcttattga 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 285
Target Start/End: Complemental strand, 27155 - 27027
Alignment:
Q  156 tttgtacgcgcgtcctttattgtttaaggaaacaatatttccttatcttattgatcaaacaacgcacatatcttctaagaatcagctttggaatatttct 255  Q
    |||||||||| | |||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||||   || ||||| | ||||||||| ||    
T  27155 tttgtacgcgtg-cctttattatttaaggaaaccatatgtccttatcttattgatcaagcaacgcacatatctttgcaggatcagttgtggaatattcct 27057  T
Q  256 aaagtgtattttatatttttggaaatattt 285  Q
    |||||     ||||||||| ||||||||||    
T  27056 aaagttgtgattatattttaggaaatattt 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 38121 - 38074
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgt 138  Q
    ||||||||||||||||||| | |||||||||||||||| ||| |||||    
T  38121 tgtaagatgttggatacgatgttccaacatcctggcacagttaagtgt 38074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 45311 - 45361
Alignment:
Q  91 tgtaagatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||| |||||||||||||| | ||||||||| ||||| |||||||||||||    
T  45311 tgtatgatgttggatacgatgttccaacatcttggcatggttcagtgtgcc 45361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 5778 - 5733
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||    
T  5778 gatgttggatatgatgttccaacatcctggcatggttcagtgtgcc 5733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 12033 - 11988
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||    
T  12033 gatgttggatatgatgttccaacatcctggcatggttcagtgtgcc 11988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 11991 - 11946
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    ||||||||| |||| | | |||||||||||||||||||||||||||    
T  11991 gatgttggacacgatgtttcaacatcctggcacggttcagtgtgcc 11946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 50258 - 50303
Alignment:
Q  96 gatgttggatacgacgctccaacatcctggcacggttcagtgtgcc 141  Q
    |||||||||||||| | ||||||||||| |||| ||||||||||||    
T  50258 gatgttggatacgatgttccaacatcctagcacagttcagtgtgcc 50303  T

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