View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0702_low_10 (Length: 251)
Name: NF0702_low_10
Description: NF0702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0702_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 394976 - 395220
Alignment:
| Q |
1 |
ctatgactccagatgaaactatatcagaggttcagaattcagtttctgaggtaccaatacgccacagccttcctataacatcagggattccccgttcttc |
100 |
Q |
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|
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
394976 |
ctatgactgcagttgaaactatatcagaggttcagaattcagtttctgaggtaccgatacgccacagccttcctataacatcagggattccccgttcttc |
395075 |
T |
|
| Q |
101 |
gcggcctcccttatatagaaataatcaaggagcttcttcttcttccagatattttttggaacaaagacattatcatcataattatggaacaaagaagatt |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
395076 |
gcggcctcctttatatagaaataatcaaggagcttcttcttcttccagatcttttttagaacaaagacattatcatcataattatggaacaaagaagatt |
395175 |
T |
|
| Q |
201 |
caccatctaaacagctatgtagttaatcaaaagcattcatctcac |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
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|
| T |
395176 |
caccatctaaacagctatgtagttaatcaaaagcattcatatcac |
395220 |
T |
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