View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0707-INSERTION-4 (Length: 711)
Name: NF0707-INSERTION-4
Description: NF0707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707-INSERTION-4 |
 | |
|
| [»] chr8 (3 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 40287193 - 40287527
Alignment:
| Q |
8 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaa |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
40287193 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactattggaaagcaaccaatttttcctgagaaggtctcattaccatcaccatcaa |
40287292 |
T |
|
| Q |
108 |
atcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaata |
207 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |
|
|
| T |
40287293 |
atcttggcctagccacaacaactaaaaacatgaccttaccgatgtaatttttgttcctacacatacgatgtggctcatcctcatcagcaagaaggtaata |
40287392 |
T |
|
| Q |
208 |
gttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctca |
307 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
40287393 |
gtttgatgactttttcgttatatagaaccatttttcatcaatgtgaacaacattatacataggcttaaacactggatcatgtggtatgctactctcctca |
40287492 |
T |
|
| Q |
308 |
agcatatccaagcataattcaatacgagctttcaa |
342 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
40287493 |
agcatatccaagcagaattcaatacgagctttcaa |
40287527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 340 - 711
Target Start/End: Original strand, 40287624 - 40287994
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40287624 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
40287723 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||||| ||||| | ||||||||||||| |
|
|
| T |
40287724 |
gatttcttatgacacggatcacccgttttttttacttgcctccaaatccgataaatgacatcttgagagactgaaaaa-taagatgtcaatgttctgaca |
40287822 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40287823 |
atcccacgacaaagtttaccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatt |
40287922 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
40287923 |
gttcaatttcctcaacgataattgcctctacatgattaaaaaaagaagttcttattgttattatatacaaga |
40287994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 8 - 340
Target Start/End: Original strand, 16443825 - 16444157
Alignment:
| Q |
8 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaa |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
16443825 |
ccggcaggcctattgatgctagacctttgtgctgctaccttgtgaactataggaaagcaaccaatttttcctgagaatgtctcgttaccatcatcatcaa |
16443924 |
T |
|
| Q |
108 |
atcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaata |
207 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
16443925 |
atcttggcctagccacgacaactaaaaacattaccttaccaatgtaatttttgttcctacacatacgatgtggctcatcctcatctccaagaaggtaata |
16444024 |
T |
|
| Q |
208 |
gttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctca |
307 |
Q |
| |
|
| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
16444025 |
gctggatgactttttggttatgtagaaccatttttcatctatgtgaacaacattatacataggtttaaacactggatcatgtggtatgctactctcctca |
16444124 |
T |
|
| Q |
308 |
agcatatccaagcataattcaatacgagctttc |
340 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
16444125 |
agcatatccaagcagaattcaatacgagctttc |
16444157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 8 - 340
Target Start/End: Complemental strand, 7304360 - 7304028
Alignment:
| Q |
8 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaa |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
7304360 |
ccggcaggcctattgatgctagacctttgtgctgctaccttgtgaactataggaaagcaaccaatttttcctgagaatgtctcgttaccatcatcatcaa |
7304261 |
T |
|
| Q |
108 |
atcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaata |
207 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
7304260 |
atcttggcctagccacgacaactaaaaacattaccttaccaatgtaatttttgttcctacacatacgatgtggctcatcctcatctccaagaaggtaata |
7304161 |
T |
|
| Q |
208 |
gttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctca |
307 |
Q |
| |
|
| | ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
7304160 |
gctggatgactttttggttatgtagaatcatttttcatctatgtgaacaacattatacataggtttaaacactggatcatgtggtatgctactctcctca |
7304061 |
T |
|
| Q |
308 |
agcatatccaagcataattcaatacgagctttc |
340 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
7304060 |
agcatatccaagcagaattcaatacgagctttc |
7304028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 340 - 711
Target Start/End: Complemental strand, 7303929 - 7303559
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
7303929 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaacgaaacattgcgcattttgtcaaaatctatttggatcctttttcgaccacaatttttt |
7303830 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
| ||||||||||||||||||| | | |||||||||||||| |||||| | ||||| || ||||||||| ||||| ||||||||| ||||| |
|
|
| T |
7303829 |
gttttcttatgacacggatcagctgttttttttatttgcctccaaatccgataaataacatctttggagactgaaaaa-taagatgccaatgttttgaca |
7303731 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
7303730 |
atccctttacaaagttttccattataacttgtatttaacaacaaatgagaaacaagcttccgttgattgttgtccaaaaaagaacgcttgttattagatc |
7303631 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||| |
|
|
| T |
7303630 |
gttgaatttcctcaacgataattgcctctgcatgattaataaaagaagtttttgttgttactaaatagaaga |
7303559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 340 - 711
Target Start/End: Original strand, 16444256 - 16444626
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16444256 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaacgaaacattgcgcattttgtcaaaatctatttggatcctttttcgaccacaatttttt |
16444355 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
| ||||||||||||||||||| | | |||||||||||||| |||||| | ||||| || ||||||||| ||||| ||||||||| ||||| |
|
|
| T |
16444356 |
gttttcttatgacacggatcagctgttttttttatttgcctccaaatccgataaataacatctttggagactgaaaaa-taagatgccaatgttttgaca |
16444454 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
16444455 |
atccctttacaaagttttccattataacttgtatttaacaacaaatgagaaataagcttccgttgattgttgtccaaaaaagaacgcttgttattagatc |
16444554 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||| |
|
|
| T |
16444555 |
gttgaatttcctcaacgataattgcctctgcatgattaataaaagaagtttttgttgttactaaatagaaga |
16444626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 275; Significance: 1e-153; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 24742328 - 24741994
Alignment:
| Q |
8 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaa |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
24742328 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactattggaaagcaaccaatttttcctgagaaggtctcattaccatcaccatcaa |
24742229 |
T |
|
| Q |
108 |
atcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaata |
207 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| |
|
|
| T |
24742228 |
atcttggcctagccacaacaactaaaaacatgaccttaccgatgtaatttttgttcctacacatacgatgtggctcatcctcatcagcaagaaggtaata |
24742129 |
T |
|
| Q |
208 |
gttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctca |
307 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
24742128 |
gtttgatgactttttcgttatatagaaccatttttcatcaatgtgaacaacattatacataggcttaaacacttgatcatgtggtatgctactctcctca |
24742029 |
T |
|
| Q |
308 |
agcatatccaagcataattcaatacgagctttcaa |
342 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |
|
|
| T |
24742028 |
agcatatccaagcagaattcaatacgagctttcaa |
24741994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 13 - 342
Target Start/End: Complemental strand, 4203057 - 4202728
Alignment:
| Q |
13 |
aggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaaatctt |
112 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
4203057 |
aggtctattgatgctagacctttgtgttggtaccttgtgaactattggaaaacaaccaatttttcatgagaaggtctcattatcatcatcatcaaatctt |
4202958 |
T |
|
| Q |
113 |
ggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaatagttcg |
212 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
4202957 |
ggcctagccacaacaactaaaaacatgaccttaccgatgtaatttttgttcctacacatacgatgtggctcatcctcatctacaagaaggtaatagttcg |
4202858 |
T |
|
| Q |
213 |
atgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctcaagcat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
4202857 |
atgactttttcgttatgtagaaccatttttcatcaatgtaaacaacattatacatatgcttaaacactggatcatgtggtatgctactctcctcaagcat |
4202758 |
T |
|
| Q |
313 |
atccaagcataattcaatacgagctttcaa |
342 |
Q |
| |
|
||||||||| |||||||||||||||||||| |
|
|
| T |
4202757 |
atccaagcagaattcaatacgagctttcaa |
4202728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 340 - 711
Target Start/End: Complemental strand, 24741897 - 24741527
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24741897 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
24741798 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
24741797 |
gatttcttatgacacggatcacccgttttttttacttgcctccaaatccgataaatgacatcttgagagactgaaaaa-taagatgccaatgttctgaca |
24741699 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24741698 |
atcccacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagtttccgttgattgttgtcgagaaaagaacgtttgttattagatt |
24741599 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
24741598 |
gttcaatttcctcaacgataattgcctctacatgattaaaaaaagaagttcttattgttattatatacaaga |
24741527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 340 - 711
Target Start/End: Complemental strand, 4202631 - 4202270
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4202631 |
caagacagtttgtaaagattgaaaagtgctacgcttagctaatgaagcattgcacattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
4202532 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||| ||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
4202531 |
gatttcttatgacacggatcacccgttttttttacttgcctccatatccgataaatgacatcttgagagactgaaaaa-taagatgccaatgttctgaca |
4202433 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4202432 |
atcccacgat---------cattataacttgaatttaacaataaatgagaaacaagctttcgttgattgttgtcgagaaaagaacgtttgttattagatt |
4202342 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
4202341 |
gttgaatttcctcaacgataatttcctctgcatgattaaaaaaagaagttcttattgttattaaatacaaga |
4202270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 313
Target Start/End: Complemental strand, 8186901 - 8186655
Alignment:
| Q |
67 |
accaatttttcttgagaaggtctcattaccatcatcatcaaatcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttccta |
166 |
Q |
| |
|
||||||||||| ||| || ||||| || || |||||||||||||| || ||||||| |||||||| ||||||||||||||| ||||||||| || | |
|
|
| T |
8186901 |
accaatttttcctgaaaaagtctcttttccttcatcatcaaatctaggtctagccactgcaactaaaaacatgaccttaccaaggtaatttttattgttg |
8186802 |
T |
|
| Q |
167 |
cacatatgatgtggctcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattataca |
266 |
Q |
| |
|
| | | | |||||||||||| |||||| |||||||||||| | |||||||| || ||||| || ||||| ||||| ||||| ||||||||||||| |
|
|
| T |
8186801 |
gatgtgcggtatggctcatcctcgtctgcaataaggtaatagtttgcggactttttagtcatgtaaaatcatttctcatctatgtgcacaacattataca |
8186702 |
T |
|
| Q |
267 |
taggcttaaacagtggatcatatggtatgctactctcctcaagcata |
313 |
Q |
| |
|
| | |||||| ||||| ||| || |||||| | |||||||||||| |
|
|
| T |
8186701 |
tggacttaaattgtggaacatgaggaatgctagtttcctcaagcata |
8186655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 313
Target Start/End: Original strand, 8191386 - 8191574
Alignment:
| Q |
125 |
acaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaatagttcga-tgactttttc |
223 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| || | | | | | ||||||||||||||||||| ||| ||||||||| | ||| ||||| |
|
|
| T |
8191386 |
acaactaaaaacatgaccttaccaaggtaatttttattgttggatgtgcggtatggctcatcctcatctgcaagaaagtaatagtttgcgtga-ttttta |
8191484 |
T |
|
| Q |
224 |
gttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctcaagcata |
313 |
Q |
| |
|
|| ||||| |||||||| ||||| ||||| |||||||||||||| | |||||| ||||| ||| || |||||| | |||||||||||| |
|
|
| T |
8191485 |
gtcatgtaaaaccatttctcatctatgtgcacaacattatacatggacttaaattgtggaccatgaggaatgctagtttcctcaagcata |
8191574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 260; Significance: 1e-144; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 340 - 711
Target Start/End: Original strand, 25996690 - 25997060
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25996690 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
25996789 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
25996790 |
gatttcttatgacacggatcacccgttttttttacttgcctccaaatccgataaatgacatcttgagagactgaaaaa-taagatgccaatgttctgaca |
25996888 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25996889 |
atctcacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatt |
25996988 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
25996989 |
gttcaatttcctcaacgataattgcctctacatgattaaaaaaagaagttcttattgttattatatacaaga |
25997060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 8696230 - 8696303
Alignment:
| Q |
221 |
ttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtat |
294 |
Q |
| |
|
||||| || |||||||||||||| |||||||||| || |||||||||| ||||||| |||||||| |||||| |
|
|
| T |
8696230 |
ttcgtcatatagaaccatttttcgtcaatgtgaataatattatacatacttttaaacattggatcatgtggtat |
8696303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 3792025 - 3792149
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
3792025 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
3792124 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
3792125 |
gctcaaatggaatgctactttcctc |
3792149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 8 - 340
Target Start/End: Complemental strand, 6124538 - 6124206
Alignment:
| Q |
8 |
ccggcaggtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaa |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
6124538 |
ccggcaggcctattgatgctagacctttgtgctgctaccttgtgaactataggaaagcaaccaatttttcctgagaatgtctcgttaccatcatcatcaa |
6124439 |
T |
|
| Q |
108 |
atcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaata |
207 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
6124438 |
atcttggcctagccacgacaactaaaaacattaccttaccaatgtaatttttgttcctacacatacgatgtggctcatcctcatctccaagaaggtaata |
6124339 |
T |
|
| Q |
208 |
gttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctca |
307 |
Q |
| |
|
| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
6124338 |
gctggatgactttttggttatgtagaaccatttttcatctatgtgaacaacattatacataggtttaaacactggatcatgtggtatgctactctcctca |
6124239 |
T |
|
| Q |
308 |
agcatatccaagcataattcaatacgagctttc |
340 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
6124238 |
agcatatccaagcagaattcaatacgagctttc |
6124206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 340 - 711
Target Start/End: Complemental strand, 6124107 - 6123737
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| | | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6124107 |
caagacagtttgtaaagatcgaagaatgctacgcttagctaacgaaacattgcgcattttgtcaaaatctatttggatcctttttcgaccacaatttttt |
6124008 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnnacttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgaca |
539 |
Q |
| |
|
| ||||||||||||||||||| | | |||||||||||||| |||||| | ||||| || ||||||||| ||||| ||||||||| ||||| |
|
|
| T |
6124007 |
gttttcttatgacacggatcagctgttttttttatttgcctccaaatccgataaataacatctttggagactgaaaaa-taagatgccaatgttttgaca |
6123909 |
T |
|
| Q |
540 |
atccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagatc |
639 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
6123908 |
atccctttacaaagttttccattataacttgtatttaacaacaaatgagaaacaagcttccgttgattgttgtccaaaaaagaacgcttgttattagatc |
6123809 |
T |
|
| Q |
640 |
gttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||| |
|
|
| T |
6123808 |
gttgaatttcctcaacgataattgcctctgcatgattaataaaagaagtttttgttgttactaaatagaaga |
6123737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 1653929 - 1653805
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
1653929 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
1653830 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
1653829 |
gctcaaatggaatgctactttcctc |
1653805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 9130273 - 9130397
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
9130273 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
9130372 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
9130373 |
gctcaaatggaatgctactttcctc |
9130397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 37151584 - 37151460
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
37151584 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
37151485 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
37151484 |
gctcaaatggaatgctactttcctc |
37151460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 45221903 - 45221779
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
45221903 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
45221804 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
45221803 |
gctcaaatggaatgctactttcctc |
45221779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 15 - 341
Target Start/End: Original strand, 10368617 - 10368943
Alignment:
| Q |
15 |
gtctattgatgctagacctttgtgctggtaccttgtgaactataggaaagcaaccaatttttcttgagaaggtctcattaccatcatcatcaaatcttgg |
114 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10368617 |
gtctattgatgctagacctttgtgttggtaccttgtgaactataggaaagcaaccaatttttcctgagaaggtctcattaccatcatcgtcaaatcttgg |
10368716 |
T |
|
| Q |
115 |
cctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatcctcatctgcaggaaggtaatagttcgat |
214 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
10368717 |
cctagccacaacaactaaaaacatgaccttaccaatgtaatttttgttcctacacatacgatgtggctaatcctcatttgcaagaaggtaatagttcgat |
10368816 |
T |
|
| Q |
215 |
gactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtatgctactctcctcaagcatat |
314 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | |
|
|
| T |
10368817 |
gaaaatttggttatttagaaccatttttcatctacgtgaacaacattatacataggcttaaacactggatcatgtggtatgctactctcctcaaccattt |
10368916 |
T |
|
| Q |
315 |
ccaagcataattcaatacgagctttca |
341 |
Q |
| |
|
||||||| |||||||||||| |||||| |
|
|
| T |
10368917 |
ccaagcagaattcaatacgaactttca |
10368943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 340 - 711
Target Start/End: Original strand, 10369041 - 10369412
Alignment:
| Q |
340 |
caagacagtttgtaaagatcgaagagtgctacgcttagtttatgaagcattgcgcattttgtcgaaatctatttggatcctttttcgaccacaatttttt |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10369041 |
caagacagtttgtaaagatcgaagagtgctacgcttagctaatgaaacattgcacattttgtggaaatctattttgatcctttttcgaccacaatttttt |
10369140 |
T |
|
| Q |
440 |
gatttcttatgacacggatcacccnnnnnnnnn-acttgcctccaaatccaataaatgatatcttcagaaactgaaaaaataagaggccaatgttctgac |
538 |
Q |
| |
|
| |||||||||||||||||||||| | |||||||||||||| ||||| || ||||| ||| ||||||||| ||||| | |||||||||||| |
|
|
| T |
10369141 |
gttttcttatgacacggatcacccgtttttttttatttgcctccaaatccgataaaggacatcttgagagactgaaaaa-taagatgtcaatgttctgac |
10369239 |
T |
|
| Q |
539 |
aatccaacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttccgttgattgttgtcgagaaaagaacgtttgttattagat |
638 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10369240 |
aatcccacgacaaagttttccattataacttgaatttaacaataaatgagaaacaagcttctgttggttgttgtcgagaaaagaacgtttgttattagat |
10369339 |
T |
|
| Q |
639 |
cgttgaatttcctcaacgataattgcctctgcatgattnnnnnnngaagttcttgttgttattaaatacaaga |
711 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10369340 |
cgttgaatttcctcaacgataattgcctctgcatgattaaaaaaagaagttcttgttgttattaaatacaaga |
10369412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 276
Target Start/End: Complemental strand, 45488984 - 45488775
Alignment:
| Q |
67 |
accaatttttcttgagaaggtctcattaccatcatcatcaaatcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttccta |
166 |
Q |
| |
|
||||||||||| ||| || ||||| || || |||||||||||||| || ||||||| |||||||| |||| |||||||||| ||||||||| || | |
|
|
| T |
45488984 |
accaatttttcctgaaaatgtctcttttccttcatcatcaaatctaggtctagccactgcaactaaaaacattaccttaccaaggtaatttttattgttg |
45488885 |
T |
|
| Q |
167 |
cacatatgatgtggctcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattataca |
266 |
Q |
| |
|
| | | | ||||| || |||||||||| ||||||||||||| | | |||||| || ||||| |||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
45488884 |
gatgtgcggtatggcttattctcatctgcaagaaggtaatagtttgcggtctttttagtcatgtaaaaccatttctcatctatgtgcacaacattataca |
45488785 |
T |
|
| Q |
267 |
taggcttaaa |
276 |
Q |
| |
|
| | |||||| |
|
|
| T |
45488784 |
tggacttaaa |
45488775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 12812462 - 12812586
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
12812462 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
12812561 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
12812562 |
gctcaaatggaatgctactttcctc |
12812586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 585
Target Start/End: Complemental strand, 10370791 - 10370760
Alignment:
| Q |
554 |
ttttccattataacttgaatttaacaataaat |
585 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
10370791 |
ttttccattataacttgaatttaacaataaat |
10370760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 34224019 - 34224092
Alignment:
| Q |
221 |
ttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtggatcatatggtat |
294 |
Q |
| |
|
||||| || |||||||||||||| |||||||||| || |||||||||| ||||||| |||||||| |||||| |
|
|
| T |
34224019 |
ttcgtcatatagaaccatttttcgtcaatgtgaataatattatacatacttttaaacattggatcatgtggtat |
34224092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 18496046 - 18496152
Alignment:
| Q |
87 |
tctcattaccatcatcatcaaatcttggcctagccataacaactaaagacatgaccttaccaatgtaatttttgttcctacacatatgatgtggctcatc |
186 |
Q |
| |
|
|||| |||||||||||||||||||| | | |||||| | |||||| ||||||||||| |||||| |||||||| | |||| | ||||||| ||| | |
|
|
| T |
18496046 |
tctctttaccatcatcatcaaatctaagtcgagccattgcgactaaaaacatgaccttagtaatgtagtttttgtttttgcacagacgatgtgggtcaac |
18496145 |
T |
|
| Q |
187 |
ctcatct |
193 |
Q |
| |
|
||||||| |
|
|
| T |
18496146 |
ctcatct |
18496152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 23779857 - 23779733
Alignment:
| Q |
182 |
tcatcctcatctgcaggaaggtaatagttcgatgactttttcgttatgtagaaccatttttcatcaatgtgaacaacattatacataggcttaaacagtg |
281 |
Q |
| |
|
||||||||||||||| |||||||||| ||| || ||||| || | |||||||| |||||||| ||||||| |||||| | ||| | ||||||| || |
|
|
| T |
23779857 |
tcatcctcatctgcaagaaggtaataattctgagattttttggtcacatagaaccacttttcatctatgtgaataacattgtgcattgacttaaactttg |
23779758 |
T |
|
| Q |
282 |
gatcatatggtatgctactctcctc |
306 |
Q |
| |
|
| ||| |||| |||||||| ||||| |
|
|
| T |
23779757 |
gctcaaatggaatgctactttcctc |
23779733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 959 times since January 2019
Visitors: 4362