View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0707_1D_low_31 (Length: 238)

Name: NF0707_1D_low_31
Description: NF0707_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0707_1D_low_31
NF0707_1D_low_31
[»] chr7 (48 HSPs)
chr7 (26-234)||(21140978-21141186)
chr7 (1-135)||(24339596-24339730)
chr7 (37-143)||(17851377-17851483)
chr7 (35-144)||(11061081-11061190)
chr7 (2-143)||(26329354-26329495)
chr7 (1-85)||(26033432-26033516)
chr7 (9-81)||(15902830-15902902)
chr7 (1-97)||(32308112-32308208)
chr7 (24-143)||(1433400-1433519)
chr7 (5-98)||(11831423-11831516)
chr7 (1-89)||(11665411-11665499)
chr7 (1-143)||(5409813-5409949)
chr7 (45-143)||(25481848-25481946)
chr7 (14-143)||(1885519-1885648)
chr7 (35-140)||(26733253-26733358)
chr7 (50-114)||(2034416-2034480)
chr7 (43-115)||(5235960-5236032)
chr7 (1-97)||(2334240-2334337)
chr7 (36-115)||(4017800-4017879)
chr7 (25-96)||(7328686-7328757)
chr7 (12-90)||(9408316-9408394)
chr7 (25-143)||(22602705-22602823)
chr7 (36-90)||(23751899-23751953)
chr7 (26-124)||(27945006-27945104)
chr7 (102-143)||(9778454-9778495)
chr7 (1-97)||(6630883-6630979)
chr7 (13-89)||(8160416-8160492)
chr7 (13-90)||(11272569-11272648)
chr7 (35-115)||(49107795-49107874)
chr7 (36-143)||(13770637-13770744)
chr7 (35-114)||(19206025-19206104)
chr7 (36-116)||(21864779-21864861)
chr7 (65-116)||(24105651-24105702)
chr7 (56-118)||(11722124-11722186)
chr7 (35-97)||(15680801-15680863)
chr7 (35-89)||(19992001-19992055)
chr7 (43-97)||(41020488-41020542)
chr7 (57-115)||(43027496-43027554)
chr7 (9-90)||(7438705-7438786)
chr7 (1-30)||(15680857-15680886)
chr7 (35-143)||(18213038-18213147)
chr7 (4-97)||(25822647-25822740)
chr7 (36-81)||(29812670-29812715)
chr7 (36-125)||(43249957-43250046)
chr7 (35-83)||(3721099-3721147)
chr7 (37-97)||(23784352-23784412)
chr7 (44-96)||(29787383-29787435)
chr7 (37-97)||(42720897-42720957)
[»] chr8 (47 HSPs)
chr8 (1-143)||(2572027-2572169)
chr8 (1-143)||(22651922-22652064)
chr8 (1-143)||(29510275-29510417)
chr8 (2-143)||(24362173-24362315)
chr8 (8-97)||(15816107-15816196)
chr8 (10-113)||(11927066-11927169)
chr8 (4-99)||(29447084-29447179)
chr8 (3-89)||(21465412-21465498)
chr8 (33-118)||(27213518-27213603)
chr8 (35-143)||(926793-926901)
chr8 (1-113)||(11944641-11944753)
chr8 (1-116)||(8343289-8343404)
chr8 (1-143)||(22197713-22197855)
chr8 (35-116)||(20873042-20873123)
chr8 (36-97)||(34897077-34897138)
chr8 (43-99)||(39954292-39954348)
chr8 (45-143)||(4673440-4673537)
chr8 (35-97)||(13844601-13844663)
chr8 (7-89)||(25172675-25172757)
chr8 (35-116)||(4298891-4298972)
chr8 (66-143)||(24857955-24858032)
chr8 (20-89)||(25566841-25566910)
chr8 (19-119)||(13436953-13437053)
chr8 (37-97)||(27101507-27101566)
chr8 (35-90)||(8342971-8343026)
chr8 (35-90)||(12606834-12606889)
chr8 (38-89)||(14731712-14731763)
chr8 (37-143)||(20785472-20785572)
chr8 (44-143)||(37283824-37283923)
chr8 (36-119)||(39820399-39820482)
chr8 (51-114)||(41838144-41838207)
chr8 (37-83)||(3025557-3025603)
chr8 (1-99)||(12570480-12570577)
chr8 (54-108)||(12936515-12936569)
chr8 (2-90)||(13845233-13845322)
chr8 (35-97)||(31236582-31236644)
chr8 (93-143)||(43737876-43737926)
chr8 (9-90)||(4611533-4611614)
chr8 (1-30)||(5813640-5813669)
chr8 (102-143)||(24413632-24413673)
chr8 (35-116)||(25192352-25192433)
chr8 (4-69)||(26902149-26902214)
chr8 (1-66)||(29447467-29447532)
chr8 (12-113)||(36934646-36934747)
chr8 (51-119)||(949285-949353)
chr8 (35-83)||(34222953-34223001)
chr8 (4-32)||(34451006-34451034)
[»] chr6 (64 HSPs)
chr6 (1-143)||(16766643-16766785)
chr6 (35-143)||(7938062-7938170)
chr6 (1-143)||(9107341-9107483)
chr6 (1-143)||(10294053-10294195)
chr6 (9-143)||(5970087-5970215)
chr6 (1-124)||(8365490-8365613)
chr6 (4-143)||(18367783-18367921)
chr6 (9-145)||(5000605-5000741)
chr6 (45-143)||(8776988-8777086)
chr6 (15-97)||(10842524-10842606)
chr6 (51-124)||(853880-853953)
chr6 (35-140)||(7977835-7977940)
chr6 (26-143)||(9027124-9027241)
chr6 (38-143)||(10888982-10889087)
chr6 (35-114)||(7086770-7086849)
chr6 (44-143)||(8805586-8805685)
chr6 (1-139)||(3209332-3209476)
chr6 (41-126)||(7625085-7625170)
chr6 (3-96)||(9195727-9195820)
chr6 (4-97)||(16488564-16488657)
chr6 (14-143)||(21395292-21395420)
chr6 (35-143)||(426519-426627)
chr6 (1-97)||(26562681-26562777)
chr6 (36-119)||(6389713-6389796)
chr6 (1-143)||(9629330-9629471)
chr6 (1-143)||(10339096-10339239)
chr6 (43-113)||(3398595-3398664)
chr6 (35-141)||(5732515-5732621)
chr6 (1-111)||(25038042-25038152)
chr6 (35-125)||(34595098-34595188)
chr6 (9-97)||(8713971-8714060)
chr6 (24-116)||(12696297-12696389)
chr6 (45-97)||(17841604-17841656)
chr6 (36-143)||(13851682-13851789)
chr6 (36-126)||(2153893-2153983)
chr6 (1-82)||(9522898-9522979)
chr6 (5-141)||(4118308-4118444)
chr6 (21-97)||(7723241-7723317)
chr6 (37-97)||(17341671-17341731)
chr6 (37-97)||(19040344-19040404)
chr6 (3-143)||(31384866-31385005)
chr6 (43-90)||(7996391-7996438)
chr6 (43-90)||(8022363-8022410)
chr6 (26-89)||(9025490-9025553)
chr6 (43-114)||(9658854-9658925)
chr6 (4-81)||(17168442-17168514)
chr6 (36-83)||(24832594-24832641)
chr6 (45-140)||(25096372-25096467)
chr6 (35-82)||(26178686-26178733)
chr6 (33-124)||(30866147-30866238)
chr6 (50-81)||(34447378-34447409)
chr6 (35-97)||(7265598-7265660)
chr6 (26-116)||(10770670-10770760)
chr6 (38-88)||(13689500-13689550)
chr6 (35-97)||(20371115-20371177)
chr6 (35-97)||(33001294-33001356)
chr6 (43-97)||(1532230-1532286)
chr6 (1-82)||(7248365-7248446)
chr6 (35-116)||(16833281-16833362)
chr6 (1-30)||(28152146-28152175)
chr6 (94-143)||(29220202-29220251)
chr6 (20-125)||(34073337-34073442)
chr6 (20-96)||(8931592-8931668)
chr6 (13-81)||(9617442-9617510)
[»] chr5 (56 HSPs)
chr5 (2-143)||(21522696-21522837)
chr5 (2-143)||(21533262-21533403)
chr5 (10-143)||(19579647-19579780)
chr5 (1-143)||(15382423-15382562)
chr5 (4-143)||(6401444-6401583)
chr5 (13-140)||(13287383-13287509)
chr5 (1-119)||(36642733-36642851)
chr5 (1-135)||(21541984-21542118)
chr5 (1-89)||(39698541-39698629)
chr5 (3-90)||(11685938-11686024)
chr5 (1-90)||(7677704-7677793)
chr5 (35-132)||(21191061-21191158)
chr5 (4-97)||(21814253-21814346)
chr5 (43-124)||(22013379-22013460)
chr5 (33-97)||(14674261-14674325)
chr5 (3-90)||(3966502-3966589)
chr5 (35-102)||(23220970-23221037)
chr5 (12-126)||(37328826-37328940)
chr5 (36-143)||(23015995-23016104)
chr5 (4-81)||(30098334-30098411)
chr5 (12-144)||(41995416-41995546)
chr5 (50-126)||(19552563-19552639)
chr5 (38-97)||(39205872-39205931)
chr5 (50-140)||(16304444-16304534)
chr5 (35-97)||(28588679-28588741)
chr5 (36-81)||(5467984-5468029)
chr5 (35-119)||(6247592-6247676)
chr5 (43-83)||(12927660-12927700)
chr5 (35-83)||(23012413-23012461)
chr5 (35-143)||(24906306-24906414)
chr5 (37-97)||(27144455-27144515)
chr5 (1-97)||(31084315-31084405)
chr5 (35-90)||(16203800-16203855)
chr5 (61-124)||(19820425-19820488)
chr5 (45-143)||(6326312-6326410)
chr5 (4-90)||(18592072-18592158)
chr5 (102-140)||(20683330-20683368)
chr5 (36-118)||(25863175-25863257)
chr5 (66-116)||(30135286-30135336)
chr5 (35-97)||(33178017-33178079)
chr5 (40-126)||(42469184-42469270)
chr5 (1-81)||(43554529-43554604)
chr5 (50-143)||(6770489-6770582)
chr5 (13-89)||(17088284-17088361)
chr5 (8-89)||(25817495-25817576)
chr5 (1-82)||(26609360-26609441)
chr5 (1-90)||(32766914-32767003)
chr5 (36-109)||(34879330-34879403)
chr5 (35-88)||(36838544-36838597)
chr5 (13-97)||(6035475-6035558)
chr5 (43-79)||(10022642-10022678)
chr5 (5-97)||(12641666-12641758)
chr5 (63-143)||(17177056-17177136)
chr5 (36-88)||(21576751-21576803)
chr5 (43-99)||(35017027-35017083)
chr5 (36-80)||(39696005-39696049)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-125)||(241558-241682)
[»] chr1 (55 HSPs)
chr1 (1-112)||(9629871-9629982)
chr1 (37-143)||(398772-398878)
chr1 (1-143)||(1486686-1486822)
chr1 (1-126)||(40917714-40917837)
chr1 (1-143)||(6612142-6612284)
chr1 (1-98)||(9828035-9828132)
chr1 (35-143)||(10577740-10577848)
chr1 (4-143)||(47989444-47989582)
chr1 (45-143)||(16297298-16297396)
chr1 (9-143)||(31694689-31694823)
chr1 (9-79)||(44482240-44482310)
chr1 (35-97)||(46348388-46348450)
chr1 (35-143)||(38078666-38078769)
chr1 (35-143)||(38503266-38503374)
chr1 (33-116)||(48450590-48450673)
chr1 (1-116)||(5944254-5944371)
chr1 (3-89)||(34371714-34371799)
chr1 (35-97)||(36878453-36878515)
chr1 (37-126)||(15323126-15323215)
chr1 (35-143)||(22881621-22881723)
chr1 (10-79)||(25361896-25361965)
chr1 (4-97)||(32461438-32461530)
chr1 (13-117)||(5376483-5376587)
chr1 (35-143)||(42359454-42359562)
chr1 (45-124)||(5927355-5927434)
chr1 (52-143)||(9103586-9103677)
chr1 (45-116)||(14359537-14359607)
chr1 (43-142)||(23531791-23531890)
chr1 (56-118)||(1262855-1262917)
chr1 (43-97)||(16927198-16927252)
chr1 (35-89)||(22515892-22515946)
chr1 (4-54)||(25934651-25934701)
chr1 (7-89)||(28273065-28273147)
chr1 (43-97)||(34257923-34257977)
chr1 (50-143)||(2896141-2896234)
chr1 (50-107)||(12443480-12443537)
chr1 (26-119)||(20157346-20157439)
chr1 (45-97)||(113291-113343)
chr1 (1-97)||(18556427-18556523)
chr1 (35-143)||(41877475-41877583)
chr1 (35-90)||(1864885-1864940)
chr1 (1-97)||(17831504-17831598)
chr1 (33-88)||(31015044-31015099)
chr1 (35-97)||(21530681-21530743)
chr1 (35-89)||(25272482-25272536)
chr1 (35-81)||(52903257-52903303)
chr1 (50-143)||(21366040-21366133)
chr1 (1-30)||(37598879-37598908)
chr1 (35-124)||(39130772-39130861)
chr1 (71-124)||(48040503-48040556)
chr1 (51-111)||(2851000-2851059)
chr1 (1-81)||(16164286-16164366)
chr1 (37-81)||(23804436-23804480)
chr1 (43-119)||(34298406-34298482)
chr1 (79-143)||(41597519-41597583)
[»] chr3 (58 HSPs)
chr3 (3-143)||(15796267-15796407)
chr3 (2-143)||(750590-750732)
chr3 (50-143)||(3164045-3164138)
chr3 (50-143)||(10335306-10335399)
chr3 (1-97)||(4987262-4987358)
chr3 (5-98)||(14209104-14209197)
chr3 (5-114)||(14216867-14216976)
chr3 (5-114)||(14222996-14223105)
chr3 (1-97)||(8039806-8039902)
chr3 (4-119)||(25064879-25064992)
chr3 (1-125)||(41961621-41961745)
chr3 (56-143)||(7171448-7171534)
chr3 (35-126)||(8383220-8383311)
chr3 (42-97)||(23870571-23870626)
chr3 (1-107)||(14832081-14832187)
chr3 (35-125)||(28917965-28918055)
chr3 (9-137)||(16192729-16192857)
chr3 (4-143)||(21479070-21479198)
chr3 (14-89)||(1509539-1509614)
chr3 (4-83)||(11665950-11666029)
chr3 (36-143)||(24205047-24205154)
chr3 (36-143)||(35994744-35994850)
chr3 (45-143)||(10268501-10268599)
chr3 (4-82)||(17005593-17005671)
chr3 (50-143)||(16000036-16000129)
chr3 (7-143)||(34307763-34307893)
chr3 (9-98)||(34910308-34910397)
chr3 (35-124)||(55401040-55401129)
chr3 (45-143)||(14747513-14747606)
chr3 (35-143)||(38731164-38731272)
chr3 (12-119)||(14829660-14829766)
chr3 (45-116)||(26492220-26492291)
chr3 (13-143)||(4990950-4991080)
chr3 (93-143)||(14027961-14028011)
chr3 (50-116)||(14223873-14223939)
chr3 (36-98)||(15864824-15864886)
chr3 (3-81)||(16789020-16789098)
chr3 (102-143)||(10318112-10318153)
chr3 (35-116)||(26508083-26508164)
chr3 (1-98)||(28812506-28812603)
chr3 (1-90)||(55212962-55213050)
chr3 (38-90)||(11313808-11313860)
chr3 (1-97)||(34185094-34185190)
chr3 (35-90)||(7928449-7928504)
chr3 (36-82)||(29508451-29508497)
chr3 (37-83)||(49505161-49505207)
chr3 (1-30)||(10955000-10955029)
chr3 (50-95)||(14979175-14979220)
chr3 (56-97)||(15544685-15544726)
chr3 (36-113)||(25326402-25326479)
chr3 (44-89)||(27277852-27277897)
chr3 (14-83)||(28678309-28678378)
chr3 (37-90)||(32804547-32804600)
chr3 (56-97)||(40052324-40052365)
chr3 (1-30)||(55401123-55401152)
chr3 (43-115)||(14840304-14840376)
chr3 (35-99)||(21256991-21257055)
chr3 (35-143)||(25093448-25093556)
[»] scaffold0053 (2 HSPs)
scaffold0053 (35-143)||(8744-8852)
scaffold0053 (1-30)||(8846-8875)
[»] chr4 (42 HSPs)
chr4 (36-143)||(24343453-24343560)
chr4 (1-145)||(30982849-30982990)
chr4 (1-94)||(30838205-30838298)
chr4 (1-143)||(19482614-19482756)
chr4 (35-143)||(23292991-23293099)
chr4 (1-139)||(27706148-27706286)
chr4 (35-136)||(35157990-35158091)
chr4 (4-119)||(5414146-5414261)
chr4 (4-99)||(24613675-24613770)
chr4 (66-143)||(20633431-20633508)
chr4 (1-97)||(22234861-22234958)
chr4 (14-114)||(7012041-7012141)
chr4 (1-143)||(903868-904010)
chr4 (13-81)||(40742599-40742667)
chr4 (56-135)||(20521875-20521954)
chr4 (4-142)||(847898-848036)
chr4 (7-89)||(51701258-51701340)
chr4 (38-143)||(36635270-36635375)
chr4 (4-89)||(46083965-46084050)
chr4 (52-96)||(5832716-5832760)
chr4 (35-143)||(12895279-12895387)
chr4 (13-96)||(14126093-14126177)
chr4 (36-83)||(999354-999401)
chr4 (35-90)||(2361980-2362035)
chr4 (51-114)||(11651155-11651218)
chr4 (22-124)||(28084486-28084589)
chr4 (35-125)||(21945467-21945557)
chr4 (43-97)||(35952630-35952684)
chr4 (37-143)||(44081584-44081690)
chr4 (35-89)||(54580028-54580082)
chr4 (1-30)||(34306786-34306815)
chr4 (45-90)||(38847027-38847072)
chr4 (44-89)||(56257933-56257978)
chr4 (9-97)||(4383360-4383447)
chr4 (42-98)||(6273935-6273991)
chr4 (7-95)||(13134444-13134532)
chr4 (35-115)||(16303271-16303351)
chr4 (1-69)||(19312355-19312423)
chr4 (35-143)||(33950082-33950190)
chr4 (7-91)||(38148702-38148786)
chr4 (49-97)||(50280873-50280921)
chr4 (2-30)||(54580006-54580034)
[»] chr2 (46 HSPs)
chr2 (35-124)||(20539679-20539768)
chr2 (4-143)||(34784956-34785095)
chr2 (1-143)||(26769463-26769599)
chr2 (38-144)||(21616707-21616813)
chr2 (1-74)||(35056883-35056956)
chr2 (36-126)||(23354658-23354748)
chr2 (1-126)||(15657827-15657952)
chr2 (5-90)||(30717505-30717590)
chr2 (1-89)||(44860320-44860408)
chr2 (44-143)||(28412296-28412395)
chr2 (1-83)||(27286263-27286345)
chr2 (5-82)||(4207864-4207940)
chr2 (45-114)||(12940950-12941019)
chr2 (1-146)||(36756315-36756460)
chr2 (25-81)||(30527590-30527646)
chr2 (35-83)||(34691810-34691858)
chr2 (35-83)||(34714222-34714270)
chr2 (4-126)||(18054777-18054900)
chr2 (7-97)||(12668400-12668490)
chr2 (4-107)||(22084804-22084909)
chr2 (36-90)||(37411250-37411304)
chr2 (12-97)||(4882678-4882763)
chr2 (9-89)||(11223842-11223922)
chr2 (35-90)||(14996228-14996284)
chr2 (35-143)||(18276467-18276575)
chr2 (35-119)||(31018560-31018644)
chr2 (1-97)||(37419735-37419831)
chr2 (37-124)||(23355002-23355089)
chr2 (35-124)||(19536402-19536492)
chr2 (45-143)||(30335363-30335461)
chr2 (57-143)||(31283994-31284080)
chr2 (44-114)||(36409641-36409711)
chr2 (6-83)||(6045892-6045969)
chr2 (1-30)||(15972921-15972950)
chr2 (102-143)||(18631471-18631512)
chr2 (44-97)||(21782832-21782885)
chr2 (35-116)||(23717999-23718080)
chr2 (35-116)||(24105671-24105752)
chr2 (1-90)||(24975297-24975385)
chr2 (1-30)||(28596517-28596546)
chr2 (50-119)||(30298467-30298536)
chr2 (35-116)||(30404855-30404936)
chr2 (4-97)||(36096349-36096442)
chr2 (9-89)||(19614183-19614263)
chr2 (21-144)||(23058433-23058557)
chr2 (43-143)||(40361767-40361867)
[»] scaffold0116 (1 HSPs)
scaffold0116 (35-143)||(9844-9952)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-133)||(263347-263475)
[»] scaffold0027 (1 HSPs)
scaffold0027 (45-143)||(46628-46726)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-119)||(53154-53268)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-89)||(44496-44584)
[»] scaffold0652 (1 HSPs)
scaffold0652 (35-145)||(467-577)
[»] scaffold0223 (1 HSPs)
scaffold0223 (22-124)||(20137-20239)
[»] scaffold0021 (1 HSPs)
scaffold0021 (35-143)||(130428-130536)
[»] scaffold0024 (1 HSPs)
scaffold0024 (14-81)||(68226-68293)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-97)||(71715-71813)
[»] scaffold0018 (1 HSPs)
scaffold0018 (45-119)||(178833-178908)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-143)||(225274-225381)
[»] scaffold0475 (1 HSPs)
scaffold0475 (73-143)||(3262-3332)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-82)||(9721-9799)
[»] scaffold0168 (1 HSPs)
scaffold0168 (13-142)||(20990-21119)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-90)||(3820-3909)
[»] scaffold0306 (1 HSPs)
scaffold0306 (8-124)||(13365-13476)
[»] scaffold0152 (1 HSPs)
scaffold0152 (8-124)||(21851-21962)
[»] scaffold0103 (1 HSPs)
scaffold0103 (45-97)||(51803-51855)
[»] scaffold0227 (1 HSPs)
scaffold0227 (38-97)||(7319-7378)
[»] scaffold0722 (1 HSPs)
scaffold0722 (52-94)||(7054-7096)
[»] scaffold0697 (1 HSPs)
scaffold0697 (35-97)||(1636-1698)
[»] scaffold0050 (2 HSPs)
scaffold0050 (35-97)||(70270-70332)
scaffold0050 (1-30)||(70326-70355)
[»] scaffold0011 (1 HSPs)
scaffold0011 (35-89)||(17754-17808)
[»] scaffold0512 (1 HSPs)
scaffold0512 (1-30)||(5018-5047)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-90)||(8606-8695)
[»] scaffold0236 (1 HSPs)
scaffold0236 (35-96)||(25773-25834)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-126)||(8629-8754)
scaffold0122 (57-97)||(8002-8042)
[»] scaffold0623 (1 HSPs)
scaffold0623 (4-116)||(5970-6082)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-89)||(6312-6400)
[»] scaffold0361 (1 HSPs)
scaffold0361 (45-97)||(14522-14574)
[»] scaffold0171 (2 HSPs)
scaffold0171 (24-116)||(23393-23485)
scaffold0171 (1-69)||(23531-23599)
[»] scaffold0066 (1 HSPs)
scaffold0066 (45-97)||(33378-33430)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-97)||(84944-85040)
[»] scaffold0020 (1 HSPs)
scaffold0020 (26-90)||(135308-135372)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 21140978 - 21141186
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||||||||| |||||||||||| ||||| |||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtg 21141077  T
Q  126 tacgtatccgtgcttcattatctatgtataaatgattttacctggctgaggttgagatgctttctgaggagttatttgagtaggatgatgttgtatcctc 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21141078 tccgtatccgtgcttcattatctatgtataaatgattttacctggctgaggttgagatgctttctgaggagttatttgagtaggatgatgttgtatcctc 21141177  T
Q  226 tttccgttg 234  Q
    |||||||||    
T  21141178 tttccgttg 21141186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24339730 - 24339596
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||| ||||||||||||||||||||||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||       
T  24339730 tcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaat 24339631  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
     ||| |||||||||||||| |||| | ||||||||    
T  24339630 gtccatgtcgtgtccggtgtccgtatccgtatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 17851483 - 17851377
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgt 136  Q
    ||||| |||||| ||||| |||||| ||||||| | ||||||||||| || |||| ||||||| |||| |||||||||||||| ||||||  ||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgtatccgt 17851384  T
Q  137 gcttcat 143  Q
    |||||||    
T  17851383 gcttcat 17851377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 11061081 - 11061190
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| | |||||||||| ||||||| ||||||||||||||||||||  ||||| |  |||||||||| |||| || |||||| |||||||    
T  11061081 ccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatcc 11061180  T
Q  135 gtgcttcatt 144  Q
    ||||||||||    
T  11061181 gtgcttcatt 11061190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 26329354 - 26329495
Alignment:
Q  2 cggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggca 101  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||| ||||| |||| | || |||| ||||||||||| |  ||||| |||||| |      
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    || ||||||||||| ||| ||||||  |||| ||||||||||    
T  26329454 tctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcat 26329495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26033432 - 26033516
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctg 85  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||    
T  26033432 tcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15902902 - 15902830
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||||||| |||||||| |  ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  15902902 gtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32308208 - 32308112
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| ||||||||||| ||||||||||||  | ||||| || ||| ||||| |||||| ||||||| ||||||||||||| |||||| ||||||    
T  32308208 tcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 32308112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 1433519 - 1433400
Alignment:
Q  24 ccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccg 123  Q
    |||||||||  ||||||| |||||| |||| |||| || ||||||| ||||||||||| | |||||| ||||||    |||||||||||| ||||| |||    
T  1433519 ccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccg 1433420  T
Q  124 tgtacgtatccgtgcttcat 143  Q
    ||  ||||||||||||||||    
T  1433419 tgcccgtatccgtgcttcat 1433400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 11831516 - 11831423
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    |||| |||||||||||||||||| ||||  |  | || | |||| |||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  11831516 acacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtcg 11831423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11665411 - 11665499
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||||||||||| ||||||||||| ||   |||||| |||||| | ||| |||||| ||||||| |||||||||||| ||||||    
T  11665411 tcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 5409813 - 5409949
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||||||||| |||||     |||||| | ||||  |||| |||||| ||||||| |||||||||||||||| ||  |||||| |     
T  5409813 tcggacacgtgtcgtgtccgacac-gacac-----cgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagt 5409906  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||| |||||| ||||||| | ||||  |||||||||||||||    
T  5409907 gtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcat 5409949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 25481946 - 25481848
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||    ||| ||| ||||||| || ||||||  |||||||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcat 25481848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 1885648 - 1885519
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgt 113  Q
    |||||||||||| ||||||  ||||||| | | || ||| | |||||| | ||||| ||||| | ||| | ||||||| ||||| | ||| |||||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgt 1885549  T
Q  114 ccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||| ||||||  |||||||||||||||    
T  1885548 ccggtgtccgtgtctgtatccgtgcttcat 1885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 26733358 - 26733253
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| | ||| |||||| ||||||| ||||||||||||| ||||||||||||| |  ||||||||||||| |||| | || | ||| |||    
T  26733358 ccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatccgtttcc 26733259  T
Q  135 gtgctt 140  Q
    ||||||    
T  26733258 gtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 2034480 - 2034416
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    ||||||||||||||||| || ||||||||||||  ||||||||||||  | ||||||||||||||    
T  2034480 acactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 5236032 - 5235960
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    |||||| |||||||||||||| ||||| | ||||||||||| ||||||||||||| |  || |||||||||||    
T  5236032 tataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2334337 - 2334240
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga--ttttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||||||||||||| |||||||  ||||||| | |||| |||||||||||| |||  |||| ||||||||||| || ||||| ||||||    
T  2334337 tcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtc 2334240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 4017800 - 4017879
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    |||||| ||| || ||||||||||||||  |||| ||||||||||| | |||||| ||||||||  ||||||||||||||    
T  4017800 cgacacttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 7328686 - 7328757
Alignment:
Q  25 cgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    ||||||||  ||||||| |||||| |||||||||||| | ||||| ||||||||||||| || |||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgt 7328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 9408316 - 9408394
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| |||||||| ||||  ||||||| | |||| |||||||||||| ||||||| |||||||||||  |||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcg 9408394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 22602705 - 22602823
Alignment:
Q  25 cgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||||  ||||||| |||||| ||||| |||||| ||||||| |||||| |||  | |||||| |||||| |   | |||||||||  |||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgt 22602804  T
Q  125 gtacgtatccgtgcttcat 143  Q
    || ||||||||| ||||||    
T  22602805 gtccgtatccgtccttcat 22602823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 23751953 - 23751899
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||||| || |||||||||||||| ||||||||||||||||| | ||||||    
T  23751953 cgacacctatgattacactaaattatatcattttatcaaattattatccgtgtcg 23751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 27945104 - 27945006
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    |||||||  ||||||| | |||| ||||| |||||| | ||||| ||||||||||||  |||||| |||||| |  |||||||||||||||||| ||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 27945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 9778495 - 9778454
Alignment:
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  9778495 tccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 9778454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6630883 - 6630979
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| ||||||| |||||||||||| ||||||   |||||| |||||| ||||| |||||  ||| ||| ||||||||||||  |||||| ||||||    
T  6630883 tcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtc 6630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 8160492 - 8160416
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||| ||||||||||||||  || |||| |||||| |||||||||||| | ||||| | ||||||||||| |||||    
T  8160492 cgtgttcgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 11272569 - 11272648
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattata--tgattttatcaaattattagctgtgtcg 90  Q
    ||||||||||||||||||||  ||||||| | |||| ||||| |||||||  ||||||| ||||||||| || |||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcg 11272648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 49107874 - 49107795
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    ||||||| |||||||||||| |||||| || |||| ||||||||||||| ||||||  ||||| |  ||||||||||||||    
T  49107874 ccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 13770744 - 13770637
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| | |||| ||||| |||||| | ||||| | |||||||||||||||||| ||| || |  ||||||||||||||| || ||| || | ||||||    
T  13770744 cgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccgagtccatatccg 13770645  T
Q  136 tgcttcat 143  Q
    || |||||    
T  13770644 tgtttcat 13770637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 19206104 - 19206025
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    ||||||| |||||| | | | |||||| ||||||| ||||||||||||| |||||| ||||| ||  |||||||||||||    
T  19206104 ccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 21864861 - 21864779
Alignment:
Q  36 cgacacctataatcacactaaattatatga--ttttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||||| | |||| ||||||||||||||||  |||| |||||||||||||||||||   ||||| |  |||||||||||||||    
T  21864861 cgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccg 21864779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 24105702 - 24105651
Alignment:
Q  65 attttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||| |||||||||||||||||||| |||||| |  |||||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 11722124 - 11722186
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggt 118  Q
    |||||| ||||||| ||||||| ||||| |||||| |||||| |  |||||||||||||||||    
T  11722124 aattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 15680863 - 15680801
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| |||||||||||| ||||||| |  ||||||||||| ||||| ||||||    
T  15680863 ccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtc 15680801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 19992055 - 19992001
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||||    
T  19992055 ccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 41020542 - 41020488
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| |||||||||||| |||||||   |||||||||| ||||||||||||||    
T  41020542 tataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtc 41020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 43027496 - 43027554
Alignment:
Q  57 attatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    ||||| ||||||| ||||||||||||||| |||| |||||| |  ||||||||||||||    
T  43027496 attatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 7438786 - 7438705
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||||  |||||||||| ||  ||||||| | |||| ||| | |||||| ||||||| ||||||||||| ||||||||    
T  7438786 gtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 15680886 - 15680857
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  15680886 tcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 18213038 - 18213147
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatc 133  Q
    ||||||| |||||| |||||||||||| ||||||| |  |||  ||||| ||||||| ||| || |  ||||||||||||| ||||  ||||| ||||||    
T  18213038 ccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgtgttcgtatc 18213137  T
Q  134 cgtgcttcat 143  Q
     |||||||||    
T  18213138 tgtgcttcat 18213147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 25822740 - 25822647
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||| ||||| ||||  ||||||| | |||| ||||| |||| |    |||| |||||||||||| ||||||| ||||||    
T  25822740 gacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 29812670 - 29812715
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    |||||||||| || |||||||||||||| ||||| |||||||||||    
T  29812670 cgacacctatgattacactaaattatatcattttctcaaattatta 29812715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 43250046 - 43249957
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    |||||| |||||| |||||  ||||| | ||||| ||||||||||| | |||||| |||||| |  |||||||| ||||||||| |||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtg 43249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 3721147 - 3721099
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| |||||| | |||||||||| ||||||| |||||||||||||    
T  3721147 ccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 23784412 - 23784352
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| ||| || ||||||||||| |||||||||||||||| ||| |  ||||||||||||    
T  23784412 gacacatatcataacactaaattagatgattttatcaaatttttaacgttgtcgacgtgtc 23784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 29787383 - 29787435
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    ||||| ||||| |||||| ||||||| ||||||||||||| |||||| |||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 42720897 - 42720957
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| |||||| ||| | |||||| ||||||| ||||||||||||| ||||| |||||||    
T  42720897 gacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtc 42720957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2572027 - 2572169
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||||||||| |||||||  ||||||| | |||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||     
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggt 2572126  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||||||| ||| |||||| ||||||| ||||||||    
T  2572127 atccgtgtcgtgtccagtgtccgtgtccgtatccatgcttcat 2572169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 22652064 - 22651922
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||| |||||||||||||||||||||||  ||||||| | |||| | | | |||||| ||||||| |||||||||||||||||||| |||||| |     
T  22652064 tcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 22651965  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     |||||||||||||||||| | |||| ||||||||| ||||||    
T  22651964 gtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcat 22651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 29510275 - 29510417
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||| |||||||||||||||||||| |  ||||||| | |||| | ||| |||| | ||||||| |||||||||||||||||||| |||||| |     
T  29510275 tcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagt 29510374  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     |||||||||||||||||| || |||  |||||||||||||||    
T  29510375 gtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcat 29510417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 24362173 - 24362315
Alignment:
Q  2 cggacacgtgtcgtgtccg-acaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||| ||||||||||||    ||||| |||||| ||||| |||||| ||||| | ||||||||||||| |||||| ||||||||     
T  24362173 cggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggt 24362272  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     || ||||||| ||||||| |||| | |||||| |||||||||    
T  24362273 gtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcat 24362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 15816107 - 15816196
Alignment:
Q  8 cgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||| ||||||  ||||||| |||||| |||||||||||| ||||||| |||||||||||| ||||||| ||||||    
T  15816107 cgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtc 15816196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 11927066 - 11927169
Alignment:
Q  10 tgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtc 109  Q
    ||||||||  |||||| ||||||  ||||||| |||||| ||||| |||||| ||||||||||||||||||| | |||||| ||| |  |||||||||||    
T  11927066 tgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtc 11927165  T
Q  110 gtgt 113  Q
    ||||    
T  11927166 gtgt 11927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 29447084 - 29447179
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    ||||| |||||||||||||||||||| ||  ||||||| | || | ||| | |||||| ||||||| |||||||||||| ||||||||||||||||    
T  29447084 gacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtcgg 29447179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 21465498 - 21465412
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||||||||||||||||||| |||||||  || |||| | |||| |||   |||||||||||||| |||||||||||||||||||    
T  21465498 ggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 27213603 - 27213518
Alignment:
Q  33 gtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggt 118  Q
    ||||||||| |||||| ||| | |||||| ||||||| | ||||||||||| |||||| |||||| | ||||||||||||||||||    
T  27213603 gtccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 926793 - 926901
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| ||||| ||  ||  |||||| ||||||||||||  |||| | |||||| |  |||||||||||||||||| |||||| |||||||    
T  926793 ccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatcc 926892  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  926893 gtgcttcat 926901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11944753 - 11944641
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||| || ||||||||  |||| | ||||||  ||||||| |||||| ||||| | |||| ||||||||||||||||||| | |||||| |||||  ||    
T  11944753 tcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagc 11944654  T
Q  101 atccgtgtcgtgt 113  Q
    |||||||||||||    
T  11944653 atccgtgtcgtgt 11944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8343404 - 8343289
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||| |||||    ||||  | ||||| | |||| |||||||||||| ||||||| |||||||||||||| |||||  |||||||     
T  8343404 tcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggt 8343305  T
Q  101 atccgtgtcgtgtccg 116  Q
     || ||||||||||||    
T  8343304 gtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22197713 - 22197855
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac-gagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    ||||||||||||| |||||||||| ||||| ||  | ||||| | |||| |||||||||||| ||| ||| |||||||||||||||||| | |||||  |    
T  22197713 tcggacacgtgtcatgtccgacac-gacactgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttag 22197811  T
Q  100 catccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
      || ||||||||||||||| ||||||    |||||||||||||    
T  22197812 tgtctgtgtcgtgtccggtgtccgtgtctagatccgtgcttcat 22197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 20873123 - 20873042
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| | |||| |||||||||||| ||||||| ||||||||||| || ||||| |||||| |  |||||||||||||||    
T  20873123 ccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34897138 - 34897077
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtc 34897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 39954292 - 39954348
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    |||||| |||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  39954292 tataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcgg 39954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 4673440 - 4673537
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||| ||||||||| ||||||||||| |||||||| |||||| |  || |||||||||||| || |||| | ||||| ||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtat-cgtgcttcat 4673537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 13844601 - 13844663
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||||| ||||||    
T  13844601 ccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 25172675 - 25172757
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||| ||||||||||||  |||||||  ||||||| |||||| ||| |||| ||| | ||||||||||||||||||| |||||    
T  25172675 acgtatcgtgtccgacattgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtc 25172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 4298891 - 4298972
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| | |||| ||| |||||||| ||||||| ||||||||||| |||||||| |||||  | ||| ||||||||||||    
T  4298891 ccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 24858032 - 24857955
Alignment:
Q  66 ttttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||||||||| |||||||| ||||||    ||||||||||||||||||  ||||| ||||||||| ||||||    
T  24858032 ttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttcat 24857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 25566910 - 25566841
Alignment:
Q  20 gacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||| ||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 13436953 - 13437053
Alignment:
Q  19 cgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggt 118  Q
    ||||||||||||||  ||||||| | | || ||  | |||||| ||||||| |||||||||||||||||||| |||||| |  ||| |||| ||||||||    
T  13436953 cgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggt 13437052  T
Q  119 g 119  Q
    |    
T  13437053 g 13437053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 27101566 - 27101507
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||  ||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  27101566 gacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 27101507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 8343026 - 8342971
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||||| |||||    
T  8343026 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg 8342971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 12606834 - 12606889
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||| ||||||    
T  12606834 ccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 14731763 - 14731712
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||| |||||| |||||||||||| ||||||| ||||||||||||| |||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 20785472 - 20785572
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgt 136  Q
    ||||| |||||| ||| |||||||| ||||||  ||||||||||||| |||| | | |      ||||||||||||| ||||| |||||| |||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattattagcggtgttggcat------atccgtgtcgtgtacggtgtccgtgtccgtatccgt 20785565  T
Q  137 gcttcat 143  Q
    |||||||    
T  20785566 gcttcat 20785572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 143
Target Start/End: Original strand, 37283824 - 37283923
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| ||||| |||||| ||||||| ||| ||||||||| ||| |  | |||| |  |||||||| |||| |||| || ||||||||||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttcat 37283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 39820482 - 39820399
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||||||| || |||||||||||||| ||||| |||||||||||   | |||  ||||||||  || |||||||||||||||    
T  39820482 cgacacctatgattacactaaattatatcattttctcaaattattatacgggtcagcgtgtcggtgtctgtgtcgtgtccggtg 39820399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 41838144 - 41838207
Alignment:
Q  51 cactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    |||| |||||| ||||||| | ||||||||||||||||||||||||| |  ||||| |||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 3025603 - 3025557
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||||||||||| ||||| |||||| ||||||| |||||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12570480 - 12570577
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    |||||||||||| ||||| |||||||| || |   |||||| |||||| ||||| |||||| || |||| | ||||||||||| ||||| |||||||||    
T  12570480 tcggacacgtgtagtgtctgacaccgatac-acatcgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaacgtgtcgg 12570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 12936515 - 12936569
Alignment:
Q  54 taaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgt 108  Q
    |||||||| ||||||||||||||||||| |  |||||||||||| | ||||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgt 12936569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 13845322 - 13845233
Alignment:
Q  2 cggacacgtgtc-gtgtccgacaccgacacgagtc-cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||| ||| ||||||||||||||||| || | |||||||||| || || ||||||||||| ||||| |||||||||||  |||||||    
T  13845322 cggacacgcgtcagtgtccgacaccgacac-agacacgacacctatgattactctaaattatatcattttctcaaattattatttgtgtcg 13845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 31236582 - 31236644
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| ||| | |||||| ||||||| ||||||||||||| |||||| ||||||    
T  31236582 ccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 43737876 - 43737926
Alignment:
Q  93 gtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||  |||||||||||||||||| ||||||  |||||||||||||||    
T  43737876 gtgtcggtgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 43737926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 4611614 - 4611533
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||||||||| ||||||||    |||| || |||||| ||||| |||||| | ||||| ||||||||||||| ||||||    
T  4611614 gtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5813669 - 5813640
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  5813669 tcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 24413632 - 24413673
Alignment:
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||||| |||| |||||| ||||||||||||||||    
T  24413632 tccgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcat 24413673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 25192352 - 25192433
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| |||||| | ||| |||||| | | ||| |||||||||||||||||||| |||||| |  ||||| |||||||||    
T  25192352 ccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccg 25192433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 26902149 - 26902214
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 69  Q
    |||||||||||||||||||||  | ||||  ||||||| |||||| ||||| |||||| |||||||    
T  26902149 gacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29447532 - 29447467
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgat 66  Q
    |||||||| ||||||||| |||||||||||||  || |||| |||||| ||||| |||||| ||||    
T  29447532 tcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 36934747 - 36934646
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgt 111  Q
    |||||||||| | ||| ||||  || |||| |||||| ||| | |||||| ||||||| || |||||||||| ||||||||||||  |  ||||||||||    
T  36934747 tcgtgtccgatatcgaaacgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgt 36934648  T
Q  112 gt 113  Q
    ||    
T  36934647 gt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 949285 - 949353
Alignment:
Q  51 cactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||| |||||| ||||||| ||||||||||| |||||||||||| || | ||  |||||||||| ||||    
T  949285 cacttaattatttgattttttcaaattattaactgtgtcgacgtatcagtatttgtgtcgtgtctggtg 949353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 34223001 - 34222953
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| |||||| ||||| |||||| ||||||||| |||||||||||    
T  34223001 ccgacacatataattacacttaattatgtgattttattaaattattagc 34222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 34451006 - 34451034
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacga 32  Q
    |||||||||||||||||||||||||||||    
T  34451006 gacacgtgtcgtgtccgacaccgacacga 34451034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16766785 - 16766643
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||| |||||||||||||||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| |||||| |     
T  16766785 tcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 16766686  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||| |||||||||||||| |||||| ||||||| ||||||||    
T  16766685 gtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcat 16766643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 7938170 - 7938062
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |  ||| |||||||||||||| |||||| |||||||    
T  7938170 ccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatcc 7938071  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  7938070 gtgcttcat 7938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 9107341 - 9107483
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||  || |||||||||||||||||||  ||||||| | |||| ||||| |||| | ||||||| |||||||||||||||||||| |||||  |     
T  9107341 tcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagt 9107440  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     |||||||||||||||||| ||||||  |||||||||||||||    
T  9107441 gtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcat 9107483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10294195 - 10294053
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||| |||||||||||||||| ||||||  ||||||| |||||| ||| | || |||  |||| | ||||||||||||| || ||| | |||| |     
T  10294195 tcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagt 10294096  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  10294095 atccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 10294053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 5970087 - 5970215
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgt 108  Q
    ||||||||||||||||||||||||  || |||  | |||| ||||| |||||| ||||||| ||||||||||| |||||||||||||      |||||||    
T  5970087 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtg------tccgtgt 5970180  T
Q  109 cgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    | ||||||||| |||||| |||||| |||||||||    
T  5970181 catgtccggtgtccgtgtccgtatctgtgcttcat 5970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8365490 - 8365613
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||| | |||| ||||  |||||| |||| || |||||||||||| ||||||| |||||| |     
T  8365490 tcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagt 8365589  T
Q  101 atccgtgtcgtgtccggtgcccgt 124  Q
     ||||||||||||| |||| ||||    
T  8365590 gtccgtgtcgtgtctggtgtccgt 8365613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 18367921 - 18367783
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||| |||||||||| |||||||||||||  ||||||| |||||| |||||  ||| | ||||||| | |||  ||||||||||||| |||||| |  ||    
T  18367921 gacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtc 18367823  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    | |||||||||||||| |||||| ||||||||||||||||    
T  18367822 catgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 18367783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 5000605 - 5000741
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgt 108  Q
    |||||||||| |||||||||| ||  | ||||  || ||| | ||| ||| || ||||||| || |||||||||| ||||||||||||| | ||||||||    
T  5000605 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgt 5000704  T
Q  109 cgtgtccggtgcccgtgtacgtatccgtgcttcatta 145  Q
    | ||||||||| ||||||| ||||| |||||||||||    
T  5000705 catgtccggtgtccgtgtatgtatctgtgcttcatta 5000741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 8776988 - 8777086
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||| | ||||||| |||||||||||| ||||||| |||||| |  ||||||||||||||| || |||||| ||||||||||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcat 8777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 10842606 - 10842524
Alignment:
Q  15 tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||||||| || |||||| ||| || |||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  10842606 tgtccgacaccgacacgtgttcgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 853880 - 853953
Alignment:
Q  51 cactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    |||| |||||| ||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  853880 cacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgt 853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 7977835 - 7977940
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||| |||||| | ||||| |||||||||||||||||||| |||||| | |||| |||||||||| ||| |||||| | |||||    
T  7977835 ccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatcc 7977934  T
Q  135 gtgctt 140  Q
    ||||||    
T  7977935 gtgctt 7977940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 9027241 - 9027124
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    |||||||  ||||||| |||||| ||||  |||||| ||||| | ||||||||||||| |||||| |||||| |  |||||||||||||||| | |||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtg 9027142  T
Q  126 tacgtatccgtgcttcat 143  Q
    | |||||| |||||||||    
T  9027141 tccgtatcggtgcttcat 9027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 10888982 - 10889087
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtg 137  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||  |||||||| |||  | || ||||||  | |||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgtgtctgcatccgtg 10889081  T
Q  138 cttcat 143  Q
    ||||||    
T  10889082 cttcat 10889087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 7086849 - 7086770
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    ||||||| |||||| |||||||||||| ||||||| ||||||||||||| ||| |||||||||||  || ||||||||||    
T  7086849 ccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 143
Target Start/End: Original strand, 8805586 - 8805685
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||||||||| ||||||| ||||||||||||| ||| |||||||||||  || |||||||||| ||||   ||||| |||||| ||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcat 8805685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 3209476 - 3209332
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacaccta------taatcacactaaattatatgattttat-caaattattagctgtgtcgacg 93  Q
    |||||| |||||||||| |||||| |||||||  |||||||| |      |||| |||||||||||| ||||||| | ||||||||||||||||||| ||    
T  3209476 tcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcg 3209377  T
Q  94 tgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgct 139  Q
    |||| |  || ||||||||||||||| ||||||  |||||||||||    
T  3209376 tgtctgtgtc-gtgtcgtgtccggtgtccgtgtttgtatccgtgct 3209332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 7625170 - 7625085
Alignment:
Q  41 cctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    |||||||| | |||||||||||| ||||| ||||||||||| | |||||||||||||||  || |||||||||||| || ||||||    
T  7625170 cctataattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgtccgtgt 7625085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 9195727 - 9195820
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    |||||| ||||||||| |||||| ||||||  ||||||| |||||| |||||||||||| | ||||| ||||||||||||  ||||||| ||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 16488564 - 16488657
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| |||||  ||| | ||||||| | |||  ||||||||||||| ||||||    
T  16488564 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 21395292 - 21395420
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgt 113  Q
    ||||||||||| |||||||  ||||||| | |||| |||||||||||| | ||||| ||||||||||||| |||| | ||||||||  ||| |||| | |    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatat 21395390  T
Q  114 ccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||| | ||||  |||||||||||||||    
T  21395391 ccggtgtctgtgtctgtatccgtgcttcat 21395420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 426519 - 426627
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||| | |||||| ||||||| ||||||||||| |||||||| |||||| |  |||||||||||||||||  ||||||  ||||||    
T  426519 ccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatcc 426618  T
Q  135 gtgcttcat 143  Q
     ||||||||    
T  426619 atgcttcat 426627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26562777 - 26562681
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| ||| ||||| ||||||||||||||   |||||| |||||| ||||| |||||| ||||||| ||||||| ||||| |||||| ||||||    
T  26562777 tcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 6389796 - 6389713
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||||||| || |||||||||||||| ||||| ||||||||||| | |||||| |||||  |  ||||||||||||||||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtg 6389713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 9629471 - 9629330
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac-gagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    |||||||| ||| ||||||||||| ||||| ||  ||||||| |||||| ||| | |||||| ||||||| |||||||||| || |||||| ||||||      
T  9629471 tcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaa 9629373  T
Q  100 catccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||||||||||||||| ||| | ||||| || ||||||||||||    
T  9629372 tatccgtgtcgtgtccagtgtctgtgta-gtctccgtgcttcat 9629330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10339096 - 10339239
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataa-tcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    ||||||| |||||||||||||||||||||||   | ||||| ||||| | ||||| |||||| ||||||| |||||||| | || |||||| |||||| |    
T  10339096 tcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcag 10339195  T
Q  100 catccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
      | | |||||||||| ||| || |||  |||||||||||||||    
T  10339196 tgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcat 10339239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 3398664 - 3398595
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgt 113  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||| |  ||||||||||||    
T  3398664 tataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 5732515 - 5732621
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||||||| ||| ||||||| ||||||||||| | |||||| |||||| |  ||| |||||||||| ||| ||||||  ||||||    
T  5732515 ccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgtatcc 5732614  T
Q  135 gtgcttc 141  Q
     ||||||    
T  5732615 atgcttc 5732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25038042 - 25038152
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||| |||||| |||| |  ||||||  | |||| |||||||||||| | ||||| ||||||||||| | ||||| ||||||| |     
T  25038042 tcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagt 25038141  T
Q  101 atccgtgtcgt 111  Q
    ||| |||||||    
T  25038142 atctgtgtcgt 25038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 34595188 - 34595098
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    ||||||| | |||| ||||| |||||| ||||||| |||||||||||| ||||||| ||||||    |||||||||||||||||| |||||    
T  34595188 ccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 8714060 - 8713971
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||||||||||||||  || |||  | |||| ||||| |||||| ||||||| | |||||||||| |||||||||||||||    
T  8714060 gtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtgtc 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 12696389 - 12696297
Alignment:
Q  24 ccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||||||||  | ||||| | |||| ||||| |||||| | ||||| |||||||||||||||||||| |||||| |  |||||||||||||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 17841604 - 17841656
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtc 17841656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 13851789 - 13851682
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| |||||| ||||| |||||  | ||||| ||||||||||||| ||||||||||||| |  |||||||||||| |  || |||||| || | |||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccgaacccg 13851690  T
Q  136 tgcttcat 143  Q
    ||||||||    
T  13851689 tgcttcat 13851682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 2153893 - 2153983
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    ||||||||||||| |||||||||||||| ||||| | ||||||||    |||||| ||||||||  |||||||| |||||| || ||||||    
T  2153893 cgacacctataattacactaaattatatcattttcttaaattattgttcgtgtcggcgtgtcggtgtccgtgtcatgtccgatgtccgtgt 2153983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9522979 - 9522898
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    ||||||||||||||  |||||||||||||| |  ||||||| | |||| ||||| |||||| ||||||| | ||||||||||    
T  9522979 tcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 4118308 - 4118444
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatcc 104  Q
    |||||| | ||||||||||| ||||| |  || |||| | |||| ||| | |||||| ||||||| ||||||||||| || | ||| |||||    || |    
T  4118308 acacgtattgtgtccgacactgacacaaaaccaacacttgtaattacatttaattatgtgattttttcaaattattaactatatcgtcgtgttaatatac 4118407  T
Q  105 gtgtcgtgtccggtgcccgtgtacgtatccgtgcttc 141  Q
    ||||||||||||||| |||||| |||||| |||||||    
T  4118408 gtgtcgtgtccggtgtccgtgtccgtatcagtgcttc 4118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 7723241 - 7723317
Alignment:
Q  21 acaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||  |||| || |||||| |  || |||||||||||||| ||||||||||||| ||||| |||||||    
T  7723241 acaccgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtc 7723317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 17341671 - 17341731
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| |||||| ||||| |||||| ||||||||||||||||||| | |||||| ||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtc 17341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 19040404 - 19040344
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||||| ||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 19040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 31385005 - 31384866
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcat 102  Q
    ||||||||||||||||| ||||  ||||||  | ||||| | |||| ||||| |||||| ||||||| |||||||||||| ||| || || || | | ||    
T  31385005 ggacacgtgtcgtgtccaacact-acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgtatcaacatgccagtat 31384907  T
Q  103 ccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| || ||| ||||| |||| | ||||| ||||||||||    
T  31384906 ccgtatcatgttcggtgtccgtatccgtattcgtgcttcat 31384866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 7996391 - 7996438
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  7996391 tataattacactgaattatatgattttctcaaattattagcagtgtcg 7996438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 8022410 - 8022363
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  8022410 tataattacactgaattatatgattttctcaaattattagcagtgtcg 8022363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 9025490 - 9025553
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||||  ||||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 9658925 - 9658854
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    |||||| ||||| |||||| ||||||| | ||||||||||| |||||| |||||| |  |||||||||||||    
T  9658925 tataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 17168442 - 17168514
Alignment:
Q  4 gacacgtgtc-gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    |||||||||| |||||||||||||||||||      ||||||| || |||||||||||||| ||||| |||||||||||    
T  17168442 gacacgtgtcagtgtccgacaccgacacga------cacctattattacactaaattatatcattttctcaaattatta 17168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 24832641 - 24832594
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||||| |||||| ||||||||||||| |||||| |||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattattagc 24832594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 25096467 - 25096372
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgctt 140  Q
    |||| |||||| ||||| ||||||| ||||||||||||  |||||| ||||||||  || |||| || |||| || |||||| ||||| |||||||    
T  25096467 taattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatgtccgtgtccgtatacgtgctt 25096372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 26178686 - 26178733
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    ||||||| ||| || |||||||||||| ||||||||||||||||||||    
T  26178686 ccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 30866147 - 30866238
Alignment:
Q  33 gtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||||| |||||| ||| | |||||| ||||||| ||||||||||||| |||| |  |||||||  || ||||| ||||||||| ||||    
T  30866147 gtccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgt 30866238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 81
Target Start/End: Original strand, 34447378 - 34447409
Alignment:
Q  50 acactaaattatatgattttatcaaattatta 81  Q
    ||||||||||||||||||||||||||||||||    
T  34447378 acactaaattatatgattttatcaaattatta 34447409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 7265598 - 7265660
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||| | ||||||    
T  7265598 ccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtc 7265660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 10770670 - 10770760
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||||||  ||||||| | |||| ||||| |||||| ||||||| |||||||||||| ||||| | |||||| |  ||| |||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 13689500 - 13689550
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgt 88  Q
    |||| |||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  13689500 acacgtataattacacgaaattgtatgattttatcaaattattagcggtgt 13689550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 20371115 - 20371177
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||||||| | | |||| ||||||| ||||||||||||| |||||| ||||||    
T  20371115 ccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtc 20371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 33001294 - 33001356
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| ||| | |||||| ||||||| ||||||||||||| |||||| ||||||    
T  33001294 ccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtc 33001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 1532286 - 1532230
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagc--tgtgtcgacgtgtc 97  Q
    |||||| ||||| |||||| | |||||||||||||||||||  ||||||||||||||    
T  1532286 tataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtc 1532230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7248446 - 7248365
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    |||||||| ||| |||||| |||||||||||| ||| |||| |||||| || || |||||| ||||||  ||| ||||||||    
T  7248446 tcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 7248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 16833362 - 16833281
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| | |||| ||||| || ||| ||||||| |||||||||||| ||||||| |||||| |  || ||||||||||||    
T  16833362 ccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28152175 - 28152146
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  28152175 tcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 29220251 - 29220202
Alignment:
Q  94 tgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||| |||| |||| |||||| ||||||| ||||||||    
T  29220251 tgtcggcatccgtgtcatgtcaggtgtccgtgttcgtatccctgcttcat 29220202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 34073337 - 34073442
Alignment:
Q  20 gacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||||||||||  ||||| | |||||| ||||| ||||||  |||||| |||||||||||||  ||| | | |||| |  |||||||||||||| |||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtg 34073436  T
Q  120 cccgtg 125  Q
     |||||    
T  34073437 tccgtg 34073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 8931592 - 8931668
Alignment:
Q  20 gacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    |||||||||||||   |||||| |||||| | ||| |||||| | ||||| ||||||| |||||||||||| |||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 9617510 - 9617442
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||||||||  ||||  ||||||| |||||| ||| | |||||| ||||||| |||||||||||    
T  9617510 cgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 21522837 - 21522696
Alignment:
Q  2 cggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggca 101  Q
    |||||||||||||||||||||||||||||||  ||||||  | |||| ||||| |||||| | ||||| | |||||||||||||||||| |||||| |      
T  21522837 cggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtg 21522738  T
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  21522737 tccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcat 21522696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 21533403 - 21533262
Alignment:
Q  2 cggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggca 101  Q
    |||||||||||||||||||||||||||||||  ||||||  | |||| ||||| |||||| | ||||| | |||||||||||||||||| |||||| |      
T  21533403 cggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtg 21533304  T
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  21533303 tccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcat 21533262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 19579780 - 19579647
Alignment:
Q  10 tgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtc 109  Q
    ||||||||||||||| |||||||  ||||||| | ||||  ||||||||||| ||||||| |||||||||||||||||||| ||| || |  |||||||     
T  19579780 tgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgtt 19579681  T
Q  110 gtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    || ||||||| | |||||||||||||||||||||    
T  19579680 gtatccggtgtcggtgtacgtatccgtgcttcat 19579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15382562 - 15382423
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat--caaattattagctgtgtcgacgtgtcg 98  Q
    ||||||| ||||||||||| ||||||||||     |||||| | |||| | ||| |||||||||||||| |  ||||||||||||||||||| ||||||     
T  15382562 tcggacatgtgtcgtgtccaacaccgacac-----cgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtca 15382468  T
Q  99 gcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
       |||||||||||||||||| |||||| ||||||||||||||||    
T  15382467 ttgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 15382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 6401583 - 6401444
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    ||||||||||||||||||||| |||||||  ||||||| |||||| |||||  ||| | ||||||| | |||   |||| ||||||| ||||||||  ||    
T  6401583 gacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtc 6401484  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||| |||||||| ||||||  |||||||||||||||    
T  6401483 cgtgtcgcgtccggtgtccgtgtctgtatccgtgcttcat 6401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 13287383 - 13287509
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtg 112  Q
    |||||||||||  |||||||  ||||||| | || | ||||| |||||| ||||||| ||||||||||| ||||||||||||||  |  |||||||||||    
T  13287383 cgtgtccgacag-gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtg 13287481  T
Q  113 tccggtgcccgtgtacgtatccgtgctt 140  Q
    ||||||| |||||| |||||||||||||    
T  13287482 tccggtgtccgtgtccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36642733 - 36642851
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| |||| | |||||||| ||| | | ||| ||||||||||| |||||||| |||||| |     
T  36642733 tcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagt 36642832  T
Q  101 atccgtgtcgtgtccggtg 119  Q
     ||||||||||||||||||    
T  36642833 gtccgtgtcgtgtccggtg 36642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21542118 - 21541984
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||||||||||||||  ||||||| | |||| ||||| |||||| | || || | |||||||||| ||||||| | ||||       
T  21542118 tcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaat 21542019  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
     || |||||||||| |||| |||||| ||||||||    
T  21542018 gtctgtgtcgtgtctggtgtccgtgtccgtatccg 21541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39698629 - 39698541
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||| || |||||||||||||||||||||||  | ||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  39698629 tcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 39698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 11686024 - 11685938
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||||  || ||| ||||||||||||| ||||||    
T  11686024 ggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7677793 - 7677704
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| ||| |||||| |||||||||||||  ||||||| | ||||  |||| |||||| ||||||| ||||||||||||||||||||    
T  7677793 tcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 21191061 - 21191158
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtat 132  Q
    ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| | |||| |  |||||||||||||||||| | |||| |||||    
T  21191061 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 21814346 - 21814253
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| |||||  ||| | ||||||| | |||  ||||||||||||| ||||||    
T  21814346 gacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 22013460 - 22013379
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    |||||| |||||||||||| | |||||  ||||||||||||||||||| |||||| |  |||||||||||||||||| ||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 22013379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 14674325 - 14674261
Alignment:
Q  33 gtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||| | |||| |||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  14674325 gtccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtc 14674261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 3966589 - 3966502
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||| ||| ||||||||||| |||||||  ||||||| |||||| ||||| |||| | ||||||| ||||||||||||| ||||||    
T  3966589 ggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 23221037 - 23220970
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcat 102  Q
    ||||||| ||| || |||||||||||| ||||||||||||||||||||| |||||||| |||| ||||    
T  23221037 ccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcagcat 23220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 37328826 - 37328940
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgt 111  Q
    |||||||||||||||||||||  ||||||| | |||| ||||| |||| | |||||||  ||||||||| |||||||||  || || |  ||||||||||    
T  37328826 tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgt 37328925  T
Q  112 gtccggtgcccgtgt 126  Q
    || ||||| ||||||    
T  37328926 gttcggtgtccgtgt 37328940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 23015995 - 23016104
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc-gac-gtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatc 133  Q
    ||||||||||||| ||||| |||||| ||||||| |||||| |||| |  |||| ||  |||||||  |||||||||||||||| | |||||| ||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcagagagtgtcggtgtccgtgtcgtgtccggagtccgtgtccgtatc 23016094  T
Q  134 cgtgcttcat 143  Q
    ||||||||||    
T  23016095 cgtgcttcat 23016104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 30098411 - 30098334
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||||||||||||||| ||| |||  |||||| ||||||| ||| | |||||| ||||||| |||||||||||    
T  30098411 gacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 41995546 - 41995416
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgt 111  Q
    |||||||||||||||| |||   ||||||| ||  || ||| | |||||| ||||||| || ||||||||| ||||||| |||||| |  || |||||||    
T  41995546 tcgtgtccgacaccgatacggcaccgacactta--attacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T
Q  112 gtccggtgcccgtgtacgtatccgtgcttcatt 144  Q
     ||| ||| |||||| |||||||||||||||||    
T  41995448 atccagtgtccgtgtccgtatccgtgcttcatt 41995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 19552563 - 19552639
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    ||||| |||||| ||||||| ||||||||||| |||||||| |||||| |  |||||||||||| ||||| ||||||    
T  19552563 acacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtggccgtgt 19552639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 39205931 - 39205872
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| |||||| ||||  |||||||||||||| ||||||||||||| |||||||||||||    
T  39205931 acacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtc 39205872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 16304444 - 16304534
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgctt 140  Q
    |||||||||||||||||||  |||||| || ||| |||||| |||||| | |||  |||||||||||||| | |||| ||||||| |||||    
T  16304444 acactaaattatatgatttattcaaataatcagcggtgtcggcgtgtcagtatctatgtcgtgtccggtgtcggtgtccgtatccctgctt 16304534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 28588679 - 28588741
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||| ||||| |||||| ||||||| ||||||||||| | |||||| ||||||    
T  28588679 ccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtc 28588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 6247676 - 6247592
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    ||||||| | |||| ||||| |||||| ||||||| |||||||||||| ||||||| |||||| |  | ||| ||||||||||||    
T  6247676 ccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtg 6247592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 12927700 - 12927660
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  12927700 tataattacactaaattatatgattttctcaaattattagc 12927660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 23012413 - 23012461
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| |||||| ||| |||||||||||||||| |||||||||||||    
T  23012413 ccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 24906306 - 24906414
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||| |||||| | ||||| ||||||||||| |||||| | |||||| |  | ||||||||||||||||| |||||  |||||     
T  24906306 ccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtgctcgtgtctgtatcg 24906405  T
Q  135 gtgcttcat 143  Q
    ||| |||||    
T  24906406 gtgtttcat 24906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 27144515 - 27144455
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| |||||| |||||||||||| ||||||  ||||||||||||| |||||| ||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtc 27144455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31084405 - 31084315
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||||||||| ||||      |||||| | |||| ||| | |||||| ||||||| |||||||||||||||||||| ||||||    
T  31084405 tcggacacgtgtcgtgtccgacac-gacat-----cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 16203800 - 16203855
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| |||||| ||||||||||||  |||||| ||||||||||||| ||||||    
T  16203800 ccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcg 16203855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19820425 - 19820488
Alignment:
Q  61 tatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||||| ||||||||||||| ||||||  ||||| |  |||||||||||||||||| ||||    
T  19820425 tatgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 6326312 - 6326410
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||||| | ||||| |||||||| ||||  ||||| |||||| |  |||||||||||||||||  |||||| | ||||| ||||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcat 6326410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 18592158 - 18592072
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||||| |||||||||||||||||||  ||| ||| |||||| ||| | |||||| | ||||| | ||| ||||||| ||||||    
T  18592158 gacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 20683368 - 20683330
Alignment:
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgctt 140  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  20683368 tccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 20683330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 25863257 - 25863175
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggt 118  Q
    |||||| |||||| ||||| |||||||| ||||| |||||||||||    |||||||||||||   || ||||||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattattatacatgtcgacgtgtcgatgtctgtgtcgtgtccggt 25863175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 30135336 - 30135286
Alignment:
Q  66 ttttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||| |||||||||||| ||||||| |||||||| ||| ||||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccg 30135286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 33178079 - 33178017
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| | |||| |||||||||||| ||||||| | |||||||||| ||||||| ||||||    
T  33178079 ccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtc 33178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 42469270 - 42469184
Alignment:
Q  40 acctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    |||||| || |||||||| ||| | ||||| ||||||||||| | |||||| ||||||   ||||||||||||| ||||| ||||||    
T  42469270 acctatgattacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgt 42469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43554604 - 43554529
Alignment:
Q  1 tcggacacgtgtcg-tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||| |||| ||||||||||||||||||      ||||||| || |||||||||||||| ||||| |||||||||||    
T  43554604 tcggacacgcgtcggtgtccgacaccgacacga------cacctatgattacactaaattatatcattttctcaaattatta 43554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 6770582 - 6770489
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||| ||||||| | |||||||||| ||||||   ||||| |  |||||||| ||| ||||| |||| | ||||||||||||||||    
T  6770582 acactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcat 6770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 17088361 - 17088284
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga-ttttatcaaattattagctgtgtc 89  Q
    |||| |||||||||||||||    ||||| | ||||||||||||||||| ||| |||| |||||||||||| ||||||    
T  17088361 cgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtc 17088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 25817576 - 25817495
Alignment:
Q  8 cgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||| |||| |||||||||| ||  | ||||| |||||||| ||| ||| |||||||||| | ||||||||||| |||||    
T  25817576 cgtgtcatgtctgacaccgacatgatactgacacatataatcatactgaatcatatgatttttttaaattattagcagtgtc 25817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26609441 - 26609360
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    |||||| |||||||||| | ||| ||||||||  |||||||  ||| |  |||||||| || ||||||||||||||||||||    
T  26609441 tcggacgcgtgtcgtgttcaacagcgacacgataccgacacaaatagttgcactaaatcatgtgattttatcaaattattag 26609360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32766914 - 32767003
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||||||||||| | ||||||||||||||  |  |||| |||||| ||| | |||| |  |||||| ||||||||||||| ||||||    
T  32766914 tcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 34879403 - 34879330
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtc 109  Q
    |||||| ||| || ||||| |||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||    
T  34879403 cgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtgtc 34879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 36838597 - 36838544
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgt 88  Q
    ||||||| |||||| |||||||||||| | ||||| ||||||||||||| ||||    
T  36838597 ccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 6035558 - 6035475
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| | |||||||||||  ||||||  |||||| ||||| |||||||| | ||| ||||||||||||| |||||| ||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtc 6035475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 10022678 - 10022642
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattat 79  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  10022678 tataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 12641758 - 12641666
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||| ||||| |||||| ||||||  | ||||| |  ||| | |||||||||| ||||||| | ||||||||| || ||||||||||||    
T  12641758 acacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtc 12641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 17177056 - 17177136
Alignment:
Q  63 tgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||| |||||||||||||||||| | ||| || |  |||| ||||| || |||| | |||| ||||||||||||||||    
T  17177056 tgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcat 17177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 21576751 - 21576803
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgt 88  Q
    |||||| | |||| ||||| |||||| ||||||| ||||||||||||||||||    
T  21576751 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 35017083 - 35017027
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    |||||| |||||||||||| ||||||| ||||||||||||  || ||| ||||||||    
T  35017083 tataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgtcgg 35017027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 39696005 - 39696049
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattatt 80  Q
    |||||||||| || |||||||||||||| ||||| ||||||||||    
T  39696005 cgacacctatgattacactaaattatatcattttctcaaattatt 39696049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 241682 - 241558
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||||||| ||||||  |||||||  ||||| |||||||||||| |||||||  ||||||||||||||||||| |||||| |     
T  241682 tcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagt 241583  T
Q  101 atccgtgtcgtgtccggtgcccgtg 125  Q
     |||||||||||||||||| |||||    
T  241582 gtccgtgtcgtgtccggtgtccgtg 241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 9629871 - 9629982
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||| ||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||     
T  9629871 tcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggt 9629970  T
Q  101 atccgtgtcgtg 112  Q
     ||| |||||||    
T  9629971 gtccatgtcgtg 9629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 398772 - 398878
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgt 136  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||||||| |||||| |||||| |  |||||||||||||||||| ||| || |||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgt 398871  T
Q  137 gcttcat 143  Q
    |||||||    
T  398872 gcttcat 398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1486686 - 1486822
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||||||||| |||||     |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||||  |||||| |     
T  1486686 tcggacacgtgtcgtgtccgacac-gacac-----cgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 1486779  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||| ||||||  |||||| ||||||| ||||||||    
T  1486780 atccgtgtcgtatccggtatccgtgtccgtatccatgcttcat 1486822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 40917837 - 40917714
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||| ||||||||||||  |||| || | |||| ||||| |||| |  |||||| |||||||||||||||||||| |||||| |     
T  40917837 tcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaattgt--gattttttcaaattattagctgtgtcggcgtgtcagt 40917740  T
Q  101 atccgtgtcgtgtccggtgcccgtgt 126  Q
    ||||||||||||||||||| ||||||    
T  40917739 atccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6612142 - 6612284
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||| | |||||||||||| ||||||||  ||||||| | |||| ||||| |||||| | ||||| ||||||||||| |||| ||| ||||||       
T  6612142 tcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcatt 6612241  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||||||||||||||||||  ||||| |||||| |||||||||    
T  6612242 gtccgtgtcgtgtccggtgttcgtgtccgtatctgtgcttcat 6612284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9828132 - 9828035
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    |||||||||||||||||| ||||| |||||||  ||||||| || ||| ||||| |||||| ||||||||||||||||||||  |||||| |||||||    
T  9828132 tcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtcg 9828035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 10577740 - 10577848
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||||  ||| | ||||||| | |||  ||||||||||||| ||||||||  |||||||||||||||||| |||||| |||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 10577839  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  10577840 gtgcttcat 10577848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 47989582 - 47989444
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||| ||||||||||||||||||||||||  ||||||| | |||| ||||| |||||| ||||||| | |||||||||  ||||||| |||||| |  ||    
T  47989582 gacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     |||||||||| |||  ||||||  |||||| ||||||||    
T  47989483 tgtgtcgtgtctggtatccgtgtctgtatccatgcttcat 47989444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 16297298 - 16297396
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||| | ||||||| ||| |||||| |||||||||||||||| | |||||| ||||||||| || || ||| ||||||||||||||||    
T  16297298 taattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttcat 16297396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 31694689 - 31694823
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga--ttttatcaaattattagctgtgtcgacgtgtcggcatccgt 106  Q
    |||| |||||||||||||||||||  ||||||| | |||| | ||| |||||| |||  |||| |||||||||||||| ||||||||| || |  ||  |    
T  31694689 gtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--t 31694786  T
Q  107 gtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||||| |||| | ||||||||||||||||    
T  31694787 gtcgtgtccggtgtccgtatccgtatccgtgcttcat 31694823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 44482310 - 44482240
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 79  Q
    ||||||||||||||||||||||||  ||||||| |||||| ||||| |||||| ||||||| |||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 46348388 - 46348450
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| | |||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  46348388 ccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtc 46348450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 38078666 - 38078769
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||| | |||||| ||||||| ||||||||||||||||||||||||||| |  |     |||||||||||| |||||| |||||||    
T  38078666 ccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtccgtatcc 38078760  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  38078761 gtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 38503374 - 38503266
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| ||||| || ||||||||||| ||||||||||||| ||||||  ||||  |  |||||||| ||||| ||| |||||| |||||||    
T  38503374 ccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatcc 38503275  T
Q  135 gtgcttcat 143  Q
    |||| ||||    
T  38503274 gtgcatcat 38503266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 48450590 - 48450673
Alignment:
Q  33 gtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||||| | |||| |||||||||||| | ||||| |||||||||||||||||| | |||||| |  |||||||||||||||    
T  48450590 gtccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5944371 - 5944254
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttat--caaattattagctgtgtcgacgtgtcg 98  Q
    ||||||| |||| ||||||| || ||||||||  ||||||| |||||| ||||| |||||| ||||||| |  |||||||||||||||| || ||||||     
T  5944371 tcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtca 5944272  T
Q  99 gcatccgtgtcgtgtccg 116  Q
    |  || ||||||||||||    
T  5944271 gtgtctgtgtcgtgtccg 5944254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 34371799 - 34371714
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||||||| ||||||||| ||||||  ||||||| |||||| ||||| |||||| ||||||| || |||||||||| |||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 36878515 - 36878453
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||| ||||| |||||| ||||||| ||||||||||||| |||||| ||||||    
T  36878515 ccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 36878453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 15323215 - 15323126
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    ||||| || ||| |||||||||||| ||||||| ||||||||||| |||| ||||| |||| |  ||| |||||||||||||| ||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgt 15323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 22881621 - 22881723
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||| ||||||| ||||      || ||||||||||||||| ||||||   |||||    
T  22881621 ccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtg------tcagtgtcgtgtccggtgtccgtgtctatatcc 22881714  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  22881715 gtgcttcat 22881723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 25361965 - 25361896
Alignment:
Q  10 tgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattat 79  Q
    |||||||||||||||||||||||  | ||||| |||||| ||||| |||||| ||||||| |||||||||    
T  25361965 tgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 32461438 - 32461530
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||||||||||||||||| |  || |||| | |||| ||| |||||||| ||||||| |||||||||||| |||| || ||||||    
T  32461438 gacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgtc 32461530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 5376483 - 5376587
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtg 112  Q
    ||||||||||| ||||||||  ||||||| | |||| ||||| |||||| | ||||| | ||||||||||| |||||| |||||  |  |||||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtg 5376582  T
Q  113 tccgg 117  Q
    |||||    
T  5376583 tccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 42359454 - 42359562
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||| |||| | ||||||| |||||||||||| ||||||  |||||| |  ||||||| |||| |||||  ||||| |||||||    
T  42359454 ccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatcc 42359553  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  42359554 gtgcttcat 42359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 5927355 - 5927434
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||   |||||| |  |||||||||||||||||| ||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgt 5927434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 9103677 - 9103586
Alignment:
Q  52 actaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||| ||||||| ||||||||||| |||||||| |||||| |  |||| ||| |||| ||||  ||||| | ||||||||||||||    
T  9103677 actaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtgtccatatccgtgcttcat 9103586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 14359537 - 14359607
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||| |||||| |  || ||||||||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 23531791 - 23531890
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttca 142  Q
    |||||| ||| | |||||| |||| || ||||||||||||| || | || |||||||  ||||| |||||||| ||| |||||| |||||||||||||||    
T  23531791 tataattacattgaattatgtgatattttcaaattattagcagtattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 1262917 - 1262855
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggt 118  Q
    |||||| ||||||| |||||||||||||||||||| |||||| |  | |||||||||||||||    
T  1262917 aattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggt 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 16927198 - 16927252
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| ||||| |||||||||||||| |||||||||||||| || |||||||||    
T  16927198 tataattacactgaattatatgattttttcaaattattagctatgccgacgtgtc 16927252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 22515892 - 22515946
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||||||||||    
T  22515892 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25934701 - 25934651
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacact 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| |||||    
T  25934701 gacacgtgtcgtgtccgacaccgacacgataccgacacatataattacact 25934651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 28273065 - 28273147
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||||||||||| ||| | ||  ||||||| | |||| ||||| |||||||||||||| |||||| ||||| ||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 34257923 - 34257977
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| |||||||||||| ||||||||| ||||||||| | |||||||||||||    
T  34257923 tataattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtc 34257977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 2896141 - 2896234
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||| ||||||| ||||||||||||| |||||| |||||| |  ||||||| ||||||| || |||||   |||||||| ||||||    
T  2896141 acactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactgtatccgttcttcat 2896234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 12443480 - 12443537
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtg 107  Q
    ||||| |||||| ||||||| |||||||||||||||||||| |||||| | |||||||    
T  12443480 acactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 20157346 - 20157439
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||||  ||||||| ||| || ||||| |||||| ||||||| ||| ||||||||| ||||||| ||||| |   |||||||||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtg 20157439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 113343 - 113291
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18556427 - 18556523
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| |||||||| ||| ||||||| |||||  || | || | |||| ||| |||||||| |||| || |||||||||||||||||||| ||||||    
T  18556427 tcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtc 18556523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 41877475 - 41877583
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| |||||||||||| | ||||| ||||||||||||| |||||| |||  | |  || |||||||||| |||  || ||| |||||||    
T  41877475 ccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccgtatcc 41877574  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  41877575 gtgcttcat 41877583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 1864885 - 1864940
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| |||||| ||||| |||||| ||||||| ||||||||||| ||||||||    
T  1864885 ccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcg 1864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17831504 - 17831598
Alignment:
Q  1 tcggacacgtgtcg-tgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||| ||||| |||||||||| |||||||   |||||| ||| || ||||| ||| || ||||||| ||||||||||||| |||||| ||||||    
T  17831504 tcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtc 17831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 31015099 - 31015044
Alignment:
Q  33 gtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgt 88  Q
    ||||||||| | |||| ||||| |||||| ||||||| ||||||||||||||||||    
T  31015099 gtccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 21530743 - 21530681
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||| | |||||| ||||||    
T  21530743 ccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 25272536 - 25272482
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||| |||||| |||||||||||| ||||||| ||||||| ||| |||||||    
T  25272536 ccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtc 25272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 52903303 - 52903257
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||| |||||| ||||| |||||||||||||||| |||||||||    
T  52903303 ccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 21366040 - 21366133
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||| | ||||| | ||||||||||||||| || ||||||||  | |||||||||| |||||  | ||| ||||| ||||||||||    
T  21366040 acactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcat 21366133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37598908 - 37598879
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  37598908 tcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 39130772 - 39130861
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||| |||||| |||||||||||||| ||||| | |||||||||   |||||  ||||||   |||| |||||||||||||| ||||    
T  39130772 ccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgt 39130861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 48040503 - 48040556
Alignment:
Q  71 tcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||||||| |||||||| |||||| |  |||||||||||||||||| ||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 48040556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 2851059 - 2851000
Alignment:
Q  51 cactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgt 111  Q
    |||| |||||| | ||||||||||||||||||| |||| |||||||| | |||||||||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtcgt 2851000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16164286 - 16164366
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    |||||||||||| | |||| ||||| ||||||    ||||| |||||| ||| |||||||| ||||||| |||||||||||    
T  16164286 tcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 23804480 - 23804436
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||| |||||| ||| |||||||||| |||||||||||||||||    
T  23804480 gacacatataattacattaaattatataattttatcaaattatta 23804436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 34298482 - 34298406
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||| ||||| |||||| ||||||| ||||||||||||  ||||||  ||||| |  ||||||||||||| ||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtg 34298406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 41597519 - 41597583
Alignment:
Q  79 ttagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||| | ||||||||  ||||||||||||  |||| |||| | ||||||||||||||||    
T  41597519 ttagctgtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcat 41597583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 15796267 - 15796407
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcat 102  Q
    |||||||||| |||||||||||| ||||||  ||||||  | |||| ||||| |||||||||||||| ||||||||||| |||||||| ||||||    |    
T  15796267 ggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgt 15796366  T
Q  103 ccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||||||||| |||||| | ||||||||||||||    
T  15796367 ccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcat 15796407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 750590 - 750732
Alignment:
Q  2 cggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg-gc 100  Q
    |||||||||||||||||||| ||||||||||  ||||||| | ||||  ||   |||||| |||| || |||||||||||| ||||||| ||||||  |     
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagt 750689  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     |||||||||||||||||| |||||| ||||||||||||||||    
T  750690 gtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 3164045 - 3164138
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||| |    |||||||||||||||||| ||||||  |||||||||||||||    
T  3164045 acactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 3164138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 10335306 - 10335399
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||| ||| ||| ||| |||||||||||| ||||||| |||||| |  |||||||||||||||||| |||||| ||||||||||||||||    
T  10335306 acactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcat 10335399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4987262 - 4987358
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||||||||| |||||||||||   || |||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  4987262 tcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 4987358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 14209197 - 14209104
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    ||||||||||||||||||||||||||||  | ||||| | |||| ||||| |||||| ||||||| | |||||||||| ||||||| |||||||    
T  14209197 acacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtcg 14209104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14216976 - 14216867
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatcc 104  Q
    ||||||||||||||||||||  ||||||  | ||||| | |||| ||||| ||||||||||| || | |||||||||| |||||||||||||| |  |||    
T  14216976 acacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc 14216877  T
Q  105 gtgtcgtgtc 114  Q
    ||||||||||    
T  14216876 gtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14223105 - 14222996
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatcc 104  Q
    ||||||||||||||||||||  ||||||  | ||||| | |||| ||||| ||||||||||| || | |||||||||| |||||||||||||| |  |||    
T  14223105 acacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc 14223006  T
Q  105 gtgtcgtgtc 114  Q
    ||||||||||    
T  14223005 gtgtcgtgtc 14222996  T

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Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8039806 - 8039902
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| || || ||||||||||||||||||  ||||||| |||||| ||||| |||||||| ||||| ||||||||||||| |||| | ||||||    
T  8039806 tcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtc 8039902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 25064992 - 25064879
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||||||||||||||||||||| ||||||  || ||||  ||||| |||||||||||| ||||||| |||||| |||||| |||||| ||||||    ||    
T  25064992 gacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtc 25064895  T
Q  104 cgtgtcgtgtccggtg 119  Q
     |||||||||||||||    
T  25064894 tgtgtcgtgtccggtg 25064879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 41961621 - 41961745
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||| ||||||||||  ||||||| | |||| ||||  ||| || |||| || |||||||||||| |||| || |||||| |     
T  41961621 tcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagt 41961720  T
Q  101 atccgtgtcgtgtccggtgcccgtg 125  Q
     || ||||||||||||||| |||||    
T  41961721 gtctgtgtcgtgtccggtgtccgtg 41961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 7171534 - 7171448
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||| ||||||||  |||||||||| | |||| | ||||||||||||||||||| | |||| ||||||||||||||||    
T  7171534 aattatatgatttt-tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccgtatccgtgcttcat 7171448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 8383311 - 8383220
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    ||||||| |||||| ||||| |||||||||||||| ||||||||||||| |||||| ||||||    |||||||||||||| ||| ||||||    
T  8383311 ccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgt 8383220  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 23870571 - 23870626
Alignment:
Q  42 ctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  23870571 ctataatcacactgaattatatgattttttcaaattattagcggtgtcgacgtgtc 23870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14832187 - 14832081
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||| ||||||||||  | ||||| | |||| ||| | | |||| ||||||| |||||||||||||||| ||| |||||| |     
T  14832187 tcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgt 14832088  T
Q  101 atccgtg 107  Q
    |||||||    
T  14832087 atccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 28918055 - 28917965
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    ||||||| | |||| ||||| |||||| ||||||| |||||||||||||| ||||| |||||| |  |||||||||||||||||| |||||    
T  28918055 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 16192729 - 16192857
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgt 108  Q
    |||||||||| |||||||||||||   | |||| |||||| ||||| |||||| | ||||| ||||||||||| | ||||||  ||||||||||| | ||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtcggcatctgagt 16192828  T
Q  109 cgtgtccggtgcccgtgtacgtatccgtg 137  Q
    | |||||| || || ||| ||||||||||    
T  16192829 catgtccgatgtccttgtccgtatccgtg 16192857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 21479198 - 21479070
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||| ||||||||||||||||||||||     ||||||   |||| ||||| |||| | ||||||| |||||||||||||||||||| ||||      ||    
T  21479198 gacatgtgtcgtgtccgacaccgacac-----cgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtg------tc 21479110  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||||||||||||||| |||||| ||||||| ||||||||    
T  21479109 agtgtcgtgtccggtgtccgtgtccgtatccatgcttcat 21479070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 1509614 - 1509539
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||| |||||||| ||||  ||||||| | |||| |||||||||||| ||||||| |||||||||||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 11666029 - 11665950
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||||||||||||||  ||| | ||||||  ||||||| |||||| |||||||||| | |||||||||||||||||||||    
T  11666029 gacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 24205047 - 24205154
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| |||||| |||||  ||||| | ||||| ||||||||||| | |||||| |||||| |  |||||||||||||||||| ||||||  || ||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24205146  T
Q  136 tgcttcat 143  Q
    ||||||||    
T  24205147 tgcttcat 24205154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 35994744 - 35994850
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| | ||||    ||| |||||||||||||| || ||| ||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccg 35994842  T
Q  136 tgcttcat 143  Q
    ||||||||    
T  35994843 tgcttcat 35994850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 10268501 - 10268599
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||| |||||| |  ||| ||||||   || || |||||| ||||||||||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgtatccgtgcttcat 10268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 17005593 - 17005671
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    |||||||||  |||| |||||| |||| |  ||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  17005593 gacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 16000036 - 16000129
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||| | ||||| | |||||||||| ||||||| |||||| |  || ||||||||| ||||| |||||| ||||||||||||||||    
T  16000036 acactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcat 16000129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 34307763 - 34307893
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgt 106  Q
    ||||||||||||||||||||||||||      ||| |||||| ||||| || ||| ||||||| ||||||||||||| |||||  |||||  |  || ||    
T  34307763 acgtgtcgtgtccgacaccgacacga------cacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgt 34307856  T
Q  107 gtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||| |||||||||  ||||| ||||||| ||||||||    
T  34307857 gtcatgtccggtgttcgtgtccgtatccatgcttcat 34307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 34910397 - 34910308
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    ||||| ||||||||||||| ||||  ||||| | | |||| ||||| |||||| ||||||| |||||||||||| ||||||| |||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcg 34910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 55401129 - 55401040
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||| ||||||| ||| || |  |||||||||| ||||||| ||||    
T  55401129 ccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 14747606 - 14747513
Alignment:
Q  45 taatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| |||||||||||| ||||||| | ||||||||||||||||||| ||||      || ||||||||||||||| |||| | ||||||||||||||||    
T  14747606 taattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtg------tcagtgtcgtgtccggtgtccgtatccgtatccgtgcttcat 14747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 38731272 - 38731164
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||  ||||| |||||| ||||||| | ||||||||||| || ||||| ||||||  | | ||||||||||| || |||||| || ||||    
T  38731272 ccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtccgcatcc 38731173  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  38731172 gtgcttcat 38731164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 14829766 - 14829660
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgt 111  Q
    |||||||| ||||||||||||  ||||||| | |||| ||  | |||||| ||||||| |||||||||||||||||||| |||||| |  || ||||| |    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcat 14829668  T
Q  112 gtccggtg 119  Q
    ||||||||    
T  14829667 gtccggtg 14829660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 26492220 - 26492291
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||| ||||| |||| ||||||||| |||||||||||||| ||||| |||||| |  |||||||||||||||    
T  26492220 taattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 4990950 - 4991080
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtg 112  Q
    |||||| || ||| ||||||  ||||||| | |||| ||||| |||||| | ||||| ||||| ||||||| ||||||  ||||| |  |||||||||||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtg 4991049  T
Q  113 tccggtgcccgtgtacgtatccgtgcttcat 143  Q
    | ||||| |||||| ||||| |||| |||||    
T  4991050 ttcggtgtccgtgtccgtatacgtgtttcat 4991080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 14028011 - 14027961
Alignment:
Q  93 gtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||  |||||||||||||||||| |||||| ||||||||||||||||    
T  14028011 gtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 14027961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 14223873 - 14223939
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||||||||||  |||| ||||||||||| |||||||| ||||||||  || ||||||||||||    
T  14223873 acactaaattatatcgttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtccg 14223939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 15864886 - 15864824
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    |||||||||| || |||||||||||||| ||||| ||||||||||| | |||||| |||||||    
T  15864886 cgacacctatgattacactaaattatatcattttttcaaattattatccgtgtcggcgtgtcg 15864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 16789098 - 16789020
Alignment:
Q  3 ggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||| ||||| |||||||||| |||||||  || |||| |||||| ||||| |||||||||||||| | |||||||||    
T  16789098 ggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 10318112 - 10318153
Alignment:
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  10318112 tccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcat 10318153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 26508164 - 26508083
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||  |||||| | ||| || |||||||||    
T  26508164 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28812603 - 28812506
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    ||||||| || ||||||| |||||| ||||||  ||||||| | |||  ||||| |||||| ||||||  |||||||||||| ||||||| |||||||    
T  28812603 tcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtcg 28812506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 55213050 - 55212962
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||||||| ||| ||||||||||||| |  ||||||| | ||||  ||||||||||| ||||||| | ||||||||| ||||||||    
T  55213050 tcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcg 55212962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 11313808 - 11313860
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||| |||||| |||||||||||| ||||||| ||||||||||||| ||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34185094 - 34185190
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||| |||| |||||||||  |||||||  ||||||| | |||| ||||| |||| | ||||||| | ||||||||||| |||||| ||||||    
T  34185094 tcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtc 34185190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 7928504 - 7928449
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| |||||| ||||| |||||| ||||||| ||||||||||||| ||||||    
T  7928504 ccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 29508497 - 29508451
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    |||||| |||||| ||||| |||||||||||||| ||||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 49505161 - 49505207
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||| |||||| |||||||||||| ||||||| |||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10955029 - 10955000
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  10955029 tcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 14979220 - 14979175
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtg 95  Q
    ||||| |||||| ||||||| |||||||||||||||||||| ||||    
T  14979220 acactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 15544726 - 15544685
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| ||||||||||||||||||||| ||||| |||||||    
T  15544726 aattatgtgattttatcaaattattagcggtgtcaacgtgtc 15544685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 25326479 - 25326402
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgt 113  Q
    ||||| ||||||| |||||||||||||| ||||| | ||||||||| |||||| |  || |||||||| || ||||||    
T  25326479 cgacatctataattacactaaattatattatttttttaaattattatctgtgttggtgtatcggcatctgtatcgtgt 25326402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||| |||||||||||| ||||||| ||||||||||||| |||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 28678378 - 28678309
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||| |||||| ||||||  ||||||| || ||| | |||||||||| ||||||||| |||||||||||    
T  28678378 gtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 32804547 - 32804600
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||| |||||| |||||||||||| ||||||| ||||||||||| | ||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 40052365 - 40052324
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| ||||||| |||||||||||||||||||| ||||||    
T  40052365 aattatgtgattttttcaaattattagctgtgtcggcgtgtc 40052324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 55401152 - 55401123
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  55401152 tcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 14840304 - 14840376
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    |||||| ||||| |||||| ||||||| | |||||||||   |||| | |||||||| |||||||||||||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 21256991 - 21257055
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    ||||||| | |||| | ||| |||||| ||||||| |||||||||||||||||||  ||||||||    
T  21256991 ccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtcgg 21257055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 25093556 - 25093448
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| ||||| |||| | ||||||| |||||| |||| | |||||| |||||  |  || ||||||||||||||| | ||||  ||||||    
T  25093556 ccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgtttgtatcc 25093457  T
Q  135 gtgcttcat 143  Q
    || ||||||    
T  25093456 gtacttcat 25093448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 8852 - 8744
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||||||| |||||||||| |||||||||||||||||||| |||||| |  |||||||||||||||||| |||||| |||||||    
T  8852 ccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 8753  T
Q  135 gtgcttcat 143  Q
     ||||||||    
T  8752 atgcttcat 8744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8875 - 8846
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  8875 tcggacacgtgtcgtgtccgacaccgacac 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 24343560 - 24343453
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    ||||||||||||| ||||| |||||| | ||||| ||||||||||| | |||||| ||||||||| |||||||||||||||||| ||||||  || ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24343461  T
Q  136 tgcttcat 143  Q
    ||||||||    
T  24343460 tgcttcat 24343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 30982849 - 30982990
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||||||| |||||||||||||  ||||||| |||||| ||||| || ||| ||||||| |||||| |||||| ||   | |||||| |     
T  30982849 tcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgt 30982945  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcatta 145  Q
     |||||||||| ||||||| || ||| ||||||||||||||||||    
T  30982946 gtccgtgtcgtatccggtgtccatgttcgtatccgtgcttcatta 30982990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30838298 - 30838205
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgt 94  Q
    |||||||||||||| ||||||||| |||||||  |||| || |||||| |||||||||||||| ||||||||||||||||||| || |||||||    
T  30838298 tcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgt 30838205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19482756 - 19482614
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||| | ||||||||||  || |||| | |||| ||||  |||||| |||| || |||||||||||| ||||||| |||||| |     
T  19482756 tcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagt 19482657  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     || |||||||||| |||| | |||| ||||||||||||||||    
T  19482656 gtctgtgtcgtgtctggtgtctgtgttcgtatccgtgcttcat 19482614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 23292991 - 23293099
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| | ||| |||||| ||||||| |||||||||||||||||||| ||||||    |||||||||||||||||| |||||| ||||||     
T  23292991 ccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatct 23293090  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  23293091 gtgcttcat 23293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 27706148 - 27706286
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||| |||||||||||||||||   ||||||  |  |||| | |||| |||||||||||| ||||||| | |||||||||  |||||||||||||| |     
T  27706148 tcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagt 27706247  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgct 139  Q
     ||| ||||||||| |||| |||||| ||||||||||||    
T  27706248 gtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 35157990 - 35158091
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||||||||||| |||||||  ||||||||||| || |||| |||||| |  ||||||| |||||||||| |||||| |||||||    
T  35157990 ccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatcc 35158089  T
Q  135 gt 136  Q
    ||    
T  35158090 gt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 5414146 - 5414261
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    ||||||||||||||||||||| |||||||  |||| || |||||| |||||  ||| | ||||||| | |||  ||||||||||||| |||||| |  ||    
T  5414146 gacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtc 5414245  T
Q  104 cgtgtcgtgtccggtg 119  Q
    ||||||||||||||||    
T  5414246 cgtgtcgtgtccggtg 5414261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 24613675 - 24613770
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcgg 99  Q
    ||||||||||||||| |||||||||| ||  ||||||| | || | ||| | |||||| ||||||| |||||||||||| ||||||||||||||||    
T  24613675 gacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtcgg 24613770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 20633508 - 20633431
Alignment:
Q  66 ttttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||||||||||| ||||||||||||| |  ||||| ||||||| |||| |||||| ||||||||||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcat 20633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22234861 - 22234958
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga-ttttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||| |||||||||||||  ||||||| || ||| ||||| |||||| ||| |||| ||||||| ||||| |||||| ||||||    
T  22234861 tcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtc 22234958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 7012141 - 7012041
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgt 113  Q
    ||||||||||||||||| |  |||| |||||| |||||||| |||||| | ||||| ||||||||||| | |||||| ||||||||  |||||||| |||    
T  7012141 gtgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcctgt 7012042  T
Q  114 c 114  Q
    |    
T  7012041 c 7012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 904010 - 903868
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||| |||||||||| ||||||| ||||  | || || |||||| ||||| |||||| ||||||| ||||||||||| | ||| ||  ||||| |     
T  904010 tcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagt 903911  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     ||||| |  |||| || |||||||| ||||||||||||||||    
T  903910 gtccgttttatgtctggcgcccgtgtccgtatccgtgcttcat 903868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 40742667 - 40742599
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    |||||| |||||||||||||   |||||| |||||| |||||| ||||||||||||| |||||||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 20521875 - 20521954
Alignment:
Q  56 aattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| ||||||||||||||||||| | || ||| |||||| |  ||||||||||||| |||| || ||||||||||||    
T  20521875 aattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtccatgtacgtatccg 20521954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 848036 - 847898
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    ||||||| |||||||||||||| ||| ||  ||||||| | |||| | | | |||||| | ||||| ||||||||||||| |  ||| |||||| |  ||    
T  848036 gacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtc 847937  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttca 142  Q
     ||||||||||||| | || ||| |||||||||||||||    
T  847936 tgtgtcgtgtccggggtccatgtccgtatccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 51701340 - 51701258
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||||| ||||||||||||||  |  |||| | |||| ||||| |||||| | ||||| |||||||||||||||||||    
T  51701340 acgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 36635375 - 36635270
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtg 137  Q
    |||| |||||| ||||| |||||| ||||||| ||||||||||||  |||| | |||||| |  |||| ||||||||||||| | |||| | ||||| ||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatg 36635276  T
Q  138 cttcat 143  Q
    ||||||    
T  36635275 cttcat 36635270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 46083965 - 46084050
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||||||||||||||| || |||||||  ||||||| |||||| |||||| ||||| ||||||  | |||  ||||||||||||    
T  46083965 gacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtc 46084050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 5832716 - 5832760
Alignment:
Q  52 actaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||    
T  5832716 actaaatcatatgattttctcaaattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 12895279 - 12895387
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||| ||||||| ||||||| |||||||||||  ||||||| ||||||    | |||||||| ||||||| |||| | ||||||     
T  12895279 ccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccgtatct 12895378  T
Q  135 gtgcttcat 143  Q
    ||| |||||    
T  12895379 gtgtttcat 12895387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14126093 - 14126177
Alignment:
Q  13 cgtgtccgacaccgacacgagtcc-gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    |||||||||||| |||||||| |  ||||| |||||| ||||| |||||| ||| ||||||||||||||| | |||||| |||||    
T  14126093 cgtgtccgacacggacacgagacatgacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgt 14126177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 999354 - 999401
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||||| |||||| |||||||||||||||||||  |||||||||||||    
T  999354 cgacacatataattacactaaattatatgatttactcaaattattagc 999401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 2361980 - 2362035
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| | |||| |||||||||||| | ||||| ||||||||||||||||||||    
T  2361980 ccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 11651155 - 11651218
Alignment:
Q  51 cactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    |||| |||||| ||||||| | ||||||||||||||||||||||||| |  ||||| |||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 28084589 - 28084486
Alignment:
Q  22 caccgacacgagtccgacacctataatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgc 120  Q
    |||||||||||  | ||||| | |||| ||| | |||||| ||||||| | |||||| |||||||||||| |||||| || || |||||||||||||||     
T  28084589 caccgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgt 28084490  T
Q  121 ccgt 124  Q
    ||||    
T  28084489 ccgt 28084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 21945557 - 21945467
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtg 125  Q
    ||||||| | |||| ||||| |||||| | ||||| |||||||||||||||||||| | |||| |  || ||||| ||||||||| |||||    
T  21945557 ccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 35952630 - 35952684
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| ||| | |||||||||||||||||||||||||||| ||| || ||||||    
T  35952630 tataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 44081584 - 44081690
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgt 136  Q
    ||||| |||||| ||| |||||||||||||||| ||||||||||| |  | |||  ||||| |  ||| ||||||||||| ||  ||||| |||||| ||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggt 44081683  T
Q  137 gcttcat 143  Q
    |||||||    
T  44081684 gcttcat 44081690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 54580028 - 54580082
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||| |||||| ||||| |||||| ||||||| |||||||||||| ||||||    
T  54580028 ccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 34306786 - 34306815
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  34306786 tcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 38847027 - 38847072
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  38847027 taattacactgaataatatgattttttcaaattattagctgtgtcg 38847072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 4383447 - 4383360
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||  |||||||||||||  | ||||  | |||| ||||| |||||| ||||||| |||||||||||| ||| ||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtc 4383360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 6273991 - 6273935
Alignment:
Q  42 ctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcg 98  Q
    ||||||| |||||||||||||| ||||| ||||||||||  |||||||  |||||||    
T  6273991 ctataattacactaaattatatcattttctcaaattattgtctgtgtcagcgtgtcg 6273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 13134532 - 13134444
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtg 95  Q
    |||||| |||| ||||  ||||||||   |||||| |||||| |||||||||||| ||||||| | ||||||| ||| |||||| ||||    
T  13134532 acgtgttgtgttcgacgtcgacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 16303271 - 16303351
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtcc 115  Q
    ||||||| | |||| |||||||||||||| ||||| ||||| ||||| || ||||| |||||| |  ||||| ||||||||    
T  16303271 ccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19312423 - 19312355
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 69  Q
    ||||||||||||||| ||||||| ||||||||  |||| || |||||| ||||| ||| || |||||||    
T  19312423 tcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 33950190 - 33950082
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| ||| || ||| |||||||| ||||||| ||||||||||||| | || || ||||| |  | |||||  |||| |||| |||||| |||| ||    
T  33950190 ccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtccgtgttcgtaccc 33950091  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  33950090 gtgcttcat 33950082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 38148702 - 38148786
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcga 91  Q
    ||||||||||||| ||||| ||||||   |||||  || ||| ||||| |||||| ||||||| ||||| ||||||| |||||||    
T  38148702 acgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtcga 38148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 50280921 - 50280873
Alignment:
Q  49 cacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||| |||||| ||| ||| |||||||||||||||||||| ||||||    
T  50280921 cacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtc 50280873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 54580006 - 54580034
Alignment:
Q  2 cggacacgtgtcgtgtccgacaccgacac 30  Q
    |||||||||||||||||||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacac 54580034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 20539679 - 20539768
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||| ||| ||||    
T  20539679 ccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgt 20539768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 34784956 - 34785095
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||| ||||||||||||| ||||||||||  ||||||| |||||| |||||||||||| ||||||| | |||  ||||| |||||||  ||||| |  ||    
T  34784956 gacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtc 34785055  T
Q  104 cgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||||||||| || | |||||| |||||| |||||||||    
T  34785056 cgtgtcgtgtctggggtccgtgtccgtatctgtgcttcat 34785095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 26769599 - 26769463
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||||||||||| ||||||| ||  ||||||| | |||| |||| | || || |||| || |||||||||||| ||||||| ||||         
T  26769599 tcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtg----- 26769505  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
     || ||||||||||||||| |||||| ||||||||||||||||    
T  26769504 -tctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 26769463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 21616813 - 21616707
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtg 137  Q
    |||| |||||| ||||| |||||| ||||||| ||||||||||||| |||||| |||||| |  |||||||||||||  ||| | |||| ||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtg 21616714  T
Q  138 cttcatt 144  Q
    |||||||    
T  21616713 cttcatt 21616707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35056956 - 35056883
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaa 74  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||| ||||| ||||||||| |||| ||||    
T  35056956 tcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 23354658 - 23354748
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgt 126  Q
    |||||||||| || |||||||||||||| ||||| ||||||||||| |||||||  | ||||||  |||||||| ||||||||| ||||||    
T  23354658 cgacacctatgattacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtccgtgt 23354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15657952 - 15657827
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||||||| |||||||| | ||||||  ||||||  | |||| ||||| |||||| |||||||  ||||||||||| || |||| |||||  |     
T  15657952 tcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagt 15657853  T
Q  101 atccgtgtcgtgtccggtgcccgtgt 126  Q
     |||||||||||||||||| ||||||    
T  15657852 gtccgtgtcgtgtccggtgaccgtgt 15657827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 30717505 - 30717590
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||||||||||||||| ||||||||   |||||| | |||| ||||| |||||| ||||||| |||||||||||||| |||||    
T  30717505 acacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcg 30717590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44860408 - 44860320
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||||| |||||||||| ||||| ||||||  ||||||| |||||| ||||| ||||||  |||||| ||||||||||||| |||||    
T  44860408 tcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 28412395 - 28412296
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| ||||| |||||| ||||||||||||||||||| | |||| |||||||  |  ||||||||||||| |||| |||||| | ||| ||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcat 28412296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27286263 - 27286345
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| ||||||||||||||| ||||| ||    |||||||||||| ||||| |||||| |||| ||||||||||||||||    
T  27286263 tcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattagc 27286345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 4207940 - 4207864
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| ||||||||||||  | |||| ||||||||||||    
T  4207940 acacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaattatgcgcttttttcaaattattag 4207864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 12940950 - 12941019
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    |||| ||||| |||||||||||||| |||||||||||| |||||| ||||||| |  |||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 36756315 - 36756460
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||| |||| |||| ||||||  ||||||  ||||||| |||||| ||||| |||||| | ||||  |||||||||||| |||||||||||||| |     
T  36756315 tcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagt 36756414  T
Q  101 atccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcattat 146  Q
     || ||||||| |||| ||  ||||| ||||||   ||||||||||    
T  36756415 gtctgtgtcgtatccgatgttcgtgtccgtatcaaggcttcattat 36756460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 30527590 - 30527646
Alignment:
Q  25 cgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||| |||||||||||    
T  30527590 cgacacgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34691810 - 34691858
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  34691810 ccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34714222 - 34714270
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  34714222 ccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 18054777 - 18054900
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaatta-ttagctgtgtcgacgtgtcggcat 102  Q
    |||||| ||||||| ||||||||||||||  || |||| |||||| |||||  | | | ||||||| | |||  | |||||||||||||||||||||  |    
T  18054777 gacacgcgtcgtgttcgacaccgacacgacaccaacacatataattacactgcagtttgtgattttctaaaaaaaattagctgtgtcgacgtgtcggtgt 18054876  T
Q  103 ccgtgtcgtgtccggtgcccgtgt 126  Q
    || |||||||||||||| ||||||    
T  18054877 ccctgtcgtgtccggtgtccgtgt 18054900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 12668400 - 12668490
Alignment:
Q  7 acgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||| ||| | ||||||||||  ||||||| |||||| ||||| |||||| | ||||| |||||||||||| | ||||| ||||||    
T  12668400 acgtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtc 12668490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 22084804 - 22084909
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataa--tcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggca 101  Q
    ||||||||| ||||||||||| |||||||  ||| ||| |||||  | ||||| |||||||||||||| ||||||||||| | |||| || ||||| | |    
T  22084804 gacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactgaattatatgattttctcaaattattaacggtgttgatgtgtccgta 22084903  T
Q  102 tccgtg 107  Q
    ||||||    
T  22084904 tccgtg 22084909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 37411250 - 37411304
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||| |||||||||||| |||||| ||||||| ||||||||||||| ||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 4882678 - 4882763
Alignment:
Q  12 tcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||||||||||   |||||| | |||| ||||| |||||||| ||||| |||||| |||||| || ||||||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtc 4882763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 11223842 - 11223922
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||||||||||| ||| ||  ||||||| | |||| ||||| |||||| | ||||| ||||| |||||||||||||    
T  11223842 gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 14996228 - 14996284
Alignment:
Q  35 ccgacacctataatcacactaaattatatga-ttttatcaaattattagctgtgtcg 90  Q
    ||||||| | |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  14996228 ccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcg 14996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 18276575 - 18276467
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    |||||||  ||||| ||||| |||||  ||||||| ||||||||||||| |||||| | | || |  || || |||||||||||| ||||||  ||||||    
T  18276575 ccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatcc 18276476  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  18276475 gtgcttcat 18276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 31018644 - 31018560
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||||||||||||| ||||||||| || ||||||| | ||||||||||| |||| | |||||| |  ||| |||||| |||||||    
T  31018644 ccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtg 31018560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 37419831 - 37419735
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||  |||||||||||||||||||||  ||| ||| | |||| ||||| |||| | ||||||| |||||||||| ||  ||||| ||||||    
T  37419831 tcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtc 37419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 23355002 - 23355089
Alignment:
Q  37 gacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||||| ||  ||||||||||||| ||||| ||||||||||| |||||||  | ||||||  |||||||| ||||| ||| ||||    
T  23355002 gacacctatgattgcactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtcccgtgtccgt 23355089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 19536402 - 19536492
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgt 124  Q
    ||||||| | |||| ||||| |||||| ||||||| | ||||||||||| ||||||| ||||||    |||||||||||||||||| ||||    
T  19536402 ccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 19536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 30335461 - 30335363
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| |||||||||||| | ||||| |||||||||||| ||||||| ||||   |  ||||||||||||| |    |||||| ||||||||||||||||    
T  30335461 taattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccgtatccgtgcttcat 30335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 31284080 - 31283994
Alignment:
Q  57 attatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| ||||||| ||||||||||||| |||||| |||||  |  | |||||  ||||||||| |||||| |||||| |||||||||    
T  31284080 attatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcat 31283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 36409641 - 36409711
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtc 114  Q
    ||||| |||||||||||| ||||||| ||||||||| ||| |||||| | |||  | ||||||||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 6045892 - 6045969
Alignment:
Q  6 cacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagc 83  Q
    |||| ||||||||||||||| |||| |  ||||||| |||||  ||  | |||| |||||||||||||||||||||||    
T  6045892 cacgggtcgtgtccgacaccaacaccacaccgacacatataactactttgaattgtatgattttatcaaattattagc 6045969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 15972950 - 15972921
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  15972950 tcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 18631471 - 18631512
Alignment:
Q  102 tccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||||||||||||||||| |||||| |||||| |||||||||    
T  18631471 tccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcat 18631512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 21782832 - 21782885
Alignment:
Q  44 ataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||| ||||| |||||| ||||||| ||||||||||||| |||||| ||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 21782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 23718080 - 23717999
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| |||||| ||||| |||||| ||| ||| ||||||||||||| ||||||  ||||| |  |||||||| ||||||    
T  23718080 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 23717999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 24105752 - 24105671
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| |||||| ||||| |||||| ||| ||| ||||||||||||| ||||||  ||||| |  |||||||| ||||||    
T  24105752 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 24105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24975297 - 24975385
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||| ||| ||||| ||||| |||||||  ||||| | |||| | ||||| ||||||| |||||| ||||||||||||| ||||||    
T  24975297 tcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28596546 - 28596517
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  28596546 tcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 30298467 - 30298536
Alignment:
Q  50 acactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    ||||| |||||| | ||||||| ||||||||| | |||||||||||||||| | ||| ||||||| ||||    
T  30298467 acactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtg 30298536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 30404855 - 30404936
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    ||||||| | |||| ||||| |||||| ||||||| ||||||||||| | |||||| |||||| |  |||||||| ||||||    
T  30404855 ccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 36096349 - 36096442
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||||||||||| ||||||||  ||||||  |||||| |||||  ||| | ||||||| | |||   |||||||||||| ||||||    
T  36096349 gacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgattttctaaaaaatttagctgtgtcggcgtgtc 36096442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19614263 - 19614183
Alignment:
Q  9 gtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||||| ||||||||||||||  | ||||| |||||| ||||| ||||  | ||||||  |||||||||||| |||||    
T  19614263 gtgtcgtgttcgacaccgacacgatactgacacatataattacactgaatttaaagatttttccaaattattagcagtgtc 19614183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 23058433 - 23058557
Alignment:
Q  21 acaccgacacgagtccgacacctataatcacactaaattatatgattttat-caaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    ||||||||||||  ||||||| | |||| |||||  ||||| ||||||| | ||||||||||  ||||| | ||||||    ||||||||||||| |||     
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggta 23058532  T
Q  120 cccgtgtacgtatccgtgcttcatt 144  Q
     |||||| ||| |||||||||||||    
T  23058533 tccgtgtccgtgtccgtgcttcatt 23058557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 40361767 - 40361867
Alignment:
Q  43 tataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttca 142  Q
    |||||| |||||||||||| | ||||| |||||||||||   |||||   ||||| | ||| ||||||||| ||||  |||||| ||||||| |||||||    
T  40361767 tataattacactaaattatgtaattttttcaaattattaatagtgtcatagtgtccgtatctgtgtcgtgttcggtatccgtgtccgtatccatgcttca 40361866  T
Q  143 t 143  Q
    |    
T  40361867 t 40361867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 9952 - 9844
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| |||||| |||||  ||| ||||||||| | |||  ||||||||||||| ||||||||  ||| |||||||||||||| |||||| |||||||    
T  9952 ccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatcc 9853  T
Q  135 gtgcttcat 143  Q
    |||||||||    
T  9852 gtgcttcat 9844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 263347 - 263475
Alignment:
Q  5 acacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatcc 104  Q
    |||||||||||||| |||||||||||||  | ||||| |||||| ||||| |||||| || |||| ||||||||||||| |||| ||| |||| |  |||    
T  263347 acacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtcc 263446  T
Q  105 gtgtcgtgtccggtgcccgtgtacgtatc 133  Q
    ||||||| ||| ||| |||||| ||||||    
T  263447 gtgtcgtatccagtgtccgtgtccgtatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 46726 - 46628
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    |||| ||||| |||||| ||||||| ||||||||||| |||||||| ||||||    ||||||||||||||| || |||||| ||||||||||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcat 46628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 53268 - 53154
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    ||||||||||||| |||||||||||||||||   ||||||| |||||| ||||| |||||| ||||||| |||||||||| || || ||| |||||| |     
T  53268 tcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag- 53170  T
Q  101 atccgtgtcgtgtccggtg 119  Q
       ||||||||||||||||    
T  53169 ---cgtgtcgtgtccggtg 53154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44496 - 44584
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||||||||| |||||| ||||||||||||  ||||||| |||||| ||||| |||||| ||||||| ||||||| ||||| |||||    
T  44496 tcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 467 - 577
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||| |||| | ||||||| ||||||||||||| |||||| ||| || |  |||||| ||||| ||||| |||||| |||||||    
T  467 ccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatcc 566  T
Q  135 gtgcttcatta 145  Q
    |||||||||||    
T  567 gtgcttcatta 577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 20239 - 20137
Alignment:
Q  22 caccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcc 121  Q
    |||||||||||  | ||||| | |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||    |||||||||||||||||| |    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 20140  T
Q  122 cgt 124  Q
    |||    
T  20139 cgt 20137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 130536 - 130428
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatcc 134  Q
    ||||||| | |||| ||||| |||||| ||||||| ||||| ||||| |||||||| | ||||    |||||||||||||||||| |||||| |||||||    
T  130536 ccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatcc 130437  T
Q  135 gtgcttcat 143  Q
     ||||||||    
T  130436 atgcttcat 130428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 68226 - 68293
Alignment:
Q  14 gtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattatta 81  Q
    |||| ||||||||| ||||  | |||||||||||| | |||||||||||||||||| |||||||||||    
T  68226 gtgttcgacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattatta 68293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 71813 - 71715
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatga--ttttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||| |||||||||||||||||||  | |||||   |||| ||||| |||| | |||  |||| |||||||||||||||||||| ||||||    
T  71813 tcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtc 71715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 178833 - 178908
Alignment:
Q  45 taatcacactaaattat-atgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtg 119  Q
    |||| ||||| |||||| |||||||| |||||||||||| ||||||| |||||| |  ||||||||||||||||||    
T  178833 taattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtg 178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 225274 - 225381
Alignment:
Q  36 cgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccg 135  Q
    |||||| |||||| ||| |  ||||| | ||||| ||||||||||| |||||||| |||||| |  |||||||||||||||||| ||||||  || ||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 225373  T
Q  136 tgcttcat 143  Q
    || |||||    
T  225374 tgtttcat 225381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 3332 - 3262
Alignment:
Q  73 aaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccggtgcccgtgtacgtatccgtgcttcat 143  Q
    ||||| |||||  |||||||||||| | ||||||||||||||||||| ||||||   ||||||||||||||    
T  3332 aaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 9721 - 9799
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattag 82  Q
    |||| |||||||||| |||||| ||||||  ||||||| |||||| ||||| |||||  ||||||| ||||||||||||    
T  9721 gacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 21119 - 20990
Alignment:
Q  13 cgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtg 112  Q
    |||||| |||||||||||||  ||||||| |||||| | ||  | |||| ||||||| ||||||||||| | |||||  | |||| |  |||||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtg 21020  T
Q  113 tccggtgcccgtgtacgtatccgtgcttca 142  Q
    || |||| |||||| |||||| ||| ||||    
T  21019 tctggtgtccgtgttcgtatctgtgtttca 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3820 - 3909
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    ||||||| ||||||||||||||||| ||||||  | ||||| | |||| ||||| |||||| ||||||| | ||||||||| | ||||||    
T  3820 tcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcg 3909  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 13476 - 13365
Alignment:
Q  8 cgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtg 107  Q
    |||||||||||||||||||||||     |||| | | ||||  |||| |||||| ||||||| |||||||||||| ||||||| |||||| |  ||||||    
T  13476 cgtgtcgtgtccgacaccgacac-----cgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 13382  T
Q  108 tcgtgtccggtgcccgt 124  Q
    || | ||||||| ||||    
T  13381 tcatctccggtgtccgt 13365  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 21851 - 21962
Alignment:
Q  8 cgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtg 107  Q
    |||||||||||||||||||||||     |||| | | ||||  |||| |||||| ||||||| |||||||||||| ||||||| |||||| |  ||||||    
T  21851 cgtgtcgtgtccgacaccgacac-----cgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 21945  T
Q  108 tcgtgtccggtgcccgt 124  Q
    || | ||||||| ||||    
T  21946 tcatctccggtgtccgt 21962  T

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Target: scaffold0103 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 51855 - 51803
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 51803  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7319 - 7378
Alignment:
Q  38 acacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| |||||| |||||||||||| |||||||  ||||||||||| ||||||| ||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 7054 - 7096
Alignment:
Q  52 actaaattatatgattttatcaaattattagctgtgtcgacgt 94  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  7054 actaaattatgtaattttttcaaattattagctgtgtcgacgt 7096  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 1698 - 1636
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||| | |||||| ||||||    
T  1698 ccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 70332 - 70270
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||| |||||| ||||| |||||| | ||||| ||||||||||| |||||||||| ||||    
T  70332 ccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtc 70270  T

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Target: scaffold0050; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 70355 - 70326
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  70355 tcggacacgtgtcgtgtccgacaccgacac 70326  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 17754 - 17808
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||| ||||||    
T  17754 ccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtc 17808  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5018 - 5047
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacac 30  Q
    ||||||||||||||||||||||||||||||    
T  5018 tcggacacgtgtcgtgtccgacaccgacac 5047  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8606 - 8695
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||||| |||||||||| ||||||||||  ||||||  | |||| | ||  |||||| |||| || |||||||||||| |||||||    
T  8606 tcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcg 8695  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 25773 - 25834
Alignment:
Q  35 ccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgt 96  Q
    ||||||| |||||| |||||||||||| ||||||| || |||||||| | ||||| ||||||    
T  25773 ccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtcaacgtgt 25834  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 8754 - 8629
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggc 100  Q
    |||||||||| ||  ||| ||||  |||||||  ||||||| |||||| | ||| || ||| |||||||   ||||||||||  ||||||||||||| |     
T  8754 tcggacacgtatcacgtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagt 8655  T
Q  101 atccgtgtcgtgtccggtgcccgtgt 126  Q
     ||| |||||||||||||| ||||||    
T  8654 gtccatgtcgtgtccggtgtccgtgt 8629  T

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Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 8042 - 8002
Alignment:
Q  57 attatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  8042 attatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 5970 - 6082
Alignment:
Q  4 gacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatc 103  Q
    |||||||||||||| ||||||||| ||||  ||||||| |||||| |||||  ||| | ||||||| | |||  ||||| ||| ||| ||||||||  ||    
T  5970 gacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagatgtatcggcgtgtcggtgtc 6069  T
Q  104 cgtgtcgtgtccg 116  Q
    | || ||||||||    
T  6070 catgccgtgtccg 6082  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6400 - 6312
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtc 89  Q
    |||||| ||||||||| || ||||||| ||||  ||||||| |||||| ||| | ||||||   ||||| ||||||||||||| |||||    
T  6400 tcggacccgtgtcgtgccccacaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 14574 - 14522
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| ||||| |||||| ||||||| |||||||||||| ||||||| ||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 23485 - 23393
Alignment:
Q  24 ccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtcggcatccgtgtcgtgtccg 116  Q
    |||||||||  ||||||| |||||| ||||| |||||| ||||||| |  | |||||| |||||||| |||||| |  || ||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23599 - 23531
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgatttt 69  Q
    |||||||| | |||||||||||||||| ||||  | ||||| |||||| ||||| |||||| |||||||    
T  23599 tcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttt 23531  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 33378 - 33430
Alignment:
Q  45 taatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||| ||||| |||||| | ||||| |||||||||||||||||||| ||||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 84944 - 85040
Alignment:
Q  1 tcggacacgtgtcgtgtccgacaccgacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcgacgtgtc 97  Q
    |||||||||||| |||| ||||| ||||| ||  ||||||  |||||| ||||  |||||||||||||| | |||||| |||  |||||| ||||||    
T  84944 tcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaattagtagtggtgtcggcgtgtc 85040  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 135308 - 135372
Alignment:
Q  26 gacacgagtccgacacctataatcacactaaattatatgattttatcaaattattagctgtgtcg 90  Q
    |||||||  ||||||| |||||| ||||  |||||| ||||||| ||||||||||||| ||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcg 135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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